| These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs : 
 consensusID : consensus_9350#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 955 fasta sequence 
                              [CAGGCCAANAATTCGGCACGAGGGCCAATATGAAATTTAAATCTCATCTTCTAGAAAATAAAGCTCCTGTTACTCGTTCTGAGTTTCCTCTTATTATGGAAAGTTTGCGACAGTATAACGGTTTTATGATTTATTCAGTCACTGTAACAGTCCCACGCAATGGATCTATTTTTCTGAAGTTCTTTGGTATCTCAGACATAGCGCATGTTTATACTGGAGATAAATCTGGGCATTATACATTTCATGGGTCAATACGATATGTAAATAAAACATTTCAATTAAACAACGTGCATGACGTAAATAATATTACTATAATTGCTGAAAATGCCGGACATATTAATTATGGATCTGAAATGTATTCGGATGTAAAGGGTATTCTGGACCGGTAATATTGAATGGAAAAGAACTTCGAGATTGGACAATGATTCCAATTAGAGATCCGTTTGCTATAGTGAATATGAATAAAATGAAACATTTTCTGTCAGAAAAGAAGTGGCCAGTACCTGGATCTATTTATCATGGGGTATTCATTGTTGAGGAGTTGGGAGATACTTTCATCCAACCTGATAGTTTTGTGAGAGGAATAATATCAATTAATCGTCACCATGTAGGACGATTTGATCAGCAACAAGGACCACAGCTTCGACTGTATGTACCGAAAACATTTTTAAAACTGGGTAGAAATCATATAACAATCACAGAATTACAAGGTCCTATAAAAAATGATGCACATCATGTTCATATTACATTTCATGATCAAATGCTTTGGAAGTAATTATTTATCATTATGTGAACGTCCGTTTTAAGCCTTACAACTTATTCATTGGACAGAACTAATTTTCAAATTTCTTTTATTCATTATTATTTTTATTGCTGCCTGTTAATATACACAATAAACATTGACCATTTGTTAGATTCTCGTTAGTTTCTAAATGTTCTAAAAGTACATGTGTTT]
[+] EMBL CD080765             [CAGGCCAANAATTCGGCACGAGGGCCAATATGAAATTTAAATCTCATCTTCTAGAAAATAAAGCTCCTGTTACTCGTTCTGAGTTTCCTCTTATTATGGAAAGTTTGCGACAGTATAACGGTTTTATGATTTATTCAGTCACTGTAACAGTCCCACGCAATGGATCTATTTTTCTGAAGTTCTTTGGTATCTCAGACATAGCGCATGTTTATACTGGAGATAAATCTGGGCATTATACATTTCATGGGTCAATACGATATGTAAATAAAACATTTCAATTAAACAACGTGCATGACGTAAATAATATTACTATAATTGCTGAAAATGCCGGACATATTAATTATGGATCTGAAATGTATTCGGATGTAAAGGGTATTCTGGACCGGTAATATTGAATGGAAAAGAACTTCGAGATTGGACAATGATTCCAATTAGAGATCCGTTTGCTATAGTGAATATGAATAAAATGAAACATTTTCTGTCAGAAAAGAAGTGGCCAGTACCTGGATCTATTTATCATGGGGTATTCATTGTTGAGGAGTTGGGAGATACTTTCATCCAACCTGATAGTTTTGTGAGAGGAATAATATCAATTAATCGTCACCATGTAGGACGATTTGATCAGCAACAAGGACCACAGCTTCGACTGTATGTACCG AAACATTTTTAANACTGGGTAGAAATCATATAACAATCACAGAATTACCAGGTCCTATA                                                                                                                                                                                                                                             ]
[-] EMBL CD074689             [                                                                                                                                                                                                                                                                                                                                                                       TCGNATGTAAAGGGTATTCTGGACCGGTAATATTGAATGGAAAAGAACTTCGAGATTGGACAATGATTCCAATTAGAGATCCGTTTGCTATAGTGAATATGAATAAAATGAAACATTTTCTGTCAGAAAAGAAGTGGCCAGTACCTGGATCTATTTATCATGGGGTATTCATTGTTGAGGAGTTGGGAGATACTTTCATCCAACCTGATAGTTTTGTGAGAGGAATAATATCAATTAATCGTCACCATGTAGGACGATTTGATCAGCAACAAGGACCACAGCTTCGACTGTATGTACCGAAAACATTTTTAAAACTGGGTAGAAATCATATAACAATCACAGAATTACAAGGTCCTATAAAAAATGATGCACATCATGTTCATATTACATTTCATGATCAAATGCTTTGGAAGTAATTATTTATCATTATGTGAACGTCCGTTTTAAGCCTTACAACTTATTCATTGGACAGAACTAATTTTCAAATTTCTTTTATTCATTATTATTTTTATTGCTGCCTGTTAATATACACAATAAACATTGACCATTTGTTAGATTCTCGTTAGTTTCTAAATGTTCTAAAAGTACATGTGTTT]
[-] EMBL CD077259             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGTNTGCTATAGTGAATATGAATAAAATGAAACATTTTCTGTCAGAAAAGAAGTGGCCAGTACCTGGATCTATTTATCATGGGGTATTCATTGTTGAGGAGTTGGGAGATACTTTCATCCAACCTGATAGTTTTGTGAGAGGAATAATATCAATTAATCGTCACCATGTAGGACGATTTGATCAGCAACAAGGACCACAGCTTCGACTGTATGTACCGAAAACATTTTTAAAACTGGGTAGAAATCATATAACAATCACAGAATTACAAGGTCCTATAAAAAATGATGCACATCATGTTCATATTACATTTCATGATCAAATGCTTTGGAAGTAATTATTTATCATTATGTGAACGTCCGTTTTAAGCCTTACAACTTATTCATTGGACAGAACTAATTTTCAAATTTCTTTTATTCATTATTATTTTTATTGCTGCCTGTTAATATACACAATAAACATTGACCATTTGTTAGATTCTCGTTAGTTTCTAAATGTTCTAAAAGTACATGTGTTT]
[-] EMBL CD075819             [                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTGCTATAGTGAATATGAATAAAATGAACCATTTTCTGTCAGAAAAGAAGTGGCCAGTACCTGGATCTATTTATCATGGGGTATTCATTGTTGAGGAGTTGGGAGATACTTTCATCCAACCTGATAGTTTTGTGAGAGGAATAATATCAATTAATCGTCCCCATGTAGGACGATTTGATCAGCAACAAGGACCCCAGCTTCGACTGTATGTACCGAAAACATTTTTAAAACTGGGTAGAAATCATATACCAATCCCAGAATTCCAAGGTCCTATAAAAAATGATGCACATCATGTTCATATTACATTTCATGATCAAATGCTTTGGAAGTAATTATTTATCATTATGTGAACGTCCGTTTTAAGCCTTACAACTTATTCATTGGACAGAACTAATTTTCAAATTTCTTTTATTCATTATTATTTTTATTGCTGCCTGTTAATATACCCAATAAACATTGCCCATTTGTTAGATTCTCGTTAGTTTTTAAATGTTTTAAAAGTACATGTGTTT]
consensusID : consensus_9350#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 825 fasta sequence 
                              [AGCGTAAATATGTTAGTCCTTTCACGGTGGAACTAATTTTGGATATTGGAACGGTGGTGCAATGACCTGAATCATCAATTACGAGTTATGATTATGATGCTCCAATCAGTGAAGCTGGTGATATAACAAGAAAATATATGATTATAAGAGATCTACTTTTCCGGAGAAAAGGCGCTG-AACCACCGAAGTTGCCAAGAAATACTACAAAGATTTCGTATGGTTGTGTCAATATGAAATTTAAATCTCATCTTCTAGAAAATAAAGCTCCTGTTACTCGTTCTGAGTTTCCTCTTATTATGGAAAGTTTGCGACAGTATAACGGTTTTATGATTTATTCAGTCACTGTAACAGTCCCACGCAATGGATCTATTTTTCTGAAGTTCTTTGGTATCTCAGACATAGCGCATGTTTATACTGGAGATAAATCTGGGCATTATACATTTCATGGGTCAATACGATATGTAAATAAAACATTTCAATTAAACAACGTGCATGACGTAAATAATATTACTATAATTGCTGAAAATGCCGGACATATTAATTATGGATCTGAAATGTATTCGGATGTAAAGGGTATTACTGGACCGGTAATATTGAATGGAAAAGAACTTCGAGATTGGACAATGATTCCAATTAGAGATCCGTTTGCTATAGTGAATATGAATAAAATGAAACATTNTCTGTCAGAAAAGAAGTGGCCAGTACCTGGATCTATTTATCATGGGGTATTCATTGTTGAGGAGTTGGGAGATACTTTCATCCAACCTGATAGTTNTGTGAGAGGAATAATATCAATTAATCGTCACCATGTAGGACGATTTGATN]
[+] EMBL CD126253             [AGCGTAAATATGTTAGTCCTTTCACGGTGGAACTAATTTTGGATATTGGAACGGTGGTGCAATGACCTGAATCATCAATTACGAGTTATGATTATGATGCTCCAATCAGTGAAGCTGGTGATATAACAAGAAAATATATGATTATAAGAGATCTACTTTTCCGGAGAAAAGGCGCTGTAACCACCGAAGTTGTCAACAAATACTACAAAGATTTCGTATGGTTGTGTCAATATGAAATTTAAATCTCATCTTCTAGAAAATAAAGCTCCTGTTACTCGTTCTGAGTTTCCTCTTATTATGGAAAGTTTGCGACAGTATAACGGTTTTATGATTTATTCAGTCACTGTAACAGTCCCACGCAATGGATCTATTTTTCTGAAGTTCTTTGGTATCTCAGACATAGCGCATGTTTATACTGGAGATAAATCTGGGCATTATACATTTCATGGGTCAATACGATATGTAAATAAAACATTTCAATTAAACAACGTGCATGACGTAAATAATATTACTATAATTGCTGAAAATGCCGGAgct                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD082207             [                    acgaggacGGAACTAATTTTGGATTTTGGAACGGTGGTGCTA GACCTGAATCATCAATCACGAGTTATGATTATGATGCTCCAATCAGTGAAGCTGGTGATATAACAAGAAAATATATGATAATAAGAGATCTACTTTTCCGGAGAAAAGGCACTG AACCACCGAAGTTGCCAAGAAATACTACAAAGATTTCGTATGGTTGTGTCAATATGAAATTTAAATCTCATCTTCTAGAAAATAAAGCTCCTGTTACTCGTTCTGAGTTTCCTCTTATTATGGAAAGTTTGCGACAGTATAACGGTTTTATGATTTATTCAGTCACTGTAACAGTCCCACGCAATGGATCTATTTTTCTGAAGTTCTTTGGTATCTCAGACATAGCGCATGTTTATACTGGAGATAAATCTGGGCATTATACATTTCATGGGTCAATACGATATGTAAATAAAACATTTCAATTAAACAACGTGCATGACGTAAATAATATTACTATAATTGCTGAAAATGCCGGACATATTAATTATGGATCTGAAATGTATTCGGATGTAAAGGGTATTACTGGACCGGTAATATTGAATGGAAAAGAACTTCGAGATTGGACAATGATTCCAATTAGAGATCCGTTTGCTATAGTGAATATGAATAAAATGAAACATTNTCTGTCAGAAAA                                                                                                                                      ]
[+] EMBL CD081978             [                                                                                                                                                                                G AACCACCGAAGTTGCCAAGAAATACTACAAAGATTTCGTATGGTTGTGTCAATATGAAATTTAAATCTCATCTTCTAGAAAATAAAGCTCCTGTTACTCGTTCTGAGTTTCCTCTTATTATGGAAAGTTTGCGACAGTATAACGGTTTTATGATTTATTCAGTCACTGTAACAGTCCCACGCAATGGATCTATTTTTCTGAAGTTCTTTGGTATCTCAGACATAGCGCATGTTTATACTGGAGATAAATCTGGGCATTATACATTTCATGGGTCAATACGATATGTAAATAAAACATTTCAATTAAACAACGTGCATGACGTAAATAATATTACTATAATTGCTGAAAATGCCGGACATATTAATTATGGATCTGAAATGTATTCGGATGTAAAGGGTATTACTGGACCGGTAATATTGAATGGAAAAGAACTTCGAGATTGGACAATGATTCCAATTAGAGATCCGTTTGCTATAGTGAATATGAATAAAATGAAACATTTTCTGTCAGAAAAGAAGTGGCCAGTACCTGGATCTATTTATCATGGGGTATTCATTGTTGAGGAGTTGGGAGATACTTTCATCCAACCTGATAGTTNTGTGAGAGGAATAATATCAATTAATCGTCACCATGTAGGACGATTTGATN]
[+] EMBL CD083885             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCATGA  TAAATAATATTACTATAATTGCTGAAAATGCCGGACATATTAATTATGGATCTGAAATGTATTCGGATGTAAAGGGTATTAC                                                                                                                                                                                                                                                     ]
consensusID : consensus_9350#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 368 fasta sequence 
                              [AGCACGCCTACATTTGGGGGAAAATGTCATAATTTTTACATCGGATGGTCCATCCAACGGTTTATTAAAATGTGGTTCGTCTGACAAACGCTATCTAGCAACAGTTAACTTTGGTCCTACAACTGCTCCTGTACCTAAGGTTTTCAAAGTATTGGAGGATTTCCGACAGAATCAACCCTGGGTAAATAGTGAATATTATGTTGGTTGGTTAGACGTGTGGGGCGGGGATCATCATAAAACTAATCCTGAATGGGCGGTGGATGGACTGAATCGCCTAATCAGCTACTCGATGAGAGTCAACGTAAATATGTATATGTTTCAGGGTGGAACTAATTTTGGATTTTGGAACGGTGGTGCAAGACCTGAAT]
[+] EMBL AW017004             [AGCACGCCTACATTTGGGGGAAAATGTCATAATTTTTACATCGGATGGTCCATCCAACGGTTTATTAAAATGTGGTTCGTCTGACAAACGCTATCTAGCAACAGTTAACTTTGGTCCTACAACTGCTCCTGTACCTAAGGTTTTCAAAGTATTGGAGGATTTCCGACAGAATCAACCCTGGGTAAATAGTGAATATTATGTTGGTTGGTTAGACGTGTGGGGCGGGGATCATCATAAAACTAATCCTGAATGGGCGGTGGATGGACTGAATCGCCTAATCAGCTACTCGATGAGAGTCAACGTAAATATGTATATGTTTCAGGGTGGAACTAATTTTGGATTTTGGAACGGTGGTGCAAGACCTGAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9350#0      ------------------------------------------------------------
consensus_9350#1      AGCGTAAATATGTTAGTCCTTTCACGGTGGAACTAATTTTGGATATTGGAACGGTGGTGC 60
consensus_9350#2      ------------------------------------------------------------
                                                                                  
consensus_9350#0      ------------------------------------------------------------
consensus_9350#1      AATGACCTGAATCATCAATTACGAGTTATGATTATGATGCTCCAATCAGTGAAGCTGGTG 120
consensus_9350#2      ------------------------------------------------------------
                                                                                  
consensus_9350#0      ------------------------------------------------------------
consensus_9350#1      ATATAACAAGAAAATATATGATTATAAGAGATCTACTTTTCCGGAGAAAAGGCGCTGAAC 180
consensus_9350#2      ------------------------------------------------------------
                                                                                  
consensus_9350#0      -------------------CAGGCCAANAATTCGGCACGA--GGGCCAATATGAAATTTA 39
consensus_9350#1      CACCGAAGTTGCCAAGAAATACTACAAAGATTTCGTATGGTTGTGTCAATATGAAATTTA 240
consensus_9350#2      ------------------------------------------------------------
                                                                                  
consensus_9350#0      AATCTCATCTTCTAGAAAATAAAGCTCCTGTTACTCGTTCTGAGTTTCCTCTTATTATGG 99
consensus_9350#1      AATCTCATCTTCTAGAAAATAAAGCTCCTGTTACTCGTTCTGAGTTTCCTCTTATTATGG 300
consensus_9350#2      ------------------------------------------------------------
                                                                                  
consensus_9350#0      AAAGTTTGCGACAGTATAACGGTTTTATGATTTATTCAGTCACTGTAACAGTCCCACGCA 159
consensus_9350#1      AAAGTTTGCGACAGTATAACGGTTTTATGATTTATTCAGTCACTGTAACAGTCCCACGCA 360
consensus_9350#2      -----------------------------------------------------------A 1
                                                                                 *
consensus_9350#0      ATGGATCTATTTTTCTGAAGTTCTTTGGTATCTCAGACATAGCGCATGTTTATACTGGAG 219
consensus_9350#1      ATGGATCTATTTTTCTGAAGTTCTTTGGTATCTCAGACATAGCGCATGTTTATACTGGAG 420
consensus_9350#2      GCACGCCTACATTTGGGGGAAAATGTCATAATTTTTACAT--CGGATGGTCCATCCAACG 59
                            ***  ***  *      * *  **  *   ****  ** *** *    *    *
consensus_9350#0      ATAAATCTGGGCATTATACATTTCATGGGTCAATACGATATGTAAATAAAACATTTCAAT 279
consensus_9350#1      ATAAATCTGGGCATTATACATTTCATGGGTCAATACGATATGTAAATAAAACATTTCAAT 480
consensus_9350#2      GTTTATTAAAATGTGGTTCGTCTGACA----AACGCTATCTAGCAACAGTTAACTTTGGT 115
                       *  **       *  * * * * *      **  * ** *   ** *    * **   *
consensus_9350#0      TAAACAACGTGCATGACGTAAATAATATTACTATAATTGCTGAAAATGCCGGACATA-TT 338
consensus_9350#1      TAAACAACGTGCATGACGTAAATAATATTACTATAATTGCTGAAAATGCCGGACATA-TT 539
consensus_9350#2      CCTACAAC-TGC-TCCTGTACCTAAGGTTTTCAAAGTATTGGAGGATTTCCGACAGAATC 173
                         ***** *** *   ***  ***  **   * * *    **  **  * **** * * 
consensus_9350#0      AATTATGGATCTGAAATGTATTCGGATGTAAAGGGTATT-CTGGACCGGTAATATTGAAT 397
consensus_9350#1      AATTATGGATCTGAAATGTATTCGGATGTAAAGGGTATTACTGGACCGGTAATATTGAAT 599
consensus_9350#2      AACCCTGGGTAAATAGTGAATATTATGTTGGTTGGTTAGACGTGTGGGGCGGGGATCATC 233
                      **   *** *    * ** **       *    ***    *  *   **      * *  
consensus_9350#0      GGAAAAGAACTTCGAGATTGGACAATGATTCCAATTAGAGATCCGTTTGCTATAGTGAAT 457
consensus_9350#1      GGAAAAGAACTTCGAGATTGGACAATGATTCCAATTAGAGATCCGTTTGCTATAGTGAAT 659
consensus_9350#2      ATAAAACTAATCCT-GAATGGGCGGTGGATGGACTGAATCGCCTAATCAGC-TACTCGAT 291
                        ****  * * *  ** *** *  **  *  * * *     *   *     ** *  **
consensus_9350#0      ATGAATAAAATGAAACATTTTCTGTCAGAAAAGAAGTGGCCAGTACCTGGATCTATTTAT 517
consensus_9350#1      ATGAATAAAATGAAACATTNTCTGTCAGAAAAGAAGTGGCCAGTACCTGGATCTATTTAT 719
consensus_9350#2      GAGAGTCAACGTAAATAT-GTATATGTTTCAGGGTGGAACTAAT-TTTGGATTTTGGAAC 349
                        ** * **   *** **  * * *     * *  *   * * *   ***** *    * 
consensus_9350#0      CATGGGGTATTCATTGTTGAGGAGTTGGGAGATACTTTCATCCAACCTGATAGTTTTGTG 577
consensus_9350#1      CATGGGGTATTCATTGTTGAGGAGTTGGGAGATACTTTCATCCAACCTGATAGTTNTGTG 779
consensus_9350#2      GGTGGTGCAAGACCTGAAT----------------------------------------- 368
                        *** * *     **                                            
consensus_9350#0      AGAGGAATAATATCAATTAATCGTCACCATGTAGGACGATTTGATCAGCAACAAGGACCA 637
consensus_9350#1      AGAGGAATAATATCAATTAATCGTCACCATGTAGGACGATTTGATN-------------- 825
consensus_9350#2      ------------------------------------------------------------
                                                                                  
consensus_9350#0      CAGCTTCGACTGTATGTACCGAAAACATTTTTAAAACTGGGTAGAAATCATATAACAATC 697
consensus_9350#1      ------------------------------------------------------------
consensus_9350#2      ------------------------------------------------------------
                                                                                  
consensus_9350#0      ACAGAATTACAAGGTCCTATAAAAAATGATGCACATCATGTTCATATTACATTTCATGAT 757
consensus_9350#1      ------------------------------------------------------------
consensus_9350#2      ------------------------------------------------------------
                                                                                  
consensus_9350#0      CAAATGCTTTGGAAGTAATTATTTATCATTATGTGAACGTCCGTTTTAAGCCTTACAACT 817
consensus_9350#1      ------------------------------------------------------------
consensus_9350#2      ------------------------------------------------------------
                                                                                  
consensus_9350#0      TATTCATTGGACAGAACTAATTTTCAAATTTCTTTTATTCATTATTATTTTTATTGCTGC 877
consensus_9350#1      ------------------------------------------------------------
consensus_9350#2      ------------------------------------------------------------
                                                                                  
consensus_9350#0      CTGTTAATATACACAATAAACATTGACCATTTGTTAGATTCTCGTTAGTTTCTAAATGTT 937
consensus_9350#1      ------------------------------------------------------------
consensus_9350#2      ------------------------------------------------------------
                                                                                  
consensus_9350#0      CTAAAAGTACATGTGTTT 955
consensus_9350#1      ------------------
consensus_9350#2      ------------------
                                        
 | 
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||