These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9281#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 934 fasta sequence [CTTTGACATGGGCTCGTGCCAATATCAATAAAACCGGAAGCAACAGCGAAAATAGACCTATTTCTACAAACGACAGAATTAGTAGTCGGAGTCCTGCTATGGCAGGCGTCAAGAAGCATTCAGGAATAAAATTGCTAGAGTTTGATGAACTACCTGCATTCGGACCGAAAGCTAAACAACTTCGTAAAGAAAAAGAGCGCGAAACGAAAATGAAACTTAAACAAGAGAAAGAGGAGAGAGCCCGTGAGAATAAGGCCGCTCGAGAAGCTTCCAGATTAGCTCGTCAATCTGAACGACAGGCTTTACTCGAAGCTCGCAGACAAAATATGTCCATCTCATCTCCGTGGTCAAATAATCATCAAGAACTTTTGGAAAATAAAACTGAGATGCAAAGTAT-GTCGTTGAACTCCAATTCTAAATTTATGGGTTATGATCCAGGTGCCTTTGAAACTAAACCATCTTTTACAGTTTCATCGAAAAATTTCCCACAAGATTTACCACATAAGACGGAACCAAATAATCATCGCCAGTTCCCACTTCACCTTACATATTCAAACGTTCCGAATCGCCTTATTTCTCNCCCAACAAATATTGACATTAAACCAATCATTCATCATCCGCTTCTGTCTTCATCTGTCCCTGTTGGTTCCTAAAATAGTACAATGTATGTTGAAGAAGAAGATGATGATGACGATGACATGCTACAAAATGGTGAATCCGGAGTGTACACTCTTGGATTTCCTAAAACCTTCAGTTTCAACTCACCTTTTAGTGCTAATCTTACTGGTATCCAATCTTCTAGTTTCCCATCTGGCCCTATGACGTCATTTGCCGGGATTCACTCATCAAATTCACAATCAATCAGTAATATACCGGTCTCCAACTTAGGACAGACCCATTTTGTTCAATGTCTTCCTCCCAATTATTCTAATGT] [+] EMBL CD092871 [CTTTGACATGGGCTCGTGCCAATATCAATAAAACCGGAAGCAACAGCGAAAATAGACCTATTTCTACAAACGACAGAATTAGTAGTCGGAGTCCTGCTATGGCAGGCGTCAAGAAGCATTCAGGAATAAAATTGCTAGAGTTTGATGAACTACCTGCATTCGGACCGAAAGCTAAACAACTTCGTAAAGAAAAAGAGCGCGAAACGAAAATGAAACTTAAACAAGAGAAAGAGGAGAGAGCCCGTGGGAATAAGGCCGCTCGAGAAGCTTCCAGATTAGCTCGTCAATCTGAACGACAGGCTTTACTCGAAGCTCGCAGACAAAATATGTCCATCTCATCTCCGTGGTCAAATAATCATCAAGAACTTTTGGAAAATAAAACTGAGATGCAAAGTAT GTCGTTGAACTCCAATTCTAAATTTATGGGTTATGATCCAGGTGCCTTTGAAACTAAACCATCTTTTACAGTTTCATCGAAAAATTTCCCACAAGATTTACCACATAAGACGGAACCAAATAATCATCGCCAGTTCCCACTTCACCTTACAT ] [+] EMBL CD093564 [ ACAGCGAAAATAGACCTATTTCTACAAACGACAGAATTAGTAGTCGGAGTCCTGCTATGGCAGGCGTCAAGAAGCATTCAGGAATAAAATTGCTAGAGTTTGATGAACTACCTGCATTCGGACCGAAAGCTAAACAACTTCGTAAAGAAAAAGAGCGCGAAACGAAAATGAAACTTAAACAAGAGAAAGAGGAGAGAGCCCGTGAGAATAAGGCCGCTCGAGAAGCTTCCAGATTAGCTCGTCAATCTGAACGACAGGCTTTACTCGAAGCTCGCAGACAAAATATGTCCATCTCATCTCCGTGGTCAAATAATCATCAAGAACTTTTGGAAAATAAAACTGAGATGCAAAGTAT GTCGTTGAACTCCAATTCTAAATTTATGGGTTATGATCCAGGTGCCTTTGGAACTAAACCATCTTTTACAGTTTCATCGAAAAATTTCCCACAAGATTTACCACATAAGACGGAACCCAATAATCATCGCC ] [+] EMBL CD093587 [ ACAGCGAAAATAGACCTATTTCTACAAACGACAGAATTAGTAGTCGGAGTCCTGCTATGGCAGGCGTCAAGAAGCATTCAGGAATAAAATTGCTAGAGTTTGATGAACTACCTGCATTCGGACCGAAAGCTAAACAACTTCGTAAAGAAAAAGAGCGCGAAACGAAAATGAAACTTAAACAAGAGAAAGAGGAGAGAGCCCGTGAGAATAAGGCCGCTCGAGAAGCTTCCAGATTAGCTCGTCAATCTGAACGACAGGCTTTACTCAAAGCTCGCAGACAAAATATGTCCATCTCATCTCCGTGGTCAAATAATCATCA ] [+] EMBL CD093532 [ ACAGCGAAAATAGACCTATTTCTACAAACGACAGAATTAGTAGTCGGAGTCCTGCAATGGCAGGCGTCAAGAAGCATTCAGGAATAAAATTGCTAGAGTTTGATGAACTACCTGCATTCGGACCGAAAGCTAAACAACTTCGTAAAGAAAAAGAGCGCGAAACGAAAATGAAACTTAAACAAGAGAAAGAGGAGAGAGCCCGTGAGAATAAGGCCGCTCGAGAAGCTTCCAGATTAGCTCGTCAATCTGAACGACAGGCTTTACTCGAAGCTCGCAGACAAAATATGTCCATCTCATCTCCGTGGTCAAATAATCATCAAGAACTTTTGGAAAATAAAACTGAGATGCAAAGTATGGTCGTTGAACTCCAATTCTAAATTTATGGGTTATGATCCAGGTTGCTTTGAAACTAAACCATCTT ] [+] EMBL CD093571 [ ACAGCGAAAATAGACCTATTTCTACAAACGACAGAATTAGTAGTCGGAGTCCTGCTATGGCAGGCGTCAAGAAGCATTCAGGAATAAAATTGCTAGAGTTTGATGAACTACCTGCATTCGGACCGAAAGCTAAACAACTTCGTAAAGAAAAAGAGCGCGAAACGAAAATGAAACTTAAACAAGAGAAAGAGGAGAGAGCCCGTGAGAATAAGGCCGCTCGAGAAGCTTCCAGATTAGCTCGTCAATCTGAACGACAGGCTTTACTCGAAGCTCGCAGACNAAATATGTCCATCTCATCTCCGTGGTCAAATAATCATCAAGAACTTTTGGAAAATAAAACTGAGATGCAAAGTAT GTCGTTGAACTCCTATTCTAAATTTATGGGTTATGATCCAGGTGCCTTTGAAACTAAACCATCTTTTACAGTTTCATCGAAAAATTTCCCACAAGA ] [-] EMBL CD093502 [ TGCTAGAGTTTGATGAACTACCTGCACTCGGACCGAAAGCTAAACAACTTCGTAAAGAAAAAGAGCGCGAAACGAAAATGAAACTTAAACAAGAGAAAGAGGAGAGAGCCCGTGAGAATAAGGCCGCTCGAGAAGCTTCCAGATTAGCTCGTCAATCTGAACGACAGGCTTTACTCGAAGCTCGCAGACAGAATATGTCCATCTCATCTCCGTGGTCAAATAATCATCAAGAACTTTTGGAAAATAAAACTGAGATGCAAAGTAT GTCGTTGAACTCCAATTCTAAATTTATGGGTTATGATCCAGGTGCCTTTGAAACTAAACCATCTTTTACAGTTTCATCGAAAAATTTCCCACAAGATTTACCACATAAGACGGAACCAAATAA ] [+] EMBL CD134218 [ GCTAAACAACTTCGTAAAGAAAAAGAGCGCGAAACGAAAATGAAACTTAAACAAGAGAAAGAGGAGAGAGCCCGTGAGAATAAGGCCGCTCGAGAAGCTTCCAGATTAGCTCGTCAATCTGAACGACAGGCTTTACTCGAAGCTCGCAGACAAAATATGTCCATCTCATCTCCGTGGTCAAATAATCATCAAGAACTTTTGGAAAATAAAACTGAGATGCAAAGTAT GTCGTTGAACTCCAATTCTAAATTTATGGGTTATGATCCAGGTGCCTTTGAAACTAAACCATCTTTTACAGTTTCATCGAAAAATTTCCCACAAGATTTACCACATAAGACGGAACCAAATAATCATCGCCAGTTCCCACTTCACCTTACATATTCAAACGTTCCGAATCGCCTTATTTCTCNCCCAACAAATATTGACATTAAACCAATCATTCATCATCCGCTTCTGTCTTCATCT ] [+] EMBL CD134358 [ GCTAAACAACTTCGTAAAGAAAAAGAGCGCGAAACGAAAATGAAACTTAAACAAGAGAAAGAGGAGAGAGCCCGTGAGAATAAGGCCGCTCGAGAAGCTTCCAGATTAGCTCGTCAATCTGAACGACAGGCTTTACTCGAAGCTCGC ] [-] EMBL CD066875 [ ACTAAACCATCTTTTACAGTTTCATCGAAAAATTTCCCACAAGATTTACCACATAAGACGGAACCAAATAATCATCGCCAGTTCCCACTTCACCTTACATATTCAAACGTTCCGAATCGCCTTATTTCTCCCCAAACAAATATTGACATTAAACCAATCATTCATCATCCGCTTCTGTCTTCATCTGTCCCTGTTGGTTCCTAAAATAGTACAATGTATGTTGAAGAAGAAGATGATGATGACGATGACATGCTACAAAATGGTGAATCCGGAGTGTACACTCTTGGATTTCCTAAAACCTTCAGTTTCAACTCACCTTTTAGTGCTAATCTTACTGGTATCCAATCTTCTAGTTTCCCATCTGGCCCTATGACGTCATTTGCCGGGATTCACTCATCAAATTCACAATCAATCAGTAATATACCGGTCTCCAACTTAGGACAGACCCATTTTGTTCAATGTCTTCCTCCCAATTATTCTAATGT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||