These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9145#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 866 fasta sequence [ATCTAATCTAGTTTTATTATATTTGCATTTGGATTTTTATCAAATACAATTACGTATAAAAGTTGTAAATCAATAGATTCCTTTCATTCTTTTGTTTTTTTTACTTTTAAAATCAACATTAGAGGAAGAAGAAAAAGGAAAGGCGCTTGCTTTCCACATGATTTTTATTGAACTATGTTGTTATTTTTATTCATGAGTAAGAAACCCTCAAAATAAGGCATGGACATTAATTCATATCACAAAAACTGGAATTACGAATAAGATAATTCGAAGTTATTATTATTATCAAACACATGTTTCTACAGCGATTGCAATCCCCATACCACCACCTATACATAAAGCAGCTACACCTCGTCGAACAACAGTTGAATGATCACCGCCACCACCACTGACATCATGATCTTTACAAAGCCGCTGTAATGTATGGACTAATGTAACCAATATACGAGCACCACTACATCCAACTGGATGACCTAATGCAATTGCACCACCGGATATATTCAATTTCTCTGGTAATATACACAATTCAGTAGCAATAGCAATACATTGAGAAGCAAAAGCTTCATTGATTTCAAATACATCAACGGATTCCATCTTCCAACCAATTTTAGATAATAATCCCCGAATAGCG-TAAATAGGACCA-AGGCCCATTAGTTCCGGTTCGAGACCAGCTTGATGCCAGCCTACAATGCGAGCCAGAGGACGACGAGAACCAAGTTTTGATAGTTGATCACCACGACAAAGTAATAAAATCGCTGCACCATCATTTACTCCACTGGCATTACCTGCTGTAACCGTTCCATGATTTGTATCTTCATGAAATGCAGGTCGTAATTTTGATAATTTAGCTAAAGTAGTATCTGGAC] [+] EMBL CD073536 [ATCTAATCTACTTTTATTATATTTGCATTTGGATTTATATCAAATACAATTACCTATAAAAGTGGTAAATCAATAGATTCCGTTCATTCTTTTGTTTTTTTTACTTTGAAAATCAACAATAGAGGAAGAAAAAAAAGGAAAGGCGCTTGCTTTCCACATGATTTTTATTGAACTATGTTGTTATTTTTATTCATGAGTAAGAAACCCTCAAAATAAGGCATGGACATTAATTCATATCACAAAAACCGGAATTACGAATAAGATAATTCCAAGTTATTATTATTATCAAACACATGTTTCTACAGCGATGGCTATCCCCATACCACCACCTATACATAAAGCAGCTACACCTGGTCGAACAACAGTTGAATGATCACCGCCACCACCACTGACATCATGATCTTTACAAAGCCGCTGTAATGTATGGACTAATGTAACCAATATACCAGCACCACTACATCCAACTGGATGACCTAATGCAATTGCACCACCGGATATATTCAATTTCTCTGGTAATATACACA ] [+] EMBL AI976210 [ TAGTTTTATTATATTTGCATTTGCATTTTTATCAAATACAATTACGTATAAAAGTTGTAAATCAATAGATTCCTTTCATTCTTTTGTTTTTTTTACTTTTAAAATCAACATTAGAGGAAGAAGAAAAAGGAAAGGCGCTTGCTTTCCACATGATTTTTATTGAACTATGTTGTTATTTTTATTCATGAGTAAGAAACCCTCAAAATAAGGCATGGACATTAATTCATATCACAAAAACTGGAATTACGAATAAGATAATTCGAAGTTATTATTATTATTAAACACATGTTTCTACAGCGATTGCAATCCCCATACCACCACCTATACATAAAGCAGCTACACCTCGTCGAACAACAGTTGAATGATCACCGCCACCACCACTGACATCATGATCTTTACAAAGCCGCTGTAATGTATGGACTAATGTAACCAATATACGAGCACCACTACATCCAACTGGATGACCTAATGCAATTGCACCACCGGATATATTCAATTTCTCTGGTAATATACACAATTCAGTAGCAATAGCAATACATTGAGAAGCAAAAGCTTCATTGATTTCAAATACATCAACGGATTCCATCTTCCAACCAATTGTAGAAAATAATCCCCGAATAGCG TA ] [+] EMBL AW017094 [ TAGTTTTATTATATTTGCATTTGTATTTTTATCAAATACAATTACGTATAAAAGTTGTAAATCAATAGATTCCTTTCATTCTTTTGTTTTTTTTACTTTTAAAATCAACATTAGAGGAAGAAGAAAAAGGAAAGGCGCTTGCTTTCCACATGATTTTTATTGAACTATGTTGTTATTTTTATTCATGAGTAAGAAACCCTCAAAATAAGGCATGGACATTAATTCATATCACAAAAACTGGAATTACGAATAAGATAATTCGAAGTTATTATTATTATTAAACACATGTTTCTACAGCGATTGCAATCCCCATACC ] [-] EMBL CD079083 [ TACGAATAAGATAATTCGAAGTTATTATTATTATCAAACACATGTTTCTACAGCGATTGCAATCCCCATACCACCACCTATACATAAAGCAGCTACACCTCGTCGAACAACAGTTGAATGATCACCGCCACCACCACTGACATCATGATCTTTACAAAGCCGCTGTAATGTATGGACTAATGTAACCAATATACGAGCACCACTACATCCAACTGGATGACCTAATGCAATTGCACCACCGGATATATTCAATTTCTCTGGTAATATACACAATTCAGTAGCAATAGCAATACATTGAGAAGCAAAAGCTTCATTGATTTCAAATACATCAACGGATTCCATCTTCCAACCAATTTTAGATAATAATCCCCGAATAGCG TAAATAGGACCA AGGCCCATTGGTTCCGGTTCGAGACCAGCTTGATGCCAGCCTACAATGCGAGCCAGAGGACGACGAGAACCAAGTTTTGATAGTTGATCACCACGACAAAGTAATAAAATCGCTGCACCATCATTTACTCCACTGGCATTACCTGCTGTAACCGTTCCATGATTTGTATCTTCATGAAATGCAGGTCGTAATTTTGATAATTTAGCTAAAGTAGTATCTGG ] [-] EMBL CD156402 [ AGCAGCTACACCTCGTCGAACAACAGTTGAATGATCACCGCCACCACCACTGACATCATGATCTTTACAAAGCCGCTGTAATGTATGGACTAATGTAACCAATATACGAGCACCACTACATCCAACTGGATGACCTAATGCAATTGCACCACCGGATATATTCAATTTCTCTGGTAATATACACAATTCAGTAGCAATAGCAATACATTGAGAAGCAAAAGCTTCATTGATTTCAAATACATCAACGGATTCCATCTTCCAACCAATTTTAGATAATAATCCCCGAATAGCG TAAATAGGACCA AGGCCCATTAGTTCCGGTTCGAGACCAGCTTGATGCCAGCCTACAATGCGAGCCAGAGGACGACGAGAACCAAGTTTTGATAGTTGATCACCACGACAAAGTAATAAAATCGCTGC ] [+] EMBL CD187500 [ TCTTTACAAAGCCGCTGTAATGTATGGACTAATGTAACCAATATACGAGCACCACTACATCCAACTGGATGACCTAATGCAATTGCACCACCGGATATATTCAATTTCTCTGGTAATATACACAATTCAGTAGCAATAGCAATACATTGAGAAGCAAAAGCTTCATTGATTTCAAATACATCAACGGATTCCATCTTCCAACCAATTTTAGATAATAATCCCCGAATAGCG TAAATAGGACCA AGGCCCATTAGTTCCGGTTCGAGACCAGCTTGATGCCGGCCTACAATGCGAGCCAGAGGACGACGAGAACCAAGTTTTGATAGTTGATCACCACGACAAAGTAATAAAATCGCTGCACCATCATTTACTCCACTGGCATTACCTGCTGTAACCGTTCCATGATTTGTATCTTCATGAAATGCAGGTCGTAATTTTGATAATTTAGCTAAAGTAGTATCTGAAC] [-] EMBL CD083838 [ CATCCAACTGGATGACCTAATGCAATTGCACCACCGGATATATTCAATTTCTCTGGTAATATACACAATTCAGTAGCAATAGCAATACATTGAGAAGCTAAAGCTTCATTGATTTCAAATACATCAACGGATTCCATCTTCCAACCAATTTTAGATAATAATCCCCGAATAGCGCTAAATAGGACCACAGGCCCATTAGTTCCGGTTCGAGACCAGCTTGATGCCAGCATACAATGCGAGC ] [-] EMBL CD130049 [ CCA AG CCATTAGTTCCGGTTCGAGACCAGCTTGATGCCAGCCTACAATGCGAGCCAGAGGACGACGAGAACCAAGTTTTGATAGTTGATCACCACGACAAAGTAATAAAATCGCTGCACCATCAT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||