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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9394#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1514 fasta sequence
[CTGGTATACCCTTACGACGAACTTTTTCACGTGATAGTAGGCATTACTGTTTGTGAGTCCTTTTTCTTTTCAACAGGTCGTAAATCATATCCTTCGGTTGCAGAAGCATCATTAGGAGTATGAGAGGCTAGATCAAGGATTTCTTCTTCTTCCTCTTCCGCTTCATTTTGATTGGATGATTCTCCGTCCATATCAACTTTATCAGTAGATGACAATCCTAAAAGTGCTAAACGGACTTCAGCTGGTGGAAGTTTTTTAGGTCTGTGACGATGAATTCGAGGGACAGTGGGGGCAGGTGGTTCTGATTCAGGATCTGAGCTAGCCGCTGTACTAGCCCCACTTGAAGAAAGAGCAAGATATTTGGAAAGTTCATCTCTATTCTCTGTTAAAGTAGTTTTAGGATCAACATCTGAACGGAATTGATCACGTAGCCAGTTTGTTCGATCAGCCGGTGTTTTATCCCAAGTTATACCAATTCGTGTTGAGTGTAAGGCACTTGTTTCAAAGCGAATTGGGGCGTATTTTGTTTTATTGATTTCCCGACATTCACTTACAAGATGAGCATATTCTGGAGGAACTTCAAATTGTTGATCATTATCAACAAAACGTAAATCTAACCGGGAACCGGAACTTTCATATTCAAGACCATCACAAGCCGTATAAATTGCTTCCGCTGTTTCAACACTATCGAATTCAATAATAGCATAGAAATATTTCAGTCGTGCCAACTGATATTCACGAATGCGACGTCGGAGTTTAGATGATGCATTACGCCA-G-CAGATTTTTCATCAACATCTATAGCCATAG-TGAATTCTCTACAGTCAGA-TGTTGTCTTCACTGCATTGTGTATCTGATTCACTTGGACGTAGTTCAATTGGTCCATGAAGAGCTTCATCAGCCATGCGTTTAATGCCAAACTCGGATGGATAGACTGTAACTTTTTCTATATGCCCTCTGGCAGGTAAAAATGATTCTAAGACCATATAAATGGTTTCTGGTTTTGCATTATCCCAATCGAAATGGAGCAGTGCCAATCTATGACTTGTCTGGGTAGCAGGAACGGAATCTTTAGTTAATTCATACCAATCTGCACCTTGTAAGTCTTCAATAGCCTCAAAAACATTAATTTTTTCTTCGTCGTTAGTCGAAGCGCTTGATTCAGTTTCTGAGGCTTCGAGTTCAGAACTTTCATTGCTACTGGAGTCCGATTGTTTTTCTGAACTATCCTTTCGAGTTTTAGATGCTAATTTCTGTTTCACGTATGCTCGTGGATTTTTGAACCAAGGGCGTCCGCGTTTATCTTTGAATGCTGATTCTGGTCCAACATCATCAAAAAGGTCTTTAACAGTCCTCGTCTTTTTAGCACCTTTACGTTTGCCAGGAGCAAGTAGAGGGTCATGAGATATTTCTTCCAAATTTTTATTATTCATTGATTATTCACCATAAAGACTCCAATCCCACCACTTGCTTGGTTGAATCCCTCGTAGCGGTTTATGTCACAGGTTCAAATTACG]
[+] EMBL CD062429 [CTGGTATACCCTTACGACGAACTTTTTCACGTGATAGTAGGCATTACTGTTTGTGAGTCCTTTTTCTTTTCAACAGGTCGTAAATCATATCCTTCGGTTGCAGAAGCATCATTAGGAGTATGAGAGGCTAGATCAAGGATTTCTTCTTCTTCCTCTTCCGCTTCATTTTGATTGGATGATTCTCCGTCCATATCAACTTTATCAGTAGATGACAATCCTAAAAGTGCTAAACGGACTTCAGCTGGTGGAAGTTTTTTAGGTCTGTGACGATGAATTCGAGGGACAGTGGGGGCAGGTGGTTCTGATTCAGGATCTGAGCTAGCCGCTGTACTAGCCCCACTTGAAGAAAGAGCAAGATATTTGGAAAGTTCATCTCTATTCTCTGTTAAAGTAGTTTTAGGATCAACATCTGAACGGAATTGATCACGTAGCCAGTTTGTTCGATCAGCCGGTGTTTTATCCC ]
[+] EMBL CD158609 [ ATTTCTTCTTCTTCCTCTTCCGCTTCATTTTGATTGGATGATTCTCCATCCATATCAACTTTATCAGTAGATGACAATCCTAAAAGTGCTAAACGGACTTCAGCTGGTGGAAGTTTTTTAGGTCTGTGACGATGAATTCGAGGGACAGTGGGGGCAGGTGGTTCTGATTCAGGATCTGAGCTAGCCGCTGTACTAGCCCCACTTGAAGAAAGAGCAAGATATTTGGAAAGTTCATCTCTATTCTCTGTTAAAGTAGTTTTAGGATCAACATCTGAACGGAATTGATCACGTAGCCAGTTTGTTCGATCAGCCGGTGTTTTATCCCAAGTTATACCAATTCGTGTTGAGTGTAAGGCACTTGTTCCAAAGCGAATTGGGGCGTATTTTGTTTTATTGATTTCCCGACATTCACTTACAAGATGAGCATATTCTGGAGGAACTTCAAATTGTCGATCATTATCAACAAAACGTAAATCTAACCGGGAACCGGAACTTT ]
[-] EMBL CD152990 [ AAAGAGCAAGATATGGGGAAAGTTCATCTCTATTCTCTGTTAAAGTAGTTGTAGGATCAACATCTGAACGGAATTGATCACGTAGCCAGTTTGTTCGATCAGCCGGTGTTTTATCCCAAGTTATACCAATTCGTGTTGAGTGTAAGGCACTTGTTTCAAAGCGAATTGGGGCGTATTTTGTTTTATTGATTTCCCGACATTCACTTACAAGATGAGCATATTCTGGAGGAACTTCAAATTGTTGATTATTATCAACAAAACGTAAATCTAACCGGGAACCGGAACTTTCATATTCAAGACCATCACAAGCCGTATAAATTGCTTCCGCTGTTTCAACACTATCGAATTCAATAATAGCATAGAAATATTTCAGTCGTGCCAACTGATATTCACGAATGCGACGTCGGAGTTTAGATGATGCATTACGCCA GCCAGATTTTTCATCAAC ]
[-] EMBL CD110744 [ TTATCCCAAGTTACACCAATTCGTGTTGAGTGTAAGGCACTTGTTTCAAAGCGAATTGGGGCGTATTTTGTTTTATTGATTTCCCGACATTCACTTACAAGATGAGCATATTCTGGAGGAACTTCAAATTGTTGATCATTATCAACAAAACGTAAATCTAACCGGGAACCGGAACTTACATATTCAAGACCATCACAAGCCGTATAAATTGCTTCCGCTGTTTCAACACTATCGAATTCAATAATAGCATAGAAATATT ]
[-] EMBL CD153257 [ AATTCGTGTTGAGTGTAAGGCGCTTGTTTCAAAGCGAATTGGGGCGTATTGTGTTTTATTGATTTGCAGTCACTCGCTTACAAGATGAGCATATTCTGGAGGAACTTCAAATTGTTGATCATTATCAACAAAACGTAAATATAATCGGGAACCGGAACTTTCATATTCAAGACCATCGCAAACCGTATAAACTGATAGCGCTGTGTCACCACTATCGAATTCAATAATAGCATAGAAATATGTCAGTCGTGGTAACTGATATTCACGAATGCGACGTCGGAGTTTAGATGATGCATTACGCCAGG CAGATTTTTCATCAAC ]
[-] EMBL CD114109 [ TTCGCGAATGCGACGTCGGAGTTTAGATGATGCATTACGCCA GCCAGATTTTTCATCGACATCTATAGCCATAGTTGAATTCTCTACAGTCAGATTGTTGTCTTCACTGCATTGTGTATCTGATTCACTTGGACGTAGTTCAATTGGTCCATGAAGAGCTTCATCAGCCATGCGTTTAATGCCAAACTCGGATGGATAGACTGTAACTTTTTCTATATGCCCTCTGGCAGG ]
[-] EMBL CD165109 [ ctAATGCGACGTCGGAGTTTAGATGATGCATTACGTCA G CAGATTTTTCATCAACATCTATAGCCATAG TGAATTCTCTACAGTCAGA TGTCGTTTTCATNGCATTCTGTATCTGATTCACTTGGACGTAGTTCAATTGGTCCATGAAGAGCTTCATCAGCCATGCGTTTAATGCCAAACTCGGATGGATAGATTGTAACTTTTTCAATATGCCCTCTGGCTGGTAAAAATGATTCTAAGACCATATAAATGGTTTCTGGTTTTGCATTATCCCAATCGAAATGGAGCAGTGCCAATCTATGACTTGTCTGGGTAGCAGGAACGGAATCTTTAGTTAATTCATACCAATCTGCACCTTGTAAGTCTTCAATAGCCTCAAAAACATTAATTTTT ]
[+] EMBL CD160941 [ ATTCTAAGACCATATAAATGGTTTCTGGTTTTGCATTATCCCAATCGAAATGGAGCAGTGCCAATCTATGACTTGTCTGGGTAGCAGGAACGGAATCTTTAGTTAATTCATACCAATCTGCACCTTGTAGGTCTTCAATAGCCACAAAAACATTAATTTTTTCTTCGTCGTTAGTCGAAGCGCTTGATTCAGTTTCTGAGGCTTCGAGTTCAGAACTTTCATTGCTACTGGAGTCCGATTGTTTTTCTGAACTATCCTTTCGAGTTTTAGATGCTAATTTCTGTTTCACGTATGCTCGTGGATTTTTGAACCAAGGGCGTCCGCGTTTATCTTTGAATGCTGATTCTGGTCCAACATCATCAAAAAGGTCTTTAACAGTCCTCGTCTTTTTAGCACCTTTACGTTTGCCAGGAGCAAGTAGAGGGTCATGAGATATTTCTTCCAAATTTTTATTATTCATTGATTATTCACCATAAAGACTCCAATCCCACCACTTGCTTGGTTGAATCCCTCGTAGCGGTTTATGTCACAGGTTCAAATTAC ]
[-] EMBL CD161017 [ TTCTAAGACCATATAAATGGTTTCTGGTTNTGCATTATCCCAATCGAAATGGAGCAGTGCCAATCTATGACTTGTCTGGGTAGCAGGAACGGAATCTTTAGTTAATTCATACCAATCTGCACCTTGTAAGTCTTCAATAGCTTCAAAAACATTAATTTTTTCTTCGTCGTTAGTCGAAGCGCTTGATTCAGTTTCTGAGGCTTCGAGTTCAGAACTTTCATTGCTACTGGAGTCCGATTGTTTTTCTGAACTATCCTTTCGAGTTTTAGATGCTAATTTCTGTTTCACGTATGCTCGTGGATTTTTGAACCAAGGGCGTCCGCGTTTATCTTTGAATGCTGATTCTGGTCCAACATCATCAAAAAGGTCTTTAACAGTCCTCGTCTTTTTAGCGCCTTTACGTTTGCCAGGAGCAAGTAGAGGGTCATGAGATATTTCTTCCAAATTTTTATTATTCATTGATTATTCACCATAAAGACTCCAATCCCACCACTTGCTTGGTTGAATCCCTCGTAGCGGTTTATGTCACAGGTTCAAATTACG]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||