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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9134#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1476 fasta sequence
[TCATCATTTTTAGAAGTACAACTCAATCTAGACTATCGACGAAAATGGGATGATAAGATTGTAGAATTGCATTGTATTACACCGAATAACGATACACATATTAAAGATTTAGATATTATTCGTTGGGTTGTACGTTTTCCATTTCCTATGGTCGATCGAGAATATGTTTACGTACGACGTTGGTGGATTCAACCTACTGAATTTTCCTTGAATACGGAGAAATCACTTGCATCTCATAAAGATAATTCTTCAGAATCGATTCCTTTATCTCAAGACAATACAACTAAGAACATTTCTACTAGACGCTATGCCTATCTAATTTCTCGATGCTCAGCAGATTTCAAAGAAAAATGTACCCAATCTTCTGATATTTCTTCTGTAAAGTCTTCGTGGGAAAACATAAAGAAACGGGGTCTTGTTCAAGTTCATGAATATCATTCTGAAATGTTAATTGAGTCACATGGAGAATTCAACCAAAATGGACTGAATTACTATTTAATTTATTATGATGATCCCTGTCTTCCGATTAATGGATCGCCAATAAAATTATTTTCTGTCAGAGCTATTGAAGAATTTATGACAAAACTTCATAAAGCTGCATTGCAATTATGCCATGTAGGCCTACCTATTGGTATTCGCCCCATAATATATGATAATAATAGTAATACTACTACTAATAATAACACCAATACTACTGATAGCGAAATAAAACTTGACCCANATCCAGATCT-ATTCAATGCATCAAAGTTAATATCACCATCATCATCATCATCATCATCATCAACATCACCTACAACGAAGAAACAATTTAGTGGTATAAAACTCA-ATTCTTATTTCTTCACTGATCGTCATCCTTCAGAATTGAATAACAATTACATTGATTCAACTGCAGCCGCCTTATCCTAGTAATAGCACCTCCTTTCTTTTGTTTATTTTTTTGCTCTGTTTAACTGTAGACTCTTCTC-TTTTTTTCTAGTGAAAGAAATAT-GTTTACTTCACTATTCCTTCCTG-TTTTTTTTCAAGTATTTATGAATAAGACAGATG-GTTGGTATGTTTATTACTACTGCTGCCACCACCACTAAGGAGAGTACCTTTTCATGCTCTCAATAAAAAGAACTTTCGCTTTATTTTTAAACATACATACTGATTATACACTTTGAAATGTGACTTTGATGAAAAACATTTGTAATCTTGTGATTGAAGCATATTTGGGATAGTCCCTATGTAGTGTTTGTTTTGTCATTTAGATCTACTCACATTATGTCTACTCAATTGTATCTAGACACAGAAATAGTTAGATGAATATATGTATACATTGATATATATATATATATATATCAATGTATATATGTAGAGAGCTAACATCAATGTATTCACTTTTCATGTTGCTTTTCTTTGTATATGCATATTCTGTATATTATTTATTTATATAAAAATGTAAGTACAATTGTGTATAGTGATTAATATAAGAAGTTA]
[-] EMBL CD181781 [TCATCATTTTTAGAAGTACAACTCAATCTAGACTATCGACGAAAATGGGATGATAAGATTGTAGAATTGCATTGTATTACACCGAATAACGATACACATATTAAAGATTTAGATATTATTCGTTGGGTTGTACGTTTTCCATTTCCTATGGTCGATCGAGAATATGTTTACGTACGACGTTGGTGGATTCAACCTACTGAATTTTCCTTGAATACGGAGAAATCACTTGCATCTCATAAAGATAATTCTTCAGAATCGATTCCTTTATCTCAAGACAATACAACTAAGAACATTTCTACTAGACGCTATGCCTATCTAATT ]
[+] EMBL CD080094 [ GTTGTACGTTTTCCATTTCCTATGGTCGATCGAGAATATGTTTACGTACGACGTTGGTGGATTCAACCTACTGAATTTTCCTTGAATACGGAGAAATCACTTGCATCTCATAAAGATAATTCTTCAGAATCGATTCCTTTATCTCAAGACAATACAACTAAGAACATTTCTACTAGACGCTATGCCTATCTAATTTCTCGATGCTCAGCAGATTTCAAAGAAAAATGTACCCAATCTTCTGATATTTCTTCTGTAAAGTCTTCGTGGGAAAACATAAAGAAACGGGGTCTTGTTCAAGTTCATGAATATCATTCTGAAATGTTAATTGAGTCACATGGAGAATTCAACCAAAATGGACTGAATTACTATTTAATTTATTATGATGATCCCTGTCTTCCGATTAATGGATCGCCAATAAAATTATTTTCTGTCAGAGCTATTGAAGAATTTATGACAAAACTTCATAAAGCTGCATTGCAATTATGCCATGTAGGCCTACCTATTGGTATTCGCCCCATAATATATGATAATAATAGTAATACTACTACTAATAATAACACCAATACTACTGATAGCGAAATAAAACTTGACCCANATCCAGATCT ATTCAATGCATCAAAGTTAATATCACCATCATCATCATCATCATCATCATCAACATCACCTACAACGAAGAAACAATTTAGTGGTAAAAAACTCA ATTCTTATTTCTTCACTGATCG ]
[+] EMBL CD079444 [ GTTGTACGTTTTCCATTTCCTATGGTCGATCGAGAATATGTTTACGTACGACGTTGGTGGATTCAACCTACTGAATTTTCCTTGAATACGGAGAAATCACTTGCATCTCATAAAGATAATTCTTCAGAATCGATTCCTTTATCTCAAGACAATACAACTAAGAACATTTCTACTAGACGCTATGCCTATCTAATTTCTCGATGCTCAGCAGATTTCAAAGAAAAATGTACCCAATCTTCTGATATTTCTTCTGTAAAGTCTTCGTGGGAAAACATAAAGAAACGGGGTCTTGTTCAAGTTCATGAATATCATTCTGAAATGTTAATTGAGTCACATGGAGAATTCAACCAAAATGGACTGAATTACTATTTAATTTATTATGATGATCCCTGTCTTCCGATTAATGGATCGCCAATAAAATTATTTTCTGTCAGAGCTATTGAAGAATTTATGACAAAACTTCATAAAGCTGCATTGCAATTATGCCATGTAGGCCTACCTATTGGTATTCGCCCCATAATATATGATAATAATAGTAATACTACTACTAATAATAACACCAATACTACTGATAGCGAAATAAAACTTGACCCANATCCAGATCT ATTCAATGCATCANAGTTAATATCACCATCATCATCATCATCATCATCATCAACATCACCTANCACGAA ]
[+] EMBL CD111365 [ TTTCCTTGAATACGGAGAAATCACTTGCATCTCATAAAGATAATTCTTCAGAATCGATTCCTTTATCTCAAGACAATACAACTAAGAACATTTCTACTAGACGCTATGCCTATCTAATTTCTCGATGCTCAGCAGATTTCAAAGAAAAATGTACCCAATCTTCTGATATTTCTTCTGTAAAGTCTTCGTGGGAAAACATAAAGAAACGGGGTCTTGTTCAAGTTCATGAACATCATTCTGAAATGTTAATTGAGTCACATGGAGAATTCAACCAAAATGGACTGAATTACTATTTAATTTATTATGATGATCCCTGTCTTCCGATTAATGGATCGCCAATAAAATTATTTTCTGTCAGAGCTATTGAAGAATTTATGACAAAACTTCATAAAGCTGC TTTCAATTATGCCATGTAGGCCTACCTATTGGTATTCGn ]
[+] EMBL AI740403 [ TAAAGCTGCATTGCAATTATGCCATGTAGGCCTACCTATTGGTATTCGCCCCATAATATATGATAATAATAGTAATACTACTACTAATAATAACACCAATACTACTGATAGCGAAATAAAACTTGACCCAAATCCAGATCT ATTCAATGCATCAAAGTTAATATCAC CATCATCATCATCATCAACATCACCTACAACGAAGAAACAATTTAGTGGTATACNACTCA ATTCTTATTTCTTCACTGATCGTCATCCTTCAGAATTGGGTCNCAATTACATTGATTCAACTGCAGCCGCCTTATCCTAGTAATAGCACCTCCTTTCTTTTGTTTATTTTTTTGCTCTGTTTAACTGTAGACTCTTCTCTTTTTTTTCTAGTGAAAGAAATATNGTTTACTTtca ]
[+] EMBL AI026171 [ TAAAGCTGCATTGCAATTATGCCATGTAGGCCTACCTATTGGTATTCGCCCCATAATATATGATAATAATAGTAATACTACTACTAATAATAACACCAATACTACTGATAGCGAAATAAAACTTGACCCAAATCCAGATCTAAACCAATGCATCAAAGTTAATATCAC CATCATCATCATCATCAACATCACCTACAACGAAGAAACAATTTAGTGGTTTTGCCCACATATTCTTATTTCTTCACTGATCGTCATCCTTCAGAATTGCATAACAATTACATTGATTCAACTGCAGCCGCCTTATCCTAGTAATAGCACCCTCTTTCTTTTGTTTATTTTTTTGCTCTGTTTAACTGTAGACTCTTCTC TTTTTTTCTAGTGAAAGAAATAT GTTTACTTCACTATTCCTTCCTGTTTTTTTTTCAAGTATTTATGAATAAGACAGATGAATTGGTATGTTTATTACTACTGCTGCCACCACCACTAAGGGGGGTA CTTTTCcagccc ]
[-] EMBL CD073714 [ CTTCACTGATCGTCATCCTTCAGAATTGAATAACAATTACATTGATTCAACTGCAGCCGCCTTATCCTAGTAATAGCAATTCCTTTCTTTTGTTTATTTTTTTGCTCTGTTTAACTGTAGACTCTTCTC TTTTTTTCTAGTGAAAGAAATAT GTTTACTTCACTATTCCTTCCTG TTTTTTTTCAAGTATTTATGAATAAGACAGATG GTTGGTATGTTTATTACTACTGCTGCCACCACCACTAAGGAGAGTACCTTTTCATGCTCTCAATAAAAAGAACTTTCGCTTTATTTTTAAACATACATACTGATTATACACTTTGAAATGTGACTTTGATGAAAAACATTTGTAATCTTGTGATTGAAGCATATTTGGGATAGTCCCTATGTAGTGTTTGTTTTGTCATTTAGATCTACTCACATTATGTCTACTCAATTGTATCTAGACACAGAAATAGTTAGATGAATATATGTATACATTGATATATATATATATATATATCAATGTATATATGTAGAGAGCTAACATCAATGTATTCACTTTTCATGTTGCTTTTCTTTGTATATGCATATTCTGTATATTATTTATTTATATAAAAATGTAAGTACAATTGTGTATAGTGATTAATATAAGAAGTTA]
[+] EMBL CD090446 [ TTCACTGATCGTCATGCTTCAGAAATGAATAACAATTACATTGATTCAACTGCAGCCGCCTTATCCTAGTAATAGCAATTCCTTTCTTTTGTTTATTTTTTTGCTCTGTTTAACTGTAGACTCTTCTC TTTTTTTCTAGTGAAAGAAATAT GTTTACTTCACTATTCCTTCCTG TTTTTTTTCAAGTATTTATGAATAAGACAGATG GTTGGTATGTTTATTACTACTGCTGCCACCACCACTAAGGAGAGTACCTTTTCATGCTCTCAATAAAAAGAACTTTCGCTTTATTTTTAGACATACATACTGATTATACACTTTGAAATGTGACTTTGATGAATAACATTTG ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||