cluster # 9303

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Schistosoma mansoni
cluster # 9303 cluster # 9303 Sequences # 9 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9303#0 length = 1324 sequences # 5
consensus_9303#1 length = 645 sequences # 2

consensus_9303#2 length = 580 sequences # 1
consensus_9303#3 length = 519 sequences # 1

consensusID : consensus_9303#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1324
fasta sequence

                              [CGTCTACAATGATTAGTAGACTTGACTAGTTAAAATAAGAAAAATTAAATTTTCCATCCTTCATCTCTGATAATGGAAAATTATTGCGTAATGAGAATTTACTGTTAACATCGCATTTATTTGGCCACTAAAATTTATGAACTATTCTTCAAAAAATTGTTCGTCCGGTCAGCGATCAAATTCCCATTTCTCTGTTGTCATCTTTGTAAGCCCAAATAAATGAGGATTGAGCTCTGTGACGGNNCGTGATCTTTATAGCTGTTGTCCT-CGGAAGGATCATAATCTATAGTTACTAAACAAATGATATAACTCAAAGTTCGATTGCTAAGAGATGTTTCCCGTGTTTCATTCCTTTCACCCCTCCCAAAAGATCATTGATGACCTTTCTCTGTTGTTCCGTCTTCCTTGTGGCTGTAACTTGATCTACCGATTTCCGGATAAAAGTAGTCTCATAAGTTGTCTAACTTCTTACCCAGTAATTGTAAATATAAATCAGGATCCCAGATTGCTGTCGTCACTCGAGTCAGTCCCTGCA-GGATTGAAGTTAGACACAGCAGAAACATATCCTTATCGTTTTGGTTCATCATGACAGTACTTTGGATGTTAGTTTGCTGTTCAGTCGGTTTTATTGCAGAGTCGTACTTTGTCCAGTTAACATTGTTTTTCTCTGCCGTTATTTTCATTTATATGCATTTACGTAATACCGTTACTGAAGAATCTCTTCTACTCATATCTGGATA-TGGTTTACAAACATCAAGTCGTTACTTTACTGGTCGACGATCGTATTCTTCATTTATTCCAGTAGAACGGATTAAAGGATTTCATTTAATTGATTCCATCAGTCCATTTACTATTTGTACTTATTTAAGTTGTGAATTCGCCAAGGTCACTTCTTCTTCCACTACTACTACTTCTCCTACTACAGCTGATCCACAGAAAACTGAATCATTATTCAATAAAGCTTCAACGACATTACAGACAGATTACGATCTTTTACCATTAATGCCAATCACTATGGACAATAAACAAATTCGATTTAAAGGTTGTGATCGTATTCCATTGCCTTATCTTGTATGGATGTTACGTTTGGCAAATACAGTTTTATTTCACTAAATTTTGATATGTCGCTAACATCATCTTTTTATTTTGTTATTTTAAAAAAATTATGTATTCACTTAGTTACTGTTTACTATTCAATCGTTTTTTAAATAACCCTTAGTTATTTTACAGATTAAGCTTATGTATTATGGCACAAAATGCCTAGAAGTACA-TTTTTTTCTCCATGAATTCATTTTGCTAAATAAAAATGTGACTATTTTAAGAA]

[+] EMBL SMAA8330             [CGTCTACAATGATTAGTAGACTTGACTAGTTAAAATAAGAAAAATTAAATTTTCCATCCTTCATCTCTGATAATGGAAAATTATTGCGTAATGAGAATTTACTGTTAACATCGCATTTATTTGGCCACTAAAATTTATGAACTATTCTTCAAAAAATTGTTCGTCCGGTCAGCGATCAAATTCCCATTTCTCTGTTGTCATCTTTGTAAGCCCAAATAAATGAGGATTGAGCTCTGTGACGGNNCGTGATCTTTATAGCTGTTGTCCTCCGNAGGGATCATAATCTATAGTTACTAAACAAATGATATAACTCAAAGTTCGATTGCTAAGAGATGTTTCCCGTGTTTCATTCCTTTCACCCCTCCCAAAAGATCATTGATGACCTTTCTCTGTTGTTCCGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD152282             [                                                                                                                                                                                                                                           GTGACGAAACGTGATCTTTATAGCTGTTGTCCT CGGAAGGATCATAATCTATAGTTACTAAAC AATGATATAACTCAAAGTTCGATTGCTAAGAGATGTTTCCCGTGTTTCATTCCTTTCACCCCTCCCAAAAGATCATTGATGACCTTTCTCTGTTGTTCCGTCTTCCTTGTGGCTGTAACTTGATCTACCGATTTCCGGATAAAAGTAGTCTCATAAGTTGTCTAACTTCTTACCCAGTAATTGTAAATATAAATCAGGATCCCAGATTGCTGTCGTCACTCGAGTCAGTCCCTGCA GGATTGAAGTTAGACACAGCAGAAACATATCCTTATCGTTTTGGTTCATCATGACAGTACTTTGGATGTTAGTTTGCTGTTCAGTCGGTTTTATTGCAGAGTCGTACTTTGTCCAGTTAACATTGTTTTTCTCTGCCGTTATTTTCATTTATATGCATTTACGTAATACCGTTACTGAAGAATCTCTTCTACTCATATCTGGATATTGGGTTACAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD081129             [                                                                                                                                                                                                                                                                              GGAAGGATCATAATCTATAGTTACTAAACAAATGATATAACTCAAAGTTCGATTGCTAAGAGATGTTTCCCGTGTTTCATTCCTTTCACCCCTCCCAAAAGATCATTGATGACCTTTCTCTGTTGTTCCGTCTTCCTTGTGGCTGTAACTTGATCTACCGATTTCCGGATAAAAGTAGTCTCATAAGTTGTCTAACTTCTTACCCAGTAATTGTAAATATAAATCAGGATCCCAGATTGCTGTCGTCACTCGAGTCAGTCCCTGCATGGATTGAAGTTAGACACAGCAGAAACATATCCTTATCGTTTTGGTTCATCATGACAGTACTTTGGATGTTAGTTTGTTGTTCAGTCGGTTTTATTGCAGAGTCGTACTTTGTCCAGTTAACATTGTTTTTCTCTGCCGTTATTTTCATTTATATGCATTTACGTAATACCGTTACTGAAGAATCTCTTCTACTCATATCTGGATA TGGTTTACAAACATCAAGTCGTTACTTTACTGGTCGACGATCGTATTCTTCATTTATTCCAGTAGAACGGATTAAAGGATTTCATTTAATTGATTCCATCAGTCCATTTACTATTTGTACTTATTTAAGTTGTGAATTCGCCAAGGTCACTTCTTCTTCCACTACTACTACTTCTCCTACTACAGCTGATCCACAGAAAACTGAATCATTATTCAATAAAGCTTCAACGACATTACAGACAGATTACGATCTTTTACCATT ATGCCAtc                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD074952             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATATGCATTTACGTAATACCGTTACTGAAGAATCTCTTCTACTCATATCTGGATA TGGTTTACAAACATCAAGTCGTTACTTTACTGGTCGACGATCGTATTCTTCATTTATTCCAGTAGAACGGATTAAAGGATTTCATTTAATTGATTCCATCAGTCCATTTACTATTTGTACTTATTTAAGTTGTGAATTCGCCAAGGTCACTTCTTCTTCCACTACTACTACTTCTCCTACTACAGCTGATCCACAGAAAACTGAATCATTATTCAATAAAGCTTCAACGACATTACAGACAGATTACGATCTTTTACCATTAATGCCAATCACTATGGACAATAAACAAATTCGATTTAAAGGTTGTGATCGTATTCCATTGCCTTATCTTGTATGGATGTTACGTTTGGCAAATACAGTTTTATTTCACTAAATTTTGATATGTCGCTAACATCATCTTTTTATTTTGTTATTTTAAAAAAATTATGTATTCACTTAGTTACTGTTTACTATTCAATCGTTTTTTAAATAACCCTTAGTTATTTTACAGATTAAGCTTATGTATTATGGCACAAAATGCCTAGAAGTACA TTTTTTTCTCCATGAATTCATTTTGCTAAATAAAAATGTGACTATTTTAAGAA]
[-] EMBL CD075907             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TATCTGGATA TGGTTTACAAACATCAAGTCGTTACTTTACTGGTCGACGATCGTATTCTTCATTTATTCCAGTAGAACGGATTAAAGGATTTCATTTAATTGATTCCATCAGTCCATTTACTATTTGTACTTATTTAAGTTGTGAATTCGCCAAGGTCACTTCTTCTTCCACTACTACTACTTCTCCTACTACAGCTGATCCACAGAAAACTGAATCATTATTCAATAAAGCTTCAACGACATTACAGACAGATTACGATCTTTTACCATTAATGCCAATCACTATGGACAATAAACAAATTCGATTTAAAGGTTGTGATCGTATTCCATTGCCTTATCTTGTATGGATGTTACGTTTGGCAAATACAGTTTTATTTCACTAAATTTTGATATGTCGCTAACATCATCTTTTTATTTTGTTATTTTAAAAAAATTATGTATTCACTTAGTTACTGTTTACTATTCAATCGTTTTTTAAATAACCCTTAGTTATTTTACAGATTAAGCTTATGTATTATGGCACAAAATGCCTAGAAGTACATTTTTTTTTTCCATGAATTCATTTTGCTAAAT AAAATGTGACTATTT      ]




>consensus_9303#0
CGTCTACAATGATTAGTAGACTTGACTAGTTAAAATAAGAAAAATTAAATTTTCCATCCT
TCATCTCTGATAATGGAAAATTATTGCGTAATGAGAATTTACTGTTAACATCGCATTTAT
TTGGCCACTAAAATTTATGAACTATTCTTCAAAAAATTGTTCGTCCGGTCAGCGATCAAA
TTCCCATTTCTCTGTTGTCATCTTTGTAAGCCCAAATAAATGAGGATTGAGCTCTGTGAC
GGNNCGTGATCTTTATAGCTGTTGTCCTCGGAAGGATCATAATCTATAGTTACTAAACAA
ATGATATAACTCAAAGTTCGATTGCTAAGAGATGTTTCCCGTGTTTCATTCCTTTCACCC
CTCCCAAAAGATCATTGATGACCTTTCTCTGTTGTTCCGTCTTCCTTGTGGCTGTAACTT
GATCTACCGATTTCCGGATAAAAGTAGTCTCATAAGTTGTCTAACTTCTTACCCAGTAAT
TGTAAATATAAATCAGGATCCCAGATTGCTGTCGTCACTCGAGTCAGTCCCTGCAGGATT
GAAGTTAGACACAGCAGAAACATATCCTTATCGTTTTGGTTCATCATGACAGTACTTTGG
ATGTTAGTTTGCTGTTCAGTCGGTTTTATTGCAGAGTCGTACTTTGTCCAGTTAACATTG
TTTTTCTCTGCCGTTATTTTCATTTATATGCATTTACGTAATACCGTTACTGAAGAATCT
CTTCTACTCATATCTGGATATGGTTTACAAACATCAAGTCGTTACTTTACTGGTCGACGA
TCGTATTCTTCATTTATTCCAGTAGAACGGATTAAAGGATTTCATTTAATTGATTCCATC
AGTCCATTTACTATTTGTACTTATTTAAGTTGTGAATTCGCCAAGGTCACTTCTTCTTCC
ACTACTACTACTTCTCCTACTACAGCTGATCCACAGAAAACTGAATCATTATTCAATAAA
GCTTCAACGACATTACAGACAGATTACGATCTTTTACCATTAATGCCAATCACTATGGAC
AATAAACAAATTCGATTTAAAGGTTGTGATCGTATTCCATTGCCTTATCTTGTATGGATG
TTACGTTTGGCAAATACAGTTTTATTTCACTAAATTTTGATATGTCGCTAACATCATCTT
TTTATTTTGTTATTTTAAAAAAATTATGTATTCACTTAGTTACTGTTTACTATTCAATCG
TTTTTTAAATAACCCTTAGTTATTTTACAGATTAAGCTTATGTATTATGGCACAAAATGC
CTAGAAGTACATTTTTTTCTCCATGAATTCATTTTGCTAAATAAAAATGTGACTATTTTA
AGAA

consensusID : consensus_9303#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 645
fasta sequence

                              [ATCACTGGTACGAGGCATTATTTGGCCACTAAAATTTATGAACTATTTTTCAAAAAATTGTTCGTCCGGTCAGCGATCAAATTCCCATTTCTCTGTTGTCATCTTTGTAAGCCCAAATAAATGAGGATTGAGCTCTGTGACGAAACGTGATCTTTATAGCTGTTGTCCTCGGAAGGATCATAATCTATAGTTACTAAACAAATGATATAACTCAAAGTTCGATTGCTAAGAGATGTTTCCCGTGTTTCATTCCTTTCACCCCTCCCAAAAGATCATTGATGACCTTTCTCTGTTGTTCCGTCTTCCTTGTGGCTGTAACTTGATCTACCGATTTCCGGATAAAAGTAGTCTCATAAGTTGTCTAACTTCTTACCCAGTAATTGTAAATATAAATCAGGATCCCAGATTGCTGTCGTCACTCGAGTCAGTCCCTGCATGGATTGAAGTTAGACACAGCAGAAACATATCCTTATCGTTTTGGTTCATCATGACAGTACTTTGGATGTTAGTTTGTTGTTCAGTCGGTTTTATTGCAGAGTCGTACTTTGTCCAGTTAACATTGTTTTTCTCTGCCGTTATTTTCATTTATATGCATTTACGTAATACCGTTACTGAAGGGGCTTGGCGAATGTGCTTGTGAGAGCC]

[+] EMBL CD082305             [ATCACTGGTACGAGGCATTATTTGGCCACTAAAATTTATGAACTATTTTTCAAAAAATTGTTCGTCCGGTCAGCGATCAAATTCCCATTTCTCTGTTGTCATCTTTGTAAGCCCAAATAAATGAGGATTGAGCTCTGTGACGAAACGTGATCTTTATAGCTGTTGTCCTCGGAAGGATCATAATCTATAGTTACTAAACAAATGATATAACTCAAAGTTCGATTGCTAAGAGATGTTTCCCGTGTTTCATTCCTTTCACCCCTCCCAAAAGATCATTGATGACCTTTCTCTGTTGTTCCGTCTTCCTTGTGGCTGTAACTTGATCTACCGATTTCCGGATAAAAGTAGTCTCATAAGTTGTCTAACTTCTTACCCAGTAATTGTAAATATAAATCAGGATCCCAGATTGCTGTCGTCACTCGAGTCAGTCCCTGCATGGATTGAAGTTAGACACAGCAGAAACATATCCTTATCGTTTTGGTTCATCATGACAGTACTTTGGATGTTAGTTTGTTGTTCAGTCGGTTTTATTGCAGAGTCGTACTTTGTCCAGTTAACATTGTTTTTCTCTGCCGTTATTTTCATTTATATGCATTTACGTAATACCGTTACTGAAGGGGCTTGGCGAATGTGCTTGTGAGAGCC]
[+] EMBL CD152205             [                                                                                                                                        GTGACGAAACGTGATCTTTATAGCTGTTGTCCTCGGAAGGATCATAATCTATAGTTACTAAACAAATGATATAACTCAAAGTTCGATTGCTAAGAGATGTTTCCCGTGTTTCATTCCTTTCACCCCTCCCAAAAGATCATTGATGACCTTTCTCTGTTGTTCCGTCTTCCTTGTGGCTGTAACTTGATCTACTGATTTCCGGATAAAAGTAGTCTCATAAGTTGTCTAACTTCTTACCCAGTAATTGTAAATATAAATCAGGATCCCAGATTGCTGTCGTCACTCGAGTCAGTCCCTGCATGGATTGAAGTTAGACACAGCAGAAACATATCCTTATCGTTTTGGTTCATCATGACAGTACTTTGGATGTTAGTTTGTTGTTCAGTCGGTTTTATTGCAGAGTCGTACTTTGTCCAGTCTACATTGTTTTTCTCTGCCGTTATTT                                                                ]




>consensus_9303#1
ATCACTGGTACGAGGCATTATTTGGCCACTAAAATTTATGAACTATTTTTCAAAAAATTG
TTCGTCCGGTCAGCGATCAAATTCCCATTTCTCTGTTGTCATCTTTGTAAGCCCAAATAA
ATGAGGATTGAGCTCTGTGACGAAACGTGATCTTTATAGCTGTTGTCCTCGGAAGGATCA
TAATCTATAGTTACTAAACAAATGATATAACTCAAAGTTCGATTGCTAAGAGATGTTTCC
CGTGTTTCATTCCTTTCACCCCTCCCAAAAGATCATTGATGACCTTTCTCTGTTGTTCCG
TCTTCCTTGTGGCTGTAACTTGATCTACCGATTTCCGGATAAAAGTAGTCTCATAAGTTG
TCTAACTTCTTACCCAGTAATTGTAAATATAAATCAGGATCCCAGATTGCTGTCGTCACT
CGAGTCAGTCCCTGCATGGATTGAAGTTAGACACAGCAGAAACATATCCTTATCGTTTTG
GTTCATCATGACAGTACTTTGGATGTTAGTTTGTTGTTCAGTCGGTTTTATTGCAGAGTC
GTACTTTGTCCAGTTAACATTGTTTTTCTCTGCCGTTATTTTCATTTATATGCATTTACG
TAATACCGTTACTGAAGGGGCTTGGCGAATGTGCTTGTGAGAGCC

consensusID : consensus_9303#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 580
fasta sequence

                              [CATTTGTATGTTAAGCGTTAATGGGATTACGTAAAAGATAAAAAGTTTATTTGATGACAACTATAACAGAAAGACTTACCACGCTTTTCTTCAGTACACATAAGTTCAATCTAGAACGTTCGATAGTGATTACCTCTGTCTAACGATAAAATTGATGTTGGTTGTTTGTTAATTATTTTGAATACGTGACTAATATCGACTATTTGTCCACTTTACCTATCAGGGGCTTGGCGAATGTGCTTGTGAAGAGCCTACTGCTTTTCAGACAAAGGTTTATAAAAATGTGTTCAGAAAACCTAGTAGGAGCACTTCTTTCTATCACTCCCATATACTTACCACAGTAAGTACATGTAAGCTTGTAAATCCAATTGTAAATGACGCTAGAAGATCACTACATATTATTCTACTGGTTGATTTTTCTTTCCTATTTTTGCAGAATCTCTTCTACTCATATCTGGATATGGTTTACAAACATCAAGTCGTTACTTTACTGGTCGACGATCGTATTCTTCATTTATTCCAGTAGAACGGATTAAAGGATTCCATTTAATTGATTCCATCAGTCCATTTACTATTTGTA]

[+] EMBL CD114267             [CATTTGTATGTTAAGCGTTAATGGGATTACGTAAAAGATAAAAAGTTTATTTGATGACAACTATAACAGAAAGACTTACCACGCTTTTCTTCAGTACACATAAGTTCAATCTAGAACGTTCGATAGTGATTACCTCTGTCTAACGATAAAATTGATGTTGGTTGTTTGTTAATTATTTTGAATACGTGACTAATATCGACTATTTGTCCACTTTACCTATCAGGGGCTTGGCGAATGTGCTTGTGAAGAGCCTACTGCTTTTCAGACAAAGGTTTATAAAAATGTGTTCAGAAAACCTAGTAGGAGCACTTCTTTCTATCACTCCCATATACTTACCACAGTAAGTACATGTAAGCTTGTAAATCCAATTGTAAATGACGCTAGAAGATCACTACATATTATTCTACTGGTTGATTTTTCTTTCCTATTTTTGCAGAATCTCTTCTACTCATATCTGGATATGGTTTACAAACATCAAGTCGTTACTTTACTGGTCGACGATCGTATTCTTCATTTATTCCAGTAGAACGGATTAAAGGATTCCATTTAATTGATTCCATCAGTCCATTTACTATTTGTA]




>consensus_9303#2
CATTTGTATGTTAAGCGTTAATGGGATTACGTAAAAGATAAAAAGTTTATTTGATGACAA
CTATAACAGAAAGACTTACCACGCTTTTCTTCAGTACACATAAGTTCAATCTAGAACGTT
CGATAGTGATTACCTCTGTCTAACGATAAAATTGATGTTGGTTGTTTGTTAATTATTTTG
AATACGTGACTAATATCGACTATTTGTCCACTTTACCTATCAGGGGCTTGGCGAATGTGC
TTGTGAAGAGCCTACTGCTTTTCAGACAAAGGTTTATAAAAATGTGTTCAGAAAACCTAG
TAGGAGCACTTCTTTCTATCACTCCCATATACTTACCACAGTAAGTACATGTAAGCTTGT
AAATCCAATTGTAAATGACGCTAGAAGATCACTACATATTATTCTACTGGTTGATTTTTC
TTTCCTATTTTTGCAGAATCTCTTCTACTCATATCTGGATATGGTTTACAAACATCAAGT
CGTTACTTTACTGGTCGACGATCGTATTCTTCATTTATTCCAGTAGAACGGATTAAAGGA
TTCCATTTAATTGATTCCATCAGTCCATTTACTATTTGTA

consensusID : consensus_9303#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 519
fasta sequence

                              [AGTCTCATAAGTTGTCTAACTTCTTACCCAGTAATTGTAAATATAAATCAGGATCCCAGATTGCTGTCGTCACTCGAGTCAGTCCCTGCATGGATTGAAGTTAGACACAGCAGAAACATATCCTTATCGTTTTGGTTCATCATGACAGTACGTTTGGATGTTAGTGTTGTTGTTCTAGTCGGTTTTATTGNNCAGAGTTCGTACTTTGTCCCAGTGTAACAATTGTTGTTTCTGCTGCCGTTAATTGTTCATTGTATATGGCATGTTACGTATATACCGTGTGATCTGTAGGAATCTTCTTCGTACTTCATATTCTGGATANNTTGGTTTACCCAAACTATGCAAGTTCTGTTACTTTGATCTGTGTCTGACGAGTCTGTATTCGTTCAGTTTAGTTCCATGTATGAACGGATATAAANNGGATTTTCAGTTTAAGTTGATGTCCATCTAGTCCAGTTTACTATGTTGTATCTTATTTAATGTTGTGAATTCTGCCAAGGTCACTTCTTCTTCCACTAC]

[-] EMBL CD152305             [AGTCTCATAAGTTGTCTAACTTCTTACCCAGTAATTGTAAATATAAATCAGGATCCCAGATTGCTGTCGTCACTCGAGTCAGTCCCTGCATGGATTGAAGTTAGACACAGCAGAAACATATCCTTATCGTTTTGGTTCATCATGACAGTACGTTTGGATGTTAGTGTTGTTGTTCTAGTCGGTTTTATTGNNCAGAGTTCGTACTTTGTCCCAGTGTAACAATTGTTGTTTCTGCTGCCGTTAATTGTTCATTGTATATGGCATGTTACGTATATACCGTGTGATCTGTAGGAATCTTCTTCGTACTTCATATTCTGGATANNTTGGTTTACCCAAACTATGCAAGTTCTGTTACTTTGATCTGTGTCTGACGAGTCTGTATTCGTTCAGTTTAGTTCCATGTATGAACGGATATAAANNGGATTTTCAGTTTAAGTTGATGTCCATCTAGTCCAGTTTACTATGTTGTATCTTATTTAATGTTGTGAATTCTGCCAAGGTCACTTCTTCTTCCACTAC]




>consensus_9303#3
AGTCTCATAAGTTGTCTAACTTCTTACCCAGTAATTGTAAATATAAATCAGGATCCCAGA
TTGCTGTCGTCACTCGAGTCAGTCCCTGCATGGATTGAAGTTAGACACAGCAGAAACATA
TCCTTATCGTTTTGGTTCATCATGACAGTACGTTTGGATGTTAGTGTTGTTGTTCTAGTC
GGTTTTATTGNNCAGAGTTCGTACTTTGTCCCAGTGTAACAATTGTTGTTTCTGCTGCCG
TTAATTGTTCATTGTATATGGCATGTTACGTATATACCGTGTGATCTGTAGGAATCTTCT
TCGTACTTCATATTCTGGATANNTTGGTTTACCCAAACTATGCAAGTTCTGTTACTTTGA
TCTGTGTCTGACGAGTCTGTATTCGTTCAGTTTAGTTCCATGTATGAACGGATATAAANN
GGATTTTCAGTTTAAGTTGATGTCCATCTAGTCCAGTTTACTATGTTGTATCTTATTTAA
TGTTGTGAATTCTGCCAAGGTCACTTCTTCTTCCACTAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9303#0      CGTCTACAATGATTAGTAGACTTGACTAGTTAAAATAAGAAAAATTAAATTTTCCATCCT 60
consensus_9303#1      ------------------------------------------------------------
consensus_9303#3      ------------------------------------------------------------
consensus_9303#2      ------------------------------------------------------------
                                                                                  

consensus_9303#0      TCATCTCTGATAATGGAAAATTATTGCGTAATGAGAATTTACTGTTAACATCGCATTTAT 120
consensus_9303#1      -------------------------------------ATCACTGGTA-CGAGGCATT-AT 21
consensus_9303#3      ------------------------------------------------------------
consensus_9303#2      --------------------------------------CATTTGTATGTTAAGCGTTAAT 22
                                                                                  

consensus_9303#0      TTGGCCACTAAAATTTATGAACTATTCTTCAAAAAATTGTTCGTCCGGTCAGCGATCAAA 180
consensus_9303#1      TTGGCCACTAAAATTTATGAACTATTTTTCAAAAAATTGTTCGTCCGGTCAGCGATCAAA 81
consensus_9303#3      --AGTCTCATAAGTTGTCTAACTTCTTACCCAGTAATTGTAAATATAA------ATCAGG 52
consensus_9303#2      GGGATTACGTAAAA-GATAAAAAGTTTATTTGATGACAACTATAACAG----AAAGACTT 77
                             *  **       **    *         *                  *     

consensus_9303#0      TTCCCATTTCTCTGTTGT-CATCTTTGTAAGCCC--AAATAAATGAGGATTGAGCTCTGT 237
consensus_9303#1      TTCCCATTTCTCTGTTGT-CATCTTTGTAAGCCC--AAATAAATGAGGATTGAGCTCTGT 138
consensus_9303#3      ATCCCAGATTGCTGTCGT-CACTCGAGTCAGTCCCTGCATGGATTGAAGTTAGACACAGC 111
consensus_9303#2      ACCACGCTTTTCTTCAGTACACATAAGTTCAATCTAGAACGTTCGATAGTGATTACCTCT 137
                        * *   *  **   ** **     **     *    *          *      *   

consensus_9303#0      GACGGNNCGTGATCTTTATAGCTGTTGTCCTCGGAAGGATCATAATCTATAGTTACTAA- 296
consensus_9303#1      GACGAAACGTGATCTTTATAGCTGTTGTCCTCGGAAGGATCATAATCTATAGTTACTAA- 197
consensus_9303#3      A--GAAACAT-ATCCTTATCGTTTTGGTTC--------ATCATGACAGTACGTTTGGAT- 159
consensus_9303#2      GTCTAACGATAAAATTGATGTTGGTTGTTTGTTAATTATTTTGAATACGTGACTAATATC 197
                               * *   * **     * **           *    *        *   *  

consensus_9303#0      -ACAAATGATATAACTCAAAGTTCGATTGCTAAGAGATGTTTCCCGTGTTTCATTCCTTT 355
consensus_9303#1      -ACAAATGATATAACTCAAAGTTCGATTGCTAAGAGATGTTTCCCGTGTTTCATTCCTTT 256
consensus_9303#3      -GTTAGTGTTGTTGTTCTAG--TCGGTT--------TTATTGNNCAGAGTTCGTAC--TT 206
consensus_9303#2      GACTATTTGTCCACTTTACCTATCAGGGGCTTGGCGAATGTGCTTGTGAAGAGCCTACTG 257
                          * *  *     *      **                *                 * 

consensus_9303#0      CACCCCTCCCAAAAGATCATTGATGACCTTTCTCTGTTGTTCCGTCT--TCCTTGTGGCT 413
consensus_9303#1      CACCCCTCCCAAAAGATCATTGATGACCTTTCTCTGTTGTTCCGTCT--TCCTTGTGGCT 314
consensus_9303#3      TGTCCCAGTGTAACAATTGTTG-----TTTCTGCTGCCGTTAATTGT--TCATTGTATAT 259
consensus_9303#2      CTTTTCAGACAAAGGTTTATAAAAATGTGTTCAGAAAACCTAGTAGGAGCACTTCTTTCT 317
                           *     **   *  *         *          *           ** *   *

consensus_9303#0      GTAA-CTTGATCTACCGATTTCCGGATAAA-A-GTAGTCTCATAAGTTGTCTAACTTCTT 470
consensus_9303#1      GTAA-CTTGATCTACCGATTTCCGGATAAA-A-GTAGTCTCATAAGTTGTCTAACTTCTT 371
consensus_9303#3      GGCA-TGTTACGTATATACCGTGTGATCTGTA-GGAATCTTCTTCGTACTTCATATTCTG 317
consensus_9303#2      ATCACTCCCATATACTTACCACAGTAAGTACATGTAAGCTTGTAAATCCAAT-TGTAAAT 376
                         *     *  **   *       *     * * *  **  *   *        *    

consensus_9303#0      ACCCAGTAATTGTAAATATAAATCAGGATCCCAGATTGCTGTCGTCACTCGAGTCAGTC- 529
consensus_9303#1      ACCCAGTAATTGTAAATATAAATCAGGATCCCAGATTGCTGTCGTCACTCGAGTCAGTC- 430
consensus_9303#3      GATANNT--TGGTTTACCCAAACTATG--CAAGTTCTGTTACTTTGATCTGTGTCTGACG 373
consensus_9303#2      GACGCTAGAAGATCACTACATATTATTCTACTGGTTGATTTTTCTTTCCTATTTTTGCAG 436
                                  *      * *  *              *    *        *  *   

consensus_9303#0      --CCTGCA-GGATTGAAGTTAGACACA-GCAGAAACATATCCTTATCG---TTTTGGTTC 582
consensus_9303#1      --CCTGCATGGATTGAAGTTAGACACA-GCAGAAACATATCCTTATCG---TTTTGGTTC 484
consensus_9303#3      AGTCTGTATTCGTTCAGTTTAGTTCCATGTATGAACGGATATAAANNGGATTTTCAGTTT 433
consensus_9303#2      AATCTCTTCTACTCATATCTGGATATG-GTTTACAAACAT-CAAGTCG-----TTACTTT 489
                         **       *      * *      *     *   **       *     *   ** 

consensus_9303#0      ATCATGACAGTACTTTGGATGTTAGTTTGCTGTTCAGTCGGTTTTATTGCAGAGTCGT-- 640
consensus_9303#1      ATCATGACAGTACTTTGGATGTTAGTTTGTTGTTCAGTCGGTTTTATTGCAGAGTCGT-- 542
consensus_9303#3      AAGTTGATGTCCATCTAGT--CCAGTTTACTATGTTGT--ATCTTATT-TAATGTTGTGA 488
consensus_9303#2      A-CTGGTCGACGATCGTATTCTTCATTTATT--CCAGTAGAACGGATTAAAGGATTCC-- 544
                      *    *       *           ***  *     **       ***  *   *     

consensus_9303#0      ACTTTGTCCAGTTAACATTGTTTTTCTCTGCCGTTATTTTCATTTATATGCATTTACGTA 700
consensus_9303#1      ACTTTGTCCAGTTAACATTGTTTTTCTCTGCCGTTATTTTCATTTATATGCATTTACGTA 602
consensus_9303#3      ATTCTGCCAAGGTCACTTCTTCTTCCACTAC----------------------------- 519
consensus_9303#2      ATTTAATTGATTCCATCAGTCCATTTACTATTTGTA------------------------ 580
                      * *      *    *        *   **                               

consensus_9303#0      ATACCGTTACTGAAGAATCTCTTCTACTCATATCTGGATATGGTTTACAAACATCAAGTC 760
consensus_9303#1      ATACCGTTACTGAAGGGGCTTGGCGAAT-GTGCTTGTGAGAGCC---------------- 645
consensus_9303#3      ------------------------------------------------------------
consensus_9303#2      ------------------------------------------------------------
                                                                                  

consensus_9303#0      GTTACTTTACTGGTCGACGATCGTATTCTTCATTTATTCCAGTAGAACGGATTAAAGGAT 820
consensus_9303#1      ------------------------------------------------------------
consensus_9303#3      ------------------------------------------------------------
consensus_9303#2      ------------------------------------------------------------
                                                                                  

consensus_9303#0      TTCATTTAATTGATTCCATCAGTCCATTTACTATTTGTACTTATTTAAGTTGTGAATTCG 880
consensus_9303#1      ------------------------------------------------------------
consensus_9303#3      ------------------------------------------------------------
consensus_9303#2      ------------------------------------------------------------
                                                                                  

consensus_9303#0      CCAAGGTCACTTCTTCTTCCACTACTACTACTTCTCCTACTACAGCTGATCCACAGAAAA 940
consensus_9303#1      ------------------------------------------------------------
consensus_9303#3      ------------------------------------------------------------
consensus_9303#2      ------------------------------------------------------------
                                                                                  

consensus_9303#0      CTGAATCATTATTCAATAAAGCTTCAACGACATTACAGACAGATTACGATCTTTTACCAT 1000
consensus_9303#1      ------------------------------------------------------------
consensus_9303#3      ------------------------------------------------------------
consensus_9303#2      ------------------------------------------------------------
                                                                                  

consensus_9303#0      TAATGCCAATCACTATGGACAATAAACAAATTCGATTTAAAGGTTGTGATCGTATTCCAT 1060
consensus_9303#1      ------------------------------------------------------------
consensus_9303#3      ------------------------------------------------------------
consensus_9303#2      ------------------------------------------------------------
                                                                                  

consensus_9303#0      TGCCTTATCTTGTATGGATGTTACGTTTGGCAAATACAGTTTTATTTCACTAAATTTTGA 1120
consensus_9303#1      ------------------------------------------------------------
consensus_9303#3      ------------------------------------------------------------
consensus_9303#2      ------------------------------------------------------------
                                                                                  

consensus_9303#0      TATGTCGCTAACATCATCTTTTTATTTTGTTATTTTAAAAAAATTATGTATTCACTTAGT 1180
consensus_9303#1      ------------------------------------------------------------
consensus_9303#3      ------------------------------------------------------------
consensus_9303#2      ------------------------------------------------------------
                                                                                  

consensus_9303#0      TACTGTTTACTATTCAATCGTTTTTTAAATAACCCTTAGTTATTTTACAGATTAAGCTTA 1240
consensus_9303#1      ------------------------------------------------------------
consensus_9303#3      ------------------------------------------------------------
consensus_9303#2      ------------------------------------------------------------
                                                                                  

consensus_9303#0      TGTATTATGGCACAAAATGCCTAGAAGTACATTTTTTTCTCCATGAATTCATTTTGCTAA 1300
consensus_9303#1      ------------------------------------------------------------
consensus_9303#3      ------------------------------------------------------------
consensus_9303#2      ------------------------------------------------------------
                                                                                  

consensus_9303#0      ATAAAAATGTGACTATTTTAAGAA 1324
consensus_9303#1      ------------------------
consensus_9303#3      ------------------------
consensus_9303#2      ------------------------