These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9376#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 956 fasta sequence [ATTCGCATCACAGAAAGGCTATTTTTTGAGGCGAATAAGAAATAATAGAAAATTTTTAATGCACTAGCAAACCTATTACTGTTACCCTTTGTTTTTTGTTTTGGAATTTAACGCCAAACTCCTGGAGAAGCAGAAGCTACATTCATTATATCAGGAGATGTGAGACATGCGGTAGAACGAGTTGAATGATGTTCACCTAATCCACTAATCCATGTTAATTGGATAGGTTGTTGAGGATAAGCATACATTCCAGATTCGATATAATATGGATGATGAAAGTGAGTTGAATCGGTAAAAGTAGTTGAAATTGCTGTGGCTGGCATAGTATGCGTTTGATTTACCGTTGGTAAACAATGAACGCCTTGCATAAGATGTGTTGGATTGGCACGAGAAATTTGAAGAGGTAGAGGACCTGGATTAGAATGAACATGAAATGGTCCGTGATATCCATATAAAATAGGTGAGAGCGGTTCAGCAATTTGTGTTATCACACCATCGTTAGATATAATTGGGATGGAGCGAGGCTGTGAAACCATAACAGAACCGGTGACTGCACTTCGCATGGGTTGTTGTTGAATCCGCATTAGTTCTAAATGTTCAGTTGTTCGATTGACCAAACCAACACCAGAGTGTCCAGAAACTCGTAAGTTATTCAAATGATTATGTACTAGATTAGATGTTGGATTATCGACAAAATTGGCCCAATGGTTAGGAGGGGGACAAACTAGAACTGGAGCGTTTGAAACCGAATCACATTGACCCGATTGTAGTACGTTGGCACCAGGAGGCACTGGATTTGAATTTGAACGTCGAAAAAACCGGTGACCTAATGCTGCAGCAGGACTAATGCGTCGAGCTGGATCGAAAGTAAGCATTCGCAGTACAAACTCCAAGAAGATGCTGTAGTCCATTGGAGTGTGACCAGATTCATGTAAGCGTCGCCCACGTGG-TCCTCC] [+] EMBL CD112353 [ATTCGCATCACAGAAAGGCTATTTTTTGAGGCGAATAAGAAATAATAGAAAATTTTTAATGCACTAGCAAACCTATTACTGTTACCCTTTGTTTTTTGTTTTGGAATTTAACGCCAAACTCCTGGAGAAGCAGAAGCTACATTCATTATATCAGGAGATGTGAGACATGCGGTAGAACGAGTTGAATGATGTTCACCTAATCCACTAATCCATGTTAATTGGATAGGTTGTTGAGGATAAGCATACATTCCAGATTCGATATAATATGGATGATGAAAGTGAGTTGAATCGGTAAAAGTAGTTGAAATTGCTGTGGCTGGCATAGTATGCGTTTGATTTACCGTTGGTAAACAATGAACGCCTTGCATAAGATGTGTTGGATTGGCACGAGAAATTTGAAGAGGTAGAGGACCTGGATTAGAATGAACATGAAATGGTCCGTGATATCCATATAAAA ] [+] EMBL CD161063 [ CACCTAATCCACTAATCCATGTTAATTGGATAGGTTGTTGAGGATAACCATACATTCCAGATTCGATATAATATGGATGATGAAAGTGAATTGAATCGGTAAAAGTAGTTGAAATTGCTGTGGCTGGCATAATATGCGTTTGATTTACCGTTGGTAAACAATGAACGCCTTGCATAAGATGTGTTGGATTGGCACGAGAAATTTGAACAGGTATAGGACCTGGATTATAATGAACATGAAATGGTCCGTGATATCCATATAAAATAGGTGAGAGCGGTTCAACAATTTGTGTTATCACACCATCGTTAGATATAATTGGGATGGAGCGAGGCTGAGAAACCATAACAGAACCGGTGACTGCACTTCGCATGGGTTGTTGTTGAATCCGCATTAATTCTAAATGTTCAGTTGTTCGA ] [-] EMBL CD112358 [ AAGTAGTTGAAATTGCTGTGTCTGGCATAGTATGCGTTTGATTTACCGTTGGTAAACAATGAACGCCTTGCATAAGATGTGTTGGATTGGCACGAGAAATTTGAAGAGGTAGAGGACCTGGATTAGAATGAACATGAAATGGTCCGTGATATCCATATAAAATAGGTGAGAGCGGTTCAGCAATTTGTGTTATCACACCATCGTTAGATATAATTGGGATGGAGCGAGGCTGTGAAACCATAACAGAACCGGTGACTGCACTTCGCATGGGTTGTTGTTGAATCCGCATTAGTTCTAAATGTTCAGTTGTTCGATTGACCAAACCAACACCAGAGTGTCCAGAAACTCGTAAGTTATTCAAATGATTATGTACTAGATTAGATGTTGGATTATCGACAAAATTGGCCCAATGGTTAGGAGGGGGACAAACTAGAACTGGAGCGTTTGAAACCGAATCACATTGACCCGATTGTA ] [+] EMBL CD116864 [ TCAGCAATTTGTGTTATCACACCATCGTTAGATATAATTGGGATGGAGCGAGGCTGTGAAACCATAACAGAACCGGTGACTGCACTTCGCATGGGTTGTTGTTGAATCCGCATTAGTTCTAAATGTTCAGTTGTTCGATTGACCAAACCAACACCAGAGTGTCCAGAAACTCGTAAGTTATTCAAATGATTATGTACTAGATTAGATGTTGGATTATCGACAAAATTGGCCCAATGGTTAGGAGGGGGACAAACTAGAACTGGGGCGTTTGAAACCGAATCACATTGACCCGATTGTAGTACGTTGGCACCAGGAGGCACTGGATTTGAATTTGAACGTCGAAAAAACCGGTGACCTAATGCTGCAGCAGGACTAATGCGTCGAGCTGGATCGAAAGTAAGCATTCGCAGTACAAACTCCAAGAAGATGCTGTAGACCATTGGAGTGTGACCAGATTCATGTAAGCGTCGCCCACGTGG TCC ] [+] EMBL CD117451 [ TCAGCAATTTGTGTTATCACACCATCGTTAGATATAATTGGGATGGAGCGAGGCTGTGAAACCATAACAGAACCGGTGACTGCACTTCGCATGGGTTGTTGTTGAATCCGCATTAGTTCTAAATGTTCAGTTGTTCGATTGACCAAACCAACACCAGAGTGTCCAGAAACTCGTAAGTTATTCAAATGATTATGTACTAGATTAGATGTTGGATTATCGACAAAATTGGCCCAATGGTTAGGAGGGGGACAAACTAGAACTGGAGCGTTTGAAACCGAATCACATTGACCCGATTGTAGTACGTTGGCACCAGGAGGCACTGGATTTGAATTTGAACGTCGAAAAAACCGGTGACCTAATGCTGCAGCAGGACTAATGCGTCGAGCTGGATCGAAAGTAAGCATTCGCAGTACAAACTCCAAGAAGATGCTGTAGTCCATTGGAGTGTGACCAGATTCATGTAAGCGTCGCCCACGTGG TCC ] [+] EMBL CD117697 [ TCAGCAATTTGTGTTATCACACCATCGTTAGATATAATTGGGATGGAGCGAGGCTGTGAAACCATAACAGAACCGGTGACTGCACTTCGCATGGGTTGTTGTTGAATCCGCATTAGTTCTAGATGTTCAGTTGTTCGATTGACCAAACCAACACCAGAGTGTCCAGAAACTCGTAAGTTATTCAAATGATTATGTACTAGATTAGATGTTGGATTATCGACAAAATTGGCCCAATGGTTAGGAGGGGGACAAACTAGAACTGGAGCGTTTGAAACCGAATCACATTGACCCGATTGTAGTACGTTGGCACCAGGAGGCACTGGATTTGAATTTGAACGTCGAAAAAACCGGTGACCTAATGCTGCAGCAGGACTAATGCGTCGAGCTGGATCGAAAGTAAGCATTCGCAGTACAAACTCCAAGAAGATGCTGTAGTCCATTGGAGTGTGACCAGATTCATGTAAGCGTCGCCCACGTGG TCC ] [+] EMBL CD117706 [ TCACCAATTTGTGTTATCACACCATCGTTAGATATAATTGGGATGGAGCGAGGCTGTGAAACCATAACAGAACCGGTGACTGCACTTCGCATGGGTTGTTGTTGAATCCGCATTAGTTCTAAATGTTCAGTTGTTCGATTGACCAAACCAACACCATAGTGTCCAAAAACTCGTAAGTTATTCAAATGATTATGTACTAAATTACATGTTGGATTATCGACAAAATTGGCCCAATGGTTAGGAGGGGGACAAACTATAACTGGAGCGTTTGAAACCGAATCACATTGACCCGATTGTAGTACGTTGGCACCAGGAGGCACTGGATTTGAATTTGAACGTCGAAAAAACCGGTGACCTAATGCTGCAGCAGGACTAATGCGTCGAGCTGGATCGAAAGTAAGCATTCGCAGTACAAACTCCAAGAAGATGCTGTAGTCCATTGGAGTGTGACCAGATTCATGTAAGCGTCGCCCACGTGG TCCTCC] [+] EMBL CD117031 [ TCAGCAATTTGTGTTATCACACCATCGTTAGATATAATTGGGATGGAGCGAGGCTGTGAAACCATAACAGAACCGGTGACTGCACTTCGCATGGGTTGTTGTTGAATCCGCATTAGTTCTAAATGCTCAGTTGTTCGATTGACCAAACCAACACCAGAGTGTCCAGAAACTCGTAAGTTATTCAAATGATTATGTACTAGATTAGATGTTGGATTATCGACAAAATTGGCCCAATGGTTAGGAGGGGGACAAACTAGAACTGGAGCGTTTGAAACCGAATCACATTGACCCGATTGTAGTACGTTGGCACCAGGAGGCACTGGATTTGAATTTGAACGTCGAAAAAACCGGTGACCTAATGCTGCAGCAGGACTAATGCGTCGAGCTGGATCGAAAGTAAGCATTCGCAGTACAAACTCCAAGAAGATGCTGTAGTCCATTGGAGTGTGACCAGATTCATGTAAGCGTCGCCCACGTGGNTCCT ] [+] EMBL CD159125 [ CAAATGATTATGTACTAGATTAGATGTTGGATTATCGACAAAATTGGCCCAATGGTTAGGAGGGGGACAAACTAGAACTGGAGCGTTTGAAACCGAATCACATTGACCCGATTGTAGTACGTTGGCACCAGGAGGCACTGGATTTGAATTTGAACGTCGAAAAAACCGGTGACCTAATGCTGCAGCAGGACTAATGCGTCGAGCTGGATCGAAAGTAAGCATTCGCAGTACAAACTCCAAGAAGATGCTGTAGTCCATTGGAGTGTGACCAGATTCATGTAAGCGT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||