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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9290#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 918 fasta sequence
[CCTCCGAGCCAANAATTCGGCACGAGGAGAGTCCATTAATGGTATTGAAATGACTGTGACATATCCTGCAGAATCACATCACTTTACTAGATATGCCAACTCCTCTCGTCATATTATTCAGGAGACTCCTGCATTGTATAAGGATGTCATTCTCCCTTTTTTGTCCCAGAAACCCAAGGATCTTACTTGGATTGATAATGTAGTAGCAGGAATCGCTGAACAAGATCGTACTCTTCACAATGATGCTGATGAAATGTTTGGTTTTACATTAGTATTAGATTACCGATGGGATGGGTTACGCATTCAAGAACTTCATTGTTTGGGTATTGCTCATGACCAAAAGCTAACTTGTCTACGGGATCTCCGTAGCTGCCATGTTCCAATGCTAAAAAGAATTTTACAGCTAGGTCGTGATACACTCTTTCGCAAATATTCGAAGTCAGAAACATCCGACAATCAAATGTCTGGTGATAATTCGAAAATTATTTTATCAAAAGACCAAATTCTTGCATATATACATTATCCACCGACCTTCTACAGATTTCATGTTCACTTTGTGCACATCGATTCTGGAGACAACTATGGCACTAATGCATGTAGAGCACATATACTCGAAGAAGTTATTCGAAATCTCGAACAAGATGATTTATACTAT-GCAAATCGTACAATCACTATGTTTTTGCAT-GCTAATAAT-CCCATGTTTACAGCTATTTGTCA-GAACAGTTCCCACATATCCATTGT-CGATTCAGCTCCTGAATAAATTCCATATGTAGTGTCGTATTTTAG-AAGCAATGTAAGATTCCGCACTATTCAAACTTTGTAATAAAATCGTCTTAGTAAATAAAAATAAACTTATCCGAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA]
[+] EMBL CD080517 [CCTCCGAGCCAANAATTCGGCACGAGGAGAGTCCATTAATGGTATTGAAATGACTGTGACATATCCTGCAGAATCACATCACTTTACTAGATATGCCAACTCCTCTCGTCATATTATTCAGGAGACTCCTGCATTGTATAAGGATGTCATTCTCCCTTTTTTGTCCCAGAAACCCAAGGATCTTACTTGGATTGATAATGTAGTAGCAGGAATCGCTGAACAAGATCGTACTCTTCACAATGATGCTGATGAAATGTTTGGTTTTACATTAGTATTAGATTACCGATGGGATGGGTTACGCATTCAAGAACTTCATTGTTTGGGTATTGCTCATGACCAAAAGCTAACTTGTCTACGGGATCTCCGTAGCTGCCATGTTCCAATGCTAAAAAGAATTTTACAGCTAGGTCGTGATACACTCTTTCGCAAATATTCGAAGTCAGAAACATCCGACAATCAAATGTCTGGTGATAATTCGAAAATTATTTTATCAAAAGACCAAATTCTTGCATATATACATTATCCACCGACCTTCTACAGATTTCATGTTCACTTTGTGCACATCGATTCTGGAGACAACTATGGCACTAATGCATGTAGAGCACATATACTCGAAGAAGTTATTCGAAATCTCGAACAAGATGATTTATACTATNGC AATCGTACAATCACTATGTTTTTGCAT GCTAATAATCCCCATG TTACAGCTATTTGTCA GAACAG TCCCACATATNCATTGT CGATTCAGCTCCTGAATAAA TCCATATGTAGTGTCGTA TTTAGAAAGC ATGT AGATTCCCGACTA TCAAACTTNGT ATANAATCG ]
[-] EMBL CD156092 [ TACTAGATATGCCAACTCCTCTCGTCATATTATTCAGGAGACTCCTGCATTGTATAAGGATGTCATTCTCCCTTTTTTGTCCCAGAAACCCAAGGATCTTACTTGGATTGATAATGTAGTAGCAGGAATCGCTGAACAAGATCGTACTCTTCACAATGATGCTGATGAAATGTTTGGTTTTACATTAGTATTAGATTACCGATGGGATGGGTTACGCATTCAAGAACTTCATTGTTTGGGTATTGCTCATGACCAAAAGCTAACTTGTCTACGGGATCTCCGTAGCTGCCATGTTCCAATGCTAAAAAGAATTTTACAGCTAGGTCGTGATACACTCTTTCGCAAATATTCGAAGTCAGAAACATCCGACAATCAAATGTCTGGTGATAATTCGAAAATTATTTTATCAAAAGACCAAATTCTTGCATATATACATTATCCACCGACCTTCTACAGATTTCATGTTCACTTTGTGCACATCGATTCTGGAGACAACTATGGCA ]
[-] EMBL CD155964 [ TACTAGATATGCCAACTCCTCTCGTCATATTATTCAGGAGACTCCTGCATTGTATAAGGATGTCATTCTCCCTTTTTTGTCCCAGAAACCCAAGGATCTTACTTGGATTGATAATGTAGTAGCAGGAATCGCTGAACAAGATCGTACTCTTCACAATGATGCTGATGAAATGTTTGGTTTTACATTAGTATTAGATTACCGATGGGATGGGTTACGCACTCAAGAACTTCATTGTTTGGGTATTGCTCATGACCAAAAGCTAACTTGTCTACGGGATCTCCGTAGCTGCCATGTTCCAATGCTAAAAAGAATTTTACAGCTAGGTCGTGATACACTCTTTCGCAAATATTCGGAGTCAGAAACATCCGACAATCAAATGTCTGGTGATAATTCGAAAATTATTTTATCAAAAGACCAAATTCTTGCATATATACATTATCCACCGACCTTCTACAGATTTCATGTTCACTTTGTGCACATCGATTCTGGAGACAACTATGGCA ]
[-] EMBL CD060617 [ ATGTAGTAGCAGGAATCGCTGAACAAGATCGTACTCTTCACAATGATGCTGATGAAATGTTTGGTTTTACATTAGTATTAGATTACCGATGGGATGGGTTACGCATTCAAGAACTTCATTGTTTGGGTATTGCTCATGACCAAAAGCTAACTTGTCTACGGGATCTCCGTAGCTGCCATGTTCCAATGCTAAAAAGAATTTTACAGCTAGGTCGTGATACACTCTTTCGCAAATATTCGAAGTCAGAAACATCCGACAATCAAATGTCTGGTGATAATTCGAAAATTATTTTATCAAAAGACCAAATTCTTGCATATATACATTATCCACCGACCTACTACAGATTTCATGTTCACTTTGTGCACATCGATTCTGGAGACAACTATGGCACTAATGCATGTAGAGCACATATACTCGAAGAAGTTATTCGAAATCTCGAACAAGATGATTTATACTAT GCAAtcacc ]
[+] EMBL CD178774 [ CGTACTCTTCACAATGATGCTGATGAAATGTTTGGTTTTACATTAGTATTAGATTACCGATGGGATGGGTTACGCATTCAAGAACTTCATTGTTTGGGTATTGCTCATGACCAAAAGCTAACTTGTCTACGGGATCTCCGTAGCTGCCATGTTCCAATGCTAAAAAGAATTCTACAGCTAGGTCGTGATACACTCTTTCGCAAATATTCGAAGTCAGAAACATCCGACAATCAAATGTCTGGTGATAATTCGAAAATTATTTTATCAAAAGACCAAATTCTTGCATATATACAT ]
[-] EMBL CD074429 [ TACGCATTCAAGAACTTCATTGTTTGGGTATTGCTCATGACCAAAAGCTAACTTGTCTACGGGATCTCCGTAGCTGCCATGTTCCAATGCTAAAAAGAATTTTACAGCTAGGTCGTGATACACTCTTTCGCAAATATTCGAAGTCAGAAACATCCGACAATCAAATGTCTGGTGATAATTCGAAAATTATTTTATCAAAAGACCAAATTCTTGCATATATACATTATCCACCGACCTTCTACAGATTTCATGTTCACTTTGTGCACATCGATTCTGGAGACAACTATGGCACTAATGCATGTAGAGCACATATACTCGAAGAAGTTATTCGAAATCTCGAACAAGATGATTTATACTAT GCAAATCGTACAATCACTATGTTTTTGCAT GCTAATAAT CCCATGTTTACAGCTATTTGTCA GAACAGTTCCCACATATCCATTGT CGATTCAGCTCCTGAATAAATTCCATATGTAGTGTCGTATTTTAG AAGCAATGTAAGATTCCGCACTATTCAAACTTTGTAATAAAAT ]
[-] EMBL AI977529 [ CATCCGGCAATCAAATGTCTGGTGATAATTCGAAAATTATTTTATCAAAAGACCAAATTCTTGCATATATACATTATCCACCGACCTTCTACAAATTTCATGTTCACTTTGTGCACATCGATTCTGGAGACAACTATGGCACTAATGCATGTAGAGCACATATACTCGAAGAAGTTATTCGAAATCTCGAACAAGATGATTTATACTAT GCAAATCGTACAATCACTATGTTTTTGCAT GCTAATAAT CCCATGTTTACAGCTATTTGTCA GAACAGTTCCCACATATCCATTGT CTATTCAGCTCCTGAATAAATTCCATATGTAGGGTCGTATTTTAG AAACAATGTAAGATTCCGCACTATTCAAACTTTGTAATAAAATGGTCTTAGTAAATAAAAATAAACTTATCCGAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA]
[-] EMBL CD169495 [ ACTAT GCAAATCGTGCAATCACTATGTTTTTGCAT GCTAATAAT CCCATGTTTACAGCTATTTGTCA GAACAGTTCCCACATATCCATTGT CGATTCAGCTCCTGAATAAATTCCATATGTAGTGTCGTATTTTAG AAGCAATGTAAGATTCCGCACTATTCAAACTTTGTAATAAAATCGTCTTAGTAAATAAAAATAAA ]
[+] EMBL AW587557 [ ACAATCACTATGTTTTCGCATGGCTAATAAT CCCATGTTTACAGCTATTTGTCAGGACCAGTTCCCACATATCCATTGTCCGATTCAGCTCCTGAATAAATTCCATATGTAGTGTCGTATTTTAG AAGCAATGTAAGATTCCGCACTATTCAAACTTTGTAATAAAATCGTCTTAGTAAATAAAAATA ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||