These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9237#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1108 fasta sequence [AGGTGTTTTTTGGCTGAATATGACCGCTAGCGAGGTAGACATCCGTGACTTACAATCAAACGTCCGTAAAGTACTCACTTCTACCAAGGACCCGCTAGAAAAACTCAGATGTCAATGCTTACTGCGTGGAGCGAATGGTATCTATGGATTCGGAAAACAATTTCGTGTCATGGATGACGATGGAAGCAAGTCTTTATCTAAAGAAGAATTCAAGAAGGGCTGCCATGATTTTGGCTGCAACTTGACT-CCAGAGGAGGTTGACGTGCTTTTCAATAGGGTAGATAAAGATGGCAGTGGGACAATAATTTTCGACGAATTTTTACGTGCTTTAAGGCCACCAATGTCGAATTCACGGACAGAAGTTGTTAGGAAGGCATTCAATAAAATGGACAAAACTGGAGACGGGAAAATCACGTTGGATGATCTACGCAACGTGTATCAAGTTAAATATGATGCCAAGTACATATCTGGGAGAGCGACTGAAGATCAAGTTCTAAGAGAGTTTCTAAAAACGTTTGAAAACGAAAAGTCTGTGGATGGTGTCGTCACCTGGGAAGAATTTCTGAATTACTACAGCGGTGTTAGTGCGTCGATAGATTCGGATTCCTATTTCGAACTTATGATGTGGAAGGCATATGGNTTATAAACCCTTACTTTATTTACTCAGAATGCCATGAAATATTATAAATGCGACCTTTTCTGTTGGGAATACTTATTCACTCCAGATATTTTTATTTTTATCTAACAGGATTACTGCACCGAACGTAATATTTTCGAATTACTTCGTTCCTCGATGTTACTAATATCATTGCACTATTTATTGTTGTAGAAAGATTTCACTGAAT-CGTCATGTTCATTTATTTTCAGAAACGCGCTTTGGTTGGTAGTCTTCTAGTCTCTTTCAGGAGTATATAAAAGATTTAGTTGTGTTTCTACTTAATTCTATTTTAAAGGACCATTCATTCTCTTGGTATTTGTCTCCAACTATATGTTAGATATTAGAACTGTTTTGTTTCCTTTACATTACTGTTGTATTCAGGTACTTAATCTCCTGACTCTAGCTATATTGTGCTTGTTCTATCATAAATTTAATAATATTTTGGATGTT] [+] EMBL CD080273 [AGGTGTTTTTTGGCTGAATATGACCGCTAGCGAGGTAGACATCCGTGACTTACAATCAAACGTCCGTAAAGTACTCACTTCTACCAAGGACCCGCTAGAAAAACTCAGATGTCAATGCTTACTGCGTGGAGCGAATGGTATCTATGGATTCGGAAAACAATTTCGTGTCATGGATGACGATGGAAGCAAGTCTTTATCTAAAGAAGAATTCAAGAAGGGCTGCCATGATTTTGGCTGCAACTTGACT CCAGAGGAGGTTGACGTGCTTTTCAATAGGGTAGATAAAGATGGCAGTGGGACAATAATTTTCGACGAATTTTTACGTGCTTTAAGGCCACCAATGTCGAATTCACGGACAGAAGTTGTTAGGAAGGCATTCAATAAAATGGACAAAACTGGAGACGGGAAAATCACGTTGGATGATCTACGCAACGTGTATCAAGTTAAATATGATGCCAAGTACATATCTGGGAGAGCGACTGAAGATCAAGTTCTAAGAGAGTTTCTAAAAACGTTTGAAAACGAAAAGTCTGTGGATGGTGTCGTCACCTGGGAAGAATTTCTGAATTACTACAGCGGTGTTAGTGCGTCGATAGATTCGGATTCCTATTTCGAACTTATGATGTGGAAGGCATATGGNTTATAAAC ] [-] EMBL CD165865 [ AGATGTCTATGCTTACTGCGTGGAGCGAATGGTATCTATGGATTCGGAAAACAATTTCGTGTCATGGATGACGATGGAAGCAAGTCTTTATCTAAAGAAGAATTCAAGAAGGGCTGCCATGATTTTGGCTGCAACTTGACT CCAGAGGAGGTTGACGTGCTTTTCAATAGGGTTGATAAAGATGGCAGTGGGACAATAATTTTCGACGAATTTTTACGTGCTTTAAGGCCACCAATGTCGAATTCACGGACAGAAGTTGTTAGGAAGGCATTCAATAAAATGGACAAAACTGGAGACGGGAAAATCACGTTGGATGATCTACGCAACGTGTATCAAGTTAAATATGATGCCAAGTACATATCTGGGAGAGCGACTGAAGATCAAGTTCTAAGAAAGTTTCTAAAAACGTTTGAAAACGAAAAGTCTGTGGATGGTGTCGTCACCTGGGAAGAATTTCTGA ] [-] EMBL CD090401 [ GATTTGNGCTGCAAC TGACTNCCAGAGGAGGTTGACGTGCTTTTCAATAGGGTAGATAAAGATGGCAGTGGGACAATAATTTTCGACGAATTTTTACGTGCTTTAAGGCCACCAATGTCGAATTCACGGACAGAAGTTGTTAGGAAGGCATTCAATAAAATGGACAAAACTGGAGACGGGAAAATCACGTTGGATGATCTACGCAACGTGTATCAAGTTAAATATGATGCCAAGTACATATCTGGGAGAGCGACTGAAGATCAAGTTCTAAGAGAGTTTCTACAAACGTTCGAAAACGAAAAGTCTGTGGACGGTGT ] [+] EMBL CD144335 [ TAGGAAGGCATTCAATAAAATGGACAAAACTGGAGACGGGAAAATCACGTTGGATGATCTACGCAACGTGTATCAAGTTAAATATGATGCCAAGTACATATCTGGGAGAGCGACTGAAGATCAAGTTCTAAGAGAGTTTCTAAAAACGTTTG ] [+] EMBL CD064247 [ AAATGGACAAAACTGGAGA GGCAAAATCACGTTGGATGATCTACGCAACGTGTATCAAGTTAAATATGATGCCAAGTACATATCTGGGAGAGCGACTGAAGATCAAGTTCTAAGAGAGTTTCTAAAAACGTTTGAAAACGAAAAGTC ] [-] EMBL CD064042 [ CAAAACTGGAGACGGGAAAATCACGTTGGATGATCTACGCAACGTGTATCAAGTTAAATATGATGCC AGTACATATCTGGGAGAGCGACT AAGATCAAGTTCTAgg ] [-] EMBL CD074191 [ GATCAAGTTCTAAGAGAGTTTCTAAAAACGTTTGAAAACGAAAAGTCTGTGGATGGTGTCGTCACCTGGGAAGAATTTCTGAATTACTACAGCGGTGTTAGTGCGTCGATAGATTCGGATTCCTATTTCGAACTTATGATGTGGAAGGCATATGGTTTATAAACCCTTACTTTATTTACTCAGAATGCCATGAAATATTATAAATGCGACCTTTTCTGTTGGGAATACTTATTCACTCCAGATATTTTTATTTTTATCTAACAGGATTACTGCACCGAACGTAATATTTTCGAATTACTTCGTTCCTCGATGTTACTAATATCATTGCACTATTTATTGTTGTAGAAAGATTTCACTGAAT CGTCATGTTCATTTATTTTCAGAAACGCGCTTTGGTTGGTAGTCTTCTAGTCTCTTTCAGGAGTATATAAAAGATTTAGTTGTGTTTCTACTTAATTCTATTTTAAAGGACCATTCATTCTCTTGGTATTTGTCTCCAACTATATGTTAGATATTAGAACTGTTTTGTTTCCTTTACATTACTGTTGTATTCAGGTACTTAATCTCCTGACTCTAGCTATATTGTGCTTGTTCTATCATAAATTTAATAATATTT ] [-] EMBL AA999337 [ acCTGAATCCGTCATGTTCA TTATTTTCAGAAACGCGCTTTGGTTGGTAGTCTTCTAGTCTCTTTCAGGAGTATATAAAAGATTTAGTTGTGTTTCTACTTAATTCTATTTTAAAGGACCATTCATTCTCTTGGTATTTGTCTCCAACTATATGTTAGATATTAGAACTGTTTTGTTTCCTTTACATTACTGTTGTATTCAGGTACTTAATCTCCTGACTCTAGCTATATTGTGCTTGTTCTATCATACTTTTAATAATATTTTGGATGTT] [+] EMBL CD135901 [ TACTTAATTCTATTTTAAAGGACCATTCATTCTCTTGGTATTTGTCTCCAACTATATGTTAGATATTAGAACTGTTTTGTTTCCTTTACATTACTGCTGTATTCA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||