cluster # 9236

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Schistosoma mansoni
cluster # 9236 cluster # 9236 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9236#0 length = 1834 sequences # 7

consensus_9236#1 length = 593 sequences # 1
consensus_9236#2 length = 132 sequences # 1

consensusID : consensus_9236#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1834
fasta sequence

                              [TGGCTCATGTGCATTTGGTGAAAGAAACTATTCTGCTTCGTCAGCGTTCCACAAACAGTCGATCTAGTCGTGCTAATTCTTGTTCTTCAGGTACACTTAGCCTTATCGATATGGTGCCACTTTTACATATGTGTATTGATTCCACATCTCATTCAGAACTTGATACTAATAGATCTTCAACTACTGATCATCTCTCACACTTGTATTTTGATCTTGGTGGACCTCAGTCCCCTGATGTCACTACTGCAGGAGAGGATTTAACAGTTACAGCATGTACTTCAACTAATTCGGCAACTGCATCTCAAAGTCCATTTTCTAAAAATCCTATAATTGAATTCGCAGATAAATATCGTCGTGGATTAAGTCAAGTTCTTCGTCATCATGGAGCAAATATAGGTGAATCACCTTTCGCTGTATTTTTGGCTTATCCCCGAGTGCTTGATTTTGACGTTAAGCGTCGCTTTTTCCGA-CAACAACTACAATCATTATCTAATCGTTCAACATCCAGTAACCGATATGATGATGATCCAATAACTGTCTCAAGGGATCGAATATTCGAAGATAGTTATGCCAGACTACACAGAAGATCTGTGAGTGAATGGAAACATAAATTTGTGATCCGCTTCCAAAACGAAGAGGGTCAAGATGCCGGCGGTCCATTGAGAGAATGGTTTTTATTAATGAGTCGAGAAATTTTCAATCCAAATTACTGCCTTTTCCGCGTCTCTCCCGCAGATCGAGTCACATACACAATTAATCCAAGCTCTTACATTAATAGTAATCATTTGTCTTATTTCAAATTTGTCGGACGTTTTATTGCTAAAGCTATCAATGATAATAAACTTCTGGAATGCTATTTCACACGAGCATTTTACAAACATATCTTGGGAGTACCTGTCAGATGCTCTGATTTAGAAAGTGAAGATTATGAATTTTTCAAAGGATTGGAATTTCTCTTAAGTCATGATGTATCTGATTTGGGTTATGAACTAACCTTTAGTACCGAGCTAAATGAATTTGGCAAAACAGACACTCGTGACCTCATTGAAAACGGTCGAAATGTAGCAGTTACTGAGAATAACAAAAAAGAATATGTTCGTTTAGTTTGTCAAGAACGTATGACTGGTGCTATACGTCAACAACTTGATGCTTTCTTAAGAGGATTCTATGATATCATTCCTAAACGTATGATTAGTATATTTAATGAAACAGAAATTAG-ATTACTGATTAGTGGTTTGCCTAATATTGATTTAGTTGATTTAAAAGCTAATACAACTTATTCAAAATACCAACCGAATTCACCACAAATTGAATGGTTTTGGCAAGCATTAGAATCATTTGATCAAGAAGATTTAGCACGTTTTCTACAATTCGTCACTGGTACTAGTAAAGTACCATTAGGTGGATTTATGAATTTAGAAGGAATGCATGGTCCTACTAAATTTCAAATTAGTCGTGCATCTGTTTCAAGTACTAATCATTTACCGTCTGCACATACTTGTTTTAACACACTTGTGTTGCCAGCATATGAAAGCTACGAACAGCTACGATCAAGACTTTTGATGGCTATACGTGAATGTAGTGAGGGCTATGGAATGGCTTAATTCGCATACTATGATCAACATACAAGATATGTTTTTATGATTGTATCTTGAGTTCAACATTTATGACCTTCCTTTTTTGTTTATTTTTATTCTCTCTGGNCTTAT-CCAAAAACA-AAT-ATACTGGCAGCTGCCTGGCTTTTTACTGTGATGTGATATCATTATGATGTGGGATTTATGTGCATATGAATGTTGATATTGCAGAATAATGAAAGCAATCAAGTTGTGTTTTT]

[-] EMBL CD064501             [TGGCTCATGTGCATTTGGTGAAAGAAACTATTCTGCTTCGTCAGCGTTCCACAAACAGTCGATCTAGTCGTGCTAATTCTTGTTCTTCAGGTACACTTAGCCTTATCGATATGGTGCCACTTTTACATATGTGTATTGATTCCACATCTCATTCAGAACTTGATACTAATAGATCTTCAACTACTGATCATCTCTCACACTTGTATTTTGATCTTGGTGGACCTCAGTCCCCTGATGTCACTACTGCAGGAGAGGATTTAACAGTTACAGCATGTACTTCAACTAATTCGGCAACTGCATCTCAAAGTCCATTTTCTAAAAATCCTATAATTGAATTCGCAGATAAATATCGTCGTGGATTAAGTCAAGTTCTTCGTCATCATGGAGCAAATATAGGTGAATCACCTTTCGCTGTATTTTTGGCTTATCCCCGAGTGCTTGATTTTGACATTAAGCGTCGCTTTTTCCGANCAACAACTACAATCATTATCTAATCGTTCAACATCCAGTAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AW017207             [                                                                                                                                                                                                                                                                                                                                           TGAATTCGCAGATAAATATCGTCGTGGATTAAGTCAAGTTCTTCGTCATCATGGAGCAAATATAGGTGAATCACCTTTCGCTGTATTTTTGGCTTATCCCCGAGTGCTTGATTTTGACGTTAAGCGTCGCTTTTTCCGA CAACAACTACAATCATTATCTAATCGTTCAACATCCAGTAACCGATATGATGATGATCCAATAACTGTCTCAAGGGATCGAATATTCGAAGATAGTTATGCCAGACTACACAGAAGATCTGTGAGTGAATGGAAACATAAATTTGTGATCCGCTTCCAAAACGAAGAGGGTCAAGATGCCGGCGGTCCATTGAGAGAATGGTTTTTATTAATGAGTCGAGAAATTTTCAATCCAAATTACTGCCTTTTCCGCGTCTCTCCCGCAGATCGAGTCACATACACAATTAATCCAAGCTCTTACATTAATAGTAATCATTTGTCTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD063329             [                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTTGACGTTAAGCGTCGCTTTTTCCGA CAACAACTACAATCATTATCTAATCGTTCAACATCCAGTAACCGATATGATGATGATCCAATAACTGTCTCAAGGGATCGAATATTCGAAGATAGTTATGCCAGACTACACAGAAGATCTGTGAGTGAATGGAAACATAAATTTGTGATCCGCTTCCAAAACGAAGAGGGTCAAGATGCCGGCGGTCCATTGAGAGAATGGTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD065227             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGAGTGAATGGAAACATAAATTTGTGATCCGCTTCCAAAACGAAGAGGGTCAAGATGCCGGCGGTCCATTGAGAGAATGGTTTTTATTAATGAGTCGAGAAATTTTCAATCCAAATTACTGCCTTTTCCGCGTCTCTCCCGCAGATCGAGTCACATACACAATTAATCCAAGCTCTTACATTAATAGTAATCATTTGTCTTATTTCAAATTTGTCGGACGTTTTATTGCTAAAGCTATCAATGATAATAAACTTCTGGAATGCTATTTCACACGAGCATTTTACAAACATATCTTGGGAGTACCTGTCAGATGCTCTGATTTAGAAAGTGAAGATTATGAATTTTTCAAAGGATTGGAATTTCTCTTAAGTCATGATGTATCTGATTTGGGTTATGAACTAACCTTTAGTACCGAGCTAAATGAATTTGGCAAAACAGACACTCGTGACCTCATTGAAAACGGTCGAAATGTAGCAGTTACTGAGAATAACAAAAAAGAATATGTTCGTTTAGTTTGTCAAGAACGTATGACTGGTGCTATACGTCAACAACTTGATGCTTTCTTAAGAGGATTCTATGATATCATTCCTAAACGTATGATTAGTATATTTAATGAAACAGAAATTAG ATTACTGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD113330             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCTCTTAAGTCATGATGTATCTGATTTGGGTTATGAACTAACCTTTAGTACCGAGATAAATGAATTTGGCAAAACAGACACTCGTGACCTCATTGAAAACGGTCGAAATGTAGCAGTTACTGAGAATAACAAAAAAGAATATGTTCGTTTAGTTTGTCAAGAACGTATGACTGGTGCTATACGTCAACAACTTGATGCTTTCTTAAGAGGATTCTATGACATCATTCCTAAACGTATGATTAGTATATTTAATG AACAAGAATTAGAATTACTGATTAGTGGTTTGCCTAATATTGATTTAGTTGATTTAAAAGCTAATACAACTTATTCAAAATACCAACCGAATTCACCACAAATTGAATGGTTTTGGCAAGCATTAGAATCATTTGATCAAGAAGATTTAGCACGTTTTCTACAATTCGTCACTGGTACTAGTAAAGTACCATTAGGTGGATTTATGAATTTAGAAGGAATGCATGGTCCTACTAAATTTCAAATTAGTCGTGCATCTGTTTCAAGTACTAATCATTTACCGTCTGCACATACTTGTTTTAACACACTTGTGTTGCCAGCATATGAAAGCTACGAACAGCTACGATCAAGACTTTTGATGGCTATACGTGAATGTAGTGAGGGCTATGG                                                                                                                                                                                                                                                   ]
[+] EMBL CD134169             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AATGGTTTTGGCAAGCATTAGAATCATTTGATCAAGAAGATTTAGCACGAGTTCTACAATTCGTCACTGGTACTAGTAAAGTACCATTAGGTGGATTTATGAATTTAGAAGGAATGCATGGTCCTACTAAATTTCAAATTAGTCGTGCATCTGTTTCAAGTACTAATCATTTACCGTCTGCACATACTTGTTTTAACACACTTGTGTTGCCAGCATATGAAAGCTACGAACAGCTACGATCAAGACTTTTGATGGCTATACGTGAATGTAGTGAGGGCTATGGAATGGCTTAATTCGCATACTATGATCAACATACAAGATATGTTTTTATGATTGTATCTTGAGTTCAACATTTATGACCTTCCTTTTTTGTTTATTTTTATTCTCTCTGGNCTTAT CCAAAAACAGAAT ATACTGGCAGCTGCCTGGCTTTTTACTGTGATGTGATATCA                                                                        ]
[-] EMBL CD178566             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGTTTCAAGTACTAATCATTTACCGTCTGCACATACTTGTTTTAACACACTTGTGTTGCCAGCATATGAAAGCTACGAACAGCTACGATCAAGACTTTTGATGGCTATACGTGAATGTAGTGAGGGCTATGGAATGGCTTAATTCGCATACTATGATCAACATACAAGATATGTTTTTATGATTGTATCTTGTGTTCAACATTTATGTCCTTCCTTTTTTGTTTATTTTTATTCTCTCTGTCTTTATCCCAAAAACA AATAATACTGGCAGCTGCCTGGCTTTTTACTGTGATGTGATATCATTATGATGTGGGATTTATGTGCATATGAATGTTGATATTGCAGAATAATGAAAGCAATCAAGTTGTGTTTTT]




>consensus_9236#0
TGGCTCATGTGCATTTGGTGAAAGAAACTATTCTGCTTCGTCAGCGTTCCACAAACAGTC
GATCTAGTCGTGCTAATTCTTGTTCTTCAGGTACACTTAGCCTTATCGATATGGTGCCAC
TTTTACATATGTGTATTGATTCCACATCTCATTCAGAACTTGATACTAATAGATCTTCAA
CTACTGATCATCTCTCACACTTGTATTTTGATCTTGGTGGACCTCAGTCCCCTGATGTCA
CTACTGCAGGAGAGGATTTAACAGTTACAGCATGTACTTCAACTAATTCGGCAACTGCAT
CTCAAAGTCCATTTTCTAAAAATCCTATAATTGAATTCGCAGATAAATATCGTCGTGGAT
TAAGTCAAGTTCTTCGTCATCATGGAGCAAATATAGGTGAATCACCTTTCGCTGTATTTT
TGGCTTATCCCCGAGTGCTTGATTTTGACGTTAAGCGTCGCTTTTTCCGACAACAACTAC
AATCATTATCTAATCGTTCAACATCCAGTAACCGATATGATGATGATCCAATAACTGTCT
CAAGGGATCGAATATTCGAAGATAGTTATGCCAGACTACACAGAAGATCTGTGAGTGAAT
GGAAACATAAATTTGTGATCCGCTTCCAAAACGAAGAGGGTCAAGATGCCGGCGGTCCAT
TGAGAGAATGGTTTTTATTAATGAGTCGAGAAATTTTCAATCCAAATTACTGCCTTTTCC
GCGTCTCTCCCGCAGATCGAGTCACATACACAATTAATCCAAGCTCTTACATTAATAGTA
ATCATTTGTCTTATTTCAAATTTGTCGGACGTTTTATTGCTAAAGCTATCAATGATAATA
AACTTCTGGAATGCTATTTCACACGAGCATTTTACAAACATATCTTGGGAGTACCTGTCA
GATGCTCTGATTTAGAAAGTGAAGATTATGAATTTTTCAAAGGATTGGAATTTCTCTTAA
GTCATGATGTATCTGATTTGGGTTATGAACTAACCTTTAGTACCGAGCTAAATGAATTTG
GCAAAACAGACACTCGTGACCTCATTGAAAACGGTCGAAATGTAGCAGTTACTGAGAATA
ACAAAAAAGAATATGTTCGTTTAGTTTGTCAAGAACGTATGACTGGTGCTATACGTCAAC
AACTTGATGCTTTCTTAAGAGGATTCTATGATATCATTCCTAAACGTATGATTAGTATAT
TTAATGAAACAGAAATTAGATTACTGATTAGTGGTTTGCCTAATATTGATTTAGTTGATT
TAAAAGCTAATACAACTTATTCAAAATACCAACCGAATTCACCACAAATTGAATGGTTTT
GGCAAGCATTAGAATCATTTGATCAAGAAGATTTAGCACGTTTTCTACAATTCGTCACTG
GTACTAGTAAAGTACCATTAGGTGGATTTATGAATTTAGAAGGAATGCATGGTCCTACTA
AATTTCAAATTAGTCGTGCATCTGTTTCAAGTACTAATCATTTACCGTCTGCACATACTT
GTTTTAACACACTTGTGTTGCCAGCATATGAAAGCTACGAACAGCTACGATCAAGACTTT
TGATGGCTATACGTGAATGTAGTGAGGGCTATGGAATGGCTTAATTCGCATACTATGATC
AACATACAAGATATGTTTTTATGATTGTATCTTGAGTTCAACATTTATGACCTTCCTTTT
TTGTTTATTTTTATTCTCTCTGGNCTTATCCAAAAACAAATATACTGGCAGCTGCCTGGC
TTTTTACTGTGATGTGATATCATTATGATGTGGGATTTATGTGCATATGAATGTTGATAT
TGCAGAATAATGAAAGCAATCAAGTTGTGTTTTT

consensusID : consensus_9236#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 593
fasta sequence

                              [ATGTCACTACTGCAGGAGAGGATTTAACAGTTACAGCATGTACTTCAACTAATTCGGCAACTGCATCTCAAAGTCCATTTTCTAAAAATCCTATAATTGAATTCGCAGATAAATATCGTCGTGGATTAAGTCAAGTTCTTCGTCATCATGGAGCAAATATAGGTGAATCACCTTTCGCTGTATTTTTGGCTTATCCCCGAGTGCTTGATTTTGACGTTAAGCGTCGCTTTTTCCGACAACAACTACAATCATTATCTAATCGTTCAACATCCAGTAACCGATATGATGATGATCCAATAACTGTCTCAAGGGATCGAATATTCGAAGATAGTTATGCCAGACTACACAGAAGATCTGTGAGTGAATGGAAACATAAATTTGTGATCCGCTTCCAAAGTGAGTTTTGTTATATTGATTTTGTTGTTTTATTATGCTTGTCAAGCGTATAGCATATGTGTGATCTTATCCTTATTAACTCAGACATTTCAGAGCTCATTTTCTCTCTTTGGTCAATTTCAGACATTATTTTTTTCAATTAATAACTAGTTTGCTGTTATCGATATTTCTCTAATTTGAAATAAAACATTTTAGGT]

[-] EMBL CD154862             [ATGTCACTACTGCAGGAGAGGATTTAACAGTTACAGCATGTACTTCAACTAATTCGGCAACTGCATCTCAAAGTCCATTTTCTAAAAATCCTATAATTGAATTCGCAGATAAATATCGTCGTGGATTAAGTCAAGTTCTTCGTCATCATGGAGCAAATATAGGTGAATCACCTTTCGCTGTATTTTTGGCTTATCCCCGAGTGCTTGATTTTGACGTTAAGCGTCGCTTTTTCCGACAACAACTACAATCATTATCTAATCGTTCAACATCCAGTAACCGATATGATGATGATCCAATAACTGTCTCAAGGGATCGAATATTCGAAGATAGTTATGCCAGACTACACAGAAGATCTGTGAGTGAATGGAAACATAAATTTGTGATCCGCTTCCAAAGTGAGTTTTGTTATATTGATTTTGTTGTTTTATTATGCTTGTCAAGCGTATAGCATATGTGTGATCTTATCCTTATTAACTCAGACATTTCAGAGCTCATTTTCTCTCTTTGGTCAATTTCAGACATTATTTTTTTCAATTAATAACTAGTTTGCTGTTATCGATATTTCTCTAATTTGAAATAAAACATTTTAGGT]




>consensus_9236#1
ATGTCACTACTGCAGGAGAGGATTTAACAGTTACAGCATGTACTTCAACTAATTCGGCAA
CTGCATCTCAAAGTCCATTTTCTAAAAATCCTATAATTGAATTCGCAGATAAATATCGTC
GTGGATTAAGTCAAGTTCTTCGTCATCATGGAGCAAATATAGGTGAATCACCTTTCGCTG
TATTTTTGGCTTATCCCCGAGTGCTTGATTTTGACGTTAAGCGTCGCTTTTTCCGACAAC
AACTACAATCATTATCTAATCGTTCAACATCCAGTAACCGATATGATGATGATCCAATAA
CTGTCTCAAGGGATCGAATATTCGAAGATAGTTATGCCAGACTACACAGAAGATCTGTGA
GTGAATGGAAACATAAATTTGTGATCCGCTTCCAAAGTGAGTTTTGTTATATTGATTTTG
TTGTTTTATTATGCTTGTCAAGCGTATAGCATATGTGTGATCTTATCCTTATTAACTCAG
ACATTTCAGAGCTCATTTTCTCTCTTTGGTCAATTTCAGACATTATTTTTTTCAATTAAT
AACTAGTTTGCTGTTATCGATATTTCTCTAATTTGAAATAAAACATTTTAGGT

consensusID : consensus_9236#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 132
fasta sequence

                              [ATGTGTTCTTATTTATAAAACAACAAAAATTGACTACTCCCAGCATGTGAACTGCCAAATGCGTGAGAAAAAAAGACAAGAAAATTTATCTCCCATTTAATAATTATTTTCATATTTAACTAAATCGTTTAA]

[+] EMBL CD097532             [ATGTGTTCTTATTTATAAAACAACAAAAATTGACTACTCCCAGCATGTGAACTGCCAAATGCGTGAGAAAAAAAGACAAGAAAATTTATCTCCCATTTAATAATTATTTTCATATTTAACTAAATCGTTTAA]




>consensus_9236#2
ATGTGTTCTTATTTATAAAACAACAAAAATTGACTACTCCCAGCATGTGAACTGCCAAAT
GCGTGAGAAAAAAAGACAAGAAAATTTATCTCCCATTTAATAATTATTTTCATATTTAAC
TAAATCGTTTAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9236#0      TGGCTCATGTGCATTTGGTGAAAGAAACTATTCTGCTTCGTCAGCGTTCCACAAACAGTC 60
consensus_9236#1      ------------------------------------------------------------
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      GATCTAGTCGTGCTAATTCTTGTTCTTCAGGTACACTTAGCCTTATCGATATGGTGCCAC 120
consensus_9236#1      ------------------------------------------------------------
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      TTTTACATATGTGTATTGATTCCACATCTCATTCAGAACTTGATACTAATAGATCTTCAA 180
consensus_9236#1      ------------------------------------------------------------
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      CTACTGATCATCTCTCACACTTGTATTTTGATCTTGGTGGACCTCAGTCCCCTGATGTCA 240
consensus_9236#1      ------------------------------------------------------ATGTCA 6
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      CTACTGCAGGAGAGGATTTAACAGTTACAGCATGTACTTCAACTAATTCGGCAACTGCAT 300
consensus_9236#1      CTACTGCAGGAGAGGATTTAACAGTTACAGCATGTACTTCAACTAATTCGGCAACTGCAT 66
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      CTCAAAGTCCATTTTCTAAAAATCCTATAATTGAATTCGCAGATAAATATCGTCGTGGAT 360
consensus_9236#1      CTCAAAGTCCATTTTCTAAAAATCCTATAATTGAATTCGCAGATAAATATCGTCGTGGAT 126
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      TAAGTCAAGTTCTTCGTCATCATGGAGCAAATATAGGTGAATCACCTTTCGCTGTATTTT 420
consensus_9236#1      TAAGTCAAGTTCTTCGTCATCATGGAGCAAATATAGGTGAATCACCTTTCGCTGTATTTT 186
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      TGGCTTATCCCCGAGTGCTTGATTTTGACGTTAAGCGTCGCTTTTTCCGACAACAACTAC 480
consensus_9236#1      TGGCTTATCCCCGAGTGCTTGATTTTGACGTTAAGCGTCGCTTTTTCCGACAACAACTAC 246
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      AATCATTATCTAATCGTTCAACATCCAGTAACCGATATGATGATGATCCAATAACTGTCT 540
consensus_9236#1      AATCATTATCTAATCGTTCAACATCCAGTAACCGATATGATGATGATCCAATAACTGTCT 306
consensus_9236#2      ----------------------------------ATGTGTTCTTATTTATAAAACAAC-- 24
                                                        ** ** *  *  *   * ***     

consensus_9236#0      CAAGGGATCGAATATTCGAAGATAGTTATGCCAGACTACACAGAAGATCTGTGAGTGAAT 600
consensus_9236#1      CAAGGGATCGAATATTCGAAGATAGTTATGCCAGACTACACAGAAGATCTGTGAGTGAAT 366
consensus_9236#2      --AAAAATTGACTACTCCCAG-----CATGT-GAACTGCC--AAATGCGTGAGAAAAAAA 74
                        *   ** ** ** **  **      ***    *** *    **    ** **   ** 

consensus_9236#0      GGAAACATAAATTTGTGATCCGCTTCCAAAACGAAGAGGGTCAAGATGCCGGCGGTCCAT 660
consensus_9236#1      GGAAACATAAATTTGTGATCCGCTTCCAAAGTGAGTTTTGTTATATTGATTTTGTTGTTT 426
consensus_9236#2      GACAAGA-AAATTTATCTCCCATTT----AATAATTATTTTCATATTTAACTAAATCGTT 129
                      *  ** * ****** *   **  **    *   *      * *   *        *   *

consensus_9236#0      TGAGAGAATGGTTTTTATTAATGAGTCGAGAAATTTTCAATCCAAATTACTGCCTTTTCC 720
consensus_9236#1      T------ATTATGCTTGTCAAGCGTATAGCATATGTGTGATC----TTAT--CCTTATTA 474
consensus_9236#2      TAA--------------------------------------------------------- 132
                      *                                                           

consensus_9236#0      GCGTCTCTCCCGCAGATCGAGTCACATACACAATTAATCCAAGCTCTTACATTAATAGTA 780
consensus_9236#1      ACTCAGACATTTCAGAGC---TCATTTTCTCTCTTTGGTCAATTTCAGACATTATT---- 527
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      ATCATTTGTCTTATTTCAAATTTGTCGGACGTTTTATTGCTAAAGCTATCAATGATAATA 840
consensus_9236#1      -TTTTTCAATTAATAACTAGTTTGCTG------TTATCGATATTTCTCTAATTTGAAATA 580
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      AA-CTTCTGGAATGCTATTTCACACGAGCATTTTACAAACATATCTTGGGAGTACCTGTC 899
consensus_9236#1      AAACATTTTAGGT----------------------------------------------- 593
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      AGATGCTCTGATTTAGAAAGTGAAGATTATGAATTTTTCAAAGGATTGGAATTTCTCTTA 959
consensus_9236#1      ------------------------------------------------------------
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      AGTCATGATGTATCTGATTTGGGTTATGAACTAACCTTTAGTACCGAGCTAAATGAATTT 1019
consensus_9236#1      ------------------------------------------------------------
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      GGCAAAACAGACACTCGTGACCTCATTGAAAACGGTCGAAATGTAGCAGTTACTGAGAAT 1079
consensus_9236#1      ------------------------------------------------------------
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      AACAAAAAAGAATATGTTCGTTTAGTTTGTCAAGAACGTATGACTGGTGCTATACGTCAA 1139
consensus_9236#1      ------------------------------------------------------------
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      CAACTTGATGCTTTCTTAAGAGGATTCTATGATATCATTCCTAAACGTATGATTAGTATA 1199
consensus_9236#1      ------------------------------------------------------------
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      TTTAATGAAACAGAAATTAGATTACTGATTAGTGGTTTGCCTAATATTGATTTAGTTGAT 1259
consensus_9236#1      ------------------------------------------------------------
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      TTAAAAGCTAATACAACTTATTCAAAATACCAACCGAATTCACCACAAATTGAATGGTTT 1319
consensus_9236#1      ------------------------------------------------------------
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      TGGCAAGCATTAGAATCATTTGATCAAGAAGATTTAGCACGTTTTCTACAATTCGTCACT 1379
consensus_9236#1      ------------------------------------------------------------
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      GGTACTAGTAAAGTACCATTAGGTGGATTTATGAATTTAGAAGGAATGCATGGTCCTACT 1439
consensus_9236#1      ------------------------------------------------------------
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      AAATTTCAAATTAGTCGTGCATCTGTTTCAAGTACTAATCATTTACCGTCTGCACATACT 1499
consensus_9236#1      ------------------------------------------------------------
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      TGTTTTAACACACTTGTGTTGCCAGCATATGAAAGCTACGAACAGCTACGATCAAGACTT 1559
consensus_9236#1      ------------------------------------------------------------
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      TTGATGGCTATACGTGAATGTAGTGAGGGCTATGGAATGGCTTAATTCGCATACTATGAT 1619
consensus_9236#1      ------------------------------------------------------------
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      CAACATACAAGATATGTTTTTATGATTGTATCTTGAGTTCAACATTTATGACCTTCCTTT 1679
consensus_9236#1      ------------------------------------------------------------
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      TTTGTTTATTTTTATTCTCTCTGGNCTTATCCAAAAACAAATATACTGGCAGCTGCCTGG 1739
consensus_9236#1      ------------------------------------------------------------
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      CTTTTTACTGTGATGTGATATCATTATGATGTGGGATTTATGTGCATATGAATGTTGATA 1799
consensus_9236#1      ------------------------------------------------------------
consensus_9236#2      ------------------------------------------------------------
                                                                                  

consensus_9236#0      TTGCAGAATAATGAAAGCAATCAAGTTGTGTTTTT 1834
consensus_9236#1      -----------------------------------
consensus_9236#2      -----------------------------------