cluster # 9362

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 9362 cluster # 9362 Sequences # 9 consensus # 7

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9362#0 length = 981 sequences # 2
consensus_9362#1 length = 674 sequences # 2
consensus_9362#2 length = 666 sequences # 1

consensus_9362#3 length = 531 sequences # 1
consensus_9362#4 length = 496 sequences # 1
consensus_9362#5 length = 394 sequences # 1
consensus_9362#6 length = 155 sequences # 1

consensusID : consensus_9362#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 981
fasta sequence

                              [AAAGATGTAACGTCCTCATATGGTAGTAAATTTGTAAATAATGACTTGATCCATTTGCCAAGCACATAATTATGTGCGACGGTTAGTGACAATACATCTCTTCCCAAGTCTCATGACCTAGGTGTTGGAAACCGACTGTTTGAACCATTAAGCATATTACATACATAATCTTATCATTATAGTCAGAATTAACCATTTGAAACATGTTAACATTCTTTATTGTGAATTATTCTTTCCTTGCCATAACTCTTAGTTGCCTTCATTAGGTCAGTCAACATCGAGCAGTGAATTCCATTCAAATTTGTATGGGTTATTAGCAATTCTATTGGCTTCTGTTACTAGCGGCTTTGCTGGTGTTTACCTTGAGAAAATATTTAAAGGAACGTCAACTTCGATCTGGATGCGAAATCTACAGCTAGGTCTCCTCGGTGTGCCAATCGGTCTGTTTGGAGTCTTCATTAATGATGCATCGAAAGTCAAAACTCTGGGTTTTTTTTACGGTTACACACCTATCGTTTGGATTGTAGTTATTCTTCAGGCGTTTGGAGGGCTAGCGATAGCCTTTGTCATGAGATATGCTGATAACATTTTAAAAGGTTTCTCTATGGGTCTATCAATGATTCTGTCATCTCTCATATCTTATTTCCTATTTGATGACTTTACTCCAAACATGTAAGAGTTAGCACAATATTGTTTTCTCCAGCCTTTAGTACGTAGTTGAGTAAACATTTCGTAATGTGGGAGCACCTTAAATACAATTTGTAGGCTAAGTACATTTCTATTTGTAGTTCTTCTTGTGGTCAATCAATAAAGTTGTTAATCTTTTTTATAAAATAAATTTAGCTAACCCGTCTGATCATGAAACGACAAACAACGAAGTATCCTTAGTCAGTTGTACACATACGAAAGTTTGTTTAAAATACATCCATTTACTAAGAATGTCATAGGTATCTAGAATGTATCTTTAATTTGATAAATGTT]

[+] EMBL CD082948             [AAAGATGTAACGTCCTCATATGGTAGTAAATTTGTAAATAATGACTTGATCCATTTGCCAAGCACATAATTATGTGCGACGGTTAGTGACAATACATCTCTTCCCAAGTCTCATGACCTAGGTGTTGGAAACCGACTGTTTGAACCATTAAGCATATTACATACATAATCTTATCATTATAGTCAGAATTAACCATTTGAAACATGTTAACATTCTTTATTGTGAATTATTCTTTCCTTGCCATAACTCTTAGTTGCCTTCATTAGGTCAGTCAACATCGAGCAGTGAATTCCATTCAAATTTGTATGGGTTATTAGCAATTCTATTGGCTTCTGTTACTAGCGGCTTTGCTGGTGTTTACCTTGAGAAAATATTTAAAGGAACGTCAACTTCGATCTGGATGCGAAATCTACAGCTAGGTCTCCTCGGTGTGCCAATCGGTCTGTTTGGAGTCTTCATTAATGATGCATCGAAAGTCAAAACTCTGGGTTTTTTTTACGGTTACACACCTATCGTTTGGATTGTAGTTATTCTTCAGGCGTTTGGAGGGCTAGCGATAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD076715             [                                                                                                                                                                                                                                                                                                                                                                                                            CTGGATGCGAAATCTACAGCTAGGTCTCCTCGGTGTGCCAATCGGTCTGTTTGGAGTCTTCATTAATGATGCATCGAAAGTCAAAACTCTGGGTTTTTTTTACGGTTACACACCTATCGTTTGGATTGTAGTTATTCTTCAGGCGTTTGGAGGGCTAGCGATAGCCTTTGTCATGAGATATGCTGATAACATTTTAAAAGGTTTCTCTATGGGTCTATCAATGATTCTGTCATCTCTCATATCTTATTTCCTATTTGATGACTTTACTCCAAACATGTAAGAGTTAGCACAATATTGTTTTCTCCAGCCTTTAGTACGTAGTTGAGTAAACATTTCGTAATGTGGGAGCACCTTAAATACAATTTGTAGGCTAAGTACATTTCTATTTGTAGTTCTTCTTGTGGTCAATCAATAAAGTTGTTAATCTTTTTTATAAAATAAATTTAGCTAACCCGTCTGATCATGAAACGACAAACAACGAAGTATCCTTAGTCAGTTGTACACATACGAAAGTTTGTTTAAAATACATCCATTTACTAAGAATGTCATAGGTATCTAGAATGTATCTTTAATTTGATAAATGTT]




>consensus_9362#0
AAAGATGTAACGTCCTCATATGGTAGTAAATTTGTAAATAATGACTTGATCCATTTGCCA
AGCACATAATTATGTGCGACGGTTAGTGACAATACATCTCTTCCCAAGTCTCATGACCTA
GGTGTTGGAAACCGACTGTTTGAACCATTAAGCATATTACATACATAATCTTATCATTAT
AGTCAGAATTAACCATTTGAAACATGTTAACATTCTTTATTGTGAATTATTCTTTCCTTG
CCATAACTCTTAGTTGCCTTCATTAGGTCAGTCAACATCGAGCAGTGAATTCCATTCAAA
TTTGTATGGGTTATTAGCAATTCTATTGGCTTCTGTTACTAGCGGCTTTGCTGGTGTTTA
CCTTGAGAAAATATTTAAAGGAACGTCAACTTCGATCTGGATGCGAAATCTACAGCTAGG
TCTCCTCGGTGTGCCAATCGGTCTGTTTGGAGTCTTCATTAATGATGCATCGAAAGTCAA
AACTCTGGGTTTTTTTTACGGTTACACACCTATCGTTTGGATTGTAGTTATTCTTCAGGC
GTTTGGAGGGCTAGCGATAGCCTTTGTCATGAGATATGCTGATAACATTTTAAAAGGTTT
CTCTATGGGTCTATCAATGATTCTGTCATCTCTCATATCTTATTTCCTATTTGATGACTT
TACTCCAAACATGTAAGAGTTAGCACAATATTGTTTTCTCCAGCCTTTAGTACGTAGTTG
AGTAAACATTTCGTAATGTGGGAGCACCTTAAATACAATTTGTAGGCTAAGTACATTTCT
ATTTGTAGTTCTTCTTGTGGTCAATCAATAAAGTTGTTAATCTTTTTTATAAAATAAATT
TAGCTAACCCGTCTGATCATGAAACGACAAACAACGAAGTATCCTTAGTCAGTTGTACAC
ATACGAAAGTTTGTTTAAAATACATCCATTTACTAAGAATGTCATAGGTATCTAGAATGT
ATCTTTAATTTGATAAATGTT

consensusID : consensus_9362#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 674
fasta sequence

                              [CCAGNATTCGGCACGAGGGCTGTGCTTTAGCTAGGAAATATCTTCAAGAGTTTGGATAAAATGTGGCAGCCTTATTTTCTTGACATGTCAAACCTCCTGCCTAATTTTATTGATGCGTGTTTCACGTTCAGTTCAGAATTCGGAGTTATACTCAGCTTCAACAGTTGTTGTATGTAGTGAATTTCTAAAACTTCTATTGTCGACAATTTTGATTTTCTACCAAGAAGGTCAAATTAAACGTAGTATTTCATCAATCTATAATCAAATAATCGTTCAGTATAATGATATGATTCAAATTTTAATTCCTTCAACTCTTTATATTGTACAGAATAATTTACTATATTTTGCCATTTCACATTTGAATGCTGTTTTATATCAGATACTTTATCAAAGTAAAATATTCACTACTGCTATGTTTATGATATTATTGTTAAATCACCACCTACGTTCAACTCAATGGTTTTCTCTTTTATTACTCAGTACAGGTATTATCTTAACACAGTTGCCTTCATTAGGTCAGTCAACATCGAGCAGTGAATTCCATTCAAATTTGTATGGGTTATTAGCAATTCTATTGGCTTCTGTTACTAGCGGCTNTGCTGGTGTTTACCTTGAGAAAATATTTAAAGGAACGTCAACTTCGATCTGGATGCGAAATCTACAGCTAGGTCTCC]

[+] EMBL CD083144             [CCAGNATTCGGCACGAGGGCTGTGCTTTAGCTAGGAAATATCTTCAAGAGTTTGGATAAAATGTGGCAGCCTTATTTTCTTGACATGTCAAACCTCCTGCCTAATTTTATTGATGCGTGTTTCACGTTCAGTTCAGAATTCGGAGTTATACTCAGCTTCAACAGTTGTTGTATGTAGTGAATTTCTAAAACTTCTATTGTCGACAATTTTGATTTTCTACCAAGAAGGTCAAATTAAACGTAGTATTTCATCAATCTATAATCAAATAATCGTTCAGTATAATGATATGATTCAAATTTTAATTCCTTCAACTCTTTATATTGTACAGAATAATTTACTATATTTTGCCATTTCACATTTGAATGCTGTTTTATATCAGATACTTTATCAAAGTAAAATATTCACTACTGCTATGTTTATGATATTATTGTTAAATCACCACCTACGTTCAACTCAATGGTTTTCTCTTTTATTACTCAGTACAGGTATTATCTTAACACAGTTGCCTTCATTAGGTCAGTCAACATCGAGCAGTGAATTCCATTCAAATTTGTATGGGTTATTAGCAATTCTATTGGCTTCTGTTACTAGCGGCTNTGCTGGTGTTTACCTTGAGAAAATATTTAAAGGAACGTCAACTTCGATCTGGATGCGAAATCTACAGCTAGGTCTCC]
[-] EMBL CD166738             [                                                                                                                                           TCGGAGTTATACTCAGCTTCAACAGTTGTTGTATGTAGTGAATTTCTAAAACTTCTATTGTCGACAATTTTGATTTTCTACCAAGAAGGTCAAATTAAACGTAGTATTTCATCAATCTATAATCAAATAATCGTTCAGTATAAGGATATGATTCAAATTTTAATTCCTTC ACTCTTTATATTGTACAGAATAA TTACTATATTTTGCCA                                                                                                                                                                                                                                                                                                                                    ]




>consensus_9362#1
CCAGNATTCGGCACGAGGGCTGTGCTTTAGCTAGGAAATATCTTCAAGAGTTTGGATAAA
ATGTGGCAGCCTTATTTTCTTGACATGTCAAACCTCCTGCCTAATTTTATTGATGCGTGT
TTCACGTTCAGTTCAGAATTCGGAGTTATACTCAGCTTCAACAGTTGTTGTATGTAGTGA
ATTTCTAAAACTTCTATTGTCGACAATTTTGATTTTCTACCAAGAAGGTCAAATTAAACG
TAGTATTTCATCAATCTATAATCAAATAATCGTTCAGTATAATGATATGATTCAAATTTT
AATTCCTTCAACTCTTTATATTGTACAGAATAATTTACTATATTTTGCCATTTCACATTT
GAATGCTGTTTTATATCAGATACTTTATCAAAGTAAAATATTCACTACTGCTATGTTTAT
GATATTATTGTTAAATCACCACCTACGTTCAACTCAATGGTTTTCTCTTTTATTACTCAG
TACAGGTATTATCTTAACACAGTTGCCTTCATTAGGTCAGTCAACATCGAGCAGTGAATT
CCATTCAAATTTGTATGGGTTATTAGCAATTCTATTGGCTTCTGTTACTAGCGGCTNTGC
TGGTGTTTACCTTGAGAAAATATTTAAAGGAACGTCAACTTCGATCTGGATGCGAAATCT
ACAGCTAGGTCTCC

consensusID : consensus_9362#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 666
fasta sequence

                              [CCTCGNAGGCCAAAATTCGGCACGAGGTGTGCTTTAGCTAGGTTGGGGTGCAGTGTGTTAGCTAGTCGCCTACTGGATAAGTATGAAAATAGAGCCTGTTGAGGGAAATATCTTCAAGAGTTTGGATAAAATGTGGCAGTCTTATTTTCTTGACATGTCAAACCTCCTGCCTAATTTTATTGATGCGTGTTTCACGTTCAGTTCAGAATTCGGAGTTATACTCAGCTTCAACAGTTGTTGTATGTAGTGAATTTCTAAAACTTCTATTGTCGACAATTTTGATTTTCTACCAAGAAGGTCAAATTAAACGTAGTATTTCATCAATCTATAATCAAATAATCGTTCAGTATTATGATATGATTCAAATTTTAATTCCTTCAACTCTTTATATTGTACAGAATAATTTACTATATTTTGCCATTTCACATTTGAATGCTGTTTTATATCAGATACTTTATCAAAGTAAAATATTCACTACTGCTATGTTTATGATATTATTGTTAAATCACCACCTACGTTCAACTCAATGGTTTTCTCTTTTATTACTCAGTACAGGTATTATCTTAACACAGTTGCCTTCATTANGTCAGTCAACATCGAGCAGTGAATTCCATTCAAATTTGTATGGGTTATTAGCAATTCTATTGGCTTCTGTTACTAGCGGCT]

[+] EMBL CD080599             [CCTCGNAGGCCAAAATTCGGCACGAGGTGTGCTTTAGCTAGGTTGGGGTGCAGTGTGTTAGCTAGTCGCCTACTGGATAAGTATGAAAATAGAGCCTGTTGAGGGAAATATCTTCAAGAGTTTGGATAAAATGTGGCAGTCTTATTTTCTTGACATGTCAAACCTCCTGCCTAATTTTATTGATGCGTGTTTCACGTTCAGTTCAGAATTCGGAGTTATACTCAGCTTCAACAGTTGTTGTATGTAGTGAATTTCTAAAACTTCTATTGTCGACAATTTTGATTTTCTACCAAGAAGGTCAAATTAAACGTAGTATTTCATCAATCTATAATCAAATAATCGTTCAGTATTATGATATGATTCAAATTTTAATTCCTTCAACTCTTTATATTGTACAGAATAATTTACTATATTTTGCCATTTCACATTTGAATGCTGTTTTATATCAGATACTTTATCAAAGTAAAATATTCACTACTGCTATGTTTATGATATTATTGTTAAATCACCACCTACGTTCAACTCAATGGTTTTCTCTTTTATTACTCAGTACAGGTATTATCTTAACACAGTTGCCTTCATTANGTCAGTCAACATCGAGCAGTGAATTCCATTCAAATTTGTATGGGTTATTAGCAATTCTATTGGCTTCTGTTACTAGCGGCT]




>consensus_9362#2
CCTCGNAGGCCAAAATTCGGCACGAGGTGTGCTTTAGCTAGGTTGGGGTGCAGTGTGTTA
GCTAGTCGCCTACTGGATAAGTATGAAAATAGAGCCTGTTGAGGGAAATATCTTCAAGAG
TTTGGATAAAATGTGGCAGTCTTATTTTCTTGACATGTCAAACCTCCTGCCTAATTTTAT
TGATGCGTGTTTCACGTTCAGTTCAGAATTCGGAGTTATACTCAGCTTCAACAGTTGTTG
TATGTAGTGAATTTCTAAAACTTCTATTGTCGACAATTTTGATTTTCTACCAAGAAGGTC
AAATTAAACGTAGTATTTCATCAATCTATAATCAAATAATCGTTCAGTATTATGATATGA
TTCAAATTTTAATTCCTTCAACTCTTTATATTGTACAGAATAATTTACTATATTTTGCCA
TTTCACATTTGAATGCTGTTTTATATCAGATACTTTATCAAAGTAAAATATTCACTACTG
CTATGTTTATGATATTATTGTTAAATCACCACCTACGTTCAACTCAATGGTTTTCTCTTT
TATTACTCAGTACAGGTATTATCTTAACACAGTTGCCTTCATTANGTCAGTCAACATCGA
GCAGTGAATTCCATTCAAATTTGTATGGGTTATTAGCAATTCTATTGGCTTCTGTTACTA
GCGGCT

consensusID : consensus_9362#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 531
fasta sequence

                              [CGAGGCCANAATTCGGCACGAGGTCTCTCTCTGTCTAATCAAAAGGTATCCCCGAATCCCCCCTTTATGTCAGTGCATAGAAATTTCCCTTTATTTTTTTTGGAAATTCATTTGTTCTTCCTATATAGTATGAACTATTACATTTTTTTTTGTATTGTCTTTTTATGCCTAACTCTCTCTTTGATGTTGGNNNGNCNNCNGNNGNGGACGGNNNGGNNNNTNACGCGGAGGGGGGGANNAAACGNAGNANNNNANCAANCGAGAAACAAACAAGCGGGCAGCAGAAGGAGACGAGGCAAACNNNAACNCCCCCAACCCTTCACAGCGGACAGAACAACGGACCACANCGAGCCATCCCACAACAGAACGCCGGGCCATACCAGAAACTCNATCAAAGCAAAATATTCACTACTGCTATGTTTATGATATTATTGCTAAATCACCACCTACGTTCAACTCAATGGTTTTCTCTTTTATTACTCAGTACAGGTATATCTTAACACAGTTGCCTTCATTAGGTCAGTCAACATC]

[+] EMBL CD083156             [CGAGGCCANAATTCGGCACGAGGTCTCTCTCTGTCTAATCAAAAGGTATCCCCGAATCCCCCCTTTATGTCAGTGCATAGAAATTTCCCTTTATTTTTTTTGGAAATTCATTTGTTCTTCCTATATAGTATGAACTATTACATTTTTTTTTGTATTGTCTTTTTATGCCTAACTCTCTCTTTGATGTTGGNNNGNCNNCNGNNGNGGACGGNNNGGNNNNTNACGCGGAGGGGGGGANNAAACGNAGNANNNNANCAANCGAGAAACAAACAAGCGGGCAGCAGAAGGAGACGAGGCAAACNNNAACNCCCCCAACCCTTCACAGCGGACAGAACAACGGACCACANCGAGCCATCCCACAACAGAACGCCGGGCCATACCAGAAACTCNATCAAAGCAAAATATTCACTACTGCTATGTTTATGATATTATTGCTAAATCACCACCTACGTTCAACTCAATGGTTTTCTCTTTTATTACTCAGTACAGGTATATCTTAACACAGTTGCCTTCATTAGGTCAGTCAACATC]




>consensus_9362#3
CGAGGCCANAATTCGGCACGAGGTCTCTCTCTGTCTAATCAAAAGGTATCCCCGAATCCC
CCCTTTATGTCAGTGCATAGAAATTTCCCTTTATTTTTTTTGGAAATTCATTTGTTCTTC
CTATATAGTATGAACTATTACATTTTTTTTTGTATTGTCTTTTTATGCCTAACTCTCTCT
TTGATGTTGGNNNGNCNNCNGNNGNGGACGGNNNGGNNNNTNACGCGGAGGGGGGGANNA
AACGNAGNANNNNANCAANCGAGAAACAAACAAGCGGGCAGCAGAAGGAGACGAGGCAAA
CNNNAACNCCCCCAACCCTTCACAGCGGACAGAACAACGGACCACANCGAGCCATCCCAC
AACAGAACGCCGGGCCATACCAGAAACTCNATCAAAGCAAAATATTCACTACTGCTATGT
TTATGATATTATTGCTAAATCACCACCTACGTTCAACTCAATGGTTTTCTCTTTTATTAC
TCAGTACAGGTATATCTTAACACAGTTGCCTTCATTAGGTCAGTCAACATC

consensusID : consensus_9362#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 496
fasta sequence

                              [ACATATCCCTTCGTACAGAATAATTTACTATATTTTGCCATTTCACATTTGAATGCTGTTTTATATCAGATACTTTATCAAAGTAAAATATTCACTACTGCTATGTTTATGATATTATTGTTAAATCACCACCTACGTTCAACTCAATGGTTTTCTCTTTTATTACTCAGTACAGGTATTATCTTAACACAGGTCAGTCAACATCGAGCAGTGAATTCCATTCAAATTTGTATGGGTTATTAGCAATTCTATTGGCTTCTGTTACTAGCGGCTTTGCTGGTGTTTACCTTGAGAAAATATTTAAAGGAACGTCAACTTCGATCTGGATGCGAAATCTACAGCTAGGTCTCCTCGGTGTGCCAATCGGTCTGTTTGGAGTCTTCATTAATGATGCATCGAAAGTCAAAACTCTGGGTTTTTTTTACGGTTACACACCTATCGTTTGGATTGTAGTTATTCTTCAGGCGTTTGGAGGGCTAGCGATAGCCTTTGTCAT]

[+] EMBL CD084174             [ACATATCCCTTCGTACAGAATAATTTACTATATTTTGCCATTTCACATTTGAATGCTGTTTTATATCAGATACTTTATCAAAGTAAAATATTCACTACTGCTATGTTTATGATATTATTGTTAAATCACCACCTACGTTCAACTCAATGGTTTTCTCTTTTATTACTCAGTACAGGTATTATCTTAACACAGGTCAGTCAACATCGAGCAGTGAATTCCATTCAAATTTGTATGGGTTATTAGCAATTCTATTGGCTTCTGTTACTAGCGGCTTTGCTGGTGTTTACCTTGAGAAAATATTTAAAGGAACGTCAACTTCGATCTGGATGCGAAATCTACAGCTAGGTCTCCTCGGTGTGCCAATCGGTCTGTTTGGAGTCTTCATTAATGATGCATCGAAAGTCAAAACTCTGGGTTTTTTTTACGGTTACACACCTATCGTTTGGATTGTAGTTATTCTTCAGGCGTTTGGAGGGCTAGCGATAGCCTTTGTCAT]




>consensus_9362#4
ACATATCCCTTCGTACAGAATAATTTACTATATTTTGCCATTTCACATTTGAATGCTGTT
TTATATCAGATACTTTATCAAAGTAAAATATTCACTACTGCTATGTTTATGATATTATTG
TTAAATCACCACCTACGTTCAACTCAATGGTTTTCTCTTTTATTACTCAGTACAGGTATT
ATCTTAACACAGGTCAGTCAACATCGAGCAGTGAATTCCATTCAAATTTGTATGGGTTAT
TAGCAATTCTATTGGCTTCTGTTACTAGCGGCTTTGCTGGTGTTTACCTTGAGAAAATAT
TTAAAGGAACGTCAACTTCGATCTGGATGCGAAATCTACAGCTAGGTCTCCTCGGTGTGC
CAATCGGTCTGTTTGGAGTCTTCATTAATGATGCATCGAAAGTCAAAACTCTGGGTTTTT
TTTACGGTTACACACCTATCGTTTGGATTGTAGTTATTCTTCAGGCGTTTGGAGGGCTAG
CGATAGCCTTTGTCAT

consensusID : consensus_9362#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 394
fasta sequence

                              [AGTATTTCATCAATCTATAATCAAATAATCGTTCAGTATAATGATATGATTCAAATTTTAATTCCTTCAACTCTTTATATTGTACAGAATAATTTACTATATTTTGCCATTTCACATTTGAATGCTGTTTTATATCAGATACTTTATCAAAGTAAAATATTCACTACTGCTATGTTTATGATATTATTGTTAAATCACCACCTACGTTCAACTCAATGGTTTTCTCTTTTATTACTCAGTACAGGTATTATCTTAACACAGGTCAGTCAACATCGAGCAGTGAATTCCATTCAATTTGTATGGGTTATTAGCAATTCTATTGGCTTCTGTTACTAGCGGCTTTGCTGGTGTTTACCTTGAGAAAATATTTAAAGGAACGTCAANTTCGATCTGG]

[+] EMBL SMAA18519            [AGTATTTCATCAATCTATAATCAAATAATCGTTCAGTATAATGATATGATTCAAATTTTAATTCCTTCAACTCTTTATATTGTACAGAATAATTTACTATATTTTGCCATTTCACATTTGAATGCTGTTTTATATCAGATACTTTATCAAAGTAAAATATTCACTACTGCTATGTTTATGATATTATTGTTAAATCACCACCTACGTTCAACTCAATGGTTTTCTCTTTTATTACTCAGTACAGGTATTATCTTAACACAGGTCAGTCAACATCGAGCAGTGAATTCCATTCAATTTGTATGGGTTATTAGCAATTCTATTGGCTTCTGTTACTAGCGGCTTTGCTGGTGTTTACCTTGAGAAAATATTTAAAGGAACGTCAANTTCGATCTGG]




>consensus_9362#5
AGTATTTCATCAATCTATAATCAAATAATCGTTCAGTATAATGATATGATTCAAATTTTA
ATTCCTTCAACTCTTTATATTGTACAGAATAATTTACTATATTTTGCCATTTCACATTTG
AATGCTGTTTTATATCAGATACTTTATCAAAGTAAAATATTCACTACTGCTATGTTTATG
ATATTATTGTTAAATCACCACCTACGTTCAACTCAATGGTTTTCTCTTTTATTACTCAGT
ACAGGTATTATCTTAACACAGGTCAGTCAACATCGAGCAGTGAATTCCATTCAATTTGTA
TGGGTTATTAGCAATTCTATTGGCTTCTGTTACTAGCGGCTTTGCTGGTGTTTACCTTGA
GAAAATATTTAAAGGAACGTCAANTTCGATCTGG

consensusID : consensus_9362#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 155
fasta sequence

                              [TAGCTTTGTNCATGAGATATGCTGATAACATTTTAAAAGGTTTCTCTATGGGTCTATCAATGATTCTGTCATCTCTCATATCTTATTTCCTATTTGATGACTTTACTCCAAACATGTATTTATTTGTCGGATCCATATTAGTTGTCAGTGCAACG]

[+] EMBL CD068270             [TAGCTTTGTNCATGAGATATGCTGATAACATTTTAAAAGGTTTCTCTATGGGTCTATCAATGATTCTGTCATCTCTCATATCTTATTTCCTATTTGATGACTTTACTCCAAACATGTATTTATTTGTCGGATCCATATTAGTTGTCAGTGCAACG]




>consensus_9362#6
TAGCTTTGTNCATGAGATATGCTGATAACATTTTAAAAGGTTTCTCTATGGGTCTATCAA
TGATTCTGTCATCTCTCATATCTTATTTCCTATTTGATGACTTTACTCCAAACATGTATT
TATTTGTCGGATCCATATTAGTTGTCAGTGCAACG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9362#1      ------------------------------------------------------------
consensus_9362#5      ------------------------------------------------------------
consensus_9362#2      ------------------------------------------------------------
consensus_9362#3      ------------------------------------------------------------
consensus_9362#4      ------------------------------------------------------------
consensus_9362#0      AAAGATGTAACGTCCTCATATGGTAGTAAATTTGTAAATAATGACTTGATCCATTTGCCA 60
consensus_9362#6      ------------------------------------------------------------
                                                                                  

consensus_9362#1      ------------------------------------------------------------
consensus_9362#5      ------------------------------------------------------------
consensus_9362#2      -----------------------------------------------------------C 1
consensus_9362#3      ------------------------------------------------------------
consensus_9362#4      ------------------------------------------------------------
consensus_9362#0      AGCACATAATTATGTGCGACGGTTAGTGACAATACATCTCTTCCCAAGTCTCATGACCTA 120
consensus_9362#6      ------------------------------------------------------------
                                                                                  

consensus_9362#1      ------------------------------------------------------------
consensus_9362#5      ------------------------------------------------------------
consensus_9362#2      CTCGNAGGCCAAAATTCGGCACGAGGTGTGCTTTAGCTAGGTTGGGGTGCAGTGTGTTAG 61
consensus_9362#3      ------------------------------------------------------------
consensus_9362#4      ------------------------------------------------------------
consensus_9362#0      GGTGTTGGAAACCGACTGTTTGAACCATTAAGCATATTACATACATAATCTTATCATTAT 180
consensus_9362#6      ------------------------------------------------------------
                                                                                  

consensus_9362#1      ---------CCAGNATTCGGCACGAGGGCTGTGCTTTAGCTAG-GAAATATCTTCAAGAG 50
consensus_9362#5      ------------------------------------------------------------
consensus_9362#2      CTAGTCGCCTACTGGATAAGTATGAAAATAGAGCCTGTTGAGG-GAAATATCTTCAAGAG 120
consensus_9362#3      ----CGAGGCCANAATTCGGCACGAGGTCTCTCTCTGTCTAATCAAAAGGTATCCCCGAA 56
consensus_9362#4      ------------------------------------------------------------
consensus_9362#0      AGTCAGAATTAACCATTTGAAACATGTTAACATTCTTTATTGTGAATTATTCTTTCCTTG 240
consensus_9362#6      ------------------------------------------------------------
                                                                                  

consensus_9362#1      TTTGGATAAAATGTGGCAGCCTTATTTTCTTGACATGTCAAACCTCCTGCCTAATTTTAT 110
consensus_9362#5      ------------------------------------------------------------
consensus_9362#2      TTTGGATAAAATGTGGCAGTCTTATTTTCTTGACATGTCAAACCTCCTGCCTAATTTTAT 180
consensus_9362#3      TCCCCCCTTTATGTCAGTGCATAGAAATTTCCCTTTATTTTTTTTGGAAATTCATTTGTT 116
consensus_9362#4      ------------------------------------------------------------
consensus_9362#0      CCATAACTCTTAGTTGCCTTCATTAGGTCAGTCAACATCGAGCAGTGAATTCCATTCAAA 300
consensus_9362#6      ------------------------------------------------------------
                                                                                  

consensus_9362#1      TGATGCGTGTTTCACGTTCAGTTCAGAATTCGGAGTTATACTCAGCTTCAACAGTTGTTG 170
consensus_9362#5      ------------------------------------------------------------
consensus_9362#2      TGATGCGTGTTTCACGTTCAGTTCAGAATTCGGAGTTATACTCAGCTTCAACAGTTGTTG 240
consensus_9362#3      C--TTCCTATATAGTATGAACTATTACATTTTTTTTTGTATTGTCTTTTTATGCCTAACT 174
consensus_9362#4      ------------------------------------------------------------
consensus_9362#0      TTTGTATGGGTTATTAGCAATTCTATTGGCTTCTGTTACTAGCGGCTTTGCTGGTGTTTA 360
consensus_9362#6      ------------------------------------------------------------
                                                                                  

consensus_9362#1      TATGTAGTGA--ATTTCTAAAACTTCTATTGTCGACAATTTTGATTTTCTACCAAGAAGG 228
consensus_9362#5      ------------------------------------------------------------
consensus_9362#2      TATGTAGTGA--ATTTCTAAAACTTCTATTGTCGACAATTTTGATTTTCTACCAAGAAGG 298
consensus_9362#3      CTCTCTTTGAT-GTTGGNNNGNCNNCNGNNGNGGACGGNNN-GGNNNNTNACGCGGAGGG 232
consensus_9362#4      ------------------------------------------------------------
consensus_9362#0      CCTTGAGAAAATATTTAAAGGAACGTCAACTTCGATCTGGATGCGAAATCTACAGCTAGG 420
consensus_9362#6      ------------------------------------------------------------
                                                                                  

consensus_9362#1      TCAAATTAAACGTAGTATTTCATCAATCTATAATCAAATAATCGTTCAGTATAATGATAT 288
consensus_9362#5      -------------AGTATTTCATCAATCTATAATCAAATAATCGTTCAGTATAATGATAT 47
consensus_9362#2      TCAAATTAAACGTAGTATTTCATCAATCTATAATCAAATAATCGTTCAGTATTATGATAT 358
consensus_9362#3      GGGGANNAAACGNAGNANNNNANCAANCGAGAAACAAACAAGCGGGCAGCAGAAGGAGAC 292
consensus_9362#4      ------------------------------------------------------------
consensus_9362#0      TCTCCTCGGTGTGCCAATCGGTCTGTTTGGAGTCTTCATTAATGATGCATCGAAAGTCAA 480
consensus_9362#6      ------------------------------------------------------------
                                                                                  

consensus_9362#1      GATTCAAATTTTAATTCCTTCAACTCTTTATATTGTACAGAATAATTTACTATATTTTGC 348
consensus_9362#5      GATTCAAATTTTAATTCCTTCAACTCTTTATATTGTACAGAATAATTTACTATATTTTGC 107
consensus_9362#2      GATTCAAATTTTAATTCCTTCAACTCTTTATATTGTACAGAATAATTTACTATATTTTGC 418
consensus_9362#3      GAGGCAAACNNNAACNCCCCCAACCCTTCACAGCGGACAGAACAACGGACCACANCGAGC 352
consensus_9362#4      ----------------------ACATATCCCTTCGTACAGAATAATTTACTATATTTTGC 38
consensus_9362#0      AACTCTGGGTTTTTTTTACGGTTACACACCTATCGTTTGGATTGTAGTTATTCTTCAGGC 540
consensus_9362#6      ------------------------------------------------------------
                                                                                  

consensus_9362#1      CATTTCACATTTGA--ATGCTGTTTTATATCAGATACTTTATCAAAGT----AAAATATT 402
consensus_9362#5      CATTTCACATTTGA--ATGCTGTTTTATATCAGATACTTTATCAAAGT----AAAATATT 161
consensus_9362#2      CATTTCACATTTGA--ATGCTGTTTTATATCAGATACTTTATCAAAGT----AAAATATT 472
consensus_9362#3      CATCCCACAACAGA--ACGCCGGGCCATACCAGAAACTCNATCAAAGC----AAAATATT 406
consensus_9362#4      CATTTCACATTTGA--ATGCTGTTTTATATCAGATACTTTATCAAAGT----AAAATATT 92
consensus_9362#0      GTTTGGAGGGCTAGCGATAGCCTTTGTCATGAGATATGCTGATAACATTTTAAAAGGTTT 600
consensus_9362#6      -----------------TAGCTTTGTNCATGAGATATGCTGATAACATTTTAAAAGGTTT 43
                                                  *  *** *       **       ***   **

consensus_9362#1      CACTACTGCTATGTTTATGATATTATTGTTAAATCACCACCTACGTTCAACTCAATGGTT 462
consensus_9362#5      CACTACTGCTATGTTTATGATATTATTGTTAAATCACCACCTACGTTCAACTCAATGGTT 221
consensus_9362#2      CACTACTGCTATGTTTATGATATTATTGTTAAATCACCACCTACGTTCAACTCAATGGTT 532
consensus_9362#3      CACTACTGCTATGTTTATGATATTATTGCTAAATCACCACCTACGTTCAACTCAATGGTT 466
consensus_9362#4      CACTACTGCTATGTTTATGATATTATTGTTAAATCACCACCTACGTTCAACTCAATGGTT 152
consensus_9362#0      CTCTATGGGTCTATCAATGATTCTGTCATCTC-TCATATCTTATTTCCTATTTGATGACT 659
consensus_9362#6      CTCTATGGGTCTATCAATGATTCTGTCATCTC-TCATATCTTATTTCCTATTTGATGACT 102
                      * ***  * * * *  *****  * *       ***   * **  * * * *  ***  *

consensus_9362#1      TTCTCTTTTATTACTCAGTACAGGTATTATCTTAACACAGTTGCCTTCATTAGGTCAGTC 522
consensus_9362#5      TTCTCTTTTATTACTCAGTACAGGTATTATCTTAACACAG-------------GTCAGTC 268
consensus_9362#2      TTCTCTTTTATTACTCAGTACAGGTATTATCTTAACACAGTTGCCTTCATTANGTCAGTC 592
consensus_9362#3      TTCTCTTTTATTACTCAGTACAGGTAT-ATCTTAACACAGTTGCCTTCATTAGGTCAGTC 525
consensus_9362#4      TTCTCTTTTATTACTCAGTACAGGTATTATCTTAACACAG-------------GTCAGTC 199
consensus_9362#0      TTACTCCAAAC------ATGTAAGAGTTAGCACAATATTGTTTTCTCCAGC-CTTTAGT- 711
consensus_9362#6      TTACTCCAAAC------ATGTATTTATTTGTCGGAT-CCATATT----AGT-TGTCAGT- 149
                      **       *        *  *    *       *                   * *** 

consensus_9362#1      AACATCGAGCAGTGAATTCCATTCAAATTTGTATGGGTTATTAGCAATTCTATTGGCTTC 582
consensus_9362#5      AACATCGAGCAGTGAATTCCATTCAA-TTTGTATGGGTTATTAGCAATTCTATTGGCTTC 327
consensus_9362#2      AACATCGAGCAGTGAATTCCATTCAAATTTGTATGGGTTATTAGCAATTCTATTGGCTTC 652
consensus_9362#3      AACATC------------------------------------------------------ 531
consensus_9362#4      AACATCGAGCAGTGAATTCCATTCAAATTTGTATGGGTTATTAGCAATTCTATTGGCTTC 259
consensus_9362#0      -ACGTAGTTGAGTAAACATTTCGTAATGTGGGAGCACCTTAAATACAATTTGTAGGCTAA 770
consensus_9362#6      -GCAACG----------------------------------------------------- 155
                        *                                                         

consensus_9362#1      TGTTACTAGCGGCTNTGCTGGTGTTTACCTTGAGAAAATATTTAAAGGAACGTCAACTTC 642
consensus_9362#5      TGTTACTAGCGGCTTTGCTGGTGTTTACCTTGAGAAAATATTTAAAGGAACGTCAANTTC 387
consensus_9362#2      TGTTACTAGCGGCT---------------------------------------------- 666
consensus_9362#3      ------------------------------------------------------------
consensus_9362#4      TGTTACTAGCGGCTTTGCTGGTGTTTACCTTGAGAAAATATTTAAAGGAACGTCAACTTC 319
consensus_9362#0      GTACATTTCTATTTGTAGTTCTTCTTGTGGTCAATCAATAAAGTTGTTAATCTTTTTTAT 830
consensus_9362#6      ------------------------------------------------------------
                                                                                  

consensus_9362#1      GATCTGGATGCGAAATCTACAGCTAGGTCTCC---------------------------- 674
consensus_9362#5      GATCTGG----------------------------------------------------- 394
consensus_9362#2      ------------------------------------------------------------
consensus_9362#3      ------------------------------------------------------------
consensus_9362#4      GATCTGGATGCGAAATCTACAGCTAGGTCTCCTCGGTGTGCCAATCGGTCTGTTTGGAGT 379
consensus_9362#0      AAAATAAATTTAGCTAACCCGTCTGATCATGAAACGACAAACAACGAAGTATCCTTAGTC 890
consensus_9362#6      ------------------------------------------------------------
                                                                                  

consensus_9362#1      ------------------------------------------------------------
consensus_9362#5      ------------------------------------------------------------
consensus_9362#2      ------------------------------------------------------------
consensus_9362#3      ------------------------------------------------------------
consensus_9362#4      CTTCATTAATGATGCATCGAAAGTCAAAACTCTGGGTTTTTTTTACGGTTACACACCTAT 439
consensus_9362#0      AGTTGTACACATACGAAAGTTTGTTTAAAATACATCCATTTACTAAGAATGTCATAGGTA 950
consensus_9362#6      ------------------------------------------------------------
                                                                                  

consensus_9362#1      ---------------------------------------------------------
consensus_9362#5      ---------------------------------------------------------
consensus_9362#2      ---------------------------------------------------------
consensus_9362#3      ---------------------------------------------------------
consensus_9362#4      CGTTTGGATTGTAGTTATTCTTCAGGCGTTTGGAGGGCTAGCGATAGCCTTTGTCAT 496
consensus_9362#0      TCTAGAATGTATCTTTAATTTGATAAATGTT-------------------------- 981
consensus_9362#6      ---------------------------------------------------------