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Schistosoma mansoni
cluster # 9272 cluster # 9272       Sequences # 9       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9272#0 length = 925 sequences # 9  

consensusID : consensus_9272#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 925
fasta sequence
                              [GAATCTGGGTTCTAATGGTTCCTTCGGACTCCCTTGATCTTGGGGATTCCTGGATAGAAGTCACTCCACAAAGTCTGGGTTACAACCAAAATGGTTCTAGCTATTCAGGTTTCCAGGAACCTGGCGGTCTCCATACCATAGTTGAAGAAAGATTACTGACTCTCTTCCTCTCAGAAGCTCAAGAACATTCAGATAAAACAAGCGATGGTTCTCTGCCTAGCCCATTATCACACGACGAACTTCACAGTGGTGATACATCCGAACAGTCTCACTCTACTTATCAAAATATAAGTATGACCAAGTCCTCCACTGCGAGTTTTCCAACTGATTTTCCAGTTACAAGCTCGGGAGAATGGGCTAGTCGACCTGAAGTTGGAGCGTATACTGCACTGGTATGTCAGACAAATGA-TTCTAAAGAAAGCTTATCCGGTCATCTTAATTGCTCGTCTCCAATTAAGGGCTCGTGGCGTCTGCGCAACTCGGCTTTTATGAAATCGCGTTTCATTGGTTGGTTGCTTGATCATATTCCAAATATATTAAGCCATGCGACTACATTCCTGTTGGGAGCAATTACCATGCTTTTATTCATCCGAAAACGTGCAAGGTTCACAAAAGTGTTGAACATACCTTTGGATTAAATCACTCGATTTGATCAATCAAAAAAAATATTTTTTACTATAAAATTCATTCATCAGTTTATACATTCACATGCATATTAAAGGTGAAATAGGTTTTCTGCTGGTTTCTTTTTATCCTCCTCTTAATTACCATTTCTTTTTTGCCATATATGTTTAACATTGTGATTATTATTATTGGTGTCTTTGGCCTTTAACCATATTATAAATATCATTTCCTCATTATTAACTCCAAACTAAATCGCACATATACATTTGTATACACATTTGTGGTTCTTTTATTTTGCATA]

[+] EMBL CD189540             [GAATCTGGGTTCTAATGGTTCCTTCGGACTCCCTTGATCTTGGGGATTCCTGGATAGAAGTCACTCCACAAAGTCTGGGTTACAACCAAAATGGTTCTAGCTATTCAGGTTTCCAGGAACCTGGCGGTCTCCATACCATAGTTGAAGAAAGATTACTGACTCTCTTCCTCTCAGAAGCTCAAGAACATTCAGATAAAACAAGCGATGGTTCTCTGCCTACCCCATTATCACACGACGAACTTCACAGTGGTGATACATCCGga                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AI975234             [                  TTCCTTCGGACTCCCTTGATCTTGGGGATTCCTGGATAGAAGTCACTCCACAAAGTCTGGGTTACAACCAAAATGGTTCTAGCTATTCAGGTTTCCAGGAACCTGGCGGTCTCCATACCATAGTTGAAGAAAGATTACTGACTCTCTTCCTCTCAGAAGCTCAAGAACATTCAGATAAAACAAGCGATGGTTCTCTGCCTAGCCCATTATCACACGACGAACTTCACAGTGGTGATACATCCGAACAGTCTCACTCTACTTATCAAAATATAAGTATGACCAAGTCCTCCACTGCGAGTTTTCCAACTGATTTTCCAGTTACAAGCTCGGGAGAATGGGCTAGTCGACCTGAAGTTGGAGCGTATACTGCACTGGTATGTCAGACAAATGA TTCTAAAGAAAGCTTATCCGGTCATCTTAATTGCTCGTCTCCAATTAAGGGCTCGTGGCGTCTGCGCAACTCGGCTATTATGAAAACGCGTTTCATTGGTTGGTTGCTTGATCATATTCCAAATATATTAAGCCATGCGACTACATTCCTGTTGGGAGCAATTACCATGC                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD070098             [                                                                                                                                                          ACTGACTCTCTTCCTCTCAGAAGCTCAAGAACATTCAGATAAAACAAGCGATGGTTCTCTGCCTAGCCCATTATCACACGACGAACTTCACAGTGGTGATACATCCGAACAGTCTCACTCTACTTATCAAAATATAAGTATGACCAAGTCCTCCACTGCGAGTTTTCCAACTGATTTTCCAGTTACAAGCTCGGGAGAATGGGCTAGTCGACCTGAAGTTGGAGCGTATACTGCACTGGTATGTCAGACAAATGA TTCTAAAGAAAGCTTATCCGGTCATCTTAATTGCTCGTCTCCAATTAAGGGCTCGTGGCGTCTGCGNCACTCGGCTTTTATGAAATCGCGTTTC                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD070047             [                                                                                                                                                                                                                                                                                                                                                                      TAGTCGACCTGAAGTTGGAGCGTATACTGCACTGGTATGTCAGACAAATGA TTCTAAAGAAAGCTTATCCGGTCATCTTAATTGCTCGTCTCCAATTAAGGGCTCGTGGCGTCTGCGCAACTCGGCTTTTATGAAATCGCGTTTCATTGGTTGGTTGCTTGATCATATTCCAAATATATTAAGCCATGCGACTACATTCCTGTTGGGAGCAATTACCATGCTTTTATTCATCCGAAAACGTGCAAGGTTCACAAAAGTGTTGAACATACCTTTGGATTAAATCACTCGATTTGATCAATCAAAAAAAATATTTTTTACTATAAAATTCATTCATCAGTTTATACATTCACATGCATATTAAAGGTGAAATAGGTTTTCTGCTGGT                                                                                                                                                                                      ]
[-] EMBL CD070178             [                                                                                                                                                                                                                                                                                                                                                                                                     CTGGTATGTCAGACAAATGA TTCTAAAGAAAGCTTATCCGGTCATCTTAATTGCTCGTCTCCAATTAAGGGCTCGTGGCGTCTGCGCAACTCGGCTTTTATGAAATCGCGTTTCATTGGTTGGTTGCTTGATCATATTCCAAATATATTAAGCCATGCGACTACATTCCTGTTGGGAGCAATTACCATGCTTTTATTCATCCGAAAACGTGCAAGGTTCACAAAAGTGTTGAACATACCTTTGGATTAAATCACTCGATTTGATCAATCAAAAAAAATATTTTTTACTATAAAATTCATTCATCAGTTTATACATTCACATGCATATTAAAGGTGAAATAGGTTTTCTGCTGGT                                                                                                                                                                                      ]
[-] EMBL CD070181             [                                                                                                                                                                                                                                                                                                                                                                                                      TGGTATGTCAGACAAATGA TTCTAAAGAAAGCTTATCCGGTCATCTTAATTGCTCGTCTCCAATTAAGGGCTCGTGGCGTCTGCGCAACTCGGCTTTTATGAAATCGCGTTTCATTGGTTGGTTGCTTGATCATATTCCAAATATATTAAGCCATGCGACTACATTCCTGTTGGGAGCAATTACCATGCTTTTATTCATCCGAAAACGTGCAAGGTTCACAAAAGTGTTGAACATACCTTTGGATTAAATCACTCGATTTGATCAATCAAAAAAAATATTTTTTACTATAAAATTCATTCATCAGTTTATACATTCACATGCATATTAAAGGTGAAATAGGTTTTCTGCTGGT                                                                                                                                                                                      ]
[-] EMBL CD070167             [                                                                                                                                                                                                                                                                                                                                                                                                       GGTATGTCAGACAAATGA TTCTAAAGAAAGCTTATCCGGTCATCTTAATTGCTCGTCTCCAATTAAGGGCTCGTGGCGTCTGCGCAACTCGGCTTTTATGAAATCGCGTTTCATTGGTTGGTTGCTTGATCATATTCCAAATATATTAAGCCATGCGACTACATTCCTGTTGGGAGCAATTACCATGCTTTTATTCATCCGAAAACGTGCAAGGTTCACAAAAGTGTTGAACATACCTTTGGATTAAATCACTCGATTTGATCAATCAAAAAAAATATTTTTTACTATAAAATTCATTCATCAGTTTATACATTCACATGCATATTAAAGGTGAAATAGGTTTTCTGCTGGT                                                                                                                                                                                      ]
[-] EMBL CD070104             [                                                                                                                                                                                                                                                                                                                                                                                                                      TGATTTCTAAAGAAAGCTTATCCGGTCATCTTAATTGCTCGTCTCCAATTAAGGGCTCGTGGCGTCTGCGCAACTCGGCTTTTATGAAATCGCGTTTCATTGGTTGGTTGCTTGATCATATTCCAAATATATTAAGCCATGCGACTACATTCCTGTTGGGAGCAATTACCATGCTTTTATTCATCCGAAAACGTGCAAGGTTCACAAAAGTGTTGAACATACCTTTGGATTAAATCACTCGATTTGATCAATCAAAAAAAATATTTTTTACTATAAAATTCATTCATCAGTTTATACATTCACATGCATATTAAAGGTGAAATAGGTTTTCTGCTGGT                                                                                                                                                                                      ]
[-] EMBL CD178331             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTTATGAAATCGCGTTTCATTGGTTGGTTGCTTGATCATATTCCAAATATATTAAGCCATGCGACTACATTCCTGTTGGGAGCAATTACCATGCTTTTATTCATCCGAAAACGTGCAAGGTTCACAAAAGTGTTGAACATACCTTTGGATTAAATCACTCGATTTGATCAATCAAAAAAAATATTTTTTACTATAAAATTCATTCATCAGTTTATACATTCACATGCATATTAAGGGTGAAATAGGTTTTCTGCTGGTTTCTTTTTATCCTCCTCTTAATTACCATTTCTTTTTTGCCATATATGTTTAACATTGTGATTATTATTATTGGTGTCTTTGGCCTTTAACCATATTATAAATATCATTTCCTCATTATTAACTCCAAACTAAATCGCACATATACATTTGTATACACATTTGTGGTTCTTTTATTTTGCATA]


>consensus_9272#0 GAATCTGGGTTCTAATGGTTCCTTCGGACTCCCTTGATCTTGGGGATTCCTGGATAGAAG TCACTCCACAAAGTCTGGGTTACAACCAAAATGGTTCTAGCTATTCAGGTTTCCAGGAAC CTGGCGGTCTCCATACCATAGTTGAAGAAAGATTACTGACTCTCTTCCTCTCAGAAGCTC AAGAACATTCAGATAAAACAAGCGATGGTTCTCTGCCTAGCCCATTATCACACGACGAAC TTCACAGTGGTGATACATCCGAACAGTCTCACTCTACTTATCAAAATATAAGTATGACCA AGTCCTCCACTGCGAGTTTTCCAACTGATTTTCCAGTTACAAGCTCGGGAGAATGGGCTA GTCGACCTGAAGTTGGAGCGTATACTGCACTGGTATGTCAGACAAATGATTCTAAAGAAA GCTTATCCGGTCATCTTAATTGCTCGTCTCCAATTAAGGGCTCGTGGCGTCTGCGCAACT CGGCTTTTATGAAATCGCGTTTCATTGGTTGGTTGCTTGATCATATTCCAAATATATTAA GCCATGCGACTACATTCCTGTTGGGAGCAATTACCATGCTTTTATTCATCCGAAAACGTG CAAGGTTCACAAAAGTGTTGAACATACCTTTGGATTAAATCACTCGATTTGATCAATCAA AAAAAATATTTTTTACTATAAAATTCATTCATCAGTTTATACATTCACATGCATATTAAA GGTGAAATAGGTTTTCTGCTGGTTTCTTTTTATCCTCCTCTTAATTACCATTTCTTTTTT GCCATATATGTTTAACATTGTGATTATTATTATTGGTGTCTTTGGCCTTTAACCATATTA TAAATATCATTTCCTCATTATTAACTCCAAACTAAATCGCACATATACATTTGTATACAC ATTTGTGGTTCTTTTATTTTGCATA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)