cluster # 9297

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Schistosoma mansoni
cluster # 9297 cluster # 9297 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9297#0 length = 1312 sequences # 7

consensus_9297#1 length = 553 sequences # 1
consensus_9297#2 length = 172 sequences # 1

consensusID : consensus_9297#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1312
fasta sequence

                              [AATTTTATTTTTGGTAATTACAATTTATCGTCTGTTGGGTAAGGAAGATCTTGTACAGTCACAACAGTTATGATTAATAGCAGTTTTCTGCAAAAATGCTCAATACATGTTAATTTCATTGTTGTGTAGTCTGTACCTTACGCGCTGGCACAGTTTACTCAAATAATTTATAGGAAAATCGGATAGATTCATAACTTTAACAGAAGGCAAAACATCTACAAAAGATAACATAAGGTGTCCAATTTGATGTATTTATCTTTATTGGAAGAAACAGTTTTCCAGGTTTGGTTTTCATTTTTGAAAAAATTATAAGTAAGAAAAAACAATATCACATTTTGGTTCCTGATGTACTTTGTCACATAAAATATGCACTGGTTACTGAATATTTTTCATTCATGGATTGCACTTTACCGGGGCTTCCGGTTTATTCGATTACCTAGAAGTATGTGTACATAAACGCAGTGAACAAAGTTGTAATGCAGTAGGTAGGTAAGCCAATGGTTTTCTCGCACACAGCGACAAAATAAAAATGATATATATTGTTGATTGTCATCTGCAGTCATTTTTGGCGCTTTACAATTCAAAAGAAGTTAATGAGCAAATATTAGCGCCTCCCAAGGCGAACTGATGCTCCGAACGAACTCCGAGAACTCCCAGCACTAAGTGGGTTTCCATGGTTGTCTAGAAGACCAGTTGCCGTGGCTGGTCGCGCAGGTGGTATTGAAGTGTTCAATAGGCTTCCTGTTGTTGTGGTATTGGTGGAGGATTGATCTAAATCTTGATCTTCTGCTTCATGTTGCGAGTTGCTAGTAGTTCCGGGAACAGAGTAACTGACTAACGCACCACTAGCTGAACCTGAAACACAATTCGCTTTCCGCATGGCAATTTCCAGGAGCTCTGAATCACTCAAATTTCGGCTTGCGACTGAAAGTAATGAGAGCATTTCTTCATGAATACGTGATTCTGGGAATTCTACCTTTATAAGACGCTTTTCTGATGAGTAGTGAATAGCTATACAATCTATACTTTTCANACGATGACCACGACAGTAATAGCTCCATTCACANATTTCATTCTGTTCACTTTTATCACGAACATCCTTTACGAATAACACAGTAGCAGGAAACATTAGAGCATATTTCTCCAGACATTCATATTGCGCAAAAGATTGGCGTGTGAATTACTGTATATAGTAGTGAGGGAAATAAATTTAAAATCATTTAAGTAGATATAACATCCATCAGCAATGGAAATGTGTAACCAAAATAGGCTTCTTTATGAAAGCCGAGAATTATGGTGTACAATTAAAACT]

[+] EMBL AW017176             [AATTTTATTTTTGGTAATTACAATTTATCGTCTGTTGGGTAAGGAAGATCTTGTACAGTCACAACAGTTATGATTAATAGCAGTTTTCTGCAAAAATGCTCAATACATGTTAATTTCATTGTTGTGTAGTCTGTACCTTACGCGCTGGCACAGTTTACTCAAATAATTTATAGGAAAATCGGATAGATTCATAACTTTAACAGAAGGCAAAACATCTACAAAAGATAACATAAGGTGTCCAATTTGATGTATTTATCTTTATTGGAAGAAACAGTTTTCCAGGTTTGGTTTTCATTTTTGAAAAAATTATAAGTAAGAAAAAACAATATCACATTTTGGTTCCTGATGTACTTTGTCACATAAAATATGCACTGGTTACTGAATATTTTTCATTCATGGATTGCACTTTACCGGGGCTTCCGGTTTATTCGATTACCTAAAAGTATGTGTACATAAACGCAGTGAACAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD169693             [                                                                                                                                                                                                                                                                                                                                                                                                                        TACCGGGGCTTCCGGTTTATTCGATTACCTAGAAGTATGTGTACATAAACGCAGTGAACAAAGTTGTAATGCAGTAGGTAGGTAAGCCAATGGTTTTCTCGCACACAGCGACAAAATAAAAATGATATATATTGTTGATTGTCATCTGCAGTCATTTTTGGCGCTTTACAATTCAAAAGAAGTTAATGAGCAAATATTAGCGCCTCCCAAGGCGAACTGATGCTCCGAACGAACTCCGAGAACTCCCAGCACTAAGTGGGTTTCCATGGTTGTCTAGAAGACCAGTTGCCGTGGCTGGTCGCGCAGGTGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL AI977688             [                                                                                                                                                                                                                                                                                                                                                                                                                                              GATTACCTAGAAGTATGTGTACATAANCGCAGTGAACAAAGTTGTAATGCAGTAGGTAGGTAAGCCAATGGTTTTCTCGCACACAGCGACAAAATAAAAATGATATATATTGTTGATTGTCATCTGCAGTCATTTTTGGCGCTTTACAATTCAAAAGAAGTTAATGAGCAAATATTAGCGCCTCCCAAGGCGAACTGATGCTCCGAACGAACTCCGAGAACTCCCAGCACTAAGTGGGTTTCCATGGTTGTCTAGAAGACCAGTTGCCGTGGCTGGTCGCGCAGGTGGTATTGAAGTGTTCAATAGGCTTCCTATTGTTGTGGTATTGGTGGAGGATTGATCTAAATCTTGATCTTCTGCTTCATGTTGCGAGTTGCTAGTAGTTCCGGGAACAGAGTAACTGACTAACGCACCACTAGCTGAACCTGAAACACAATTCGCTTTCCGCATGGCAATTTCCAGGAGCTCTGAATCACTCAAATTTCGGCTTGCGACTGAAAGTAATGAGAGCATTTCTTCATGAATACGTGATTCTGGGAATTCTACCTTTATAAGACGCTTTTCTGATGAGTAGTGAATAGCTATACAATCTATACTTTTCAAACGATGACCACGACAGTAATAGCTCCATTCA                                                                                                                                                                                                                                                        ]
[+] EMBL CD065238             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTTTTCTCGCACACAGCGACAAAATAAAAATGATATATATTGTTGATTGTCATCTGCAGTCATTTTTGGCGCTTTACAATTTAAAAGAAGTTAATGAGCAAATGTTAGCGCCTCCCAAGGCGAACTGATGCTCCGAACGAACTCCGAGAACTCCCAGCACTAAGTGGGTTTCCATGGTTGTCTAGAAGACCAGTTGCCGTGGCTGGTCGCGCAGGTGGTATTGAAGTGTTCAATAGGCTTCCTGTTGTTGTGGTATTTGTGGAGGATTGATCTAAGTCTTGATCTTCTGCTTCATGTTGCGAGTTGCTAGTAGTTCCGGGAACAGAGTAACTGACTAACGCACCACTAGCTGAACCTGAAACACAATTCGCTTTCCGCATGGCAATTTCCAGGAGCTCTGAATCACTCAAATCTCGGCTTGCGACTGAAAGTAATGAGAGCATTTCTTCATGAATACGTGATTCTGGGAATTCTACCTTTATAAGACGCTTTTCTGATGAGTAGTGAATAGCTATACAATCTATACTTTTCANACGATGACCACGACAGTAATAGCTCCATTCACANATTTCATTCTGTTCACTTTTATCACGAACATCCTTTACGAATAACACAGTAGCAGGAAACATTAGAGCAT                                                                                                                                                                               ]
[+] EMBL CD201884             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTCGCACACAGCGACAAAATAAAAATGGTATATATTGTTGATTGTCATCTGCAGTCATTTTTGGCGCTTTACAATTCAAAAGAAGTTAATGAGCAAATATTAGCGCCTCCCAAGGCGAACTGATGCTCCGAACGAACTCCGAGAACTCCCAGCACTAAGTGGGTTTCCATGGTTGTCTAGAAGACCAGTTGCCGTGGCTGGTCGCGCAGGTGGTATTGAAGTGTTCAATAGGCTTCCTGTTGTTGTGGTATTGGTGGAGGATTGATCTAAATCTTGATCTTCTGCTTCATGTTGCGAGTTGCTAGTAGTTCCGGGAACAGAGTAACTGACTAACGCACCACTAGCTGAACCTGAAACACAATTCGCTTTCCGCATGGCAATTTCCAGGAGCTCTGAATCACTCAAATTTCGGCTTGCGACTGAAAGTAATGAGAGCATTTCTTCATGAATACGTGATTCTGGGAATTCTACCTTTATAAGACGCTNTTCTGATGAGTAGTGAATAGCTATACAATCTATACTTTTCANACGATGACCACGACAGTAATAGCTCCATTCACAAAATTCATTCTGTTCACTTTTATCACGAACATCCTTTACGAATAACACAGTAGCAGGAAACATTANAGCATATTTCTCCAGACATTCATATTGCGCAAAAGATTGGCGTGTGAATTACTGTATATAGTAGTGAGGGAAATAAATTTAAAATCATTTAAGTAGATATAACATCCATCAGCAATGGAAATGTGTAACCAAAATAGGCTTCTTTATGAAAGCCGAGAATTATGGTGTACAATTAAAACT]
[+] EMBL CD201963             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTCGCACACAGCGACAAAATAAAAATGATATATATTGCTGATTGTCATCTGCAGTCATTTTCGGCGCTTTACAATTCAAAAGGAGTTAATGAGCATATATTAACGCCTCCCAAGGCGAACTGATGCTCCGAACGAACTCCGAGAACTCCCAGCACTAAGTGGGTTTCCATGGTTGTCTAGAAGACCAGTTGCCGTGGCTGGTCGCGCAGGTGGTATTGAAGCGTGCAATAGGCTTCCTGTTGTTGTGGTATTGGCGGAGGATTGATCTATATCTTGATCTTCTGCTTCATGGTGCGAGTTGCTACTAGTTCCGGGAACAGAGTAACTGACTAACGCACCACTAGCTGAACCTG AACACAATTCGCTTTCCGCATGGCAATTTCCAGGAGCTCTGAATCACTCAAATTTCGGCTTGCGACTGAAA                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD188402             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTCAAAAGAAGTTAATGAGCAAATATTAGCGCCTCCCAAGGCGAACTGATGCTCCGAACGAACTCCGAGAACTCCCAGCACTAAGTGGGTTTCCATGGTTGTCTAGAAGACCAGTTGCCGTGGCTGGTCGCGCAGGTGGTATTGAAGTGTTCAATAGGCTTCCTGTTGTTGTGGTATTGGTGGAGGATTGATCTAAATCTTGATCTTCTGCTTCATGTTGCGAGTTGCTAGTAGTTCCGGGAACAGAGTAACTGACTAACGCACCACTAGCTGAACCTGAAACACAATTCGCTTTCCGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]




>consensus_9297#0
AATTTTATTTTTGGTAATTACAATTTATCGTCTGTTGGGTAAGGAAGATCTTGTACAGTC
ACAACAGTTATGATTAATAGCAGTTTTCTGCAAAAATGCTCAATACATGTTAATTTCATT
GTTGTGTAGTCTGTACCTTACGCGCTGGCACAGTTTACTCAAATAATTTATAGGAAAATC
GGATAGATTCATAACTTTAACAGAAGGCAAAACATCTACAAAAGATAACATAAGGTGTCC
AATTTGATGTATTTATCTTTATTGGAAGAAACAGTTTTCCAGGTTTGGTTTTCATTTTTG
AAAAAATTATAAGTAAGAAAAAACAATATCACATTTTGGTTCCTGATGTACTTTGTCACA
TAAAATATGCACTGGTTACTGAATATTTTTCATTCATGGATTGCACTTTACCGGGGCTTC
CGGTTTATTCGATTACCTAGAAGTATGTGTACATAAACGCAGTGAACAAAGTTGTAATGC
AGTAGGTAGGTAAGCCAATGGTTTTCTCGCACACAGCGACAAAATAAAAATGATATATAT
TGTTGATTGTCATCTGCAGTCATTTTTGGCGCTTTACAATTCAAAAGAAGTTAATGAGCA
AATATTAGCGCCTCCCAAGGCGAACTGATGCTCCGAACGAACTCCGAGAACTCCCAGCAC
TAAGTGGGTTTCCATGGTTGTCTAGAAGACCAGTTGCCGTGGCTGGTCGCGCAGGTGGTA
TTGAAGTGTTCAATAGGCTTCCTGTTGTTGTGGTATTGGTGGAGGATTGATCTAAATCTT
GATCTTCTGCTTCATGTTGCGAGTTGCTAGTAGTTCCGGGAACAGAGTAACTGACTAACG
CACCACTAGCTGAACCTGAAACACAATTCGCTTTCCGCATGGCAATTTCCAGGAGCTCTG
AATCACTCAAATTTCGGCTTGCGACTGAAAGTAATGAGAGCATTTCTTCATGAATACGTG
ATTCTGGGAATTCTACCTTTATAAGACGCTTTTCTGATGAGTAGTGAATAGCTATACAAT
CTATACTTTTCANACGATGACCACGACAGTAATAGCTCCATTCACANATTTCATTCTGTT
CACTTTTATCACGAACATCCTTTACGAATAACACAGTAGCAGGAAACATTAGAGCATATT
TCTCCAGACATTCATATTGCGCAAAAGATTGGCGTGTGAATTACTGTATATAGTAGTGAG
GGAAATAAATTTAAAATCATTTAAGTAGATATAACATCCATCAGCAATGGAAATGTGTAA
CCAAAATAGGCTTCTTTATGAAAGCCGAGAATTATGGTGTACAATTAAAACT

consensusID : consensus_9297#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 553
fasta sequence

                              [CTAAATCTTGATCTTCTGCTTCATGATGCGAGTTGCTAGTAGTTCCGGGAACAGAGTAACTGACTAACGCACCACTAGCTGAACCTGAAACACAATTCGCTTTCCGCATGGCAATTTCCAGGAGCTCTGAATCACTCAAATTTCGGCTTGCGACTGAAAGTAATGAGAGCATTTCTTCATGAATACGTGATTCTGGGAATTCTACCTTTATAAGACGCTTTTCTGATGAGTAGTGAATAGCTATACAATCTATACTTTTCAAACGATGACCACGACAGTAATAGCTCCATTCACAAATTTCATTTTGTCTCAGTTTTCTCGCTATGCCTCACTGATTCCGATCAACGCTAGTTACAGGACACTATAGAGCACTACTTGTTAAGCCTTCCAAGCGTTCGCAGTATACCATTAGTGTCGACTCGCGGACAGACTAGTAAGTCAATAGTGATTATGGACCCTCCAGCAGTCATTGTCATTAGTATCCAAACCCCACTGTTATCGCCAGACCATTGTCATATGAATCGTGTGATATGTATCGTTCAAGAAGTAGTAT]

[-] EMBL CD201933             [CTAAATCTTGATCTTCTGCTTCATGATGCGAGTTGCTAGTAGTTCCGGGAACAGAGTAACTGACTAACGCACCACTAGCTGAACCTGAAACACAATTCGCTTTCCGCATGGCAATTTCCAGGAGCTCTGAATCACTCAAATTTCGGCTTGCGACTGAAAGTAATGAGAGCATTTCTTCATGAATACGTGATTCTGGGAATTCTACCTTTATAAGACGCTTTTCTGATGAGTAGTGAATAGCTATACAATCTATACTTTTCAAACGATGACCACGACAGTAATAGCTCCATTCACAAATTTCATTTTGTCTCAGTTTTCTCGCTATGCCTCACTGATTCCGATCAACGCTAGTTACAGGACACTATAGAGCACTACTTGTTAAGCCTTCCAAGCGTTCGCAGTATACCATTAGTGTCGACTCGCGGACAGACTAGTAAGTCAATAGTGATTATGGACCCTCCAGCAGTCATTGTCATTAGTATCCAAACCCCACTGTTATCGCCAGACCATTGTCATATGAATCGTGTGATATGTATCGTTCAAGAAGTAGTAT]




>consensus_9297#1
CTAAATCTTGATCTTCTGCTTCATGATGCGAGTTGCTAGTAGTTCCGGGAACAGAGTAAC
TGACTAACGCACCACTAGCTGAACCTGAAACACAATTCGCTTTCCGCATGGCAATTTCCA
GGAGCTCTGAATCACTCAAATTTCGGCTTGCGACTGAAAGTAATGAGAGCATTTCTTCAT
GAATACGTGATTCTGGGAATTCTACCTTTATAAGACGCTTTTCTGATGAGTAGTGAATAG
CTATACAATCTATACTTTTCAAACGATGACCACGACAGTAATAGCTCCATTCACAAATTT
CATTTTGTCTCAGTTTTCTCGCTATGCCTCACTGATTCCGATCAACGCTAGTTACAGGAC
ACTATAGAGCACTACTTGTTAAGCCTTCCAAGCGTTCGCAGTATACCATTAGTGTCGACT
CGCGGACAGACTAGTAAGTCAATAGTGATTATGGACCCTCCAGCAGTCATTGTCATTAGT
ATCCAAACCCCACTGTTATCGCCAGACCATTGTCATATGAATCGTGTGATATGTATCGTT
CAAGAAGTAGTAT

consensusID : consensus_9297#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 172
fasta sequence

                              [GTTTCCTGTTTTTCGTCCTTTCTAGCCTGTTGTTAAACTTACAATGAACCGGTATAATAATGTATTTTCATACACAAGTAATTCACACGACAATCTTTTGCGCAATATTGAATGTCTGGAGAAATATGCTCTAATGTTTCCTGCTACTGTGTTATTCGTAAAGGATGTTCGT]

[+] EMBL CD193904             [GTTTCCTGTTTTTCGTCCTTTCTAGCCTGTTGTTAAACTTACAATGAACCGGTATAATAATGTATTTTCATACACAAGTAATTCACACGACAATCTTTTGCGCAATATTGAATGTCTGGAGAAATATGCTCTAATGTTTCCTGCTACTGTGTTATTCGTAAAGGATGTTCGT]




>consensus_9297#2
GTTTCCTGTTTTTCGTCCTTTCTAGCCTGTTGTTAAACTTACAATGAACCGGTATAATAA
TGTATTTTCATACACAAGTAATTCACACGACAATCTTTTGCGCAATATTGAATGTCTGGA
GAAATATGCTCTAATGTTTCCTGCTACTGTGTTATTCGTAAAGGATGTTCGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9297#0      AATTTTATTTTTGGTAATTACAATTTATCGTCTGTTGGGTAAGGAAGATCTTGTACAGTC 60
consensus_9297#1      ------------------------------------------------------------
consensus_9297#2      ------------------------------------------------------------
                                                                                  

consensus_9297#0      ACAACAGTTATGATTAATAGCAGTTTTCTGCAAAAATGCTCAATACATGTTAATTTCATT 120
consensus_9297#1      ------------------------------------------------------------
consensus_9297#2      ------------------------------------------------------------
                                                                                  

consensus_9297#0      GTTGTGTAGTCTGTACCTTACGCGCTGGCACAGTTTACTCAAATAATTTATAGGAAAATC 180
consensus_9297#1      ------------------------------------------------------------
consensus_9297#2      ------------------------------------------------------------
                                                                                  

consensus_9297#0      GGATAGATTCATAACTTTAACAGAAGGCAAAACATCTACAAAAGATAACATAAGGTGTCC 240
consensus_9297#1      ------------------------------------------------------------
consensus_9297#2      ------------------------------------------------------------
                                                                                  

consensus_9297#0      AATTTGATGTATTTATCTTTATTGGAAGAAACAGTTTTCCAGGTTTGGTTTTCATTTTTG 300
consensus_9297#1      ------------------------------------------------------------
consensus_9297#2      ------------------------------------------------------------
                                                                                  

consensus_9297#0      AAAAAATTATAAGTAAGAAAAAACAATATCACATTTTGGTTCCTGATGTACTTTGTCACA 360
consensus_9297#1      ------------------------------------------------------------
consensus_9297#2      ------------------------------------------------------------
                                                                                  

consensus_9297#0      TAAAATATGCACTGGTTACTGAATATTTTTCATTCATGGATTGCACTTTACCGGGGCTTC 420
consensus_9297#1      ------------------------------------------------------------
consensus_9297#2      ------------------------------------------------------------
                                                                                  

consensus_9297#0      CGGTTTATTCGATTACCTAGAAGTATGTGTACATAAACGCAGTGAACAAAGTTGTAATGC 480
consensus_9297#1      ------------------------------------------------------------
consensus_9297#2      ------------------------------------------------------------
                                                                                  

consensus_9297#0      AGTAGGTAGGTAAGCCAATGGTTTTCTCGCACACAGCGACAAAATAAAAATGATATATAT 540
consensus_9297#1      ------------------------------------------------------------
consensus_9297#2      ------------------------------------------------------------
                                                                                  

consensus_9297#0      TGTTGATTGTCATCTGCAGTCATTTTTGGCGCTTTACAATTCAAAAGAAGTTAATGAGCA 600
consensus_9297#1      ------------------------------------------------------------
consensus_9297#2      ------------------------------------------------------------
                                                                                  

consensus_9297#0      AATATTAGCGCCTCCCAAGGCGAACTGATGCTCCGAACGAACTCCGAGAACTCCCAGCAC 660
consensus_9297#1      ------------------------------------------------------------
consensus_9297#2      ------------------------------------------------------------
                                                                                  

consensus_9297#0      TAAGTGGGTTTCCATGGTTGTCTAGAAGACCAGTTGCCGTGGCTGGTCGCGCAGGTGGTA 720
consensus_9297#1      ------------------------------------------------------------
consensus_9297#2      ------------------------------------------------------------
                                                                                  

consensus_9297#0      TTGAAGTGTTCAATAGGCTTCCTGTTGTTGTGGTATTGGTGGAGGATTGATCTAAATCTT 780
consensus_9297#1      ---------------------------------------------------CTAAATCTT 9
consensus_9297#2      ------------------------------------------------------------
                                                                                  

consensus_9297#0      GATCTTCTGCTTCATGTTGCGAGTTGCTAGTAGTTCCGGGAACAGAGTAACTGACTAACG 840
consensus_9297#1      GATCTTCTGCTTCATGATGCGAGTTGCTAGTAGTTCCGGGAACAGAGTAACTGACTAACG 69
consensus_9297#2      ------------------------------------------------------------
                                                                                  

consensus_9297#0      CACCACTAGCTGAACCTGAAACACAATTCGCTTTCCGCATGGCAATTTCCAGGAGCTCTG 900
consensus_9297#1      CACCACTAGCTGAACCTGAAACACAATTCGCTTTCCGCATGGCAATTTCCAGGAGCTCTG 129
consensus_9297#2      ----------------------------------------------------GTTTCCTG 8
                                                                          *    ***

consensus_9297#0      AATCACTCAAATTTCGGCTTGCGACTGAAAGTAATGAGAGCATTTCTTCATGAATACGTG 960
consensus_9297#1      AATCACTCAAATTTCGGCTTGCGACTGAAAGTAATGAGAGCATTTCTTCATGAATACGTG 189
consensus_9297#2      TTTTTCGTCCTTTCTAGCCTGTTGTTAAACTTACAATGAAC----CGGTATAATAATGTA 64
                        *  *     **   ** **    * **  **    ** *    *   ** *  * ** 

consensus_9297#0      ATTCTGGGAATTCTACCTTTATAAGACGCTTTTCTGATGAGTAGTGAATAGCTATACAAT 1020
consensus_9297#1      ATTCTGGGAATTCTACCTTTATAAGACGCTTTTCTGATGAGTAGTGAATAGCTATACAAT 249
consensus_9297#2      TTTTCATACACAAGTAATTCACACGACAATCTTTTGCGCAATATTGAATGTCTGGAGAAA 124
                       **      *       ** * * ***  * ** **   * ** *****  **  * ** 

consensus_9297#0      CTATACTTTTCANACGATGACCACGACAGTAATAGCTCCATTCACANATTTCATTCTGT- 1079
consensus_9297#1      CTATACTTTTCAAACGATGACCACGACAGTAATAGCTCCATTCACAAATTTCATTTTGTC 309
consensus_9297#2      -TATGCTCT---AATGTTTCCTGCTACTGTGTTA--TTCGTAAAGGATGTTCGT------ 172
                       *** ** *    * * *  *  * ** **  **  * * *  *     *** *      

consensus_9297#0      TCACTTTTATCACGAA----CATCCTTTACGAATAACAC-AGTAGCAGGAAACATTAGAG 1134
consensus_9297#1      TCAGTTTTCTCGCTATGCCTCACTGATTCCGATCAACGCTAGTTACAGGACACTATAGAG 369
consensus_9297#2      ------------------------------------------------------------
                                                                                  

consensus_9297#0      CA-TATTTCTCCAGACATTCATAT-TGCGCAAAAGATTGGC-GTGTGAATTACTGTATAT 1191
consensus_9297#1      CACTACTTGTTAAGCCTTCCAAGCGTTCGCAGTATACCATTAGTGTCGACTCGCGGACAG 429
consensus_9297#2      ------------------------------------------------------------
                                                                                  

consensus_9297#0      AGTAGTGAGGGAAATAAATTTAAAATCATTTAAGTAGATATAACATCCATCAGCAATGGA 1251
consensus_9297#1      ACTAGTAAGTCAATAGTGATTATGGACCCTCCAGCAGTCATTGTCATTAGTATCCAAACC 489
consensus_9297#2      ------------------------------------------------------------
                                                                                  

consensus_9297#0      AATGTGTAACCAAAATAGGCTTCTT-TATGAAAGCCGAGAATTATGGTGTACAATTAAAA 1310
consensus_9297#1      CCACTGTTATCGCCAGACCATTGTCATATGAATCGTGTGATATGTATCGTTCAAGAAGTA 549
consensus_9297#2      ------------------------------------------------------------
                                                                                  

consensus_9297#0      CT-- 1312
consensus_9297#1      GTAT 553
consensus_9297#2      ----