cluster # 9354

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Schistosoma mansoni
cluster # 9354 cluster # 9354 Sequences # 9 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9354#0 length = 1161 sequences # 5
consensus_9354#1 length = 1023 sequences # 2

consensus_9354#2 length = 475 sequences # 1
consensus_9354#3 length = 325 sequences # 1

consensusID : consensus_9354#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1161
fasta sequence

                              [CCTCCGAGCCAANAATTCGGCACGAGGGTAATAATGAATGTAGTAGTGATTGTGGGTTAGTGAATAATCTTAATGCTCTACCTCCTACACCAATTAATTCTCATTTCCCATGGAGTCAAAATAATCAGAAATGCACAGAAGAATCGCGTCGACAATCATCTCTTTCACGAGGTCTAGGTTCAGTTCGTAGCTGGAAACGTGATTCTTCAAGAGATAGGCATAAAATGTACAAAACCCTACCATCTGGAGTAGTCAATAAAATAATGTGCTTTCCAATGGTAGACTTGAAATTCGTAAATACGGGTTCCAGAATTCCTACAGTCAAGCTAAAATTTGATGATCCC-AAAAGATTTTTCGATTCAAATTTCCGGTATGATGATGTAAAACTCATCCAAAATGTATACACACATATTCGTCAGAGACGTAAAAGAGCTTCATTTTATTATAATCCATGTAATCCTGAGAGTACTAAATCATCGGAACCAAATGTAAAAGATAATACTGGGCGCTTGGGACCATCAAATTTGCGTTCAACTGTTGGTCGTCAATTAAAGCGTCACACACATAATACTCGTATCGCGATGTCGGCGACGCAAAACAATGAACTAGCTGAACTTGTAAACAATAATGATAATGATGATGACGATGAATTTACTGACCCACCAACTCCATCAGATGAACCGAATGATGATGAAGAGAATCAACAGTACAAATAAATATTTTGTGCCCTATGTTTTTTCTACTTTGAATCCAAATTGCTTTCACTTTTTTCCCCCAGTTAGTAACTTGTGTATCGAACCAATAATATATTCATCTATTTGCTTTCTTTTTTAAAATAACTTTTTTTTCAGAAAACAAGATTATATACATTCATAATATATTTTGTGCCAAAATTTTAATCTGGGATTTAATAAATGATTGGTAATAAAATTTTCTTTTGGTTAAAAGTAAAGAAAGTATATTTTATTGATTTACTTCCTCCTTTTTTATTGCATCAATATCCTTGTATGAAACATCATGACTAGAATTGCTGTGGATATTTGTTTGATCACAAGTATTATTTTTATTTGAACGCTTAAGAAATTGCATCATTATATTTGAGCTACCATAAGATTTAATCATTTTCCTGTAAATAAGTAATGGAAAATAAAAATAATTCAT]

[+] EMBL CD081240             [CCTCCGAGCCAANAATTCGGCACGAGGGTAATAATGAATGTAGTAGTGATTGTGGGTTAGTGAATAATCTTAATGCTCTACCTCCTACACCAATTAATTCTCATTTCCCATGGAGTCAAAATAATCAGAAATGCACAGAAGAATCGCGTCGACAATCATCTCTTTCACGAGGTCTAGGTTCAGTTCGTAGCTGGAAACGTGATTCTTCAAGAGATAGGCATAAAATGTACAAAACCCTACCATCTGGAGTAGTCAATAAAATAATGTGCTTTCCAATGGTAGACTTGAAATTCGTAAATACGGGTTCCAGAATTCCTACAGTCAAGCTAAAATTTGATGATCCC AAAAGATTTTTCGATTCAAATTTCCGGTATGAGGATGTAAAACTCATCCAAAATGTATACACACATATTCGTCAGAGACGTAAAAGAGCTTCATTTTATTATAATCCATGTAATCCTGAGAGTACTAAATCATCGGAACCAAATGTAAAAGATAATACTGGGCGCTTGGGACCATCAAATTTGCGTTCAACTGTTGGTCGTCAATTAAAGCGTCACACACATAATACTCGTATCGCGATGTCGGCGACGCATAACAATGAACTAGCTGAACTTGTGAACAATAATGATAATGATGATGACGATGAATTTACTGATCCACCAACTCCATCAGATGAACCGAATGATGATGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL BG930549             [                                                                                                                                                                                                                                                                                                                                GTCAAGCTAAATTTTGATGATCCCAAAAAGTTTTTTCGATTCAAATTTCCGGTAGAATGATGTAAAACTCATCCAAAATGTATACACACATATTCGTCAGAGACGTAAAAGAGCTTCATTTTATTATAATCCATGTAATCCTGAGAGTACTAAATCATCGGAACCAAATGTAAAAGATAATACTGGGCGCTTGGGACCATCAAATTTGCGTTCAACTGTTGGTCGTCAATTAAAGCGTCACACACATAATACTCGTATCGCGATGTCGGCGACGCAAAACAATGAACTAGCTGAACTTGTAAACAATAATGATAATGATGATGACGATGAATTCACTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL BG931346             [                                                                                                                                                                                                                                                                                                                                            TTTGATGATCCC AAAAGATTTTTCGATTCAAATTTCCGGTATGATGATGTAAAACTCATCCAAAATGTATACACACATATTCGTCAGAGACGTAAAAGAGCTTCATTTTATTATAATCCATGTAATCCTGAGAGTACTAAATCATCGGAACCAAATGTAAAAGATAATACTGGGCGCTTGGGACCATCAAATTTGCGTTCAACTGTTGGTCGTCAATTAAAGCGTCACATACATAATACTCGTATCGCGATGTCGGCGACGCAAAACAATGAACTAGCTGAACTTGTAAACAATAATGATAATGATGATGACGATGAATTTACTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL BG930661             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TAATACTGGGCGCTTGGGACCATCAAATNTGCGTTCAACTGTTGGTCGTCAATTAAAGCGTCACACACATAATACTCGTATCGCGATGTCGGCGACGCAAAACAATGAACTAGCTGAACTTGTAAACAATAATGATAATGATGATGACGATGAATTTACTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD075071             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGATAATGATGATGACGATGAATTTACTGATCCACCAACTCCAACAAATGAACCGAATGATGATGAAGAGAATCAACAGTACAAATAAATATTTTGTGCCCTATGTTTTTTCTACTTTGAATCCAAATTGCTTTCACTTTTTTCCCCCAGTTAGTAACTTGTGTATCGAACCAATAATATATTCATCTATTTGCTTTCTTTTTTAAAATAACTTTTTTTTCAGAAAACAAGATTATATACATTCATAATATATTTTGTGCCAAAATTTTAATCTGGGATTTAATAAATGATTGGTAATAAAATTTTCTTTTGGTTAAAAGTAAAGAAAGTATATTTTATTGATTTACTTCCTCCTTTTTTATTGCATCAATATCCTTGTATGAAACATCATGACTAGAATTGCTGTGGATATTTGTTTGATCACAAGTATTATTTTTATTTGAACGCTTAAGAAATTGCATCATTATATTTGAGCTACCATAAGATTTAATCATTTTCCTGTAAATAAGTAATGGAAAATAAAAATAATTCAT]




>consensus_9354#0
CCTCCGAGCCAANAATTCGGCACGAGGGTAATAATGAATGTAGTAGTGATTGTGGGTTAG
TGAATAATCTTAATGCTCTACCTCCTACACCAATTAATTCTCATTTCCCATGGAGTCAAA
ATAATCAGAAATGCACAGAAGAATCGCGTCGACAATCATCTCTTTCACGAGGTCTAGGTT
CAGTTCGTAGCTGGAAACGTGATTCTTCAAGAGATAGGCATAAAATGTACAAAACCCTAC
CATCTGGAGTAGTCAATAAAATAATGTGCTTTCCAATGGTAGACTTGAAATTCGTAAATA
CGGGTTCCAGAATTCCTACAGTCAAGCTAAAATTTGATGATCCCAAAAGATTTTTCGATT
CAAATTTCCGGTATGATGATGTAAAACTCATCCAAAATGTATACACACATATTCGTCAGA
GACGTAAAAGAGCTTCATTTTATTATAATCCATGTAATCCTGAGAGTACTAAATCATCGG
AACCAAATGTAAAAGATAATACTGGGCGCTTGGGACCATCAAATTTGCGTTCAACTGTTG
GTCGTCAATTAAAGCGTCACACACATAATACTCGTATCGCGATGTCGGCGACGCAAAACA
ATGAACTAGCTGAACTTGTAAACAATAATGATAATGATGATGACGATGAATTTACTGACC
CACCAACTCCATCAGATGAACCGAATGATGATGAAGAGAATCAACAGTACAAATAAATAT
TTTGTGCCCTATGTTTTTTCTACTTTGAATCCAAATTGCTTTCACTTTTTTCCCCCAGTT
AGTAACTTGTGTATCGAACCAATAATATATTCATCTATTTGCTTTCTTTTTTAAAATAAC
TTTTTTTTCAGAAAACAAGATTATATACATTCATAATATATTTTGTGCCAAAATTTTAAT
CTGGGATTTAATAAATGATTGGTAATAAAATTTTCTTTTGGTTAAAAGTAAAGAAAGTAT
ATTTTATTGATTTACTTCCTCCTTTTTTATTGCATCAATATCCTTGTATGAAACATCATG
ACTAGAATTGCTGTGGATATTTGTTTGATCACAAGTATTATTTTTATTTGAACGCTTAAG
AAATTGCATCATTATATTTGAGCTACCATAAGATTTAATCATTTTCCTGTAAATAAGTAA
TGGAAAATAAAAATAATTCAT

consensusID : consensus_9354#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1023
fasta sequence

                              [CATAATACATTTTTTTCCAAAATTTTAATCTGCGATTTAATAAATGATTGGTAATAAAATTTTCTTTTGGTTAAAAGTAAAGAAAGTATATTCTATTGATTTACTTCCTCCTTTTTTATTGCATCAATATCCTTGTATGAAACATCATGACTAGAATTGCTGTGGATATTTGTTTGATCACAAGTATTATTTTTATTTGAACGCTTAAGAAATTGCATCATTATATTTGAGCTACCATAAGATTTAATCATTTTCTTGTGTTCTTCTTCTTCACTAATAGGTTTAATACAATTAGGCTCGTTATACGTGGAATTGTTGACCTGAGACGTAACGGGATATTTAATGACAGATACATTGTCCAGATTGTGTGCAAGATCAGTGAGAAATTCATATGCTTGTTTATAATTGGATTCAGCTGGATCCAGCCACTCATAAATATCATCATCGTTATCTAAAATGACAGGCATTCTTGAATGCACATCTGCCATGATGCCCTTTGAACTTGTGGTTATTATGGTATATGAATACATTTGTTTCTCATAATTATGAGCAAATAAACCTGCCATCATAAGTAATTTCTCAGGATCTGAGGGGCAAAAATAAAATGGTTGTTTTTTGTTGATTCCAACTTTCCATTCATAAAATCCCTGAACCACAACTACACATCGTTTGCCTTCTTGCAATGAACACTTGNTAGAGCGTTTATCTAATAATGATTCAATACGAGCGTTGAAGGTGTGGAAAGTGGAAGTTGAGTCTCTATGAATAAATGCAGGAATCAAACCCCAGCGCATCACTTGAAGTGAGTGGCCTTTGTCCTTTGTATCAGTGAACTGGTTTGAAACTAGCACTGGTGTGAATGATCCTGGAGATATATTATAAGACGGATTATACTTTTGACCACCAGGAGCATTGTGCCAGCTAGGCTGCCCTATTTCTTTGTTGTTACGAAGATTAAGATGGCATTTGGCACATATTGTGCTCGGCTCNCAAGGCACAAGCCGTTTTCCCACACAGTTCCTC]

[+] EMBL CD073748             [CATAATACATTTTTTTCCAAAATTTTAATCTGCGATTTAATAAATGATTGGTAATAAAATTTTCTTTTGGTTAAAAGTAAAGAAAGTATATTCTATTGATTTACTTCCTCCTTTTTTATTGCATCAATATCCTTGTATGAAACATCATGACTAGAATTGCTGTGGATATTTGTTTGATCACAAGTATTATTTTTATTTGAACGCTTAAGAAATTGCATCATTATATTTGAGCTACCATAAGATTTAATCATTTTCTTGTGTTCTTCTTCTTCACTAATAGGTTTAATACAATTAGGCTCGTTATACGTGGAATTGTTGACCTGAGACGTAACGGGATATTTAATGACAGATACATTGTCCAGATTGTGTGCAAGATCAGTGAGAAATTCATATGCTTGTTTATAATTGGATTCAGCTGGATCCAGCCACTCATAAATATCATCATCGTTATCTAAAATGACAGGCATTCTTGAATGCACATCTGCCATGATGCCCTTTGAACTTGTGGTTATTATGGTATATGAATACATTTGTTTCTCATAATTATGAGCAAATAAACCTGCCATCATAAGTAATTTCTCAGGATCTGAGGGGCAAAAATAAAATGGTTGTTTTTTGTTGATTCCAACTTTCCATTCATAAAATCCCTGAACCACAACTACACATCGTTTGCCTTCTTGCAATGAACACTTGNTAG                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD079478             [                                                                                                                                                                                                                                                                                                                                                                  TTGTCCAGATTGTGTGCAAGATCAGTGAAAAATTCATATGCTTGTTTATAATTGGATTCAGCTGGATCCAGCCACTCATAAATATCATCATCGTTATCTAAAATGACAGGCATTCTTGAATGCACATCTGCCATGATGCCCTTTGAACTTGTGGTTATTATGGTATATGAATACATTTGTTTCTCATAATTATGAGCAAATAAACCTGCCATCATAAGTAATTTCTCAGGATCTGAGGGGCAAAAATAAAATGGTTGTTTTTTGTTGATTCCAACTTTCCATTCATAAAATCCCTGAACCACAACTACACATCGTTTGCCTTCTTGCAATGAACACTTGTAAGAGCGTTTATCTAATAATGATTCAATACGAGCGTTGAAGGTGTGGAAAGTGGAAGTTGAGTCTCTATGAATAAATGCAGGAATCAAACCCCAGCGCATCACTTGAAGTGAGTGGCCTTTGTCCTTTGTATCAGTGAACTGGTTTGAAACTAGCACTGGTGTGAATGATCCTGGAGATATATTATAAGACGGATTATACTTTTGACCACCAGGAGCATTGTGCCAGCTAGGCTGCCCTATTTCTTTGTTGTTACGAAGATTAAGATGGCATTTGGCACATATTGTGCTCGGCTCNCAAGGCACAAGCCGTTTTCCCACACAGTTCCTC]




>consensus_9354#1
CATAATACATTTTTTTCCAAAATTTTAATCTGCGATTTAATAAATGATTGGTAATAAAAT
TTTCTTTTGGTTAAAAGTAAAGAAAGTATATTCTATTGATTTACTTCCTCCTTTTTTATT
GCATCAATATCCTTGTATGAAACATCATGACTAGAATTGCTGTGGATATTTGTTTGATCA
CAAGTATTATTTTTATTTGAACGCTTAAGAAATTGCATCATTATATTTGAGCTACCATAA
GATTTAATCATTTTCTTGTGTTCTTCTTCTTCACTAATAGGTTTAATACAATTAGGCTCG
TTATACGTGGAATTGTTGACCTGAGACGTAACGGGATATTTAATGACAGATACATTGTCC
AGATTGTGTGCAAGATCAGTGAGAAATTCATATGCTTGTTTATAATTGGATTCAGCTGGA
TCCAGCCACTCATAAATATCATCATCGTTATCTAAAATGACAGGCATTCTTGAATGCACA
TCTGCCATGATGCCCTTTGAACTTGTGGTTATTATGGTATATGAATACATTTGTTTCTCA
TAATTATGAGCAAATAAACCTGCCATCATAAGTAATTTCTCAGGATCTGAGGGGCAAAAA
TAAAATGGTTGTTTTTTGTTGATTCCAACTTTCCATTCATAAAATCCCTGAACCACAACT
ACACATCGTTTGCCTTCTTGCAATGAACACTTGNTAGAGCGTTTATCTAATAATGATTCA
ATACGAGCGTTGAAGGTGTGGAAAGTGGAAGTTGAGTCTCTATGAATAAATGCAGGAATC
AAACCCCAGCGCATCACTTGAAGTGAGTGGCCTTTGTCCTTTGTATCAGTGAACTGGTTT
GAAACTAGCACTGGTGTGAATGATCCTGGAGATATATTATAAGACGGATTATACTTTTGA
CCACCAGGAGCATTGTGCCAGCTAGGCTGCCCTATTTCTTTGTTGTTACGAAGATTAAGA
TGGCATTTGGCACATATTGTGCTCGGCTCNCAAGGCACAAGCCGTTTTCCCACACAGTTC
CTC

consensusID : consensus_9354#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 475
fasta sequence

                              [GTGCCAAAATTTTAATCTGGGATTTAATAAATGATTGGTAATAAAATTTTCTTTTGGTTAAAAGTAAAGAAAGTATATTCTATTGATTTACTTCCTCCTTTTTTATTGCATCAATATCCTTGTATGAGACATCATGACTAGAATTGCTGTGGATATTTGTTTGATCACAAGTATTATTTTTATTTGAACGCTTAAGAAATTGCATCATTATATTTGAGCTACCATAAGATTTAATCATTTTCTTGTGTTCTTCTTCTTCACTAATAGGTTTAATACAATTAGGCTCGTTATACGTGGAATTGTTGACCTGAGACGTAACGGGATATTTAATGACAGATACATTGTCCAGATTGTGTGCAAGATCAGTGAGAAATTCATATGCTTGTTTATAATTGGATTCAGCTGGATCCAGCCACTCATAAATATCATCATCGTTATCTAAAATGACCTTTAATCAGAAGACANATTAGAGAGT]

[+] EMBL CD136677             [GTGCCAAAATTTTAATCTGGGATTTAATAAATGATTGGTAATAAAATTTTCTTTTGGTTAAAAGTAAAGAAAGTATATTCTATTGATTTACTTCCTCCTTTTTTATTGCATCAATATCCTTGTATGAGACATCATGACTAGAATTGCTGTGGATATTTGTTTGATCACAAGTATTATTTTTATTTGAACGCTTAAGAAATTGCATCATTATATTTGAGCTACCATAAGATTTAATCATTTTCTTGTGTTCTTCTTCTTCACTAATAGGTTTAATACAATTAGGCTCGTTATACGTGGAATTGTTGACCTGAGACGTAACGGGATATTTAATGACAGATACATTGTCCAGATTGTGTGCAAGATCAGTGAGAAATTCATATGCTTGTTTATAATTGGATTCAGCTGGATCCAGCCACTCATAAATATCATCATCGTTATCTAAAATGACCTTTAATCAGAAGACANATTAGAGAGT]




>consensus_9354#2
GTGCCAAAATTTTAATCTGGGATTTAATAAATGATTGGTAATAAAATTTTCTTTTGGTTA
AAAGTAAAGAAAGTATATTCTATTGATTTACTTCCTCCTTTTTTATTGCATCAATATCCT
TGTATGAGACATCATGACTAGAATTGCTGTGGATATTTGTTTGATCACAAGTATTATTTT
TATTTGAACGCTTAAGAAATTGCATCATTATATTTGAGCTACCATAAGATTTAATCATTT
TCTTGTGTTCTTCTTCTTCACTAATAGGTTTAATACAATTAGGCTCGTTATACGTGGAAT
TGTTGACCTGAGACGTAACGGGATATTTAATGACAGATACATTGTCCAGATTGTGTGCAA
GATCAGTGAGAAATTCATATGCTTGTTTATAATTGGATTCAGCTGGATCCAGCCACTCAT
AAATATCATCATCGTTATCTAAAATGACCTTTAATCAGAAGACANATTAGAGAGT

consensusID : consensus_9354#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 325
fasta sequence

                              [GAACTTAGCTGAACTTGTAAACAATAATGGATAATGAGTGATGACGATGAATTTACTGATCCACCAACTCCAACAAATGAACCGAATGATGATGAAGAGAAACAACAGTACAAATAAATATTTTGTGCCCTATGTTTTTTTTACTTTGAATCCAAATTGCTTTCACTTTTTTCCCCCAGTTAGTAACTTGTGTATCGAACCAATAATATATTCATCTATTTGCTTTCTTTTTTAAAATAACTTTTTTTTCAGAAAACAAGATTATATATATTCATAATATATTTTGTGCCAAAATTTTAATCTGGGATTTAAATTTTCGCCGAAA]

[-] EMBL AW063012             [GAACTTAGCTGAACTTGTAAACAATAATGGATAATGAGTGATGACGATGAATTTACTGATCCACCAACTCCAACAAATGAACCGAATGATGATGAAGAGAAACAACAGTACAAATAAATATTTTGTGCCCTATGTTTTTTTTACTTTGAATCCAAATTGCTTTCACTTTTTTCCCCCAGTTAGTAACTTGTGTATCGAACCAATAATATATTCATCTATTTGCTTTCTTTTTTAAAATAACTTTTTTTTCAGAAAACAAGATTATATATATTCATAATATATTTTGTGCCAAAATTTTAATCTGGGATTTAAATTTTCGCCGAAA]




>consensus_9354#3
GAACTTAGCTGAACTTGTAAACAATAATGGATAATGAGTGATGACGATGAATTTACTGAT
CCACCAACTCCAACAAATGAACCGAATGATGATGAAGAGAAACAACAGTACAAATAAATA
TTTTGTGCCCTATGTTTTTTTTACTTTGAATCCAAATTGCTTTCACTTTTTTCCCCCAGT
TAGTAACTTGTGTATCGAACCAATAATATATTCATCTATTTGCTTTCTTTTTTAAAATAA
CTTTTTTTTCAGAAAACAAGATTATATATATTCATAATATATTTTGTGCCAAAATTTTAA
TCTGGGATTTAAATTTTCGCCGAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9354#0      CCTCCGAGCCAANAATTCGGCACGAGGGTAATAATGAATGTAGTAGTGATTGTGGGTTAG 60
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      ------------------------------------------------------------
consensus_9354#2      ------------------------------------------------------------
                                                                                  

consensus_9354#0      TGAATAATCTTAATGCTCTACCTCCTACACCAATTAATTCTCATTTCCCATGGAGTCAAA 120
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      ------------------------------------------------------------
consensus_9354#2      ------------------------------------------------------------
                                                                                  

consensus_9354#0      ATAATCAGAAATGCACAGAAGAATCGCGTCGACAATCATCTCTTTCACGAGGTCTAGGTT 180
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      ------------------------------------------------------------
consensus_9354#2      ------------------------------------------------------------
                                                                                  

consensus_9354#0      CAGTTCGTAGCTGGAAACGTGATTCTTCAAGAGATAGGCATAAAATGTACAAAACCCTAC 240
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      ------------------------------------------------------------
consensus_9354#2      ------------------------------------------------------------
                                                                                  

consensus_9354#0      CATCTGGAGTAGTCAATAAAATAATGTGCTTTCCAATGGTAGACTTGAAATTCGTAAATA 300
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      ------------------------------------------------------------
consensus_9354#2      ------------------------------------------------------------
                                                                                  

consensus_9354#0      CGGGTTCCAGAATTCCTACAGTCAAGCTAAAATTTGATGATCCCAAAAGATTTTTCGATT 360
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      ------------------------------------------------------------
consensus_9354#2      ------------------------------------------------------------
                                                                                  

consensus_9354#0      CAAATTTCCGGTATGATGATGTAAAACTCATCCAAAATGTATACACACATATTCGTCAGA 420
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      ------------------------------------------------------------
consensus_9354#2      ------------------------------------------------------------
                                                                                  

consensus_9354#0      GACGTAAAAGAGCTTCATTTTATTATAATCCATGTAATCCTGAGAGTACTAAATCATCGG 480
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      ------------------------------------------------------------
consensus_9354#2      ------------------------------------------------------------
                                                                                  

consensus_9354#0      AACCAAATGTAAAAGATAATACTGGGCGCTTGGGACCATCAAATTTGCGTTCAACTGTTG 540
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      ------------------------------------------------------------
consensus_9354#2      ------------------------------------------------------------
                                                                                  

consensus_9354#0      GTCGTCAATTAAAGCGTCACACACATAATACTCGTATCGCGATGTCGGCGACGCAAAACA 600
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      ------------CATAATACATTTTTTTCCAAAATTTTAATCTGCGATTTAATAAATGAT 48
consensus_9354#2      -------------------------GTGCCAAAATTTTAATCTGGGATTTAATAAATGAT 35
                                                                                  

consensus_9354#0      ATGAACT-AGCTGAACTTGTAAACAATAATG-ATAATGA-TGATGACGATGAATTTACTG 657
consensus_9354#3      --GAACTTAGCTGAACTTGTAAACAATAATGGATAATGAGTGATGACGATGAATTTACTG 58
consensus_9354#1      TGGTAATAAAATTTTCTTTTGGTTAAAAGTAAAGAAAGTATATT--CTATTGATTTACTT 106
consensus_9354#2      TGGTAATAAAATTTTCTTTTGGTTAAAAGTAAAGAAAGTATATT--CTATTGATTTACTT 93
                        * * * *  *   *** *    ** * *  * ** *  *  *  * **  ******* 

consensus_9354#0      ACCCACCA---ACTCCATCAGATGAACCGAATGATG-ATGAAGAGAATCAACAGTACAAA 713
consensus_9354#3      ATCCACCA---ACTCCAACAAATGAACCGAATGATG-ATGAAGAGAAACAACAGTACAAA 114
consensus_9354#1      CCTCCTTTTTTATTGCATCAATATCCTTGTATGAAACATCATGACTAGAATTGCTGTGGA 166
consensus_9354#2      CCTCCTTTTTTATTGCATCAATATCCTTGTATGAGACATCATGACTAGAATTGCTGTGGA 153
                         *       * * ** **        * ****   ** * **  *  *    *    *

consensus_9354#0      TAAATATTTTGTGCCCTATGTTTTTTCTACTTTGAATCCAAATTGCTTTCACTTTTTTCC 773
consensus_9354#3      TAAATATTTTGTGCCCTATGTTTTTTTTACTTTGAATCCAAATTGCTTTCACTTTTTTCC 174
consensus_9354#1      TATTTGTTTGATCACAAGTATTATTTTTATTTGAACGCTTAAGAAATTGCATCATTATAT 226
consensus_9354#2      TATTTGTTTGATCACAAGTATTATTTTTATTTGAACGCTTAAGAAATTGCATCATTATAT 213
                      **  * ***  *  *   * ** *** ** **  *  *  **    ** **   ** *  

consensus_9354#0      CCCAGTTAGTAACTTGTGTATCGAACCAATAATATATTCATCTATTTGCTTTCTTTTTTA 833
consensus_9354#3      CCCAGTTAGTAACTTGTGTATCGAACCAATAATATATTCATCTATTTGCTTTCTTTTTTA 234
consensus_9354#1      TTGAGCTACCATAAGATTTAATCATTTTCTTGTGT-TCTTCTTCTTCACTAATAGGTTTA 285
consensus_9354#2      TTGAGCTACCATAAGATTTAATCATTTTCTTGTGT-TCTTCTTCTTCACTAATAGGTTTA 272
                         ** **  *     * **   *     *  * * *     * **  **      ****

consensus_9354#0      AAATAACTTTTTTTTCAGAAAACAAGATTATATACAT------TCATAATATATTTTGTG 887
consensus_9354#3      AAATAACTTTTTTTTCAGAAAACAAGATTATATATAT------TCATAATATATTTTGTG 288
consensus_9354#1      ATACAATTAGGCTCGTTATACGTGGAATTGTTGACCTGAGACGTAACGGGATATTTAATG 345
consensus_9354#2      ATACAATTAGGCTCGTTATACGTGGAATTGTTGACCTGAGACGTAACGGGATATTTAATG 332
                      * * ** *    *      *      *** *  *  *      * *    ******  **

consensus_9354#0      CCAAAATTTTAATCTGGG--ATTTAATAAATGATTGGTAATAAAATTTTCTTTTGGTTAA 945
consensus_9354#3      CCAAAATTTTAATCTGGG--ATTTAAATTTTCGCCGAAA--------------------- 325
consensus_9354#1      ACAGATACATTGTCCAGATTGTGTGCAAGATCAGTGAGAAATTCATATGCTTGTTTATAA 405
consensus_9354#2      ACAGATACATTGTCCAGATTGTGTGCAAGATCAGTGAGAAATTCATATGCTTGTTTATAA 392
                       ** *    *  **  *    * *      *    *  *                     

consensus_9354#0      AAGTAAAGAAAGTATATTTTATTGATTTACTTCCTCCTTTTTTATTGCATCAATATCCTT 1005
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      TTGGATTCAGCTGGATCCAGCCACTCATAAATATCATCATCGTTATCTAAAATGACAGGC 465
consensus_9354#2      TTGGATTCAGCTGGATCCAGCCACTCATAAATATCATCATCGTTATCTAAAATGACCTTT 452
                                                                                  

consensus_9354#0      GTATGAAACATCATGACTAGAATTGCTGTGGATATTTGTTTGATCACAAGTATTATTTTT 1065
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      ATTCTTGAATGCACATCTGCCATGATGCCCTTTGAACTTGTGGTTATTATGGTATATGAA 525
consensus_9354#2      AATCA-GAAGACANATTAGAGAGT------------------------------------ 475
                                                                                  

consensus_9354#0      ATTTGAACGCTTAAGAAATTGCATCATTATATTTGAGCTACCATAAGATTTAATCATTTT 1125
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      TACATTTGTTTCTCATAATTATGAGCAAATAAACCTGCCATCATAAGTAATTTCTCAGGA 585
consensus_9354#2      ------------------------------------------------------------
                                                                                  

consensus_9354#0      CCTGTAAATAAGTAATGGAAAATAAAAATAATTCAT------------------------ 1161
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      TCTGAGGGGCAAAAATAAAATGGTTGTTTTTTGTTGATTCCAACTTTCCATTCATAAAAT 645
consensus_9354#2      ------------------------------------------------------------
                                                                                  

consensus_9354#0      ------------------------------------------------------------
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      CCCTGAACCACAACTACACATCGTTTGCCTTCTTGCAATGAACACTTGNTAGAGCGTTTA 705
consensus_9354#2      ------------------------------------------------------------
                                                                                  

consensus_9354#0      ------------------------------------------------------------
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      TCTAATAATGATTCAATACGAGCGTTGAAGGTGTGGAAAGTGGAAGTTGAGTCTCTATGA 765
consensus_9354#2      ------------------------------------------------------------
                                                                                  

consensus_9354#0      ------------------------------------------------------------
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      ATAAATGCAGGAATCAAACCCCAGCGCATCACTTGAAGTGAGTGGCCTTTGTCCTTTGTA 825
consensus_9354#2      ------------------------------------------------------------
                                                                                  

consensus_9354#0      ------------------------------------------------------------
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      TCAGTGAACTGGTTTGAAACTAGCACTGGTGTGAATGATCCTGGAGATATATTATAAGAC 885
consensus_9354#2      ------------------------------------------------------------
                                                                                  

consensus_9354#0      ------------------------------------------------------------
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      GGATTATACTTTTGACCACCAGGAGCATTGTGCCAGCTAGGCTGCCCTATTTCTTTGTTG 945
consensus_9354#2      ------------------------------------------------------------
                                                                                  

consensus_9354#0      ------------------------------------------------------------
consensus_9354#3      ------------------------------------------------------------
consensus_9354#1      TTACGAAGATTAAGATGGCATTTGGCACATATTGTGCTCGGCTCNCAAGGCACAAGCCGT 1005
consensus_9354#2      ------------------------------------------------------------
                                                                                  

consensus_9354#0      ------------------
consensus_9354#3      ------------------
consensus_9354#1      TTTCCCACACAGTTCCTC 1023
consensus_9354#2      ------------------