These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9316#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 963 fasta sequence [CTCGAGGCCANAATTCGGCACGAGGGCGTCTTCACTACTAACTAATTAAAATGAGAACAGATTTCATATATTTGTTATTCGCAATTACTCTATACTCACTTCTATGTCTAAACGTTAACAGTGCACAGATGCCAGAGACAACAGAAACTAATATAACATGTGAAATGAGAGAATCAGACTCAAACTCACATAATACTCACATGAATACAAAGCAATCGAGACAAAAAGAAAATCGAAATTCTCATGGAAACAGAAGTGATGAACACTCAAATAGAAATGATGTAGTCGGATTCCACTCCTCAGATGAAGTATTCCGACTGAAATACTCAAATCAAAGAAGAAGTGATATTTATACTAAAGGTTACCAAACATTCCTTGGAAAGCGTAGACGAGGCAGTAAATCACATGTGAGAACCACATTCAGAAGACGTTCTGGCTACGATTACAATGGTCGAAAAGAACGAAGTTCCACATTCGAAAGTTATGGTGAGGCAGACAGTTTCGATAGAAAGAAGATACGTGATGTGTTTGATGTGAATGGATATATTTCGGAGGGTCGAAAGCGTAGTAAATTTGGTGGATACATCCAAGACGAACGACATGGAGTTATGTTAGGTGGACATAAGTCGAAAACATCGAGGGATGATAAGCAATCCTCTGAAAGCAGAAGACACTCTGAAAAAAGTACTCATCGTCAGCTGTCTGCTAATCACACTTCAGAAAACATTGCAAGGAGAGATTCAAGTCACCGAAGTCGACCTGGAATGATAAGTAAATAATTATCTTAAATTTACACGTTTACACAGTAATGAAGATTCCTTGTTCGGAATTAATACTCAGTTTCCCATTCCTGTTTCTTTACGAATTGCATCAAACTAAAATATATCAACCATGAATTAGTGATGGTAAATCGTCAATGTATTCCATCCATCATTTGNTCACATCAATAATCAATATTATTTC] [+] EMBL CD082625 [CTCGAGGCCANAATTCGGCACGAGGGCGTCTTCACTACTAACTAATTAAAATGAGAACAGATTTCATATATTTGTTATTCGCAATTACTCTATACTCACTTCTATGTCTAAACGTTAACAGTGCACAGATGCCAGAGACAACAGAAACTAATATAACATGTGAAATGAGAGAATCAGACTCAAACTCACATAATACTCACATGAATACAAAGCAATCGAGACAAAAAGAAAATCGAAATTCTCATGGAAACAGAAGTGATGAACACTCAAATAGAAATGATGTAGTCGGATTCCACTCCTCAGATGAAGTATTCCGACTGAAATACTCAAATCAAAGAAGAAGTGATATTTATACTAAAGGTTACCAAACATTCCTTGGAAAGCGTAGACGAGGCAGTAAATCACATGTGAGAACCACATTCAGAAGACGTTCTGGCTACGATTACAATGGTCGAAAAGAACGAAGTTCCACATTCGAAAGTTATGGTGAGGCAGACAGTTTCGATAGAAAGAAGATACGTGATGTGTTTGATGTGAATGGATATATTTCGGAGGGTCGAAAGCGTAGTAAATTTGGTGGATACATCCAAGACGAACGACATGGAGTTATGTTAGGTGGACATAAGTCGAANACATCGAGGGATGAnn ] [+] EMBL AI976655 [ catgaatgGTCTTCACTACAAACTAATTAAGATGAGAACAGATTACATATATTTGTTATTCGCAATTACTCTATACTCACTTATATGTCTAAACGTTAACAGTGCACAGAGGCAAGAGACAACAGAAACTAATATAACATGTGAAATGAGAGAATCAGACTCAAACTCACATAATAGGCACATGAATACAAAGGAATCGAGACATAAAGAGAATCGAAATTCTCATGGAAACAGAAGCAGTGAACACTCAAATAGAAATGATGTAGTCGGATTCCACTCCTCAGATGAAGTATTCCGACTGAAATACTCACATCACAGAAGAAGTGATATTTATACTAAAGGTTACCAAACATTCC ] [+] EMBL AI975478 [ TTCATATATTTGTTATTCGCAATTACTCTATACTCACTTCTATGTCTAGAAGTTAACAGTGCACAGAGGCAAGAGACAACAGAAACTAATATAACAAGTGAAATGAGAGAATTAGACTCAAACTCACATAATAGTCACATGAATACAAAGCAATCGAGACAAAAAGAAAATCAAAATTCTCATGGACACAGAAGTAGTGAACATTCAAATAGAAATGATGTAGTCGGATTCCACTCCTCAGATGAAGTATTCCGACTGAAATACTCAAATCAAAGAAGAAGTGATATTTATACTAAAGGTTACCAAACATTCCTTGGAAAGCGTAAACGAGGC ] [+] EMBL BF936751 [ TTGTTATTCGCAATTACTCTATACTCACTTCTATGTCTAAACGTTAACAGTGCACAGATGCCAGAGACAACAGAAACTAATATAACATGTGAAATGAGAGAATCAGACTCAAACTCACATAATACTCACATGAATACAAAGCAATCGAGACAAAAAGAAAATCGAAATTCTCATGGAAACAGAAGTGATGAACACTCAAATAGAAATGATGTAGTCGGATTCCACTCCTCAGATGAAGTATTCCGACTGAAATACTCAAATCAAAGAAGAAGTGATATTTATACTAAAGGTTACCAAACATTCCTTGGAAAGCGTAGACGAGGCAGTAAATCACATGTGAGAACCACATTCAGAAGACGTTCTGGCTACGATTACAATGGTCGAAAAGAACGAAGTTCCACATTCGAAAGTTATGGTGAGGCAGACAGTTTCGATAGAAAGAAGATACGTGATGTGTTTGATGTGAATGGATATATTTCGGAGGGTCGAAAGCGTAGTAAATTTGGTGGATACATCCAAGACGAACGACATGGAGTTATGTTAGGTGGACATAAGTCGAAAACATCGAGGGATGATAAGCAATCCTCTGAAAGCAGAAGACACTCTGAAAAAAGTACTCATCGTCAGCTGTCTGCTAATCACACTTCAGAAAACATTGCAAGGAGAGATTCAAGTCACCGAAGTCGACCTGGAATGATAAGTAAATAATTATCTT ] [-] EMBL CD128858 [ AACGTTAACAGTGCACAGATGCCAGAGCCAACAGAAACTAATATAACATGTGAAATGAGAGAATCAGACTCAAACTCACATAATACTCACATGAATACAAAGCAATCGAGACAAAAAGAAAATCGAAATTCTCATGGAAACAGAAGTGATGAACACTCAAATAGAAATGATGTAGTCGGATTCCACTCCTCAGATGAAGTATTCCGACTGAAATACTCAAATCAAAGAAGAAGTGATATTTATACTAAAGGTTACCAAACATTCCTTGGAAAGCGTAGACGAGGCAGTAAATCACATGTGAGAACCACATTCAGAAGACGTTCTGGCTACGATTACAATGGTCGAAAAGAACGAAGTTCCACATTCGAAAGTTATGGTGAGGCAGACAGTTTCGATAGAAAGAAGATACGTGATGTGTTTGATGTGAATGGATATATTTCGGAGGGTCGAAAGCGTAGTAAATTTGGTGGATACGTCCAAGACGAACGACATGGAGTTATGTTAGGTG ] [+] EMBL CD081912 [ gacAAAATCGAAATTCTCATGGAAACAGAAGTGATGAACACTCAAATAGAAATGATGTAGTCGGATTCCACTCCTCAGATGAAGTATTCCGACTGAAATACTCAAATCAAAGAAGAAGTGATATTTATACTAAAGGTTACCAAACATTCCTTGGAAAGCGTAGACGAGGCAGTAAATCACATGTGAGAACCACATTCAGAAGACGTTCTGGCTACGATTACAATGGTCGAAAAGAACGAAGTTCCACATTCGAAAGTTATGGTGAGGCAGACAGTTTCGATAGAAAGAAGATACGTGATGTGTTTGATGTGAATGGATATATTTCGGAGGGTCGAAAGCGTAGTAAATTTGGTGGATACATCCAAGACGAACGACATGGAGTTATGTTAGGTGGACATAAGTCGAAAACATCGAGGGATGATAAGCAATCCTCTGAAAGCAGAAGACACTCTGAAAAAAGTACTCATCGTCAGCTGTCTGCTAATCACACTTCAGAAAACATTGCAAGGAGAGATTCAAGTCACCGAAGTCGACCTGGAATGATAAGTAAATAATTATCTTANATTTACACGTTTACACAGTAATGAAGATTCCTTGTTCGGAATTAATACTCAGTTTCCCATTCCTGGTTCTTTACGAATTGCATCANACTAAAATATATCAACCATGAATTAGTGATGGGTAATCGTCAATGTATTCCATCCATCATTTGNTCACATCAATAATCAATATTATT ] [+] EMBL BF936060 [ AATTCTCATGGAAACAGAAGTGATGAACACTCAAATAGAAATGATGTAGTCGGATTCCACTCCTCAGATGAAGTATTCCGACTGAAATACTCAAATCAAAGAAGAAGTGATATTTATACTAAAGGTTACCAAACATTCCTTGGAAAGCGTAGACGAGGCAGTAAATCACATGTGAGAACCACATTCAGAAGACGTTCTGGCTACGATTACAATGGTCGAAAAGAACGAAGTTCCACATTCGAAAGTTATGGTGAGGCAGACAGTTTCGATAGAAAGAAGATACGTGATGTGTTTGATGTGAATGGATATATTTCGGAGGGTCGAAAGCGTAGTAAATTTGGTGGATACATCCAAGACGAACGACATGGAGTTATGTTAGGTGGACATAAGTCGAAAACATCGAGGGATGATAAGCAATCCTCTGAAAGCAGAAGACACTCTGAAAAAAGTACTCATCGTCAGCTGTCTGCTAATCACACTT ] [-] EMBL CD076221 [ CACATGTGAGAACCACATTCAGAAGACGTTCTGGCTACGATTACAATGGTCGAAAAGAACGAAGTTCCACATTCGAAAGTTATGGTGAGGCAGACAGTTTCGATAGAAAGAAGATACGTGATGTGTTTGATGTGAATGGATATATTTCGGAGGGTCGAAAGCGTAGTAAATTTGGTGGATACATCCAAGACGAACGACATGGAGTTATGTTAGGTGGACATAAGTCGAAAACATCGAGGGATGATAAGCAATCCTCTGAAAGCAGAAGACACTCTGAAAAAAGTACTCATCGTCAGCTGTCTGCTAATCACACTTCAGAAAACATTGCAAGGAGAGATTCAAGTCACCGAAGTCGACCTGGAATGATAAGTAAATAATTATCTTAAATTTACACGTTTACACAGTAATGAAGATTCCTTGTTCGGAATTAATACTCAGTTTCCCATTCCTGTTTCTTTACGAATTGCATCAAACTAAAATATATCAACCATGAATTAGTGATGGTAAATCGTCAATGTATTCCATCCATCATTTGTTCACATCAATAATCAATATTATTTC] [-] EMBL CD126935 [ TCGATAGAAAGAAGATACGTGATGTGTTTGATGTGAATGGATATATTTCGGAGGGTCGAAAGCGTAGTAAATTTGGTGGATACATCCAAGACGAACGACATGGAGTTATGTTAGGTGGACATAAGTCGAAAACATCGAGGGATGATAAGCAATCCTCTGAAAGCAGAAGACACTCTGAAAAAAGTACTCATCGTCAGCTGTCTGCTAATCACACTTCAGAAAACATTGCAAGGAGAGATTCAAGTCACCGAAGTCGACCTGGAATGATAAGTAAATAATTATCTTAAATTTACACGTTTACACAGTAATGAAGATTCCTTGTTCGGAATTAATACTCAGTTTCCCATTCCTGTTTCTTTACGAATTGCATCAAACTAAAATATATCAACCATGAATTAGTGATGGTAAATCGTCAATGTATTCCATCC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||