cluster # 9240

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Schistosoma mansoni
cluster # 9240 cluster # 9240 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9240#0 length = 1212 sequences # 5

consensus_9240#1 length = 681 sequences # 3
consensus_9240#2 length = 573 sequences # 1

consensusID : consensus_9240#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1212
fasta sequence

                              [TTTCTACCTATTTTGTTGCCACTCACAAAAGAACTTTTATTTTCTCCTCAGTGGGAGCTTAAAGAGTCTGGTATTTTGGTCCTTGGTGCTATTGCAGAAGGTTAGTTCATTATAGTAAATGACTTCGTTAAGGTTGTATGAAGGGAATGATTCCATACCTTCCAGAGTTATGTCCGTTCCTCATTGGTTGTCTGTCGGATGATAGGCCTCTCATACGTAGTATAACTTGTTGGACATTAAGCCGGTATTCTCATTGGATCGTCGGACAACCTCATGAGCAATACTTCAAACCTTTGATGGTTGAGCTCCTCAAAAGAATTTTGGATTGCAACAAACGTGTTCAGGAGGCAGCCTGTTCTGCTTTCGCTACCCTAGAAGAAGAAGCTTGTACAGATCTCGTCCCATATCTGGACCTCATCTTACGAACTCTCGTGTATGCACTTAAGCAATATCAACACAAAAACTTGTTTATTTTGTATGATGCTATAGGTACACTTGCAGATTCTGTTGGTCATCATCTCAACCGACCGGATTTCATAGAGATGCTTATGCCGCCGCTTTTTGAGAAGTGGAACGTTTTACGAGATGACGAAAAAGACTTATTCCCCCTTCTGGAATGCCTTTCTAGCATGGCTACTGCTTTAGGAACAGGTTTCCTACCTTACTGCGCTCCTGTGTTTAGTCGGTGTGTTAATNTAATTGATAGAACAATACAACTCAGCAAGCTACATGCTCAACAACCAGAAGTATATGAACCACCAGACAAAGACTTTATGGTGATTTCTCTGGATCTCCTAAGTGGTCTTATGGAAGGTCTTGGATCTCAGATGGAACATTTAGTATCAAGTAGCCCTTTGGTAAAGTTACTGTGTGAAGCAGCTCAAGACGTCCAACCAGACGTCCGCCAGAGTAGTTTTGCTCTCTTGGGTGACTTAACAAAGGCATGCTTTGCCTACATCCAGCCTCAGATTGGTCAGTTTATGACGATTTTGGCTAATAATCTCAGTTCTGAGCATATATCTGTTAGTAACAATGCTATTTGGGCAATCGGAGAAATTTGTATTCAATTGGGTGAAGGGATGACACCGTTCGCTTCTTTGTTCATTCATCCCTTGATAGAAATTATCAATCGTCAAAGTACACCTAAGACACTCCACGAAAATACTGCGATAACTATTGGACGTCTTGGTTTTGTTTGTCCTGGTGAATTGG]

[-] EMBL CD114779             [TTTCTACCTATTTTGTTGCCACTCACAAAAGAACTTTTATTTTCTCCTCAGTGGGAGCTTAAAGAGTCTGGTATTTTGGTCCTTGGTGCTATTGCAGAAGGTTAGTTCATTATAGTAAATGACTTCGTTAAGGTTGTATGAAGGGAATGATTCCATACCTTCCAGAGTTATGTCCGTTCCTCATTGGTTGTCTGTCGGATGATAGGCCTCTCATACGTAGTATAACTTGTTGGACATTAAGCCGGTATTCTCATTGGATCGTCGGACAACCTCATGAGCAATACTTCAAACCTTTGATGGTTGAGCTCCTCAAAAGAATTTTGGATTGCAACAAACGTGTTCAGGAGGCAGCCTGTTCTGCTTTCGCTACCCTAGAAGAAGAAGCTTGTACAGATCTCGTCCCATATCTGGACCTCATCTTACGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD113641             [                                                                                                                                                                                                                                                                                                                                                                                             AAGCTTGTACAGATCTCGTCCCATATCTGGACCTCATCTTACGAACTCTCGTGTATGCACTTAAGCAATATCAACACAAAAACTTGTTTATTTTGTATGATGCTATAGGTACACTTGCAGATTCTGTTGGTCATCATCTCAACCGACCGGATTTCATAGAGATGCTTATGCCGCCGCTTTTTGAGAAGTGGAACGTTTTACGAGATGACGAAAAAGACTTATTCCCCCTTCTGGAATGCCTTTCTAGCATGGCTACTGCTTTAGGAACAGGTTTCCTACCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD192284             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAAACTTGTTTATTTTGTATGATGCTATAGGTACACTTGCAGATTCTGTTGGTCATCATCTCAACCGACCGGATTTCATAGAGATGCTTATGCCGCCGCTTTTTGAGAAGTGGAACGTTTTACGAGATGACGAAAAAGACTTATTCCCCCTTCTGGAATGCCTTTCTAGCATGGCTACTGCTTTAGGAACAGGTTTCCTACCTTACTGCGCTCCTGTGTTTAGTCGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD120942             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TACTGCTNTAGGAACAGGTTTCCTACCTTACTGCGCTCCTGTGTTTAGTCGGTGTGTTAATNTAATTGATAGAACAATACAACTCAGCAAGCTACATGCTCAACAACCAGAAGTATATGAACCACCAGACAAAGACTTTATGGTGATTTCTCTGGATCTCCTAAGTGGTCTTATGGAAGGTCTTGGATCTCAGATGGAACATTTAGTATCAAGTAGCCCTTTGGTAAAGTTACTGTGTGAAGCAGCTCAAGACGTCCAACCAGACGTCCGCCAGAGTAGTTTTGCTCTCTTGGGTGACTTAACAAAGGCATGCTTTGCCTACATCCAGCCTCAGATTGGTCAGTTTATGACGATTTTGGCTAATAATCTCAGTTCTGAGCATATATCTGTTAGTAACAATGCTATTTGGGCAATCGGAGAAATTTGTATTCAATTGGGTGAAGGGATGACACCGTTCGCTTCTTTGTTCATTCATCCCTTGATAGAAATTATCAATCGTCAAAGTACACCTAAGACACTCCACGAAAATACTGCGATAACTATTGGACGTCTTGGTTTTGTTTGTCCTGGTGAATTGG]
[+] EMBL SMW819               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGGTGATTTCTCTGGATCTCCTAAGTGGTCTTATGGAAGGTCTTGGATCTCAGATGGAACATTTAGTATCAAGTAGCCCTTTGGTAAAGTTACTGTGTGAAGCAGCTCAAGACGTCCAACCAGACGTCCGCCAGAGTAGTTTTGCTCTCTTGGGTGACTTAACAAAGGCATGCTTTGCCTACATCCAGCCTCAGATTGGTCAGTTTATGACAATTTTGGCTAATAATCTCAGTTCTGAGCATATATCTGTTAGTAACAATGCTATTTGGGCAATCGGAGAAATTTGTATTCAATTGGGTGAAGGGATGACACCGTTCGCTTCTTTGTTCATTCATCCCTTGATAGAAATTATCAATCGNCAAAGTAC                                                                       ]




>consensus_9240#0
TTTCTACCTATTTTGTTGCCACTCACAAAAGAACTTTTATTTTCTCCTCAGTGGGAGCTT
AAAGAGTCTGGTATTTTGGTCCTTGGTGCTATTGCAGAAGGTTAGTTCATTATAGTAAAT
GACTTCGTTAAGGTTGTATGAAGGGAATGATTCCATACCTTCCAGAGTTATGTCCGTTCC
TCATTGGTTGTCTGTCGGATGATAGGCCTCTCATACGTAGTATAACTTGTTGGACATTAA
GCCGGTATTCTCATTGGATCGTCGGACAACCTCATGAGCAATACTTCAAACCTTTGATGG
TTGAGCTCCTCAAAAGAATTTTGGATTGCAACAAACGTGTTCAGGAGGCAGCCTGTTCTG
CTTTCGCTACCCTAGAAGAAGAAGCTTGTACAGATCTCGTCCCATATCTGGACCTCATCT
TACGAACTCTCGTGTATGCACTTAAGCAATATCAACACAAAAACTTGTTTATTTTGTATG
ATGCTATAGGTACACTTGCAGATTCTGTTGGTCATCATCTCAACCGACCGGATTTCATAG
AGATGCTTATGCCGCCGCTTTTTGAGAAGTGGAACGTTTTACGAGATGACGAAAAAGACT
TATTCCCCCTTCTGGAATGCCTTTCTAGCATGGCTACTGCTTTAGGAACAGGTTTCCTAC
CTTACTGCGCTCCTGTGTTTAGTCGGTGTGTTAATNTAATTGATAGAACAATACAACTCA
GCAAGCTACATGCTCAACAACCAGAAGTATATGAACCACCAGACAAAGACTTTATGGTGA
TTTCTCTGGATCTCCTAAGTGGTCTTATGGAAGGTCTTGGATCTCAGATGGAACATTTAG
TATCAAGTAGCCCTTTGGTAAAGTTACTGTGTGAAGCAGCTCAAGACGTCCAACCAGACG
TCCGCCAGAGTAGTTTTGCTCTCTTGGGTGACTTAACAAAGGCATGCTTTGCCTACATCC
AGCCTCAGATTGGTCAGTTTATGACGATTTTGGCTAATAATCTCAGTTCTGAGCATATAT
CTGTTAGTAACAATGCTATTTGGGCAATCGGAGAAATTTGTATTCAATTGGGTGAAGGGA
TGACACCGTTCGCTTCTTTGTTCATTCATCCCTTGATAGAAATTATCAATCGTCAAAGTA
CACCTAAGACACTCCACGAAAATACTGCGATAACTATTGGACGTCTTGGTTTTGTTTGTC
CTGGTGAATTGG

consensusID : consensus_9240#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 681
fasta sequence

                              [CATGTGAATTCTGGCTTTCGCTTTCTGAGCAACCCGTGTGCCACCAAGCTCTGTCGCCGTATATTGGGCGACTTATCCCAGTCTTAGTTTGTGGAATGAAGTATTCTGAAAGTGACATGGTGTTACTTCGAAATGATTTAGAAGAAGATGCTCATCTGCCTGACAAGGAATGCGATATTCGCCCGCGGTTTCATAAGACAAAAAACAAACTTTTCTCTCCAGAGGACGATGACGAAGATGAAGACGACGATTATGTTTCCAACTGGACTCTCAGAAAATGTTCTGCTGCTGCCCTTGATGTGTTGGCTAGTGTGTTCCACACAGATTTTCTACCTATTTTGTTGCCACTCACAAAAGAACTTTTATTTTCTCCTCAGTGGGAGCTTAAAGAGTCTGGTATTTTGGTCCTTGGTGCTATTGCAGAAGGTTGTATGAAGGGAATGATTCCATACCTTCCAGAGTTATGTCCGTTCCTCATTGGTTGTCTGTCGGATGATAGGCCTCTCATACGTAGTATAACTTGGTGGACATTAAGCCGGTATTCTCATTGGATCGTCGGACAACCTCATNGAGC-ATACTTCANACCTTTGATGGTTGAGCTCCTCAAAAGAATTTTGGATTGCAACAAACGTGTTCAGGAGGCAGCCTGTTCTGCTTTCGCTACCCTAGAAGAAGAAGCTT]

[+] EMBL CD156738             [CATGTGAATTCTGGCTTTCGCTTTCTGAGCAACCCGTGTGCCACCAAGCTCTGTCGCCGTATATTGGGCGACTTATCCCAGTCTTAGTTTGTGGAATGAAGTATTCTGAAAGTGACATGGTGTTACTTCGAAATGATTTAGAAGAAGATGCTCATCTGCCTGACAAGGAATGCGATATTCGCCCGCGGTTTCATAAGACAAAAAACAAACTTTTCTCTCCAGAGGACGATGACGAAGATGAAGACGACGATTATGTTTCCAACTGGACTCTCAGAAAATGTTCTGCTGCTGCCCTTGATGTGTTGGCTAGTGTGTTCCACACAGATTTTCTACCTATTTTGTTGCCACTCACAAAAGAACTTTTATTTTCTCCTCAGTGGGAGCTTAAAGAGTCTGGTATTTTGGTCCTTGGTGCTATTGCAGAAGGTTGTATGAAGGGAATGATTCCATACCTTCCACAGTTATGTCCGTTCCTCATTGGTTGTCTGTCGGATGATAGGCCTCTCATACGTAGTATAACTTGGTGGACATTAAGCCGGTATTCTCATTGGATCGTCGGACAACCTCATNGAGC ATACTTCANACCTTTGATGGTTG                                                                                    ]
[+] EMBL CD142627             [                                                                                                                                                                                                                                                                                          CTGCTGCTGCCCTTGATGTGTTGGCTAGTGTGTTCCACACAGATTTTCTACCTATTTTGTTGCCACTCACAAAAGAACTTTTATTTTCTCCTCAGTGGGAGCTTAAAGAGTCTGGTATTTTGGTCCTTGGTGCTATTGCAGAAGGTTGTATGAAGGGAATGATTCCATACCTTCCAGAGTTATGTCCGTTCCTCATTGGTTGTCTGTCGGATGATAGGCCTCTCATACGTAGTATAACTTTGTGGACATT                                                                                                                                                      ]
[-] EMBL CD180388             [                                                                                                                                                                                                                                                                                                                    AGTGTGTTCCACACAGATTTTCTACCTATTTTGTTGCCACTCACAAAAGAACTTTTATTTTCTCCTCAGTGGGAGCTTAAAGAGTCTGGTATTTTGGTCCTTGGTGCTATTGCAGAAGGTTGTATGAAGGGAATGATTCCATACCTTCCAGAGTTATGTCCGTTCCTCATTGGTTGTCTGTCGGATGATAGGCCTCTCATACGTAGTATAACTTGTTGGACATTAAGCCGGTATTCTCATTGGATCGTCGGACAACCTCAT GAGCAATACTTCAAACCTTTGATGGTTGAGCTCCTCAAAAGAATTTTGGATTGCAACAAACGTGTTCAGGAGGCAGCCTGTTCTGCTTTCGCTACCCTAGAAGAAGAAGCTT]




>consensus_9240#1
CATGTGAATTCTGGCTTTCGCTTTCTGAGCAACCCGTGTGCCACCAAGCTCTGTCGCCGT
ATATTGGGCGACTTATCCCAGTCTTAGTTTGTGGAATGAAGTATTCTGAAAGTGACATGG
TGTTACTTCGAAATGATTTAGAAGAAGATGCTCATCTGCCTGACAAGGAATGCGATATTC
GCCCGCGGTTTCATAAGACAAAAAACAAACTTTTCTCTCCAGAGGACGATGACGAAGATG
AAGACGACGATTATGTTTCCAACTGGACTCTCAGAAAATGTTCTGCTGCTGCCCTTGATG
TGTTGGCTAGTGTGTTCCACACAGATTTTCTACCTATTTTGTTGCCACTCACAAAAGAAC
TTTTATTTTCTCCTCAGTGGGAGCTTAAAGAGTCTGGTATTTTGGTCCTTGGTGCTATTG
CAGAAGGTTGTATGAAGGGAATGATTCCATACCTTCCAGAGTTATGTCCGTTCCTCATTG
GTTGTCTGTCGGATGATAGGCCTCTCATACGTAGTATAACTTGGTGGACATTAAGCCGGT
ATTCTCATTGGATCGTCGGACAACCTCATNGAGCATACTTCANACCTTTGATGGTTGAGC
TCCTCAAAAGAATTTTGGATTGCAACAAACGTGTTCAGGAGGCAGCCTGTTCTGCTTTCG
CTACCCTAGAAGAAGAAGCTT

consensusID : consensus_9240#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 573
fasta sequence

                              [TGTGTTGGCTAGTGTGTTCCACACAGATTTTCTACCTATTTTGTTGCCACTCACAAAAGAACTTTTATTTTCTCCTCAGTGGGAGCTTAAAGAGTCTGGTATTTTGGTCCTTGGTGCTATTGCAGAAGGTTAGTTCATTATAGTAAATGACTTCGTTAAGGTTGTATGAAGGGAATGATTCCATACCTTCCAGAGTTATGTCCGTTCCTCATTGGTTGTCTGTCGGATGATAGGCCTCTCATACGTAGTATAACTTGTAGGACATTAAGCCGGTATTCTCATTGGATCGTCGGACAACCTCATGAGCAATACTTCAAACCTTTGATGGTTGAGGTAAGTCAACCTTTAGACTTAATTGTTGTAGCTCCTCAAAAGAATTTTGGATTGCAACAAACGTGTTCAGGAGGCAGCCTGTTCTGCTTTCGCTACCCTAGAAGAAGAAGCTTGTACAGATCTCGTCCCATATCTGGACCTCATCTTACGAACTCTCGTGTATGCACTTAAGCAATATCAACACAAAAACTTGTTTATTTTGTATGATGCTATAGGTACACTTGCAGATTCTGTTGGTCA]

[+] EMBL CD066061             [TGTGTTGGCTAGTGTGTTCCACACAGATTTTCTACCTATTTTGTTGCCACTCACAAAAGAACTTTTATTTTCTCCTCAGTGGGAGCTTAAAGAGTCTGGTATTTTGGTCCTTGGTGCTATTGCAGAAGGTTAGTTCATTATAGTAAATGACTTCGTTAAGGTTGTATGAAGGGAATGATTCCATACCTTCCAGAGTTATGTCCGTTCCTCATTGGTTGTCTGTCGGATGATAGGCCTCTCATACGTAGTATAACTTGTAGGACATTAAGCCGGTATTCTCATTGGATCGTCGGACAACCTCATGAGCAATACTTCAAACCTTTGATGGTTGAGGTAAGTCAACCTTTAGACTTAATTGTTGTAGCTCCTCAAAAGAATTTTGGATTGCAACAAACGTGTTCAGGAGGCAGCCTGTTCTGCTTTCGCTACCCTAGAAGAAGAAGCTTGTACAGATCTCGTCCCATATCTGGACCTCATCTTACGAACTCTCGTGTATGCACTTAAGCAATATCAACACAAAAACTTGTTTATTTTGTATGATGCTATAGGTACACTTGCAGATTCTGTTGGTCA]




>consensus_9240#2
TGTGTTGGCTAGTGTGTTCCACACAGATTTTCTACCTATTTTGTTGCCACTCACAAAAGA
ACTTTTATTTTCTCCTCAGTGGGAGCTTAAAGAGTCTGGTATTTTGGTCCTTGGTGCTAT
TGCAGAAGGTTAGTTCATTATAGTAAATGACTTCGTTAAGGTTGTATGAAGGGAATGATT
CCATACCTTCCAGAGTTATGTCCGTTCCTCATTGGTTGTCTGTCGGATGATAGGCCTCTC
ATACGTAGTATAACTTGTAGGACATTAAGCCGGTATTCTCATTGGATCGTCGGACAACCT
CATGAGCAATACTTCAAACCTTTGATGGTTGAGGTAAGTCAACCTTTAGACTTAATTGTT
GTAGCTCCTCAAAAGAATTTTGGATTGCAACAAACGTGTTCAGGAGGCAGCCTGTTCTGC
TTTCGCTACCCTAGAAGAAGAAGCTTGTACAGATCTCGTCCCATATCTGGACCTCATCTT
ACGAACTCTCGTGTATGCACTTAAGCAATATCAACACAAAAACTTGTTTATTTTGTATGA
TGCTATAGGTACACTTGCAGATTCTGTTGGTCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9240#0      ------------------------------------------------------------
consensus_9240#2      ------------------------------------------------------------
consensus_9240#1      CATGTGAATTCTGGCTTTCGCTTTCTGAGCAACCCGTGTGCCACCAAGCTCTGTCGCCGT 60
                                                                                  

consensus_9240#0      ------------------------------------------------------------
consensus_9240#2      ------------------------------------------------------------
consensus_9240#1      ATATTGGGCGACTTATCCCAGTCTTAGTTTGTGGAATGAAGTATTCTGAAAGTGACATGG 120
                                                                                  

consensus_9240#0      ------------------------------------------------------------
consensus_9240#2      ------------------------------------------------------------
consensus_9240#1      TGTTACTTCGAAATGATTTAGAAGAAGATGCTCATCTGCCTGACAAGGAATGCGATATTC 180
                                                                                  

consensus_9240#0      ------------------------------------------------------------
consensus_9240#2      ------------------------------------------------------------
consensus_9240#1      GCCCGCGGTTTCATAAGACAAAAAACAAACTTTTCTCTCCAGAGGACGATGACGAAGATG 240
                                                                                  

consensus_9240#0      ------------------------------------------------------------
consensus_9240#2      ----------------------------------------------------------TG 2
consensus_9240#1      AAGACGACGATTATGTTTCCAACTGGACTCTCAGAAAATGTTCTGCTGCTGCCCTTGATG 300
                                                                                  

consensus_9240#0      --------------------------TTTCTACCTATTTTGTTGCCACTCACAAAAGAAC 34
consensus_9240#2      TGTTGGCTAGTGTGTTCCACACAGATTTTCTACCTATTTTGTTGCCACTCACAAAAGAAC 62
consensus_9240#1      TGTTGGCTAGTGTGTTCCACACAGATTTTCTACCTATTTTGTTGCCACTCACAAAAGAAC 360
                                                **********************************

consensus_9240#0      TTTTATTTTCTCCTCAGTGGGAGCTTAAAGAGTCTGGTATTTTGGTCCTTGGTGCTATTG 94
consensus_9240#2      TTTTATTTTCTCCTCAGTGGGAGCTTAAAGAGTCTGGTATTTTGGTCCTTGGTGCTATTG 122
consensus_9240#1      TTTTATTTTCTCCTCAGTGGGAGCTTAAAGAGTCTGGTATTTTGGTCCTTGGTGCTATTG 420
                      ************************************************************

consensus_9240#0      CAGAAGGTTAGTTCATTATAGTAAATGACTTCGTTAAGGTTGTATGAAGGGAATGATTCC 154
consensus_9240#2      CAGAAGGTTAGTTCATTATAGTAAATGACTTCGTTAAGGTTGTATGAAGGGAATGATTCC 182
consensus_9240#1      CAGA--------------------------------AGGTTGTATGAAGGGAATGATTCC 448
                      ****                                ************************

consensus_9240#0      ATACCTTCCAGAGTTATGTCCGTTCCTCATTGGTTGTCTGTCGGATGATAGGCCTCTCAT 214
consensus_9240#2      ATACCTTCCAGAGTTATGTCCGTTCCTCATTGGTTGTCTGTCGGATGATAGGCCTCTCAT 242
consensus_9240#1      ATACCTTCCAGAGTTATGTCCGTTCCTCATTGGTTGTCTGTCGGATGATAGGCCTCTCAT 508
                      ************************************************************

consensus_9240#0      ACGTAGTATAACTTGTTGGACATTAAGCCGGTATTCTCATTGGATCGTCGGACAACCTCA 274
consensus_9240#2      ACGTAGTATAACTTGTAGGACATTAAGCCGGTATTCTCATTGGATCGTCGGACAACCTCA 302
consensus_9240#1      ACGTAGTATAACTTGGTGGACATTAAGCCGGTATTCTCATTGGATCGTCGGACAACCTCA 568
                      ***************  *******************************************

consensus_9240#0      TGAGCAATACTTCAAACCTTTGATGGTTGAG----------------------------- 305
consensus_9240#2      TGAGCAATACTTCAAACCTTTGATGGTTGAGGTAAGTCAACCTTTAGACTTAATTGTTGT 362
consensus_9240#1      TNGAGCATACTTCANACCTTTGATGGTTGAG----------------------------- 599
                      *     ******** ****************                             

consensus_9240#0      --CTCCTCAAAAGAATTTTGGATTGCAACAAACGTGTTCAGGAGGCAGCCTGTTCTGCTT 363
consensus_9240#2      AGCTCCTCAAAAGAATTTTGGATTGCAACAAACGTGTTCAGGAGGCAGCCTGTTCTGCTT 422
consensus_9240#1      --CTCCTCAAAAGAATTTTGGATTGCAACAAACGTGTTCAGGAGGCAGCCTGTTCTGCTT 657
                        **********************************************************

consensus_9240#0      TCGCTACCCTAGAAGAAGAAGCTTGTACAGATCTCGTCCCATATCTGGACCTCATCTTAC 423
consensus_9240#2      TCGCTACCCTAGAAGAAGAAGCTTGTACAGATCTCGTCCCATATCTGGACCTCATCTTAC 482
consensus_9240#1      TCGCTACCCTAGAAGAAGAAGCTT------------------------------------ 681
                      ************************                                    

consensus_9240#0      GAACTCTCGTGTATGCACTTAAGCAATATCAACACAAAAACTTGTTTATTTTGTATGATG 483
consensus_9240#2      GAACTCTCGTGTATGCACTTAAGCAATATCAACACAAAAACTTGTTTATTTTGTATGATG 542
consensus_9240#1      ------------------------------------------------------------
                                                                                  

consensus_9240#0      CTATAGGTACACTTGCAGATTCTGTTGGTCATCATCTCAACCGACCGGATTTCATAGAGA 543
consensus_9240#2      CTATAGGTACACTTGCAGATTCTGTTGGTCA----------------------------- 573
consensus_9240#1      ------------------------------------------------------------
                                                                                  

consensus_9240#0      TGCTTATGCCGCCGCTTTTTGAGAAGTGGAACGTTTTACGAGATGACGAAAAAGACTTAT 603
consensus_9240#2      ------------------------------------------------------------
consensus_9240#1      ------------------------------------------------------------
                                                                                  

consensus_9240#0      TCCCCCTTCTGGAATGCCTTTCTAGCATGGCTACTGCTTTAGGAACAGGTTTCCTACCTT 663
consensus_9240#2      ------------------------------------------------------------
consensus_9240#1      ------------------------------------------------------------
                                                                                  

consensus_9240#0      ACTGCGCTCCTGTGTTTAGTCGGTGTGTTAATNTAATTGATAGAACAATACAACTCAGCA 723
consensus_9240#2      ------------------------------------------------------------
consensus_9240#1      ------------------------------------------------------------
                                                                                  

consensus_9240#0      AGCTACATGCTCAACAACCAGAAGTATATGAACCACCAGACAAAGACTTTATGGTGATTT 783
consensus_9240#2      ------------------------------------------------------------
consensus_9240#1      ------------------------------------------------------------
                                                                                  

consensus_9240#0      CTCTGGATCTCCTAAGTGGTCTTATGGAAGGTCTTGGATCTCAGATGGAACATTTAGTAT 843
consensus_9240#2      ------------------------------------------------------------
consensus_9240#1      ------------------------------------------------------------
                                                                                  

consensus_9240#0      CAAGTAGCCCTTTGGTAAAGTTACTGTGTGAAGCAGCTCAAGACGTCCAACCAGACGTCC 903
consensus_9240#2      ------------------------------------------------------------
consensus_9240#1      ------------------------------------------------------------
                                                                                  

consensus_9240#0      GCCAGAGTAGTTTTGCTCTCTTGGGTGACTTAACAAAGGCATGCTTTGCCTACATCCAGC 963
consensus_9240#2      ------------------------------------------------------------
consensus_9240#1      ------------------------------------------------------------
                                                                                  

consensus_9240#0      CTCAGATTGGTCAGTTTATGACGATTTTGGCTAATAATCTCAGTTCTGAGCATATATCTG 1023
consensus_9240#2      ------------------------------------------------------------
consensus_9240#1      ------------------------------------------------------------
                                                                                  

consensus_9240#0      TTAGTAACAATGCTATTTGGGCAATCGGAGAAATTTGTATTCAATTGGGTGAAGGGATGA 1083
consensus_9240#2      ------------------------------------------------------------
consensus_9240#1      ------------------------------------------------------------
                                                                                  

consensus_9240#0      CACCGTTCGCTTCTTTGTTCATTCATCCCTTGATAGAAATTATCAATCGTCAAAGTACAC 1143
consensus_9240#2      ------------------------------------------------------------
consensus_9240#1      ------------------------------------------------------------
                                                                                  

consensus_9240#0      CTAAGACACTCCACGAAAATACTGCGATAACTATTGGACGTCTTGGTTTTGTTTGTCCTG 1203
consensus_9240#2      ------------------------------------------------------------
consensus_9240#1      ------------------------------------------------------------
                                                                                  

consensus_9240#0      GTGAATTGG 1212
consensus_9240#2      ---------
consensus_9240#1      ---------