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Schistosoma mansoni
cluster # 9237 cluster # 9237       Sequences # 9       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9237#0 length = 1108 sequences # 9  

consensusID : consensus_9237#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1108
fasta sequence
                              [AGGTGTTTTTTGGCTGAATATGACCGCTAGCGAGGTAGACATCCGTGACTTACAATCAAACGTCCGTAAAGTACTCACTTCTACCAAGGACCCGCTAGAAAAACTCAGATGTCAATGCTTACTGCGTGGAGCGAATGGTATCTATGGATTCGGAAAACAATTTCGTGTCATGGATGACGATGGAAGCAAGTCTTTATCTAAAGAAGAATTCAAGAAGGGCTGCCATGATTTTGGCTGCAACTTGACT-CCAGAGGAGGTTGACGTGCTTTTCAATAGGGTAGATAAAGATGGCAGTGGGACAATAATTTTCGACGAATTTTTACGTGCTTTAAGGCCACCAATGTCGAATTCACGGACAGAAGTTGTTAGGAAGGCATTCAATAAAATGGACAAAACTGGAGACGGGAAAATCACGTTGGATGATCTACGCAACGTGTATCAAGTTAAATATGATGCCAAGTACATATCTGGGAGAGCGACTGAAGATCAAGTTCTAAGAGAGTTTCTAAAAACGTTTGAAAACGAAAAGTCTGTGGATGGTGTCGTCACCTGGGAAGAATTTCTGAATTACTACAGCGGTGTTAGTGCGTCGATAGATTCGGATTCCTATTTCGAACTTATGATGTGGAAGGCATATGGNTTATAAACCCTTACTTTATTTACTCAGAATGCCATGAAATATTATAAATGCGACCTTTTCTGTTGGGAATACTTATTCACTCCAGATATTTTTATTTTTATCTAACAGGATTACTGCACCGAACGTAATATTTTCGAATTACTTCGTTCCTCGATGTTACTAATATCATTGCACTATTTATTGTTGTAGAAAGATTTCACTGAAT-CGTCATGTTCATTTATTTTCAGAAACGCGCTTTGGTTGGTAGTCTTCTAGTCTCTTTCAGGAGTATATAAAAGATTTAGTTGTGTTTCTACTTAATTCTATTTTAAAGGACCATTCATTCTCTTGGTATTTGTCTCCAACTATATGTTAGATATTAGAACTGTTTTGTTTCCTTTACATTACTGTTGTATTCAGGTACTTAATCTCCTGACTCTAGCTATATTGTGCTTGTTCTATCATAAATTTAATAATATTTTGGATGTT]

[+] EMBL CD080273             [AGGTGTTTTTTGGCTGAATATGACCGCTAGCGAGGTAGACATCCGTGACTTACAATCAAACGTCCGTAAAGTACTCACTTCTACCAAGGACCCGCTAGAAAAACTCAGATGTCAATGCTTACTGCGTGGAGCGAATGGTATCTATGGATTCGGAAAACAATTTCGTGTCATGGATGACGATGGAAGCAAGTCTTTATCTAAAGAAGAATTCAAGAAGGGCTGCCATGATTTTGGCTGCAACTTGACT CCAGAGGAGGTTGACGTGCTTTTCAATAGGGTAGATAAAGATGGCAGTGGGACAATAATTTTCGACGAATTTTTACGTGCTTTAAGGCCACCAATGTCGAATTCACGGACAGAAGTTGTTAGGAAGGCATTCAATAAAATGGACAAAACTGGAGACGGGAAAATCACGTTGGATGATCTACGCAACGTGTATCAAGTTAAATATGATGCCAAGTACATATCTGGGAGAGCGACTGAAGATCAAGTTCTAAGAGAGTTTCTAAAAACGTTTGAAAACGAAAAGTCTGTGGATGGTGTCGTCACCTGGGAAGAATTTCTGAATTACTACAGCGGTGTTAGTGCGTCGATAGATTCGGATTCCTATTTCGAACTTATGATGTGGAAGGCATATGGNTTATAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD165865             [                                                                                                          AGATGTCTATGCTTACTGCGTGGAGCGAATGGTATCTATGGATTCGGAAAACAATTTCGTGTCATGGATGACGATGGAAGCAAGTCTTTATCTAAAGAAGAATTCAAGAAGGGCTGCCATGATTTTGGCTGCAACTTGACT CCAGAGGAGGTTGACGTGCTTTTCAATAGGGTTGATAAAGATGGCAGTGGGACAATAATTTTCGACGAATTTTTACGTGCTTTAAGGCCACCAATGTCGAATTCACGGACAGAAGTTGTTAGGAAGGCATTCAATAAAATGGACAAAACTGGAGACGGGAAAATCACGTTGGATGATCTACGCAACGTGTATCAAGTTAAATATGATGCCAAGTACATATCTGGGAGAGCGACTGAAGATCAAGTTCTAAGAAAGTTTCTAAAAACGTTTGAAAACGAAAAGTCTGTGGATGGTGTCGTCACCTGGGAAGAATTTCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD090401             [                                                                                                                                                                                                                                  GATTTGNGCTGCAAC TGACTNCCAGAGGAGGTTGACGTGCTTTTCAATAGGGTAGATAAAGATGGCAGTGGGACAATAATTTTCGACGAATTTTTACGTGCTTTAAGGCCACCAATGTCGAATTCACGGACAGAAGTTGTTAGGAAGGCATTCAATAAAATGGACAAAACTGGAGACGGGAAAATCACGTTGGATGATCTACGCAACGTGTATCAAGTTAAATATGATGCCAAGTACATATCTGGGAGAGCGACTGAAGATCAAGTTCTAAGAGAGTTTCTACAAACGTTCGAAAACGAAAAGTCTGTGGACGGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD144335             [                                                                                                                                                                                                                                                                                                                                                                               TAGGAAGGCATTCAATAAAATGGACAAAACTGGAGACGGGAAAATCACGTTGGATGATCTACGCAACGTGTATCAAGTTAAATATGATGCCAAGTACATATCTGGGAGAGCGACTGAAGATCAAGTTCTAAGAGAGTTTCTAAAAACGTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD064247             [                                                                                                                                                                                                                                                                                                                                                                                                AAATGGACAAAACTGGAGA GGCAAAATCACGTTGGATGATCTACGCAACGTGTATCAAGTTAAATATGATGCCAAGTACATATCTGGGAGAGCGACTGAAGATCAAGTTCTAAGAGAGTTTCTAAAAACGTTTGAAAACGAAAAGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD064042             [                                                                                                                                                                                                                                                                                                                                                                                                       CAAAACTGGAGACGGGAAAATCACGTTGGATGATCTACGCAACGTGTATCAAGTTAAATATGATGCC AGTACATATCTGGGAGAGCGACT AAGATCAAGTTCTAgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD074191             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GATCAAGTTCTAAGAGAGTTTCTAAAAACGTTTGAAAACGAAAAGTCTGTGGATGGTGTCGTCACCTGGGAAGAATTTCTGAATTACTACAGCGGTGTTAGTGCGTCGATAGATTCGGATTCCTATTTCGAACTTATGATGTGGAAGGCATATGGTTTATAAACCCTTACTTTATTTACTCAGAATGCCATGAAATATTATAAATGCGACCTTTTCTGTTGGGAATACTTATTCACTCCAGATATTTTTATTTTTATCTAACAGGATTACTGCACCGAACGTAATATTTTCGAATTACTTCGTTCCTCGATGTTACTAATATCATTGCACTATTTATTGTTGTAGAAAGATTTCACTGAAT CGTCATGTTCATTTATTTTCAGAAACGCGCTTTGGTTGGTAGTCTTCTAGTCTCTTTCAGGAGTATATAAAAGATTTAGTTGTGTTTCTACTTAATTCTATTTTAAAGGACCATTCATTCTCTTGGTATTTGTCTCCAACTATATGTTAGATATTAGAACTGTTTTGTTTCCTTTACATTACTGTTGTATTCAGGTACTTAATCTCCTGACTCTAGCTATATTGTGCTTGTTCTATCATAAATTTAATAATATTT        ]
[-] EMBL AA999337             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      acCTGAATCCGTCATGTTCA TTATTTTCAGAAACGCGCTTTGGTTGGTAGTCTTCTAGTCTCTTTCAGGAGTATATAAAAGATTTAGTTGTGTTTCTACTTAATTCTATTTTAAAGGACCATTCATTCTCTTGGTATTTGTCTCCAACTATATGTTAGATATTAGAACTGTTTTGTTTCCTTTACATTACTGTTGTATTCAGGTACTTAATCTCCTGACTCTAGCTATATTGTGCTTGTTCTATCATACTTTTAATAATATTTTGGATGTT]
[+] EMBL CD135901             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TACTTAATTCTATTTTAAAGGACCATTCATTCTCTTGGTATTTGTCTCCAACTATATGTTAGATATTAGAACTGTTTTGTTTCCTTTACATTACTGCTGTATTCA                                                                      ]


>consensus_9237#0 AGGTGTTTTTTGGCTGAATATGACCGCTAGCGAGGTAGACATCCGTGACTTACAATCAAA CGTCCGTAAAGTACTCACTTCTACCAAGGACCCGCTAGAAAAACTCAGATGTCAATGCTT ACTGCGTGGAGCGAATGGTATCTATGGATTCGGAAAACAATTTCGTGTCATGGATGACGA TGGAAGCAAGTCTTTATCTAAAGAAGAATTCAAGAAGGGCTGCCATGATTTTGGCTGCAA CTTGACTCCAGAGGAGGTTGACGTGCTTTTCAATAGGGTAGATAAAGATGGCAGTGGGAC AATAATTTTCGACGAATTTTTACGTGCTTTAAGGCCACCAATGTCGAATTCACGGACAGA AGTTGTTAGGAAGGCATTCAATAAAATGGACAAAACTGGAGACGGGAAAATCACGTTGGA TGATCTACGCAACGTGTATCAAGTTAAATATGATGCCAAGTACATATCTGGGAGAGCGAC TGAAGATCAAGTTCTAAGAGAGTTTCTAAAAACGTTTGAAAACGAAAAGTCTGTGGATGG TGTCGTCACCTGGGAAGAATTTCTGAATTACTACAGCGGTGTTAGTGCGTCGATAGATTC GGATTCCTATTTCGAACTTATGATGTGGAAGGCATATGGNTTATAAACCCTTACTTTATT TACTCAGAATGCCATGAAATATTATAAATGCGACCTTTTCTGTTGGGAATACTTATTCAC TCCAGATATTTTTATTTTTATCTAACAGGATTACTGCACCGAACGTAATATTTTCGAATT ACTTCGTTCCTCGATGTTACTAATATCATTGCACTATTTATTGTTGTAGAAAGATTTCAC TGAATCGTCATGTTCATTTATTTTCAGAAACGCGCTTTGGTTGGTAGTCTTCTAGTCTCT TTCAGGAGTATATAAAAGATTTAGTTGTGTTTCTACTTAATTCTATTTTAAAGGACCATT CATTCTCTTGGTATTTGTCTCCAACTATATGTTAGATATTAGAACTGTTTTGTTTCCTTT ACATTACTGTTGTATTCAGGTACTTAATCTCCTGACTCTAGCTATATTGTGCTTGTTCTA TCATAAATTTAATAATATTTTGGATGTT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)