These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9146#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1448 fasta sequence [AACACATATATAATTAACAGATCAGCCAAAATGGAAAAGATGTATTTAAAAAGAATCGAAAAACCTAGTCCAAAGAAATATACAACAGAATATTGATCTTAAAGTATACAAAGGATTAATCAGACAACAAGAGTAAAACAAAACTAAATCACAGTTCAGGCTTAGTGCATACGCTTTACAAGCAATTATTTACAAAAGTCTATTATAAACAAAAGAACCAAAAATATATGAACACCGATACGCACCATAAGCAACTCCAGCAACTAAAGAAATCAAAACTCCTCGCAACGACCACTTAAATATGCGCCAGGAAAGAGGAGGTTCAAGTAGTACACATAATTCATGTTTTTTGATTGTGTTTACTGTTGACCAGACTTTGCGGATTCCAGCCACATGACCTATTCCAACAACAGCGACAACAACTCTTGGCAATATATTGGTCGGTGGCCAGTGTGAACAACAACTCAGATGCAGAGAAGAGGGGTTATTAAGGAGATTATCTTGTTCAGAACTGTTAGCGATTCCATCCAGGGGACAGTCATTAGACTGATCAATATTTTTACGATGTTGCACCACAGACTCTTCAATATTTGATGAATTATGTATCTCAGAAGTAAAATTCGTCTTTATTGCTTGTGCTTTCAAAAATTCTTCCATTCCAGTAGCCTCCCAGATGGAGCGAGCTAGATATTGATCTCGTTCATCTAATAATATTCTTGTTAATTCTGGGTGTTCACCAGCCATGGAAACTAACAGTTTTTCCAGAAAATCTGTTTTCTTCATCTCCTCAATTTGTTCTTTCGTAACAGGTTGGAAACTGAATAGAAGAGCAATAAAAAACTTGAGCTTAGTCCACGGACCCAAAGCCTCCAAAGCTCTATAAAGTGTAATGTTTACAGGACGGTCTCCTAGAACAACGTGACAGTGAGGCTGCTTCATCGCCTCTTTAGCGGCGGCTCTGAACTCTCCACCAGGTGCCATTCCAAGAGTATCAACCAAATAGCCACTTAATCGAAGCAAGAGATAATGCAAAACACCTGAACTGACACCATGCTTTCCAATGATCGATGTAATGCTAATGTCCTTAAGTTGCTTTTTAATATTTACTTCGTCCATTGTCAAAGTCTGACTCCGATTAGGACAGAGTTCCAGCATAACAATATCAGGATGCACCAGCTCCATAAACTTTTAGACGTCAGC--AATACTTTCTTCACTGAAATGTGCGGTTCCGATCAGATACACTTTGCACTGATTTTCACACTCAATAACACTGACAGTTTCAGGCAATTCAAAATGCTTTTTCCTTTGATTTCGTACCCATTCAATGTGATGCAAGAACAATGAATTCGAGTCCATACAATCACCGACTGATACATTATCTATTTCACCGTCATATTCAAAGTCATCTATACATTCGTCGT-ATCCATACGCGTGGATTTACGTAACAC] [+] EMBL CD073523 [AACACATATATAATTAACAGATCAGCCAAAATGGAAAAGATGTATTTAAAAAGAATCGAAAAACCTAGTCCAAAGAAATATACAACAGAATATTGATCTTAAAGTATACAAAGGATTAATCAGACAACAAGAGTAAAACAAAACTAAATCACAGTTCAGGCTTAGTGCATACGCTTTACAAGCAATTATTTACAAAAGTCTATTATAAACAAAAGAACCAAAAATATATGAACACCGATACGCACCATAAGCAACTCCAGCAACTAAAGAAATCAAAACTCCTCGCAACGACCACTTAAATATGCGCCAGGAAAGAGGAGGTTCAAGTAGTACACATAATTCATGTTTTTTGATTGTGTTTACTGTTGACCAGACTTTGCGGATTCCAGCCACATGACCTATTCCAACAACAGCGACAACTACTCTTGGCAATATATTGGTCGGTGGCCAGTGTGAACAACAACTCAGATGCAGAGAAGAGGGGTTATTAAGGAGATTATCTTGTTCAGAACTGTTAGCGATTCCATCCAGGGGACAGTCATTAGACTGATCAATATTTTTACGATGTTGCACCACAGACTCTTCAATATTTGATGAATTATGTATCTCAGAAG ] [+] EMBL CD140530 [ ACTAAATCACAGTTCAGGCTTAGTGCATACGCTTTACAAGCAATTATTTACAAAAGTCTATTATAAACAAAAGAACCAAAAATATATGAACACCGATACGCACCATAAGCAACTCCAGCAACTAAAGAAATCAAAACTCCTCGCAACGACCACTTAAATATGCGCCAGGAAAGAGGAGGTTCAAGTAGTACACATAATTCATGTTTTTTGATTGTGTTTACTGTTGACCAGACTTTGCGGATTCCAGCCACATGACCTATTCCAACAACAGCGACAACAACTCTTGGCAATATATTGGTCGGTGGCCAGTGTGAACAACAACTCAGATGCAGAGAAGAGGGGTTATTAAGGAGATTATCTTGTTCAGAACTGTTAGCGATTCCATCCAGGGGACAGTCATTAGACTGATCAATATTTTTACGATGTT ] [-] EMBL CD123962 [ CACATGACCTATTCCAACAACAGCGACAACAACTCTTGGCAATATATTGGTCGGTGGCCAGTGTGAACAACAACTCAGATGCAGAGAAGAGGGGTTATTAAGGAGATTATCTTGTTCAGAACTGTTAGCGATTCCATCCAGGGGACAGTCATTAGACTGATCAATATTTTTACGATGTTGCACCACAGACTCTTCAATATTTGATGAATTATGTATCTCAGAAGTAAAATTCGTCTTTATTGCTTGTGCTTTCAAAAATTCTTCCATTCCAGTAGCCTCCCAGATGGAGCGAGCTAGATATTGATCTCGTTCATCTAATAATA ] [-] EMBL CD123975 [ CACATGACCTATTCCAACAACAGCGACAACAACTCTTGGCAATATATTGGTCGGTGGCCAGTGTGAACAACAACTCAGATGCAGAGAAGAGGGGTTATTAAGGAGATTATCTTGTTCAGAACTGTTAGCGATTCCATCCAGGGGACAGTCATTAGACTGATCAATATTTTTGCGATGTTGCACCACAGACTCTTCAATATTTGATGAATTATGTATCTCAGAAGTAAGATTCGTCTTTATTGCTTGTGCTTTCAAAAATTCTTCCATTCCAGTAGCCTCCCAGATGGAGCGAGCTAGATATTGATCTCGTTCATCTAATAATA ] [-] EMBL CD079068 [ GTTCAGAACTGTTAGCGATTCCATNCAGGGGACAGTCATTAGACTGATCAATATTTNTACGATGTTGCACCACAGACTCTTCAATATTTGATGAATTATGTATCTCAGAAGTAAAATTCGTCTTTATTGCTTGTGCTTTCAAAAATTCTTCCATTCCAGTAGCCTCCCAGATGGAGCGAGCTAGATATTGATCTCGTTCATCTAATAATATTCTTGTTAATTCTGGGTGTTCACCAGCCATGGAAACTAACAGTTTTTCCAGAAAATCTGTTTTCTTCATCTCCTCAATTTGTTCTTTCGTAACAGGTTGGAAACTGAATAGAAGAGCAATAAAAAACTTGAGCTTAGTCCACGGACCCAAAGCCTCCAAAGCTCTATAAAGTGTAATGTTTACAGGACGGTCTCCTAGAACAACGTGACAGTGAGGCTGCTTCATCGCCTCTTTAGCGGCGGCTCTGAACTCTCCACCAGGTGCCATTCCAAGAGTATCAACCAAATAGCCACTTAATCGAAGCAAGAGATAATGCAAAACACCTGAACTGACACCATGCTTTCCAATGATCGATGTAATGCTAATGTCCTTAAGTTGCTTTTTAA ] [+] EMBL CD125766 [ TTACAGGACGGTCTCCTAGAACAACGTGACAGTGAGGCTGCTTCATCGCCTCTTTAGCGGCGGCTCTGAACTCTCCACCAGGTGCCATTCCAAGAGTATCAAACAAATAGTCACTTAATCGAAGCAAGAGATAATGCAAAACACCTGAACTGACACCATGCTTTCGAATTATCGATGTAATACTAATGTCCTTAAGTAGCTTATTAATATTTACTTCGTCCATTGTCAAAGTCTGACTCCGATTAGGACAGAGTTCCAGCATAACAATATCAGGATGCACCAGCTCCATAAACTTTTAGACGTCAGC CATACTTTCTTCACTGAAATGTGCGGTTCCGATCAGATACACTTTGCACTGATTTACACACTCAATAACACTGACAGTTTCAGGCAATTCAAAATGCTTTTTCC ] [-] EMBL CD193525 [ ATGTCCTTAAGTTGCTTTTTAATATTTTCTTCGTCCATTGTCAAAGTCTGACTCCGATTTGGACAGAGTTCCAGCATAACAATATCAGGATGTACCAGCTCCATAACCTTTTTGACGTCAGC AATACTTTCTTCACTGAAATGTGCGGTTCCGATCAGATACACTTTGCACTGATTTTCACACTCAATAACACTGACAGTTTCAGGCAATTCAAAATGCTTTTTCCTTTGATTTCGTACCCATTCAATGTGATGCAAGAACAATGAATTCGAGTCCATACAATCACCGACTGATACATTATCTATTTCACCGTCATATTCAAAGTCATCTATACATTCGTCGT ATCCATACGCGTGGATTTACGTAACA ] [-] EMBL CD122810 [ TTTGAG CGTCAGCAAAATACTTTCTTCACTGAAATGCGCAGTTCCGATCAGATACACTTTGCAGTGATTTTCACACTCAATAACACTGACAGTTTCAGGCAATTCAAAATGCTTATTCCTTTGATTTTGTACCCATTCAATGTGATGCAAGAACAATGCATTCGAGTCCATACAATCACCGACTGATACATTATCTATTTCACCGTCATATACAAAGTCATCTATACATTCGTCGTCATCCATACGCGTGGATTTACGTAACgc] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||