cluster # 9300

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Schistosoma mansoni
cluster # 9300 cluster # 9300 Sequences # 9 consensus # 7

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9300#0 length = 521 sequences # 2
consensus_9300#1 length = 446 sequences # 1
consensus_9300#2 length = 382 sequences # 1

consensus_9300#3 length = 327 sequences # 2
consensus_9300#4 length = 243 sequences # 1
consensus_9300#5 length = 200 sequences # 1
consensus_9300#6 length = 139 sequences # 1

consensusID : consensus_9300#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 521
fasta sequence

                              [AGACACACGTTCCGATTCAACCTGTTCTACCACTTCACTTTCTGCGTCCGCTTCAACTTGCCCCAATGTCTCACCGAACACTTCGACTGCCGACTCGGCTTCCGTCTCACCTTCAAATACGCCTTCACCAACTTCACCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTCAGACTCCAATTCGACTGGAGCGAACACAGACCTTCTTATAGATGTCACTACTCCACCGACGACTGACGAAGTCAGGATGGCCACCAGACAAATCACAAGCGGGAAAGCAGAAGGACCTGAGAACATACCACCTGAAGCACTGAAGTCAGACATAGAAGCAACTGCAAACATGCTCCATGTTCTGTTCAGGAAGATTTGGAAGGGAGAATAAGTGCCACTGACAAACTGGAAAGAAGGACACTTCATCGAGATACAGTGACTGGGTGAAGTAAGTGCTAAAATGGACAAGATATTAGGCTTTCAAA]

[+] EMBL CD084626             [AGACACACGTTCCGATTCAACCTGTTCTACCACTTCACTTTCTGCGTCCGCTTCAACTTGCCCCAATGTCTCACCGAACACTTCGACTGCCGACTCGGCTTCCGTCTCACCTTCAAATACGCCTTCACCAACTTCACCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTCAGACTCCAATTCGACTGGAGCGAACACAGACCTTCTTATAGATGTCACTACTCCACCGACGACTGACGAAGTCAGGATGGCCACCAGACAAATCACAAGCGGGAAAGCAGAAGGACCTGAGAACATACCACCTGAAGCACTGAAGTCAGACATAGAAGCAACTGCAAACATGCTCCATGTTCTGTTCAGGAAGATTTGGAAGGGAGAATAAGTGCCACTGACAAACTGGAAAGAAGGACACTTCATCGAGATACAGTGACTGGGTGAAGTAAGTGCTAAAATGGACAAGATATTAGGCTTTCAAA]
[+] EMBL CD084628             [AGACACACGTTCCGATTCAACCTGTTCTACCACTTCACTTTCTGCGTCCGCTTCAACTTGCCCCAATGTCTCACCGAACACTTCGACTGCCGACTCGGCTTCCGTCTCACCTTCAAATACGCCTTCACCAACTTCACCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTCAGACTCCAATTCGACTGGAGCGAACACAGACCTTCTTATAGATGTCACTACTCCACCGACGACTGACGAAGTCAGGATGGCCACCAGACAAATCACAAGCGGGAAAGCAGAAGGACCTGAGAACATACCACCTGAAGCACTGAAGTCAGACATAGAAGCAACTGCAAACATGCTCCATGTTCTGTTCAGGAAGATTTGGAAGGGAGAATAAGTGCCACTGACAAACTGGAAAGAAGGACACTTCATCGAGATACAGTGACTGGGTGAAGTAAGTGCTAAAATGGACAAGATATTATGTTTTCAAA]




>consensus_9300#0
AGACACACGTTCCGATTCAACCTGTTCTACCACTTCACTTTCTGCGTCCGCTTCAACTTG
CCCCAATGTCTCACCGAACACTTCGACTGCCGACTCGGCTTCCGTCTCACCTTCAAATAC
GCCTTCACCAACTTCACCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTC
CCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTCAGACTCCAATTCGACTGGAGCGAA
CACAGACCTTCTTATAGATGTCACTACTCCACCGACGACTGACGAAGTCAGGATGGCCAC
CAGACAAATCACAAGCGGGAAAGCAGAAGGACCTGAGAACATACCACCTGAAGCACTGAA
GTCAGACATAGAAGCAACTGCAAACATGCTCCATGTTCTGTTCAGGAAGATTTGGAAGGG
AGAATAAGTGCCACTGACAAACTGGAAAGAAGGACACTTCATCGAGATACAGTGACTGGG
TGAAGTAAGTGCTAAAATGGACAAGATATTAGGCTTTCAAA

consensusID : consensus_9300#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 446
fasta sequence

                              [TTCTAGTTGTCATTTATTTTACCACCACTAATAATAATTCCCTTGTGATTGCTTTTCTCTAAAAACATTTTGATTGAAAATCATCTTTATTTTAGCTTATTCTAGCCTATTAAAAATGTCTGTGTACTGCCAGTCATACTGTGCTGTGATGTTTCTTATAACAGTGTACGAGTTGTATAGTAGCTCAGTTTTTCTGTAATGAATAACAGCCTGGCCAGTAATATTTAGTGTTTCAGAAGTACATAGGGATCCTTACTTATGCTCTTAAAAGTATTGTTTATTCACTTTTGGTCAGAGTAATAAAACGGATCTAAATTCTATTTGGTTTATGTTTCATACACCTATTAAACTAATCTACTTAATAAATGCAACTTAGGCTTTATGTTCCTGGTATTTGTACTGGCGTAAAATATAATACGATATGTAAACTCTTCAAAAAAAAAAAA]

[+] EMBL SMAA69922            [TTCTAGTTGTCATTTATTTTACCACCACTAATAATAATTCCCTTGTGATTGCTTTTCTCTAAAAACATTTTGATTGAAAATCATCTTTATTTTAGCTTATTCTAGCCTATTAAAAATGTCTGTGTACTGCCAGTCATACTGTGCTGTGATGTTTCTTATAACAGTGTACGAGTTGTATAGTAGCTCAGTTTTTCTGTAATGAATAACAGCCTGGCCAGTAATATTTAGTGTTTCAGAAGTACATAGGGATCCTTACTTATGCTCTTAAAAGTATTGTTTATTCACTTTTGGTCAGAGTAATAAAACGGATCTAAATTCTATTTGGTTTATGTTTCATACACCTATTAAACTAATCTACTTAATAAATGCAACTTAGGCTTTATGTTCCTGGTATTTGTACTGGCGTAAAATATAATACGATATGTAAACTCTTCAAAAAAAAAAAA]




>consensus_9300#1
TTCTAGTTGTCATTTATTTTACCACCACTAATAATAATTCCCTTGTGATTGCTTTTCTCT
AAAAACATTTTGATTGAAAATCATCTTTATTTTAGCTTATTCTAGCCTATTAAAAATGTC
TGTGTACTGCCAGTCATACTGTGCTGTGATGTTTCTTATAACAGTGTACGAGTTGTATAG
TAGCTCAGTTTTTCTGTAATGAATAACAGCCTGGCCAGTAATATTTAGTGTTTCAGAAGT
ACATAGGGATCCTTACTTATGCTCTTAAAAGTATTGTTTATTCACTTTTGGTCAGAGTAA
TAAAACGGATCTAAATTCTATTTGGTTTATGTTTCATACACCTATTAAACTAATCTACTT
AATAAATGCAACTTAGGCTTTATGTTCCTGGTATTTGTACTGGCGTAAAATATAATACGA
TATGTAAACTCTTCAAAAAAAAAAAA

consensusID : consensus_9300#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 382
fasta sequence

                              [TACTTGATGGGGGCCTCTCAATTCCACTAAGTGATACATTGNTATTGTCANCTTNTNTANTTTCTTTAACTATTCTAGTTGTCATTATTTTACCACCACTAATAATANTTTNGTTGTGATTGNTTTTCTCTAAAAACATTTNGATTGAAAATCATCTTNATTTTAGCTTATTCTAGCCTATTAAAAATGTCTGTGTACTGCCAGTCATACTGTGCTGTGATGTTTCTTATAACAGTGTACGAGTTGTATAGTAGCTCAGCTCTNCTGTAATGAATAACAGNCTGGNCAGTANTATTTAGTGNTTTCAGAAGTACATAGGGATCTNTACTGATGCTCTNAAAAGTATTGTTTATTCACTNNCGGGCCAGAGTAATAAAACGGA]

[+] EMBL SM927                [TACTTGATGGGGGCCTCTCAATTCCACTAAGTGATACATTGNTATTGTCANCTTNTNTANTTTCTTTAACTATTCTAGTTGTCATTATTTTACCACCACTAATAATANTTTNGTTGTGATTGNTTTTCTCTAAAAACATTTNGATTGAAAATCATCTTNATTTTAGCTTATTCTAGCCTATTAAAAATGTCTGTGTACTGCCAGTCATACTGTGCTGTGATGTTTCTTATAACAGTGTACGAGTTGTATAGTAGCTCAGCTCTNCTGTAATGAATAACAGNCTGGNCAGTANTATTTAGTGNTTTCAGAAGTACATAGGGATCTNTACTGATGCTCTNAAAAGTATTGTTTATTCACTNNCGGGCCAGAGTAATAAAACGGA]




>consensus_9300#2
TACTTGATGGGGGCCTCTCAATTCCACTAAGTGATACATTGNTATTGTCANCTTNTNTAN
TTTCTTTAACTATTCTAGTTGTCATTATTTTACCACCACTAATAATANTTTNGTTGTGAT
TGNTTTTCTCTAAAAACATTTNGATTGAAAATCATCTTNATTTTAGCTTATTCTAGCCTA
TTAAAAATGTCTGTGTACTGCCAGTCATACTGTGCTGTGATGTTTCTTATAACAGTGTAC
GAGTTGTATAGTAGCTCAGCTCTNCTGTAATGAATAACAGNCTGGNCAGTANTATTTAGT
GNTTTCAGAAGTACATAGGGATCTNTACTGATGCTCTNAAAAGTATTGTTTATTCACTNN
CGGGCCAGAGTAATAAAACGGA

consensusID : consensus_9300#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 327
fasta sequence

                              [CACCCAGTCTATGATTACTGTCCCCCTTATTCACAGCCACATTTGGTTAAATCTGTACAAATGTTGTTTTCTATTTTATTGGTACGATGTGGTCAGTTTGGTTGGTATATATAAACTCAGTATGTTTGAAATATAAAGATTCGTATCGCAGAAGCTGTTCTGGACTTAACTGGCTGGGCTAGACAGAAACAGGATCGACAAGTACTCTAGACTGCTCACACGGTTTCCGTATGTCACTGTTCCAATCGATAATTCGATGCTCTCTGATTGGCGGTCTTATCAGGTGACACATCAACTGGACATCCACTCGGCCACAAGATATAACAT]

[+] EMBL CD166691             [CACCCAGTCTATGATTACTGTCCCCCTTATTCACAGCCACATTTGGTTAAATCTGTACAAATGTTGTTTTCTATTTTATTGGTACGATGTGGTCAGTTTGGTTGGTATATATAAACTCAGTATGTTTGAAATATAAAGATTCGTATCGCAGAAGCTGTTCTGGACTTAACTGGCTGGGCTAGACAGAAACAGGATCGACAAGTACTCTAGACTGCTCACACGGTTTCCGTATGTCACTGTTCCAATCGATAATTCGATGCTCTCTGATTGGCGGTCTTATCAGGTGACACATCAACTGGACATCCACTCGGCCACAAGATATAACAT]
[+] EMBL CD064264             [                                                                                 GTACGATGTGGTCAGTTTGATTGGTATATATAAACTCAGTATGTTTGAAATATACAGATTCGTATCGCAGAAGCTGTTCTGGACTTAACTGGCTGGGCTAGACAGAAACAGGATCGACAAGTACTCTAGACTGCTCACACGGTTTCCGTATGTCACTGTTCCAATCGATAATTCGATGCTCTCTGATTGGCGGTCTTATCAGGTGACACATCAACTGGACATCCACTCGGCCACAAGATATAACAT]




>consensus_9300#3
CACCCAGTCTATGATTACTGTCCCCCTTATTCACAGCCACATTTGGTTAAATCTGTACAA
ATGTTGTTTTCTATTTTATTGGTACGATGTGGTCAGTTTGGTTGGTATATATAAACTCAG
TATGTTTGAAATATAAAGATTCGTATCGCAGAAGCTGTTCTGGACTTAACTGGCTGGGCT
AGACAGAAACAGGATCGACAAGTACTCTAGACTGCTCACACGGTTTCCGTATGTCACTGT
TCCAATCGATAATTCGATGCTCTCTGATTGGCGGTCTTATCAGGTGACACATCAACTGGA
CATCCACTCGGCCACAAGATATAACAT

consensusID : consensus_9300#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 243
fasta sequence

                              [GTTGGATGACTTCCAAACCCGAATCTATTTTGCGCAATTAAGCAATTCTGACTCAGGGAACAACCCGACCTGAGCCCATGCTGCGTAAAGTATTGGAGCGGCATGACCTTTGGATAATACAAATCTATCACTTGAAGGATTTCTAGGTGATTCTGGTTTGTAGCGCATTTCCTTCAGGAAAAGTACAGACATAATTTCAGCCAGAGATGCACATGAAGTAGGATGTCTGAAGTACAATGACTG]

[+] EMBL CD065804             [GTTGGATGACTTCCAAACCCGAATCTATTTTGCGCAATTAAGCAATTCTGACTCAGGGAACAACCCGACCTGAGCCCATGCTGCGTAAAGTATTGGAGCGGCATGACCTTTGGATAATACAAATCTATCACTTGAAGGATTTCTAGGTGATTCTGGTTTGTAGCGCATTTCCTTCAGGAAAAGTACAGACATAATTTCAGCCAGAGATGCACATGAAGTAGGATGTCTGAAGTACAATGACTG]




>consensus_9300#4
GTTGGATGACTTCCAAACCCGAATCTATTTTGCGCAATTAAGCAATTCTGACTCAGGGAA
CAACCCGACCTGAGCCCATGCTGCGTAAAGTATTGGAGCGGCATGACCTTTGGATAATAC
AAATCTATCACTTGAAGGATTTCTAGGTGATTCTGGTTTGTAGCGCATTTCCTTCAGGAA
AAGTACAGACATAATTTCAGCCAGAGATGCACATGAAGTAGGATGTCTGAAGTACAATGA
CTG

consensusID : consensus_9300#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 200
fasta sequence

                              [CCCGNGCCGCGCATGGTCGGTCCGCGGGCAATTCGATTAATTCTGCCACCCACAGCAATTCTGCCACCCACAGCAATTCTGCCACCCACAGTAATTCTGCCACCCACAGTAATTCTGCCACCCACAGCAATTCTGCCACACAGTAATTCTGCCACCCACAGCAATTCCAGTAATTCTGCCACCCACAGCCCCCCGGCTCC]

[+] EMBL CD087607             [CCCGNGCCGCGCATGGTCGGTCCGCGGGCAATTCGATTAATTCTGCCACCCACAGCAATTCTGCCACCCACAGCAATTCTGCCACCCACAGTAATTCTGCCACCCACAGTAATTCTGCCACCCACAGCAATTCTGCCACACAGTAATTCTGCCACCCACAGCAATTCCAGTAATTCTGCCACCCACAGCCCCCCGGCTCC]




>consensus_9300#5
CCCGNGCCGCGCATGGTCGGTCCGCGGGCAATTCGATTAATTCTGCCACCCACAGCAATT
CTGCCACCCACAGCAATTCTGCCACCCACAGTAATTCTGCCACCCACAGTAATTCTGCCA
CCCACAGCAATTCTGCCACACAGTAATTCTGCCACCCACAGCAATTCCAGTAATTCTGCC
ACCCACAGCCCCCCGGCTCC

consensusID : consensus_9300#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 139
fasta sequence

                              [TACTGTGGGTGGCAGAATTGCTGTGGGTGGCAGAATTACTGTGGGTGGCAGAATTGCTGTGGGTGGCAGAATTACTGTGGGTGGCAGAATTGCTGTGGGTGGCAGAATTACTGTGGGTGGCAGAATTACTGCGGGCTGT]

[+] EMBL CD087602             [TACTGTGGGTGGCAGAATTGCTGTGGGTGGCAGAATTACTGTGGGTGGCAGAATTGCTGTGGGTGGCAGAATTACTGTGGGTGGCAGAATTGCTGTGGGTGGCAGAATTACTGTGGGTGGCAGAATTACTGCGGGCTGT]




>consensus_9300#6
TACTGTGGGTGGCAGAATTGCTGTGGGTGGCAGAATTACTGTGGGTGGCAGAATTGCTGT
GGGTGGCAGAATTACTGTGGGTGGCAGAATTGCTGTGGGTGGCAGAATTACTGTGGGTGG
CAGAATTACTGCGGGCTGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9300#1      ------------------------------------------------------------
consensus_9300#2      --TACTTGATGGGGGCCTCTCAATTCCACTAAGTGATACATTGNTATTGTCANCTTNTNT 58
consensus_9300#6      ------------------------------------------------------------
consensus_9300#4      ------------------------------------------------------------
consensus_9300#5      ------------------------------------------------------------
consensus_9300#0      AGACACACGTTCCGATTCAACCTGTTCTACCACTTCACTTTCTGCGTCCGCTTCAACTTG 60
consensus_9300#3      ------------------------------------------------------------
                                                                                  

consensus_9300#1      --------------TTCTAGTTGTCATTTATTTTACCACCACTAATAATAATTCCCTTGT 46
consensus_9300#2      ANTTTCTTTAACTATTCTAGTTGTCATT-ATTTTACCACCACTAATAATANTTTNGTTGT 117
consensus_9300#6      ------------------------------------------------------------
consensus_9300#4      ------------------------------------------------------------
consensus_9300#5      ------------------------------------------------------------
consensus_9300#0      CCCCAATGTCTCACCGAACACTTCGACTGCCGACTCGGCTTCCGTCTCACCTTCAAATAC 120
consensus_9300#3      ------------------------------------CACCCAGTCTATGATTACTGTCCC 24
                                                                                  

consensus_9300#1      GATTGCTTTTCTCTAAAAACATTTTGATTGAAAATCATCTTTATTTTAGCTTATTCTAGC 106
consensus_9300#2      GATTGNTTTTCTCTAAAAACATTTNGATTGAAAATCATCTTNATTTTAGCTTATTCTAGC 177
consensus_9300#6      ------------------------------------------------------------
consensus_9300#4      --------------------------GTTGGATGACTTCCAAACCCGAATCTATTTTGCG 34
consensus_9300#5      --------------------------------CCCGNGCCGCGCATGGTCGGTCCGCGGG 28
consensus_9300#0      GCCTTCACCAACTTCACCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTC 180
consensus_9300#3      CCTTATTCACAGCCACATTTGGTTAAATCTGTACAAATGTTGTTTTCTATTTTATTGGTA 84
                                                                                  

consensus_9300#1      CTATT-AAAAATGTCTGT-GTACTGCC-AGTCATACTGTGCT-GTGATGTTTCTTATAAC 162
consensus_9300#2      CTATT-AAAAATGTCTGT-GTACTGCC-AGTCATACTGTGCT-GTGATGTTTCTTATAAC 233
consensus_9300#6      ------------TACTGT-GGGTGGCAGAATTGCTGTGGGTG-GCAGAATTACTGTGGGT 46
consensus_9300#4      CAATT-AAGCAATTCTGA-CTCAGGGAACAACCCGACCTGAG-CCCATGCTGCGTAAAGT 91
consensus_9300#5      CAATTCGATTAATTCTGC-CACCCACAGCAATTCTGCCACCC-ACAGCAATTCTGCCACC 86
consensus_9300#0      CCGTTCCGGTTGTGCTGC-AGTCTCTGCAAGCGCCTCAGACT-CCAATTCGACTGGAGCG 238
consensus_9300#3      CGATGTGGTCAGTTTGGTTGGTATATATAAACTCAGTATGTTTGAAATATAAAGATTCGT 144
                                      *                                           

consensus_9300#1      AGTGTACGAGTTGTATAGTAGCTCAGTTTTTCTGTAATGAATAAC--AGCC-TGGCCAGT 219
consensus_9300#2      AGTGTACGAGTTGTATAGTAGCTCAGCTCTNCTGTAATGAATAAC--AGNC-TGGNCAGT 290
consensus_9300#6      GGCAGAATTGCTGTG-GGTGGCAGAATTACTGTGGGTGGCAGAAT--TGCTGTGGGTGGC 103
consensus_9300#4      ATTGGAGCGGCATGACCTTTGGATAATACAAATCTATCACTTGAA--GGAT-TTCTAGGT 148
consensus_9300#5      --CACAGTAATTCTGCCACC-CACAGTAATTCTGCCACCCACAGC--AATTCTGCCACAC 141
consensus_9300#0      AACACAGACCTTCTTATAGATGTCACTACTCCACCGACGACTGACGAAGTCAGGATGGCC 298
consensus_9300#3      ATCGCAGAAGCTGTTCTGGACTTAACTGGCTGGGCTAGACAGAAACAGGAT-CGACAAGT 203
                           *                  *                                   

consensus_9300#1      AATATT--TAGTGTTT-CAG-AAGTACATAGGGATCCTTACTTAT--GCTCTTAAAAGTA 273
consensus_9300#2      ANTATT--TAGTGNTTTCAG-AAGTACATAGGGATCTNTACTGAT--GCTCTNAAAAGTA 345
consensus_9300#6      AGAATTACTGTGGGTGGCAG-AATTACTGCGGGCTGT----------------------- 139
consensus_9300#4      GATTCT--GGTTTGTAGCGC-ATTTCCTTCAGGAAAAGTACAGAC--ATAATTTCAGCCA 203
consensus_9300#5      AGTAATTCTGCCACCCACAGCAATTCCAGTAATTCTGCCACCCAC--AGCCCCCCGGCTC 199
consensus_9300#0      ACCAGACAAATCACAAGCGG-GAAAGCAGAAGGACCTGAGAACAT--ACCACCTGAAGCA 355
consensus_9300#3      ACTCTA--GACTGCTCACACGGTTTCCGTATGTCACTGTTCCAATCGATAATTCGATGCT 261
                                       *        *                                 

consensus_9300#1      TTGTT-TATTCACTTTTGG-TCAGAGTAATAAAACGGATCTAAATTCTATTTGGTTTATG 331
consensus_9300#2      TTGTT-TATTCACTNNCGGGCCAGAGTAATAAAACGGA---------------------- 382
consensus_9300#6      ------------------------------------------------------------
consensus_9300#4      GAGATGCACATGAAGTAGGATGTCTGAAGTACAATGACTG-------------------- 243
consensus_9300#5      C----------------------------------------------------------- 200
consensus_9300#0      CTGAAGTCAGACATAGAAGCAACTGCAAACATGCTCCATGTTCTGTTCAGGAAGATTTGG 415
consensus_9300#3      CTCTGATTGGCGGTCTTATCAGGTGACACATCAACTGGACATCCACTCGGCCACAAGATA 321
                                                                                  

consensus_9300#1      TTTCATACACCTATTAAACTAATCTACTTAATAAATGCAACTTAGGCTTTATGTTCCTGG 391
consensus_9300#2      ------------------------------------------------------------
consensus_9300#6      ------------------------------------------------------------
consensus_9300#4      ------------------------------------------------------------
consensus_9300#5      ------------------------------------------------------------
consensus_9300#0      AAGGGAGAATAAGTGCCACTGACAAACTGGAAAGAAGGACACTTCATCGAGATACAGTGA 475
consensus_9300#3      TAACAT------------------------------------------------------ 327
                                                                                  

consensus_9300#1      TATTTGTACTGGCGTAAAATATAATACGATATGTAAACTCTTCAAAAAAAAAAAA 446
consensus_9300#2      -------------------------------------------------------
consensus_9300#6      -------------------------------------------------------
consensus_9300#4      -------------------------------------------------------
consensus_9300#5      -------------------------------------------------------
consensus_9300#0      CTGGGTGAAGTAAGTGCTAAAATGGACAAGATATTAGGCTTTCAAA--------- 521
consensus_9300#3      -------------------------------------------------------