cluster # 9319

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Schistosoma mansoni
cluster # 9319 cluster # 9319 Sequences # 9 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9319#0 length = 1443 sequences # 6
consensus_9319#1 length = 570 sequences # 1

consensus_9319#2 length = 413 sequences # 1
consensus_9319#3 length = 379 sequences # 1

consensusID : consensus_9319#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1443
fasta sequence

                              [NCTCTGGCTCGAGGGCCATTTGCTACCGATTGCTTTCACTATTGAATTCGAGTGCATCCTATGCACTTACAAGATCGTTTGCTAACTTTCCATATCGTTCCTCTTCTACCAGATTTTCTCACTACTCTGCTTACTTCCTCAACTCAACATACTTTCAGCATAGACTGAAAGCACTGCACCACAAATGCTTACTGCTTGCAGAGAGGTTTATTTATCTCTAAAATACTCGTTCGTAGGCTGGAATTTAAGAAATGGTATTGTTAGTGAGACTTGCCTACCTGATGTCGTAATTGATCCAGAATTTGGCGGACGGGTTCCTACTATTTCACTTTTGACGGTTTCTTCGAAGGGTTCATACCTCTCTGCTGCAGATAACCTCAAGCGGCTGTTTCTGTATGTTAATAGAAATGGTCACTGGTTATTGGTTTCACAATTGAAGCTGCGTAAACAGGCATCGTGTCTTCTTTTTTCTCCGAGTGAGAAGTCACTACTTATTGGAGACAAGTCAGGAGATGTTNTCAACTCCCTTTGTGCCTGGAGAAGCCCATTCATGATACAGACTTGACTCTTCTTTGCGGACACCTCTCACTACTTAGTCACATGGCTATTTCGGAGGATGAAATGTACTTGGCGTCTTGTGATCGTGATGAAAAGATACGAATTAGTCGATTTTCCGAACCTTATGTTATCCAATCATTTTGTCTTGGTCATAAATCGTTCGTTTCTCAGCTTGGATTTATTCCTGACACTCGATATTTAATCTCAACAGGAGGAGATGAATGTATGAGTATTTGGAATTGTGAGTCGGGCCACTGTCTATCATCGTATTATGTTTCAAAAAGTGAACTTCCATCTCTTTCAGTTTCTACGGATTTGCAGTTCGATTTTAAGTCGGAAGCTGTTGTTTCTAGGTTATATACTATCAAAGATGTTGTCGTTTGTTGTTTTTTATCCAACCCAGTGCTGATGGCGTTTCATATTCATATAACTGAAGATGAAGTTGTCTCTTGGGGATCGAAAGCTTTTACTTCCACAG-AAGATAAAATGCCACTTACGGATATAGCTTTATGTTCAAATGATAATCGTATTATTGGACTGTGTTCTACTGGGACTAGTGTTCGTCTCTACTCCTGGAAATTGATTATTCAACACGATGCTTGCCAACCATCTTGCTCTGTCAAATGGGATGTCCCTCAAATTGTTGATTGCATATCAGACAACTTCCTTCTACAAGTTCCAGTTCCAAGTCCCCGAACGGAACTTTTGAAATTATTCTTCAAGTGTACAGATAATAGCTCAATGATAAAAGCATATGAATCAAATAAACAATTACATCAACACAATGTAACTCAACGTCATATACGTAGTCAAAAAATGCGCAAATTGAATAAAACTCTACAGAATTCTGTTGATAAAGAATTAAATGTATAAAAAAAACCCATT]

[+] EMBL CD082256             [NCTCTGGCTCGAGGGCCATTTGCTACCGATTGCTTTCACTATTGAATTCGAGTGCATCCTATGCACTTACAAGATCGTTTGCTAACTTTCCATATCGTTCCTCTTCTACCAGATTTTCTCACTACTCTGCTTACTTCCTCAACTCAACATACTTTCAGCATAGACTGAAAGCACTGCACCACAAATGCTTACTGCTTGCAGAGAGGTTTATTTATCTCTAAAATACTCGTTCGTAGGCTGGAATTTAAGAAATGGTATTGTTAGTGAGACTTGCCTACCTGATGTCGTAATTGATCCAGAATTTGGCGGACGGGTTCCTACTATTTCACTTTTGACGGTTTCTTCGAAGGGTTCATACCTCTCTGCTGCAGATAACCTCAAGCGGCTGTTTCTGTATGTTAATAGAAATGGTCACTGGTTATTGGTTTCACAATTGAAGCTGCGTAAACAGGCATCGTGTCTTCTTTTTTCTCCGAGTGAGAAGTCACTACTTATTGGAGACAAGTCAGGAGATGTTNTCAACTCCCTTTGTGCCTGGAGAAGCCCATTCATGATACAGACTTGACTCTTCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD084311             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          cgaggTTTGTGCCTGGAGAAGCCCATTCATGATACAGACTTGACTCTTCTTTGCGGACACCTCTCACTACTTAGTCACATGGCTATTTCGGAGGATGAAATGTACTTGGCGTCTTGTGATCGTGATGAAAAGATACGAATTAGTCGATTTTCCGAACCTTATGTTATCCAATCATTTTGTCTTGGTCATAAATCGTTCGTTTCTCAGCTTGGATTTATTCCTGACACTCGATATTTAATCTCAACAGGAGGAGATGAATGTATGAGTATTTGGAATTGTGAGTCGGGCCACTGTCTATCATCGTATTATGTTTCAAAAAGTGAACTTCCATCTCTTTCAGTTTCTACGGATTTGCAGTTCGATTTTAAGTCGGAAGCTGTTGTTTCTAGGTTATATACTATCAAAGATGTTGTCGTCTGTTGTTTTTTATCCAACCCAGTGCTGATGGCGTTTCATATTCATATAACTGAAGATGAAGTTGTCTCTTGAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD136535             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTCTCAGCTTGGATTTATTCCTGACACTCGATATTTAATCTCAACAGGAGGAGATGAATGTATGAGTATTTGGAATTGTGAGTCGGGCCACTGTCTATCATCGTATTATGTTTCAAAAAGTGAACTTCCATCTCTTTCAGTTTCTACGGATTTGCAGTTCGATTTTAAGTCGGAAGCTGTTGTTTCTAGGTTATATACTATCAAAGATGTTGTCGTTTGTTGTTTTTTATCCAACCCAGTGCTGATGGCGTTTCATATTCATATAACTGAAGATGAAGTTGTCTCTTGGGGATCGAAAGCTTTTACTTCCACAGAAAGAT AAATGCCACTTACGAATATAGCTTTATGTTC                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD188691             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CATCGTATTATGTTTCAAAAAGTGAACTTCCATCTCTTTCAGTTTCTACGGATTTGCAGTTCGATTTTAAGTCGGAAGCTGTTGTTTCTAGGTTATATACTATCAAAGATGTTGTCGTTTGTTGTTTTTTATCCAACCCAGTGCTGATGGCGTTTCATATTCATATAACTGAAGATGAAGTTGTCTCTTGGGGATCGAAAGCTTTTACTTCCACAG AAGATAAAATGCCACTTACGGATATAGCTTTATGTTCAAATGATAATCGTATTATTGGAC                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL BF936542             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TATACTATCAAAGATGTTGTCGTTTGTTGTTTTTTATCCAACCCAGTGCTGATGGCGTTTCATATTCATATAACTGAAGATGAAGTTGTCTCTTGGGGATCGAAAGCTTTTACTTCCACAG AAGATAAAATGCCACTTACGGATATAGCTTTATGTTCAAATGATAATCGTATTATTGGACTGTGTTCTACTGGGACTAGTGTTCGTCTCTACTCCTGGAAATTGATTATTCAACACGATGCTTGCCAACCATCTTGCTCTGTCAAATGGGATGTCCCTCAAATTGTTGATTGCATATCAGACAACTTCCTTCTACAAGTTCCAGTTCCAAGTCCCCGAACGGAACTTTTGAAATTATTCTTCAAGTGTACAGATAATAGCTCAATGATAAAAGCATATGAATCAAATAAACAATTACATCAACACAATGTAACTCAACGTCATATACGTAGTCAAAAAATGCGCAAATTGAATAAAACTCTACAGAATTCTGTTGATAAAGAATTAAATGTATAAAAAAAACCCATT]
[-] EMBL CD075863             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTTGGGGATCGAAAGCTTTTACTTCCACAG AAGATAAAATGCCACTTACGGATATAGCTTTATGTTCAAATGATAATCGTATTATTGGACTGTGTTCTACTGGGACTAGTGTTCGTCTCTACTCCTGGAAATTGATTATTCAACACGATGCTTGCCAACCATCTTGCTCTGTCAAATGGGATGTCCCTCAAATTGTTGATTGCATATCAGACAACTTCCTTTTACAAGTTCCAGTTCCAAGTCCCCGAACGGAACTTTTGAAATTATTCTTCAAGTGTACAGATAATAGCTCAATGATACAAGCATATGAATCAAATAAACAATTACATCAACACAATGTAACTCAACGTCATATACGTAGTCAAAAAATGCGCAAATTGAATAAAACTCTACAGAATTCTGTTGATAAAGAATTAAATGTATAAAAAAAACCCATT]




>consensus_9319#0
NCTCTGGCTCGAGGGCCATTTGCTACCGATTGCTTTCACTATTGAATTCGAGTGCATCCT
ATGCACTTACAAGATCGTTTGCTAACTTTCCATATCGTTCCTCTTCTACCAGATTTTCTC
ACTACTCTGCTTACTTCCTCAACTCAACATACTTTCAGCATAGACTGAAAGCACTGCACC
ACAAATGCTTACTGCTTGCAGAGAGGTTTATTTATCTCTAAAATACTCGTTCGTAGGCTG
GAATTTAAGAAATGGTATTGTTAGTGAGACTTGCCTACCTGATGTCGTAATTGATCCAGA
ATTTGGCGGACGGGTTCCTACTATTTCACTTTTGACGGTTTCTTCGAAGGGTTCATACCT
CTCTGCTGCAGATAACCTCAAGCGGCTGTTTCTGTATGTTAATAGAAATGGTCACTGGTT
ATTGGTTTCACAATTGAAGCTGCGTAAACAGGCATCGTGTCTTCTTTTTTCTCCGAGTGA
GAAGTCACTACTTATTGGAGACAAGTCAGGAGATGTTNTCAACTCCCTTTGTGCCTGGAG
AAGCCCATTCATGATACAGACTTGACTCTTCTTTGCGGACACCTCTCACTACTTAGTCAC
ATGGCTATTTCGGAGGATGAAATGTACTTGGCGTCTTGTGATCGTGATGAAAAGATACGA
ATTAGTCGATTTTCCGAACCTTATGTTATCCAATCATTTTGTCTTGGTCATAAATCGTTC
GTTTCTCAGCTTGGATTTATTCCTGACACTCGATATTTAATCTCAACAGGAGGAGATGAA
TGTATGAGTATTTGGAATTGTGAGTCGGGCCACTGTCTATCATCGTATTATGTTTCAAAA
AGTGAACTTCCATCTCTTTCAGTTTCTACGGATTTGCAGTTCGATTTTAAGTCGGAAGCT
GTTGTTTCTAGGTTATATACTATCAAAGATGTTGTCGTTTGTTGTTTTTTATCCAACCCA
GTGCTGATGGCGTTTCATATTCATATAACTGAAGATGAAGTTGTCTCTTGGGGATCGAAA
GCTTTTACTTCCACAGAAGATAAAATGCCACTTACGGATATAGCTTTATGTTCAAATGAT
AATCGTATTATTGGACTGTGTTCTACTGGGACTAGTGTTCGTCTCTACTCCTGGAAATTG
ATTATTCAACACGATGCTTGCCAACCATCTTGCTCTGTCAAATGGGATGTCCCTCAAATT
GTTGATTGCATATCAGACAACTTCCTTCTACAAGTTCCAGTTCCAAGTCCCCGAACGGAA
CTTTTGAAATTATTCTTCAAGTGTACAGATAATAGCTCAATGATAAAAGCATATGAATCA
AATAAACAATTACATCAACACAATGTAACTCAACGTCATATACGTAGTCAAAAAATGCGC
AAATTGAATAAAACTCTACAGAATTCTGTTGATAAAGAATTAAATGTATAAAAAAAACCC
ATT

consensusID : consensus_9319#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 570
fasta sequence

                              [AGAAGTCACTACTTATTGGAGACAAGTCAGGAGATGTTTTCAAACTCCCTTTGTGCCTGGAGAAGCCCATTCATGATACAGACTTGACTCTTCTTTGCGGACACCTCTCACTACTTAGTCACATGGCTATTTCGGAGGATGAAATGTACTTGGCGTCTTGTGATCGTGATGAAAAGATACGAATTAGTCGATTTTCCGAACCTTATGTTATCCAATCATTTTGTCTTGGTCATAAATCGATGAATGTATGAGTATTTGGAATTGTGAGTCGGGCCACTGTCTATCATCGTATTATGTTTCAAAAAGTGAACTTCCATCTCTTTCAGTTTCTACGGATTTGCAGTTCGATTTTAAGTCGGAAGCTGTTGTTTCTAGGTTATATACTATCAAAGATGTTGTCGTTTGTTGTTTTTTATCCAACCCAGTGCTGATGGCGTTTCATATTCATATAACTGAAGATGAAGTTGTCTCTTGGGGATCGAAAGCTTTTACTTCCACAGAAGATAAAATGCCACTTACGGATATAGCTNTATGTTCAAATGATAATCGTATTATTGGACTGTGTTCTAC]

[+] EMBL CD185474             [AGAAGTCACTACTTATTGGAGACAAGTCAGGAGATGTTTTCAAACTCCCTTTGTGCCTGGAGAAGCCCATTCATGATACAGACTTGACTCTTCTTTGCGGACACCTCTCACTACTTAGTCACATGGCTATTTCGGAGGATGAAATGTACTTGGCGTCTTGTGATCGTGATGAAAAGATACGAATTAGTCGATTTTCCGAACCTTATGTTATCCAATCATTTTGTCTTGGTCATAAATCGATGAATGTATGAGTATTTGGAATTGTGAGTCGGGCCACTGTCTATCATCGTATTATGTTTCAAAAAGTGAACTTCCATCTCTTTCAGTTTCTACGGATTTGCAGTTCGATTTTAAGTCGGAAGCTGTTGTTTCTAGGTTATATACTATCAAAGATGTTGTCGTTTGTTGTTTTTTATCCAACCCAGTGCTGATGGCGTTTCATATTCATATAACTGAAGATGAAGTTGTCTCTTGGGGATCGAAAGCTTTTACTTCCACAGAAGATAAAATGCCACTTACGGATATAGCTNTATGTTCAAATGATAATCGTATTATTGGACTGTGTTCTAC]




>consensus_9319#1
AGAAGTCACTACTTATTGGAGACAAGTCAGGAGATGTTTTCAAACTCCCTTTGTGCCTGG
AGAAGCCCATTCATGATACAGACTTGACTCTTCTTTGCGGACACCTCTCACTACTTAGTC
ACATGGCTATTTCGGAGGATGAAATGTACTTGGCGTCTTGTGATCGTGATGAAAAGATAC
GAATTAGTCGATTTTCCGAACCTTATGTTATCCAATCATTTTGTCTTGGTCATAAATCGA
TGAATGTATGAGTATTTGGAATTGTGAGTCGGGCCACTGTCTATCATCGTATTATGTTTC
AAAAAGTGAACTTCCATCTCTTTCAGTTTCTACGGATTTGCAGTTCGATTTTAAGTCGGA
AGCTGTTGTTTCTAGGTTATATACTATCAAAGATGTTGTCGTTTGTTGTTTTTTATCCAA
CCCAGTGCTGATGGCGTTTCATATTCATATAACTGAAGATGAAGTTGTCTCTTGGGGATC
GAAAGCTTTTACTTCCACAGAAGATAAAATGCCACTTACGGATATAGCTNTATGTTCAAA
TGATAATCGTATTATTGGACTGTGTTCTAC

consensusID : consensus_9319#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 413
fasta sequence

                              [CATGTGCTATCGCCATTTGCTACCGATTGCTTTCACTATTGAATTCGAGTGCATCCTATGCACTTACAAGATCGTTTGCTAACTTTCCATATCGTTCCTCTTCTACCAGATTTTCTCACTACTCTGCTTACTTCCTCAACTCAACATACTTTCAGCATAGACTGAAAGCACTGCACCACAAATGCTTACTGCTTGCAGAGAGGTTTATTTATCTCTAAAATACTCGCTCGTAGGCTGGAATTTAAGAAATGGTATTGTTAGTGAGACTTGCCTACCTGATGTCGTAATTGATCCAGAATTTGGCGGACGGGTTCCTACTATTTCACTTTTGACGGGTTCTTCGAAGGGTCATACCTCTCTGCTGCAGATAACCTCAGGCGGCTGTTTCTGCATGTTAATAGAAATGGGCACTG]

[+] EMBL CD194394             [CATGTGCTATCGCCATTTGCTACCGATTGCTTTCACTATTGAATTCGAGTGCATCCTATGCACTTACAAGATCGTTTGCTAACTTTCCATATCGTTCCTCTTCTACCAGATTTTCTCACTACTCTGCTTACTTCCTCAACTCAACATACTTTCAGCATAGACTGAAAGCACTGCACCACAAATGCTTACTGCTTGCAGAGAGGTTTATTTATCTCTAAAATACTCGCTCGTAGGCTGGAATTTAAGAAATGGTATTGTTAGTGAGACTTGCCTACCTGATGTCGTAATTGATCCAGAATTTGGCGGACGGGTTCCTACTATTTCACTTTTGACGGGTTCTTCGAAGGGTCATACCTCTCTGCTGCAGATAACCTCAGGCGGCTGTTTCTGCATGTTAATAGAAATGGGCACTG]




>consensus_9319#2
CATGTGCTATCGCCATTTGCTACCGATTGCTTTCACTATTGAATTCGAGTGCATCCTATG
CACTTACAAGATCGTTTGCTAACTTTCCATATCGTTCCTCTTCTACCAGATTTTCTCACT
ACTCTGCTTACTTCCTCAACTCAACATACTTTCAGCATAGACTGAAAGCACTGCACCACA
AATGCTTACTGCTTGCAGAGAGGTTTATTTATCTCTAAAATACTCGCTCGTAGGCTGGAA
TTTAAGAAATGGTATTGTTAGTGAGACTTGCCTACCTGATGTCGTAATTGATCCAGAATT
TGGCGGACGGGTTCCTACTATTTCACTTTTGACGGGTTCTTCGAAGGGTCATACCTCTCT
GCTGCAGATAACCTCAGGCGGCTGTTTCTGCATGTTAATAGAAATGGGCACTG

consensusID : consensus_9319#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 379
fasta sequence

                              [ATTCACGATACAGACTTGACTCTTCTTTGCGGACACCTCTCACTACTTAGTCACATGGCTATTTCGGAGGATGAAATGTACTTGGCGTCTTGTGATCGTGATGAAAAGATACGAATTAGTCGATTTTCCGAACCTTATGTTATCCAATCATTTTGTCTTGGTCATAAATCGTAAGTTTAGTGTGTTGGATTAACTTTTAAAAGCAAACGACAGGTTCGTTTCTCAGCTTGGATTTATTCCTGACACTCGATATTTAATCTCAACAGGAGGAGATGAATGTATGAGTATTTGGAATTGTGAGTCGGGCCACTGTCTATCATCGTATTATGTTTCAAAAAGTGAACTTCCATCTCTTTCAGTTTCTACGGATTTGCAGTTC]

[+] EMBL CD132139             [ATTCACGATACAGACTTGACTCTTCTTTGCGGACACCTCTCACTACTTAGTCACATGGCTATTTCGGAGGATGAAATGTACTTGGCGTCTTGTGATCGTGATGAAAAGATACGAATTAGTCGATTTTCCGAACCTTATGTTATCCAATCATTTTGTCTTGGTCATAAATCGTAAGTTTAGTGTGTTGGATTAACTTTTAAAAGCAAACGACAGGTTCGTTTCTCAGCTTGGATTTATTCCTGACACTCGATATTTAATCTCAACAGGAGGAGATGAATGTATGAGTATTTGGAATTGTGAGTCGGGCCACTGTCTATCATCGTATTATGTTTCAAAAAGTGAACTTCCATCTCTTTCAGTTTCTACGGATTTGCAGTTC]




>consensus_9319#3
ATTCACGATACAGACTTGACTCTTCTTTGCGGACACCTCTCACTACTTAGTCACATGGCT
ATTTCGGAGGATGAAATGTACTTGGCGTCTTGTGATCGTGATGAAAAGATACGAATTAGT
CGATTTTCCGAACCTTATGTTATCCAATCATTTTGTCTTGGTCATAAATCGTAAGTTTAG
TGTGTTGGATTAACTTTTAAAAGCAAACGACAGGTTCGTTTCTCAGCTTGGATTTATTCC
TGACACTCGATATTTAATCTCAACAGGAGGAGATGAATGTATGAGTATTTGGAATTGTGA
GTCGGGCCACTGTCTATCATCGTATTATGTTTCAAAAAGTGAACTTCCATCTCTTTCAGT
TTCTACGGATTTGCAGTTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9319#1      ------------------------------------------------------------
consensus_9319#3      ------------------------------------------------------------
consensus_9319#0      NCTCTGGCTCGAGGGCCATTTGCTACCGATTGCTTTCACTATTGAATTCGAGTGCATCCT 60
consensus_9319#2      ------------------------------------------------------------
                                                                                  

consensus_9319#1      ------------------------------------------------------------
consensus_9319#3      ------------------------------------------------------------
consensus_9319#0      ATGCACTTACAAGATCGTTTGCTAACTTTCCATATCGTTCCTCTTCTACCAGATTTTCTC 120
consensus_9319#2      ------------------------------------------------------------
                                                                                  

consensus_9319#1      ------------------------------------------------------------
consensus_9319#3      ------------------------------------------------------------
consensus_9319#0      ACTACTCTGCTTACTTCCTCAACTCAACATACTTTCAGCATAGACTGAAAGCACTGCACC 180
consensus_9319#2      ------------------------------------------------------------
                                                                                  

consensus_9319#1      ------------------------------------------------------------
consensus_9319#3      ------------------------------------------------------------
consensus_9319#0      ACAAATGCTTACTGCTTGCAGAGAGGTTTATTTATCTCTAAAATACTCGTTCGTAGGCTG 240
consensus_9319#2      ------------------------------------------------------------
                                                                                  

consensus_9319#1      ------------------------------------------------------------
consensus_9319#3      ------------------------------------------------------------
consensus_9319#0      GAATTTAAGAAATGGTATTGTTAGTGAGACTTGCCTACCTGATGTCGTAATTGATCCAGA 300
consensus_9319#2      ------------------------------------------------------------
                                                                                  

consensus_9319#1      ------------------------------------------------------------
consensus_9319#3      ------------------------------------------------------------
consensus_9319#0      ATTTGGCGGACGGGTTCCTACTATTTCACTTTTGACGGTTTCTTCGAAGGGTTCATACCT 360
consensus_9319#2      ------------------------------------------------------------
                                                                                  

consensus_9319#1      ------------------------------------------------------------
consensus_9319#3      ------------------------------------------------------------
consensus_9319#0      CTCTGCTGCAGATAACCTCAAGCGGCTGTTTCTGTATGTTAATAGAAATGGTCACTGGTT 420
consensus_9319#2      ------------------------------------------------------------
                                                                                  

consensus_9319#1      -----------------------------------------------------------A 1
consensus_9319#3      ------------------------------------------------------------
consensus_9319#0      ATTGGTTTCACAATTGAAGCTGCGTAAACAGGCATCGTGTCTTCTTTTTTCTCCGAGTGA 480
consensus_9319#2      ------------------------------------------------------------
                                                                                  

consensus_9319#1      GAAGTCACTACTTATTGGAGACAAGTCAGGAGATGTTTTCAAACTCCCTTTGTGCCTGGA 61
consensus_9319#3      ------------------------------------------------------------
consensus_9319#0      GAAGTCACTACTTATTGGAGACAAGTCAGGAGATGTTNTCAA-CTCCCTTTGTGCCTGGA 539
consensus_9319#2      ------------------------------------------------------------
                                                                                  

consensus_9319#1      GAAGCCCATTCATGATACAGACT-TGACTCTTCTTTGCGGACACCTCTCACTACTTAGTC 120
consensus_9319#3      -------ATTCACGATACAGACT-TGACTCTTCTTTGCGGACACCTCTCACTACTTAGTC 52
consensus_9319#0      GAAGCCCATTCATGATACAGACT-TGACTCTTCTTTGCGGACACCTCTCACTACTTAGTC 598
consensus_9319#2      ---------------CATGTGCTATCGCCATTTGCTACCGATTGCTTTCACTATTGAATT 45
                                      *    ** *  *  **   * * **   ** ****** * * * 

consensus_9319#1      ACATGGCTATTTCGGAGGATGAAATGT-ACTTGGCGTCTTGTGATCGTGATGAAAAGATA 179
consensus_9319#3      ACATGGCTATTTCGGAGGATGAAATGT-ACTTGGCGTCTTGTGATCGTGATGAAAAGATA 111
consensus_9319#0      ACATGGCTATTTCGGAGGATGAAATGT-ACTTGGCGTCTTGTGATCGTGATGAAAAGATA 657
consensus_9319#2      CGAGTGCATCCTATGCACTTACAAGATCGTTTGCTAACTTTCCATATCGTTCCTCTTCTA 105
                        *  **    *  *    *  **  *   ***    ***   **   * *       **

consensus_9319#1      C--GAATTAGTCGATTTTCCGAACCTTATGTTATCCAATCATTTTGTCTTGGTCATAAAT 237
consensus_9319#3      C--GAATTAGTCGATTTTCCGAACCTTATGTTATCCAATCATTTTGTCTTGGTCATAAAT 169
consensus_9319#0      C--GAATTAGTCGATTTTCCGAACCTTATGTTATCCAATCATTTTGTCTTGGTCATAAAT 715
consensus_9319#2      CCAGATTTTCTCACTACTCTG---CTTACTTCCTCAACTCAACATACTTTCAGCATAGAC 162
                      *  ** **  **  *  ** *   ****  *  ** * ***   *   **   **** * 

consensus_9319#1      CGA-------------------------------TGAATGT------------------- 247
consensus_9319#3      CGTAAGT---------------------------TTAGTGTGT----------------- 185
consensus_9319#0      CGTTCGTTTCTCAGCTTGGATTTATTCCTGACACTCGATATTTAATCTCAACAGGAGGAG 775
consensus_9319#2      TGAAAGCACT------------------GCACCACAAATGCTTAC--------------- 189
                       *                                    *                     

consensus_9319#1      --------ATGAGTATTTGGAATTGTGAGTCGGGCCACTGTCTATCATCGTATTATGTTT 299
consensus_9319#3      -----TGGATTAACTTTTAAAAGCAAACGACAGGTTCGTTTCTCAGCTTGGATTTATTCC 240
consensus_9319#0      ATGAATGTATGAGTATTTGGAATTGTGAGTCGGGCCACTGTCTATCATCGTATTATGTTT 835
consensus_9319#2      -------TGCTTGCAGAGAGGTTTATTTATCTCTAAAATACTCGCTCGTAGGCTGGAATT 242
                                                    *       *              *      

consensus_9319#1      CAAAAAGTGAACTT-CCATCTCTTTCAGTTTCTACGGATTTGCAGTTCGATTTTAAGTCG 358
consensus_9319#3      TGACACTCGATATT-TAATCTCAACAGGAGGAGATGAATGTATGAGT--ATTTGGAATTG 297
consensus_9319#0      CAAAAAGTGAACTT-CCATCTCTTTCAGTTTCTACGGATTTGCAGTTCGATTTTAAGTCG 894
consensus_9319#2      TAAGAAATGGTATTGTTAGTGAGACTTGCCTACCTGATGTCGTAATT-GATCCAGAATTT 301
                        * *   *   **   *         *       *          *  **    * *  

consensus_9319#1      GAAGCTGTTGTTTCTAGGTTATATACTATCAAAGATGTTGTCGTTTGTTGTTTTTTATCC 418
consensus_9319#3      TGAGTCGG-GCCACTGTCTATCATCGTATTA----TGTTTCAAAAAGTGAACTTCCATCT 352
consensus_9319#0      GAAGCTGTTGTTTCTAGGTTATATACTATCAAAGATGTTGTCGTTTGTTGTTTTTTATCC 954
consensus_9319#2      GGCGGACGGGTTCCTA-CTATTTCACTTTTGACGGGTTCTTCGAAGGGTCATACCTCTCT 360
                         *     *   **   *       * *        *        *          ** 

consensus_9319#1      AACCCAGTG---CTGATGGCGTTTCATATTCATATAACTGAAGATGAAGTTGTCTCTTGG 475
consensus_9319#3      CTTTCAGTT---TCTACGGATTTGCA-GTTC----------------------------- 379
consensus_9319#0      AACCCAGTG---CTGATGGCGTTTCATATTCATATAACTGAAGATGAAGTTGTCTCTTGG 1011
consensus_9319#2      GCTGCAGATAACCTCAGGCGGCTGTTTCTGCATGTTAATAGAAATGGGCACTG------- 413
                          ***        * *    *     * *                             

consensus_9319#1      GGATCGAAAGCTTTTACTTCCACAGAAGATAAAATGCCACTTACGGATATAGCTNTATGT 535
consensus_9319#3      ------------------------------------------------------------
consensus_9319#0      GGATCGAAAGCTTTTACTTCCACAGAAGATAAAATGCCACTTACGGATATAGCTTTATGT 1071
consensus_9319#2      ------------------------------------------------------------
                                                                                  

consensus_9319#1      TCAAATGATAATCGTATTATTGGACTGTGTTCTAC------------------------- 570
consensus_9319#3      ------------------------------------------------------------
consensus_9319#0      TCAAATGATAATCGTATTATTGGACTGTGTTCTACTGGGACTAGTGTTCGTCTCTACTCC 1131
consensus_9319#2      ------------------------------------------------------------
                                                                                  

consensus_9319#1      ------------------------------------------------------------
consensus_9319#3      ------------------------------------------------------------
consensus_9319#0      TGGAAATTGATTATTCAACACGATGCTTGCCAACCATCTTGCTCTGTCAAATGGGATGTC 1191
consensus_9319#2      ------------------------------------------------------------
                                                                                  

consensus_9319#1      ------------------------------------------------------------
consensus_9319#3      ------------------------------------------------------------
consensus_9319#0      CCTCAAATTGTTGATTGCATATCAGACAACTTCCTTCTACAAGTTCCAGTTCCAAGTCCC 1251
consensus_9319#2      ------------------------------------------------------------
                                                                                  

consensus_9319#1      ------------------------------------------------------------
consensus_9319#3      ------------------------------------------------------------
consensus_9319#0      CGAACGGAACTTTTGAAATTATTCTTCAAGTGTACAGATAATAGCTCAATGATAAAAGCA 1311
consensus_9319#2      ------------------------------------------------------------
                                                                                  

consensus_9319#1      ------------------------------------------------------------
consensus_9319#3      ------------------------------------------------------------
consensus_9319#0      TATGAATCAAATAAACAATTACATCAACACAATGTAACTCAACGTCATATACGTAGTCAA 1371
consensus_9319#2      ------------------------------------------------------------
                                                                                  

consensus_9319#1      ------------------------------------------------------------
consensus_9319#3      ------------------------------------------------------------
consensus_9319#0      AAAATGCGCAAATTGAATAAAACTCTACAGAATTCTGTTGATAAAGAATTAAATGTATAA 1431
consensus_9319#2      ------------------------------------------------------------
                                                                                  

consensus_9319#1      ------------
consensus_9319#3      ------------
consensus_9319#0      AAAAAACCCATT 1443
consensus_9319#2      ------------