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Schistosoma mansoni
cluster # 9269 cluster # 9269       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9269#0 length = 1172 sequences # 4  
consensus_9269#1 length = 728 sequences # 1  
consensus_9269#2 length = 635 sequences # 4  

consensusID : consensus_9269#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1172
fasta sequence
                              [CCAGAATTCGGCAATGGGGCTTTTCTGTTATGAACCCCATTATCGCAGCAACATAGTGTAGCTAGTATCGGAAGCTTGTTGGGCAATTTGCCTTTACAAGGTGATTCAAGTTTACAACAAAAAACGCCACTTATCCCTGGGGGTTCAGTCAATCTTAACTTACATGCGTCTGACAATGCCGCCAGCATTCCGAGTAGAACACCT-TGTACTCCGCT-CACTTTATCTACACCGTTGCAAGACCGAGATGGTGCAATCCCAGTACCTCAATTACAGAATATTGTATGTACAGTATATTTAGGATGTAAATTAAATCTGAAGAATATAGCACTTAGTGCTCGAAATGCTGAATACAATCCAAAACGTTTTGCTGCAGTTATAATGCGCATACGTGAACCTCGGACAACTGCTTTAATTTTTTCTTCTGGTAAAATGGTGTGTACAGGTGCAAAAAGTGAAGAGCAAGCAAGACTAGCTGCAAGAAAATATGCTCGTATTATTCAAAGGCTTGGGTTTGAAGCTCATTTCAAAGAGTTCAAAATTCAAAATANTGGTTGGNTTCGTGTGATGTCCGCTTTCATATACGTCTTGAAGGTTTAGTATTGTCACAAGGTCAATTTGCAACCTATGAGCCAGAATTATTCCCTGGGTTAATTTATCGTATGACTAAACCAAAGATAGTCCTACTAGTCTTTGTTTCTGGGAAGATTGTTCT-ACAGGAGCAAAGGGTCGTGAAGAAA-TTATGAAGC-TTTAAT-ACATCTATCC-ATTNTGAANAATTT--AAAAATCTGAT-AAGATCCTAGA-CCCTCAC-TCGT-ATCAAA-TAT-TGCAT-CATTNAC-TG-ACT-AATATAAATACCCAATTGTTTTTTTCTCCACGTTATTTTTTACTGCTTTTCTTACTAAGGATTAAAACAAACCGACATCATAAGATACTTTTTCTCAGTTTTTACCAATTGAATTAGTCATGCTAACAGCATTAAAAACTATGTAAATCTCTATGAAACAACAAGCTGTATATTCCTCGAAATCCATGAATTATTTGAGCACTCTTTACACATTAAGATTTTCTGCTCGTCCCTCACTATTTTTCCAAGTGTATCTTTATTATCTGTTGACATTTAATTTTTGACGTCAATAGTTTTTAGGAATTGTATTTGCTGTCGTTGTGAATATTATAAAACT]

[+] EMBL CD079955             [CCAGAATTCGGCACGAGGGCTTTTCTGTTATGAACCCC TTATCGCAGCAACATAGTGTAGCTAGTATCGGAAGCTTGTTGGGCAATTTGCCTTTACAAGGTGATTCAAGTTTACAACAAAAAACGCCACTTATCCCTGGGGGTTCAGTCAATCTTAACTTACATGCGTCTGACAATGCCGCCAGCATTCCGAGTAGAACACCT TGTACTCCGCT CACTTTATCTACACCGTTGCAAGACCGAGATGGTGCAATCCCAGTACCTCAATTACAGAATATTGTATGTACAGTATATTTAGGATGTAAATTAAATCTGAAGAATATAGCACTTAGTGCTCGAAATGCTGAATACAATCCAAAACGTTTTGCTGCAGTTATAATGCGCATACGTGAACCTCGGACAACTGCTTTAATTTTTTCTTCTGGTAAAATGGTGTGTACAGGTGCAAAAAGTGAAGAGCAAGCAAGACTAGCTGCAAGAAAATATGCTCGTATTATTCAAAGGCTTGGGTTTGAAGCTCATTTCAAAGAGTTCAAAATTCAAAATANTGGTTGGNTTCGTGTGATGTCCGCTTTCATATACGTCTTGAAGGTTTAGTATTGTCACAAGGTCAATTTGCAACCTATGAGCCAGAATTATTCCCTGGGTTAATTTATCGTATGACTAAACCAAAGATAGTCCTACTAGTCTTTGTTTCTGGGAAGATTGTTCT ACAGGAGCAAAGGGTCGTGAAGAAA TTATGAAGC TTTAAT ACATCTATCC ATTNTGAANAATTT  AAAAATCTGAT AAGATCCTAGA CCCTCAC TCGT ATCAAA TAT TGCAT CATTNAC TG ACT AATATAAATACCCA                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD060172             [          ctgATGGGACTTTTCTGTTATGAACCCCATTATCGCAGCAACATAGTGTAGCTAGTATCGGAAGCTTGTTGGGCAATTTGCCTTTACAAGGTGATTCAAGTTTACAACAAAAAACGCCACTTATCCCTGGGGGTTCAGTCAATCTTAACTTACATGCGTCTGACAATGCCGCCAGCATTCCGAGTAGAACACCT TGTACTCCGCT CACTTTATCTACACCGTTGCAAGACCGAGATGGTGCAATCCCAGTACCTCAATTACAGAATATTGTATGTACAGTATATTTAGGATGTAAATTAAATCTGAAGAATATAGCACTTAGTGCTCGAAATGCTGAATACAATCCAAAACGTTTTGCTGCAGTTATAATGCGCATACGTGAACCTCGGACAACTGCTTTAATTTTTTCTTCTGGTAAAATGGTGTGTACAGGTGCAAAAAGTGAAGAGCAAGCAAGACTAGCTGCAAGAAAATATGCTCGTATTATTCAAAGGCTTGGGTTTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD060181             [             gTGGGCCTTATCTGTTATGAACCCCATTATCGCAGCAACATAGTGTAGCTAGTATCGGAAGCTTGTTGGGCAATTTGCCTTTACAAGGTGATTCAAGTATACAACAAAAAACGCCACTTATCCCTGGGGGTTCAGTCAATCTTAACTTACATGCGTCTGACAATGCCGCCAGCATTCCGAGTAGAACACCTATGTACTCCGCTCCACTTTATCTACACCGTAGCAAGACCGAGATGGTGCAATCCCAGTACCTCAATTACAGAATATTGTATGTACAGTATCTCCAGGATGTACATTCAATCTGAAGAATATAGCACTTAGTGCTCGAAATGCTGAATACAATCCAAAACGTTTCGCTGCAGTTATAATGCGCATACGTGAACCTCGGACAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD074538             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGGGTTTGAAGCTCATTTCAAAGAGTTCAAAATTCAAAATA TGGTTGG TTCGTGTGATGTCCGCTTTCATATACGTCTTGAAGGTTTAGTATTGTCACAAGGTCAATTTGCAACCTATGAGCCAGAATTATTCCCTGGGTTAATTTATCGTATGACTAAACCAAAGATAGTCCTACTAGTCTTTGTTTCTGGGAAGATTGTTCTAACAGGAGCAAAGGTTCGTGAAGAAATTTATGAAGCTTTTAATAACATCTATCCAATTTTGAAAAATTTTAAAAAATCTGATAAAGATCCTAGAGCCCTCACATCGTCATCAAATTATATGCATCCATTAACTTGAACTAAATATAAATAACCAATTGTTTTTTTCTCCACGTTATTTTTTACTGCTTTTCTTACTAAGGATTAAAACAAACCGACATCATAAGATACTTTTTCTCAGTTTTTACCAATTGAATTAGTCATGCTAACAGCATTAAAAACTATGTAAATCTCTATGAAACAACAAGCTGTATATTCCTCGAAATCCATGAATTATTTGAGCACTCTTTACACATTAAGATTTTCTGCTCGTCCCTCACTATTTTTCCAAGTGTATCTTTATTATCTGTTGACATTTAATTTTTGACGTCAATAGTTTTTAGGAATTGTATTTGCTGTCGTTGTGAATATTATAAAACT]


>consensus_9269#0 CCAGAATTCGGCAATGGGGCTTTTCTGTTATGAACCCCATTATCGCAGCAACATAGTGTA GCTAGTATCGGAAGCTTGTTGGGCAATTTGCCTTTACAAGGTGATTCAAGTTTACAACAA AAAACGCCACTTATCCCTGGGGGTTCAGTCAATCTTAACTTACATGCGTCTGACAATGCC GCCAGCATTCCGAGTAGAACACCTTGTACTCCGCTCACTTTATCTACACCGTTGCAAGAC CGAGATGGTGCAATCCCAGTACCTCAATTACAGAATATTGTATGTACAGTATATTTAGGA TGTAAATTAAATCTGAAGAATATAGCACTTAGTGCTCGAAATGCTGAATACAATCCAAAA CGTTTTGCTGCAGTTATAATGCGCATACGTGAACCTCGGACAACTGCTTTAATTTTTTCT TCTGGTAAAATGGTGTGTACAGGTGCAAAAAGTGAAGAGCAAGCAAGACTAGCTGCAAGA AAATATGCTCGTATTATTCAAAGGCTTGGGTTTGAAGCTCATTTCAAAGAGTTCAAAATT CAAAATANTGGTTGGNTTCGTGTGATGTCCGCTTTCATATACGTCTTGAAGGTTTAGTAT TGTCACAAGGTCAATTTGCAACCTATGAGCCAGAATTATTCCCTGGGTTAATTTATCGTA TGACTAAACCAAAGATAGTCCTACTAGTCTTTGTTTCTGGGAAGATTGTTCTACAGGAGC AAAGGGTCGTGAAGAAATTATGAAGCTTTAATACATCTATCCATTNTGAANAATTTAAAA ATCTGATAAGATCCTAGACCCTCACTCGTATCAAATATTGCATCATTNACTGACTAATAT AAATACCCAATTGTTTTTTTCTCCACGTTATTTTTTACTGCTTTTCTTACTAAGGATTAA AACAAACCGACATCATAAGATACTTTTTCTCAGTTTTTACCAATTGAATTAGTCATGCTA ACAGCATTAAAAACTATGTAAATCTCTATGAAACAACAAGCTGTATATTCCTCGAAATCC ATGAATTATTTGAGCACTCTTTACACATTAAGATTTTCTGCTCGTCCCTCACTATTTTTC CAAGTGTATCTTTATTATCTGTTGACATTTAATTTTTGACGTCAATAGTTTTTAGGAATT GTATTTGCTGTCGTTGTGAATATTATAAAACT



consensusID : consensus_9269#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 728
fasta sequence
                              [TCCGAGGCCAAAATTCGGCACGAGGGGCTAATAGTTTGTTAAGATTTGTCGCTCATAACATTTTGAATCCCTTTGGACATAGTACGACGTCGCTGTTCTAGGTAAATCATTCTTCTGGTTGGACTTTTCTGTTATGAACCCCTTATCGCAGCAACATAGTGTAGCTAGTATCGGAAGCTTGTTGGGCAATTTGCCTTTACAAGGTGATTCAAGTTTACAACAAAAAACGCCACTTATCCCTGGGGGTTCAGTCAATCTTAACTTACATGCGTCTGACAATGCCGCCAGCATTCCGAGTAGAACACCTTGTACTCCGCTCACTTTATCTACACCGTTGCAAGACCGAGATGGTGCAATCCCAGTACCTCAATTACAGAATATTGTATGTACAGTATATTTAGGATGTAAATTAAATCTGAAGAATATAGCACTTAGTGCTCGAAATGCTGAATACAATCCAAAACGTTTTGCTGCAGTTATAATGCGCATACGTGAACCTCGGACAACTGCTTTAATTTTTTCTTCTGGTAAAATGGTGTGTACAGGTGCAAAAAGTGAAGAGCAAGCAAGACTAGCTGCAAGAAAATATGCTCGTATTATTCAAAGGCTTGGGTTTGAAGCTCATTTCANAGAGTTCAAAATTCAAAATATGGTTGGTTCGTGTGATGTCCGCTTTCATATACGTCTTGAAGGTTTAGTATTGTCACAAGGTCAATTTGCAACCTATG]

[+] EMBL CD080629             [TCCGAGGCCAAAATTCGGCACGAGGGGCTAATAGTTTGTTAAGATTTGTCGCTCATAACATTTTGAATCCCTTTGGACATAGTACGACGTCGCTGTTCTAGGTAAATCATTCTTCTGGTTGGACTTTTCTGTTATGAACCCCTTATCGCAGCAACATAGTGTAGCTAGTATCGGAAGCTTGTTGGGCAATTTGCCTTTACAAGGTGATTCAAGTTTACAACAAAAAACGCCACTTATCCCTGGGGGTTCAGTCAATCTTAACTTACATGCGTCTGACAATGCCGCCAGCATTCCGAGTAGAACACCTTGTACTCCGCTCACTTTATCTACACCGTTGCAAGACCGAGATGGTGCAATCCCAGTACCTCAATTACAGAATATTGTATGTACAGTATATTTAGGATGTAAATTAAATCTGAAGAATATAGCACTTAGTGCTCGAAATGCTGAATACAATCCAAAACGTTTTGCTGCAGTTATAATGCGCATACGTGAACCTCGGACAACTGCTTTAATTTTTTCTTCTGGTAAAATGGTGTGTACAGGTGCAAAAAGTGAAGAGCAAGCAAGACTAGCTGCAAGAAAATATGCTCGTATTATTCAAAGGCTTGGGTTTGAAGCTCATTTCANAGAGTTCAAAATTCAAAATATGGTTGGTTCGTGTGATGTCCGCTTTCATATACGTCTTGAAGGTTTAGTATTGTCACAAGGTCAATTTGCAACCTATG]


>consensus_9269#1 TCCGAGGCCAAAATTCGGCACGAGGGGCTAATAGTTTGTTAAGATTTGTCGCTCATAACA TTTTGAATCCCTTTGGACATAGTACGACGTCGCTGTTCTAGGTAAATCATTCTTCTGGTT GGACTTTTCTGTTATGAACCCCTTATCGCAGCAACATAGTGTAGCTAGTATCGGAAGCTT GTTGGGCAATTTGCCTTTACAAGGTGATTCAAGTTTACAACAAAAAACGCCACTTATCCC TGGGGGTTCAGTCAATCTTAACTTACATGCGTCTGACAATGCCGCCAGCATTCCGAGTAG AACACCTTGTACTCCGCTCACTTTATCTACACCGTTGCAAGACCGAGATGGTGCAATCCC AGTACCTCAATTACAGAATATTGTATGTACAGTATATTTAGGATGTAAATTAAATCTGAA GAATATAGCACTTAGTGCTCGAAATGCTGAATACAATCCAAAACGTTTTGCTGCAGTTAT AATGCGCATACGTGAACCTCGGACAACTGCTTTAATTTTTTCTTCTGGTAAAATGGTGTG TACAGGTGCAAAAAGTGAAGAGCAAGCAAGACTAGCTGCAAGAAAATATGCTCGTATTAT TCAAAGGCTTGGGTTTGAAGCTCATTTCANAGAGTTCAAAATTCAAAATATGGTTGGTTC GTGTGATGTCCGCTTTCATATACGTCTTGAAGGTTTAGTATTGTCACAAGGTCAATTTGC AACCTATG



consensusID : consensus_9269#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 635
fasta sequence
                              [TTCGGCACGAGGGTCCGCTTTCATATACGTCTTGAAGGTTTAGTATTGTCACAAGGTCAATTTGCAACCTATGAGCCAGAATTATTCCCTGGGTTAATTTATCGTATGACTAAACCAAAGATAGTCCTACTAGTCTTTGTTTCTGGGAAGATTGTTCTAACAGGAGCAAAGGTTCGTGAAGAAATTTATGAAGCTTTTAATAACATCTATCCAATTTTGAAAAATTTTAAAAAATCTGATAAAGATCCTAGAGCCCTCACATCGTCATCAAATTATATGCATCCATTAACTTGAACTAAATATAAATAACCAATTGTTTTTTTCTCCACGTTATTTTTTACTGCTTTTCTTACTAAGGATTAAAACAAACCGACATCATAAGATACTTTTTCTCAGTTTTTACCAATTGAATTAGTCATGCTAACAGCATTAAAAACTATGTAAATCTCTATGAAACAACAAGCTGTATATTCCTCGAAATCCATGAATTATTTGAGCACTCTTTACACATTAAGATTTTCTGCTCGTCCCTCACTATTTTTCCAAGTGTATCTTTATTATCTGTTGACATTTAATTTTTGACGTCAATAGTTTTTAGGAATTGTATTTGCTGTCGTTGTGTATATTATAAAACT]

[+] EMBL CD081836             [TTCGGCACGAGGGTCCGCTTTCATATACGTCTTGAAGGTTTAGTATTGTCACAAGGTCAATTTGCAACCTATGAGCCAGAATTATTCCCTGGGTTAATTTATCGTATGACTAAACCAAAGATAGTCCTACTAGTCTTTGTTTCTGGGAAGATTGTTCTAACAGGAGCAAAGGTTCGTGAAGAAATTTATGAAGCTTTTAATAACATCTATCCAATTTTGAAAAATTTTAAAAAATCTGATAAAGATCCTAGAGCCCTCACATCGTCATCAAATTATATGCATCCATTAACTTGAACTAAATATAAATAACCAATTGTTTTTTTCTCCACGTTATTTTTTACTGCTTTTCTTACTAAGGATTAAAACAAACCGACATCATAAGATACTTTTTCTCAGTTTTTACCAATTGAATTAGTCATGCTAACAGCATTAAAAACTATGTAAATCTCTATGAAACAACAAGCTGTATATTCCTCGAAATCCATGAATTATTTGAGCACTCTTTACACATTAAGATTTTCTGCTCGTCCCTCACTATTTTTCCAAGTGTATCTTTATTATCTGTTGACATTTAATTTTTGACGTCAATAGTTTTTAGGAATTGTATTTGCTGTCGTTGTGTATATTATAAAAC ]
[-] EMBL CD075557             [                             TCTTGAAGGTTTAGTATTGTCACAAGGTCAATTTGCAACCTATGAGCCAGAATTATTCCCTGGGTTAATTTATCGTATGACTAAACCAAAGATAGTCCTACTAGTCTTTGTTTCTGGGAAGATTGTTCTAACAGGAGCAAAGGTTCGTGAAGAAATTTATGAAGCTTTTAATAACATCTATCCAATTTTGAAAAATTTTAAAAAATCTGATAAAGATCCTAGAGCCCTCACATCGTCATCAAATTATATGCATCCATTAACTTGAACTAAATATAAATAACCAATTGTTTTTTTCTCCACGTTATTTTTTACTGCTTTTCTTACTAAGGATTAAAACAAACCGACATCATAAGATACTTTTTCTCAGTTTTTACCAATTGAATTAGTCATGCTAACAGCATTAAAAACTATGTAAATCTCTATGAAACAACAAGCTGTATATTCCTCGAAATCCATGAATTATTTGAGCACTCTTTACACATTAAGATTTTCTGCTCGTCCCTCACTATTTTTCCAAGTGTATCTTTATTATCTGTTGACATTTAATTTTTGACGTCAATAGTTTTTAGGAATTGTATTTGCTGTCGTTGTGTATATTATAAAACT]
[-] EMBL BF936140             [                                                                                                                                                                                                  TTTTAATAACATCTATCCAATTTTGAAAAATTTTAAAAAATCTGATAAAGATCCTAGAGCCCTCACATCGTCATCAAATTATATGCATCCATTAACTTGAACTAAATATAAATAACCAATTGTTTTTTTCTCCACGTTATTTTTTACTGCTTTTCTTACTAAGGATTAAAACAAACCGACATCATAAGATACTTTTTCTCAGTTTTTACCAATTGAATTAGTCATGCTAACAGCATTAAAAACTATGTAAATCTCTATGAAACAACAAGCTGTATATTCCTCGAAATCCATGAATTATTTGAGCACTCTTTACACATTAAGATTTTCTGCTCGTCCCTCACTATTTTTCCAAGTGTATCTTTATTATCTGTTGACATTTAATTTTTGACGTCAATAGTTTTTAGGAATTGTATTTGCTGTCGTTGTGTATATTATAAAACT]
[-] EMBL CD140982             [                                                                                                                                                                                                                                                                                           CATTANCTTGAACTAAATATAAATANCCAA TGTTTTTTTCTNCACGTTATTTTNTACTGCTTNTCTTACTAAGGATTAAAACAAACCGACATCATAAGATACTTTTTCTCAGTTTTTACCAATTGAATTAGTCATGCTAACAGCATTAAAAACTATGTAAATCTCTATGAAACAACAAGCTGTATATTCCTCGAAATCCATGAATTATTTGAGCACTCTTTACACATTAAGATTTTCTGCTCGTCCCTCACTATTTTTCCAAGTGTATCTTTATTATCTGTTGACATTTAATTTTTGACGTCAA                                               ]


>consensus_9269#2 TTCGGCACGAGGGTCCGCTTTCATATACGTCTTGAAGGTTTAGTATTGTCACAAGGTCAA TTTGCAACCTATGAGCCAGAATTATTCCCTGGGTTAATTTATCGTATGACTAAACCAAAG ATAGTCCTACTAGTCTTTGTTTCTGGGAAGATTGTTCTAACAGGAGCAAAGGTTCGTGAA GAAATTTATGAAGCTTTTAATAACATCTATCCAATTTTGAAAAATTTTAAAAAATCTGAT AAAGATCCTAGAGCCCTCACATCGTCATCAAATTATATGCATCCATTAACTTGAACTAAA TATAAATAACCAATTGTTTTTTTCTCCACGTTATTTTTTACTGCTTTTCTTACTAAGGAT TAAAACAAACCGACATCATAAGATACTTTTTCTCAGTTTTTACCAATTGAATTAGTCATG CTAACAGCATTAAAAACTATGTAAATCTCTATGAAACAACAAGCTGTATATTCCTCGAAA TCCATGAATTATTTGAGCACTCTTTACACATTAAGATTTTCTGCTCGTCCCTCACTATTT TTCCAAGTGTATCTTTATTATCTGTTGACATTTAATTTTTGACGTCAATAGTTTTTAGGA ATTGTATTTGCTGTCGTTGTGTATATTATAAAACT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9269#0      CCAGAATTCGGCAATGGGGCTTTTCTGTTATGAACCCCATTATCGCAGCAACATAGTGTA 60
consensus_9269#2      ------------------------------------------------------------
consensus_9269#1      ------------------------------------------------------------
                                                                                  

consensus_9269#0      GCTAGTATCGGAAGCTTGTTGGGCAATTTGCCTTTACAAGGTGATTCAAGTTTACAACAA 120
consensus_9269#2      ------------------------------------------------------------
consensus_9269#1      ------------------------------------------------------------
                                                                                  

consensus_9269#0      AAAACGCCACTTATCCCTGGGGGTTCAGTCAATCTTAACTTACATGCGTCTGACAATGCC 180
consensus_9269#2      ------------------------------------------------------------
consensus_9269#1      ------------------------------------------------------------
                                                                                  

consensus_9269#0      GCCAGCATTCCGAGTAGAACACCTTGTACTCCGCTCACTTTATCTACACCGTTGCAAGAC 240
consensus_9269#2      ------------------------------------------------------------
consensus_9269#1      ------------------------------------------------------------
                                                                                  

consensus_9269#0      CGAGATGGTGCAATCCCAGTACCTCAATTACAGAATATTGTATGTACAGTATATTTAGGA 300
consensus_9269#2      ------------------------------------------------------------
consensus_9269#1      ------------------------------------------------------------
                                                                                  

consensus_9269#0      TGTAAATTAAATCTGAAGAATATAGCACTTAGTGCTCGAAATGCTGAATACAATCCAAAA 360
consensus_9269#2      ------------------------------------------------------------
consensus_9269#1      ------------------------------------------------------------
                                                                                  

consensus_9269#0      CGTTTTGCTGCAGTTATAATGCGCATACGTGAACCTCGGACAACTGCTTTAATTTTTTCT 420
consensus_9269#2      ------------------------------------------------------------
consensus_9269#1      ------------------------------------------------------------
                                                                                  

consensus_9269#0      TCTGGTAAAATGGTGTGTACAGGTGCAAAAAGTGAAGAGCAAGCAAGACTAGCTGCAAGA 480
consensus_9269#2      ------------------------------------------------------------
consensus_9269#1      ------------------------------------------------------------
                                                                                  

consensus_9269#0      AAATATGCTCGTATTATTCAAAGGCTTGGGTTTGAAGCTCATTTCAAAGAGTTCAAAATT 540
consensus_9269#2      ------------------------------------------------------------
consensus_9269#1      ------------------------------------------------------------
                                                                                  

consensus_9269#0      CAAAATANTGGTTGGNTTCGTGTGATG-TCCGCT------TTCATATACGTCTTG---AA 590
consensus_9269#2      ---------------TTCGGCACGAGGGTCCGCT------TTCATATACGTCTTG---AA 36
consensus_9269#1      --TCCGAGGCCAAAATTCGGCACGAGGGGCTAATAGTTTGTTAAGATTTGTCGCTCATAA 58
                                      *  *   ** *  *   *      ** * **  ***      **

consensus_9269#0      GGTTTAGTATTGTCACAAGGTCAATTTGCAACCTATGAGCCAG---AATTATTCCCTGGG 647
consensus_9269#2      GGTTTAGTATTGTCACAAGGTCAATTTGCAACCTATGAGCCAG---AATTATTCCCTGGG 93
consensus_9269#1      CATTTTGAATCCCTTTGGACATAGTACGACGTCGCTGTTCTAGGTAAATCATTCTTCTGG 118
                        *** * **            * *  *    *  **  * **   *** ****    **

consensus_9269#0      TTAATTTATCGTATGACTAAACCA----------AAGATAGTCCTACTAGTCTTTG---- 693
consensus_9269#2      TTAATTTATCGTATGACTAAACCA----------AAGATAGTCCTACTAGTCTTTG---- 139
consensus_9269#1      TTGGACTTTTCTGTTATGAACCCCTTATCGCAGCAACATAGTGTAGCTAGTATCGGAAGC 178
                      **    * *  * * *  ** **           ** *****    ***** *  *    

consensus_9269#0      TTTCTGGGAAGATTGTTCTA-CAGGAGCAA--AGGGTCGTGAAGAAATT-ATGAAGCTTT 749
consensus_9269#2      TTTCTGGGAAGATTGTTCTAACAGGAGCAA--AGGTTCGTGAAGAAATTTATGAAGCTTT 197
consensus_9269#1      TTGTTGGGCAATTTGCCTTTACAAGGTGATTCAAGTTTACAACAAAAAACGCCACTTATC 238
                      **  **** *  ***   *  ** *   *   * * *    *  ***      *    * 

consensus_9269#0      -AATA-CATCTATCCA-TTNTGAANAATTT--AAAAATCTGATAA-GATCCTAGA-CCCT 802
consensus_9269#2      TAATAACATCTATCCAATTTTGAAAAATTTTAAAAAATCTGATAAAGATCCTAGAGCCCT 257
consensus_9269#1      CCTGGGGGTTCAGTCAATCTT----AACTTACATGCGTCTGACAATGCCGCCAGCATTCC 294
                              *  *  ** *  *    ** **  *    ***** ** *   * **    * 

consensus_9269#0      CAC-TCGT-ATCAAAT-AT-TGCATC-ATTNACT--G-----ACTAA-TATAAATACCCA 849
consensus_9269#2      CACATCGTCATCAAATTATATGCATCCATTAACTTGA-----ACTAAATATAAATAACCA 312
consensus_9269#1      GAGTAGAACACCTTGTACTCCGCTCACTTTATCTACACCGTTGCAAGACCGAGATGGTGC 354
                       *       * *   *  *  **     **  **         * *     * **     

consensus_9269#0      ATTGTTTTTTTCTC---CACGTTATTTTTTACTGCTTTTCTTACTAAGGAT-TAAAACAA 905
consensus_9269#2      ATTGTTTTTTTCTC---CACGTTATTTTTTACTGCTTTTCTTACTAAGGAT-TAAAACAA 368
consensus_9269#1      AATCCCAGTACCTCAATTACAGAATATTGTA-TGTACAGTATATTTAGGATGTAAATTAA 413
                      * *     *  ***    **   ** ** ** **       ** * ***** ****  **

consensus_9269#0      ACCGACATCATAAGATACTTT---TTCTCAGTTTTTAC--CAATTGAATTAGTCATGCTA 960
consensus_9269#2      ACCGACATCATAAGATACTTT---TTCTCAGTTTTTAC--CAATTGAATTAGTCATGCTA 423
consensus_9269#1      ATCTGAAGAATATAGCACTTAGTGCTCGAAATGCTGAATACAATCCAAAACGTTTTGCTG 473
                      * *   *  ***    ****     **  * *  * *   ****  **   **  **** 

consensus_9269#0      ACAGCATTAAAAAC-TATGTAAATCTCTATGAAACAACAAGCTGTATATTCCTCG-AAAT 1018
consensus_9269#2      ACAGCATTAAAAAC-TATGTAAATCTCTATGAAACAACAAGCTGTATATTCCTCG-AAAT 481
consensus_9269#1      CAGTTATAATGCGCATACGTGAACCTCGGACAACTGCTTTAATTTTTTCTTCTGGTAAAA 533
                           ** *    * ** ** ** ***    **         * * *  * ** * *** 

consensus_9269#0      CCATGAATT---ATTTGAGCACTCTTTACACATTAAGATTTTCTGCTCG----TCCCTCA 1071
consensus_9269#2      CCATGAATT---ATTTGAGCACTCTTTACACATTAAGATTTTCTGCTCG----TCCCTCA 534
consensus_9269#1      TGGTGTGTACAGGTGCAAAAAGTGAAGAGCAAGCAAGACTAGCTGCAAGAAAATATGCTC 593
                         **  *     *   *  * *    *   *  **** *  ****  *    *      

consensus_9269#0      CTATTTTTCCAAGTGTATCTTTATTATCTGTTGACATTTAATTTTTGACGTCAATAGTTT 1131
consensus_9269#2      CTATTTTTCCAAGTGTATCTTTATTATCTGTTGACATTTAATTTTTGACGTCAATAGTTT 594
consensus_9269#1      GTATTATTCAAAGGCTTGGGTTTGAAGCTCATTTCANAGAGTTCAAAATTCAAAATATGG 653
                       **** *** ***  *    **   * **  *  **   * **    *    **   *  

consensus_9269#0      TTAGGAATTGTATTTGCTGTCGTTGTGAATATTATAAAACT------------------- 1172
consensus_9269#2      TTAGGAATTGTATTTGCTGTCGTTGTGTATATTATAAAACT------------------- 635
consensus_9269#1      TTGGTTCGTGTGATGTCCGCTTTCATATACGTCTTGAAGGTTTAGTATTGTCACAAGGTC 713
                      ** *    ***  *  * *   *  *  *  *  * **  *                   

consensus_9269#0      ---------------
consensus_9269#2      ---------------
consensus_9269#1      AATTTGCAACCTATG 728
                                     




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)