cluster # 9415

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Schistosoma mansoni
cluster # 9415 cluster # 9415 Sequences # 9 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9415#0 length = 1057 sequences # 3
consensus_9415#1 length = 936 sequences # 3

consensus_9415#2 length = 625 sequences # 1
consensus_9415#3 length = 617 sequences # 1
consensus_9415#4 length = 474 sequences # 1

consensusID : consensus_9415#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1057
fasta sequence

                              [TTGGGAATTGCCCCGAGGCAAGAATCGGCACGAGGGTTACAGAAACTCACATGAACAGACGTCTTCATGATGCCTTATTTTTATCATATAGACCTTGCATTCTCCATCTGTTGGTCCTGAGTAATATGGTACTCTAAGAAAAGGCTGGAAGTATGCGATACTTAGTTCAACTACCCTAGTCGGTGCGGTTGTAGAGTCTCAAAGATCCTCGATCATTACCGCTTATGTAACTTTCCTGACATGGTCTGGTTTAACAAATGGTCACGATCCAGTATGCAACCCATCTTTAATTATCACAAACAGTACAAGTACACAGGATGGTTCAGTTGTTTTGAAGTTCGATAGGCATATTGCCATCGGTATAATAGTGCTCATTTTCTCTGTCCTTTACTCCACCCTCAGATCTAGTACAAAAACATCAGCTGGAAAGTTCCTTATTTCTGGTACAGAAGATACAACCTTAGCAGAACAATTTTCTGGTACTGATGATGACGATGGACGTGATGGTCAAAAAGTATGGGATAATGAAAAAAATGGTGTGGCTTATAATTATTTTATGTATCATTTTATGATGTTACTAGCTACATTATATGTTATGGTCATGCTTACTAATTGGTTAAAGCCACAAAATGATTTGAAAACACTAGTCAGTAATTCAGCTGGTTTTTGGGTACGTATTGTAAGCAGTTGGGTATGTTTAGGTATTTATGTATGGACATTAATTGCACCAGCTCTATTTCCTGATCGTATATTTTAATCAAACTTGACTTTCAAAAGAATATTGAGATAATTATTTTATTTCAGAATTCAATAAATTTTTTCTTTTTATTTCAAACACATCATCTTTAAGAACATGAAGAGGTCCTTGTTGTATACTTCAATCATCCATATTTATTGACAATCATTGGATTGTTATTCTTATTTATTTTATCCAAATTAATTTGTTTAATCAAGTTTACATTANGTTCTTTTCATAATCATTGATCATTATATATATATATATATATATATATATATATATATATATATATATATATATATATNNGGNNTTGGGGGG]

[+] EMBL CD083773             [TTGGGAATTGCCCCGAGGCAAGAATCGGCACGAGGGTTACAGAAACTCACATGAACAGACGTCTTCATGATGCCTTATTTTTATCATATAGACCTTGCATTCTCCATCTGTTGGTCCTGAGTAATATGGTACTCTAAGAAAAGGCTGGAAGTATGCGATACTTAGTTCAACTACCCTAGTCGGTGCGGTTGTAGAGTCTCAAAGATCCTCGATCATTACCGCTTATGTAACTTTCCTGACATGGTCTGGTTTAACAAATGGTCACGATCCAGTATGCAACCCATCTTTAATTATCACAAACAGTACAAGTACACAGGATGGTTCAGTTGTTTTGAAGTTCGATAGGCATATTGCCATCGGTATAATAGTGCTCATTTTCTCTGTCCTTTACTCCACCCTCAGATCTAGTACAAAAACATCAGCTGGAAAGTTCCTTATTTCTGGTACAGAAGATACAACCTTAGCAGAACAATTTTCTGGTACTGATGATGACGATGGACGTGATGGTCAAAAAGTATGGGATACTGAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD197691             [                                                                                                                                                                                                                                                                                            CTTTAATTATCACAAACAGTACAAGTACACAGGATGGTTCAGTTGTTTTGAAGTTCGATAGGCATATTGCCATCGGTATAATAGTGCTCATTTTCTCTGTCCTTTACTCCACCCTCAGATCTAGTACAAAAACATCAGCTGGAAAGTTCCTTATTTCTGGTACAGAAGATACAACCTTAGCAGAACAATTTTCTGGTACTGATGATGACGATGGACGTGATGGTCAAAAAGTATGGGATAATGAAAAAAATGGTGTGGCTTATAATTATTTTATGTATCATTTTATGATGTTACTAGCTACATTATATGTTATGGTCATGCTTACTAATTGGTTAAAGCCACAAAATGATTTGAAAACACTAGTCAGTAATTCAGCTGGTTTTTGGGTACGTATTGTAAGCAGTTGGGTATGTTTAGG                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD080110             [                                                                                                                                                                                                                                                                                                                                                        GGCATATTGCCATCGGTATAATAGTGCTCATTTTCTCTGTCCTTTACTCCACCCTCAGATCTAGTACAAAAACATCAGCTGGAAAGTTCCTTATTTCTGGTACAGAAGATACAACCTTAGCAGAACAATTTTCTGGTACTGATGATGACGATGGACGTGATGGTCAAAAAGTATGGGATAATGAAAAAAATGGTGTGGCTTATAATTATTTTATGTATCATTTTATGATGTTACTAGCTACATTATATGTTATGGTCATGCTTACTAATTGGTTAAAGCCACAAAATGATTTGAAAACACTAGTCAGTAATTCAGCTGGTTTTTGGGTACGTATTGTAAGCAGTTGGGTATGTTTAGGTATTTATGTATGGACATTAATTGCACCAGCTCTATTTCCTGATCGTATATTTTAATCAAACTTGACTTTCAAAAGAATATTGAGATAATTATTTTATTTCAGAATTCAATAAATTTTTTCTTTTTATTTCAAACACATCATCTTTAAGAACATGAAGAGGTCCTTGTTGTATACTTCAATCATCCATATTTATTGACAATCATTGGATTGTTATTCTTATTTATTTTATCCAAATTAATTTGTTTAATCAAGTTTACATTANGTTCTTTTCATAATCATTGATCATTATATATATATATATATATATATATATATATATATATATATATATATATATATATNNGGNNTTGGGGGG]




>consensus_9415#0
TTGGGAATTGCCCCGAGGCAAGAATCGGCACGAGGGTTACAGAAACTCACATGAACAGAC
GTCTTCATGATGCCTTATTTTTATCATATAGACCTTGCATTCTCCATCTGTTGGTCCTGA
GTAATATGGTACTCTAAGAAAAGGCTGGAAGTATGCGATACTTAGTTCAACTACCCTAGT
CGGTGCGGTTGTAGAGTCTCAAAGATCCTCGATCATTACCGCTTATGTAACTTTCCTGAC
ATGGTCTGGTTTAACAAATGGTCACGATCCAGTATGCAACCCATCTTTAATTATCACAAA
CAGTACAAGTACACAGGATGGTTCAGTTGTTTTGAAGTTCGATAGGCATATTGCCATCGG
TATAATAGTGCTCATTTTCTCTGTCCTTTACTCCACCCTCAGATCTAGTACAAAAACATC
AGCTGGAAAGTTCCTTATTTCTGGTACAGAAGATACAACCTTAGCAGAACAATTTTCTGG
TACTGATGATGACGATGGACGTGATGGTCAAAAAGTATGGGATAATGAAAAAAATGGTGT
GGCTTATAATTATTTTATGTATCATTTTATGATGTTACTAGCTACATTATATGTTATGGT
CATGCTTACTAATTGGTTAAAGCCACAAAATGATTTGAAAACACTAGTCAGTAATTCAGC
TGGTTTTTGGGTACGTATTGTAAGCAGTTGGGTATGTTTAGGTATTTATGTATGGACATT
AATTGCACCAGCTCTATTTCCTGATCGTATATTTTAATCAAACTTGACTTTCAAAAGAAT
ATTGAGATAATTATTTTATTTCAGAATTCAATAAATTTTTTCTTTTTATTTCAAACACAT
CATCTTTAAGAACATGAAGAGGTCCTTGTTGTATACTTCAATCATCCATATTTATTGACA
ATCATTGGATTGTTATTCTTATTTATTTTATCCAAATTAATTTGTTTAATCAAGTTTACA
TTANGTTCTTTTCATAATCATTGATCATTATATATATATATATATATATATATATATATA
TATATATATATATATATATATATNNGGNNTTGGGGGG

consensusID : consensus_9415#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 936
fasta sequence

                              [TTCAGTATTATACTTATTTTTACGATCCTTCTTTCAGTAATCGCTCTAATTCCTGACGTTAGGGATTATCTAACTAAAATTCCTGCGCTTTGTACACCTTTTAAGCTGTTTCCATTCACGGATGAGAAGAAAGCCTCTCTAAATTGTGATGCCATTACTGGTTTTGGGGCTGTTTACCGTATTTGTTTCGCATCAACTATGTTTTATCTTTTATTCTGCGTAATTATGATCCGGGTCCACTCATCCATGGACTGGAGAGCGAAATTACAAAATGGGTTTTGGTTCTTCAAGTATCTTTGTTGGTTTGGTTTATTGATTGGTGCATTCTTCATACCCGTTGAAGGTTTTACAAATTTATGGATGTACGTTGGAATGATTGGGGGGAGTTTGTACATAGTCATACAGTTAATTCTTCTTGTGGATTTTGCTCACACATGGAATGAGAACTGGTTAACACAGTATGAAGAAAGTGGGGAAAAGTGTTATGCATTAGGTCTGATCTTTTTCACTTTTTTCTTTAACTTATTGTCGATCGCTGGGATTATACTCCTGTTTATCTTTTACGCAAGTGCTTCACAATGTGGACTAAATAAGGCTTTAATCAGNCTTAATCTTATTNTCTGCTTCTTCGCATCAGTTATTTCAATTTTACCGAAGGTGCAAGAACATATGCCACAGTCTGGTTTGTTACAGTCCTCGATCATTACCGCTTATGTAACTTTCCTGACATGGTCTGGTTTAACAAATGGTCACGATCCAGTATGCAACCCATCTTTAATTATCACAAACAGTACAAGTACACAGGATGGTTCAGTTGTTTTGAAGTTCGATAGGCATATTGCCATCGGTATAATAGTGCTCATTTTCTCTGTCCTTTATTCCACCCTCAGATCTAGTACAAAAACATCAGCTGGAAAGTTCCTTATTTCTGGTACA]

[+] EMBL CD202963             [TTCAGTATTATACTTATTTTTACGATCCTTCTTTCAGTAATCGCTCTAATTCCTGACGTTAGGGATTATCTAACTAAAATTCCTGCGCTTTGTACACCTTTTAAGCTGTTTCCATTCACGGATGAGAAGAAAGCCTCTCTAAATTGTGATGCCATTACTGGTTTTGGGGCTGTTTACCGTATTTGTTTCGCATCAACTATGTTTTATCTTTTATTCTGCGTAATTATGATCCGGGTCCACTCATCCATGGACTGGAGAGCGAAATTACAAAATGGGTTTTGGTTCTTCAAGTATCTTTGTTGGTTTGGTTTATTGATTGGTGCATTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AW016985             [                                                                                                                                  AAGCCTCTCTAAATTGTGATGCCATTACTGGTTTTGGGGCTGTTTACCGTATTTGTTTCGCATCAACTATGTTTTATCTTTTATTCTGCGTAATTATGATCCGGGTCCACTCATCCATGGACTGGAGAGCGAAATTACAAAATGGGTTTTGGTTCTTCAAGTATCTTTGTTGGTTTGGTTTATTGATTGGTGCATTCTTCATACCCGTTGAAGGTTTTACAAATTTATGGATGTACGTTGGAATGATTGGGGGGAGTTTGTACATAGTCATACAGTTAATTCTTCTTGTGGATTTTGCTCACACATGGAATGAGAACTGGTTAACACAGTATGAAGAAAGTGGGGAAAAGTGTTATGCATTAGGTCTGATCTTTTTCACTTTTTTCTTTAACTTATTGTCGATCGCTGGGATTATACTCCTGTTTATCTTTTACGCAAGTGCTTCACAATGTGGACTAAATAAGGCTTTAATCAGNCTTAATCTTATTNTCTGCTT                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD083775             [                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGAATGAGAACTGGTTAACACAGTATGAAGAAAGTGGGGAAAAGTGTTATGCATTAGGTCTGATCTTTTTCACTTTTTTCTTTAACTTATTGTCGATCGCTGGGATTATACTCCTGTTTATCTTTTACGCAAGTGCTTCACAATGTGGACTAAATAAGGCTTTAATCAGTCTTAATCTTATTTTCTGCTTCTTCGCATCAGTTATTTCAATTTTACCGAAGGTGCAAGAACATATGCCACAGTCTGGTTTGTTACAGTCCTCGATCATTACCGCTTATGTAACTTTCCTGACATGGTCTGGTTTAACAAATGGTCACGATCCAGTATGCAACCCATCTTTAATTATCACAAACAGTACAAGTACACAGGATGGTTCAGTTGTTTTGAAGTTCGATAGGCATATTGCCATCGGTATAATAGTGCTCATTTTCTCTGTCCTTTATTCCACCCTCAGATCTAGTACAAAAACATCAGCTGGAAAGTTCCTTATTTCTGGTACA]




>consensus_9415#1
TTCAGTATTATACTTATTTTTACGATCCTTCTTTCAGTAATCGCTCTAATTCCTGACGTT
AGGGATTATCTAACTAAAATTCCTGCGCTTTGTACACCTTTTAAGCTGTTTCCATTCACG
GATGAGAAGAAAGCCTCTCTAAATTGTGATGCCATTACTGGTTTTGGGGCTGTTTACCGT
ATTTGTTTCGCATCAACTATGTTTTATCTTTTATTCTGCGTAATTATGATCCGGGTCCAC
TCATCCATGGACTGGAGAGCGAAATTACAAAATGGGTTTTGGTTCTTCAAGTATCTTTGT
TGGTTTGGTTTATTGATTGGTGCATTCTTCATACCCGTTGAAGGTTTTACAAATTTATGG
ATGTACGTTGGAATGATTGGGGGGAGTTTGTACATAGTCATACAGTTAATTCTTCTTGTG
GATTTTGCTCACACATGGAATGAGAACTGGTTAACACAGTATGAAGAAAGTGGGGAAAAG
TGTTATGCATTAGGTCTGATCTTTTTCACTTTTTTCTTTAACTTATTGTCGATCGCTGGG
ATTATACTCCTGTTTATCTTTTACGCAAGTGCTTCACAATGTGGACTAAATAAGGCTTTA
ATCAGNCTTAATCTTATTNTCTGCTTCTTCGCATCAGTTATTTCAATTTTACCGAAGGTG
CAAGAACATATGCCACAGTCTGGTTTGTTACAGTCCTCGATCATTACCGCTTATGTAACT
TTCCTGACATGGTCTGGTTTAACAAATGGTCACGATCCAGTATGCAACCCATCTTTAATT
ATCACAAACAGTACAAGTACACAGGATGGTTCAGTTGTTTTGAAGTTCGATAGGCATATT
GCCATCGGTATAATAGTGCTCATTTTCTCTGTCCTTTATTCCACCCTCAGATCTAGTACA
AAAACATCAGCTGGAAAGTTCCTTATTTCTGGTACA

consensusID : consensus_9415#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 625
fasta sequence

                              [ANTGACGNTGGACGTGATGGTCAAAAAGTATGGGATAATGAAAAAAATGGTGTGGCTTATAATTATTTTATGTATCATTTTATGATGTTACTAGCTACATTATATGTTATGGTCATGCTTACTAATTGGTTAAAGCCACAAAATGATTTGAAAACACTAGTCAGTAATTCAGCTGGTTTTTGGGTACGTATTGTAAGCAGTTGGGTATGTTTAGGTATTTATGTATGGACATTAATTGCACCAGCTCTATTTCCTGATCGTATATTTTAATCAAACTTGACTTTCAAAAGAATATTGAGATAATTATTTTATTTCAGAATTCAATAAATTTTTTCTTTTTATTTCAAACACATCATCTTTAAGAAACATGAAGAGGTCCTTGTTGTATACTTCAATCATCCATATTTATTGACAATCATTGGATTGTTATTCTTATTTATTTTATCCAAATTAATTTGTTTAATCAAGTTTACATTAGGTTCTTTTCATAATCATTGATCATTATATATATATATATATATATATATATATATATATATATATATATATATATATACTGGGACTGCGGTCTGTTTAATATGCATTCATAACCATTTTTTTTGTTTTGGCTACTAAATAATATACA]

[+] EMBL CD079476             [ANTGACGNTGGACGTGATGGTCAAAAAGTATGGGATAATGAAAAAAATGGTGTGGCTTATAATTATTTTATGTATCATTTTATGATGTTACTAGCTACATTATATGTTATGGTCATGCTTACTAATTGGTTAAAGCCACAAAATGATTTGAAAACACTAGTCAGTAATTCAGCTGGTTTTTGGGTACGTATTGTAAGCAGTTGGGTATGTTTAGGTATTTATGTATGGACATTAATTGCACCAGCTCTATTTCCTGATCGTATATTTTAATCAAACTTGACTTTCAAAAGAATATTGAGATAATTATTTTATTTCAGAATTCAATAAATTTTTTCTTTTTATTTCAAACACATCATCTTTAAGAAACATGAAGAGGTCCTTGTTGTATACTTCAATCATCCATATTTATTGACAATCATTGGATTGTTATTCTTATTTATTTTATCCAAATTAATTTGTTTAATCAAGTTTACATTAGGTTCTTTTCATAATCATTGATCATTATATATATATATATATATATATATATATATATATATATATATATATATATATACTGGGACTGCGGTCTGTTTAATATGCATTCATAACCATTTTTTTTGTTTTGGCTACTAAATAATATACA]




>consensus_9415#2
ANTGACGNTGGACGTGATGGTCAAAAAGTATGGGATAATGAAAAAAATGGTGTGGCTTAT
AATTATTTTATGTATCATTTTATGATGTTACTAGCTACATTATATGTTATGGTCATGCTT
ACTAATTGGTTAAAGCCACAAAATGATTTGAAAACACTAGTCAGTAATTCAGCTGGTTTT
TGGGTACGTATTGTAAGCAGTTGGGTATGTTTAGGTATTTATGTATGGACATTAATTGCA
CCAGCTCTATTTCCTGATCGTATATTTTAATCAAACTTGACTTTCAAAAGAATATTGAGA
TAATTATTTTATTTCAGAATTCAATAAATTTTTTCTTTTTATTTCAAACACATCATCTTT
AAGAAACATGAAGAGGTCCTTGTTGTATACTTCAATCATCCATATTTATTGACAATCATT
GGATTGTTATTCTTATTTATTTTATCCAAATTAATTTGTTTAATCAAGTTTACATTAGGT
TCTTTTCATAATCATTGATCATTATATATATATATATATATATATATATATATATATATA
TATATATATATATATACTGGGACTGCGGTCTGTTTAATATGCATTCATAACCATTTTTTT
TGTTTTGGCTACTAAATAATATACA

consensusID : consensus_9415#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 617
fasta sequence

                              [TATAATTATTTTATGTATCATTTTATGATGTTACTAGCTACATTATATGTTATGGTCATGCTTACTAATTGGTTAAAGCCACAAAATGATTTGAAAACACTAGTCAGTAATTCAGCTGGTTTTTGGGTACGTATTGTAAGCAGTTGGGTATGTTTAGGTATTTATGTATGGACATTAATTGCACCAGCTCTATTTCCTGATCGTATATTTTAATCAAACTTGACTTTCAAAAGAATATTGAGATAATTATTTTATTTCAGAATTCAATAAATTCTTTCTTTTTATTTCAAACACATCATCTTTAAAAGAAACATGAAGAGGTCCTTGTTGTATACTTCAATCATCCATATTTATTGACAATCATTGGATTGTTATTCTTATTTATTTTATCCAAATTAATTTGTTTAATCAAGTTTACATTAGGTTCTTTTCATAATCATTGATCATTATATATATATATATATATTGGATTGGGTTTGTTTAATATGCATTCATCAGCATTTTTTTTGTTTTGGTTACTTAAATAACTATACAGCCTTGTTCATAAAATTATTTGTTTCCAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA]

[-] EMBL AI975367             [TATAATTATTTTATGTATCATTTTATGATGTTACTAGCTACATTATATGTTATGGTCATGCTTACTAATTGGTTAAAGCCACAAAATGATTTGAAAACACTAGTCAGTAATTCAGCTGGTTTTTGGGTACGTATTGTAAGCAGTTGGGTATGTTTAGGTATTTATGTATGGACATTAATTGCACCAGCTCTATTTCCTGATCGTATATTTTAATCAAACTTGACTTTCAAAAGAATATTGAGATAATTATTTTATTTCAGAATTCAATAAATTCTTTCTTTTTATTTCAAACACATCATCTTTAAAAGAAACATGAAGAGGTCCTTGTTGTATACTTCAATCATCCATATTTATTGACAATCATTGGATTGTTATTCTTATTTATTTTATCCAAATTAATTTGTTTAATCAAGTTTACATTAGGTTCTTTTCATAATCATTGATCATTATATATATATATATATATTGGATTGGGTTTGTTTAATATGCATTCATCAGCATTTTTTTTGTTTTGGTTACTTAAATAACTATACAGCCTTGTTCATAAAATTATTTGTTTCCAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA]




>consensus_9415#3
TATAATTATTTTATGTATCATTTTATGATGTTACTAGCTACATTATATGTTATGGTCATG
CTTACTAATTGGTTAAAGCCACAAAATGATTTGAAAACACTAGTCAGTAATTCAGCTGGT
TTTTGGGTACGTATTGTAAGCAGTTGGGTATGTTTAGGTATTTATGTATGGACATTAATT
GCACCAGCTCTATTTCCTGATCGTATATTTTAATCAAACTTGACTTTCAAAAGAATATTG
AGATAATTATTTTATTTCAGAATTCAATAAATTCTTTCTTTTTATTTCAAACACATCATC
TTTAAAAGAAACATGAAGAGGTCCTTGTTGTATACTTCAATCATCCATATTTATTGACAA
TCATTGGATTGTTATTCTTATTTATTTTATCCAAATTAATTTGTTTAATCAAGTTTACAT
TAGGTTCTTTTCATAATCATTGATCATTATATATATATATATATATTGGATTGGGTTTGT
TTAATATGCATTCATCAGCATTTTTTTTGTTTTGGTTACTTAAATAACTATACAGCCTTG
TTCATAAAATTATTTGTTTCCAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTG
CATTACCGTACTGCGTA

consensusID : consensus_9415#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 474
fasta sequence

                              [GTACGTATTGTAAGCAGTTGGGTATGTTTAGGTATTTATGTATGGACATTAATTGCACCAGCTCTATTTCCTGATCGTATATTTTAATCAAACTTGACTTTCAAAAGAATATTGAGATAATTATTTTATTTCAGAATTCAATAAATTTTTTCTTTTTATTTCAAACACATCATCTTTAAGAAACATGAAGAGGTCCTTGTTGTATACTTCAATCATCCATATTATGNNNCNNNCNCCCGGGGGGGGGGGGCCCTTTTTTTATTTTTATAAAAAAGGGTTTTTNANNGATGATAATCTAGATGTTTTNNNTTTTTCTATTGGTTATATTATTATATAATATAATAATNNNNNNNAATATTNNNAATATATATATATATATATATATATATTGGATTGGGTTTGTTTAATATGCATTCATCAGCATTTGTTTTTGTTTTGGTTACTAAAATAACTATACAGCATTGTTCATAAAAA]

[-] EMBL CD073746             [GTACGTATTGTAAGCAGTTGGGTATGTTTAGGTATTTATGTATGGACATTAATTGCACCAGCTCTATTTCCTGATCGTATATTTTAATCAAACTTGACTTTCAAAAGAATATTGAGATAATTATTTTATTTCAGAATTCAATAAATTTTTTCTTTTTATTTCAAACACATCATCTTTAAGAAACATGAAGAGGTCCTTGTTGTATACTTCAATCATCCATATTATGNNNCNNNCNCCCGGGGGGGGGGGGCCCTTTTTTTATTTTTATAAAAAAGGGTTTTTNANNGATGATAATCTAGATGTTTTNNNTTTTTCTATTGGTTATATTATTATATAATATAATAATNNNNNNNAATATTNNNAATATATATATATATATATATATATATTGGATTGGGTTTGTTTAATATGCATTCATCAGCATTTGTTTTTGTTTTGGTTACTAAAATAACTATACAGCATTGTTCATAAAAA]




>consensus_9415#4
GTACGTATTGTAAGCAGTTGGGTATGTTTAGGTATTTATGTATGGACATTAATTGCACCA
GCTCTATTTCCTGATCGTATATTTTAATCAAACTTGACTTTCAAAAGAATATTGAGATAA
TTATTTTATTTCAGAATTCAATAAATTTTTTCTTTTTATTTCAAACACATCATCTTTAAG
AAACATGAAGAGGTCCTTGTTGTATACTTCAATCATCCATATTATGNNNCNNNCNCCCGG
GGGGGGGGGGCCCTTTTTTTATTTTTATAAAAAAGGGTTTTTNANNGATGATAATCTAGA
TGTTTTNNNTTTTTCTATTGGTTATATTATTATATAATATAATAATNNNNNNNAATATTN
NNAATATATATATATATATATATATATATTGGATTGGGTTTGTTTAATATGCATTCATCA
GCATTTGTTTTTGTTTTGGTTACTAAAATAACTATACAGCATTGTTCATAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9415#3      ------------------------------------------------------------
consensus_9415#4      ------------------------------------------------------------
consensus_9415#2      ------------------------------------------------------------
consensus_9415#0      TTGGGAATTGCCCCGAGGCAAGAATCGGCACGAGGGTTACAGAAACTCACATGAACAGAC 60
consensus_9415#1      ------------------------------------------------------------
                                                                                  

consensus_9415#3      ------------------------------------------------------------
consensus_9415#4      ------------------------------------------------------------
consensus_9415#2      ------------------------------------------------------------
consensus_9415#0      GTCTTCATGATGCCTTATTTTTATCATATAGACCTTGCATTCTCCATCTGTTGGTCCTGA 120
consensus_9415#1      ------------------------------------------------------------
                                                                                  

consensus_9415#3      ------------------------------------------------------------
consensus_9415#4      ------------------------------------------------------------
consensus_9415#2      ------------------------------------------------------------
consensus_9415#0      GTAATATGGTACTCTAAGAAAAGGCTGGAAGTATGCGATACTTAGTTCAACTACCCTAGT 180
consensus_9415#1      ------------------------------------------------------------
                                                                                  

consensus_9415#3      ------------------------------------------------------------
consensus_9415#4      ------------------------------------------------------------
consensus_9415#2      ------------------------------------------------------------
consensus_9415#0      CGGTGCGGTTGTAGAGTCTCAAAGATCCTCGATCATTACCGCTTATGTAACTTTCCTGAC 240
consensus_9415#1      -------------TTCAGTATTATACTTATTTTTACGATCCTTCTTTCAGTAATCGCTCT 47
                                                                                  

consensus_9415#3      ------------------------------------------------------------
consensus_9415#4      ------------------------------------------------------------
consensus_9415#2      ------------------------------------------------------------
consensus_9415#0      ATGGTCTGGTTTAACAAATGGTCACGATCCAGTATGCAACCCATCTTTAATTATCACAAA 300
consensus_9415#1      AATTCCTGACGTTAGGGATTATCTAACTAAAATTCCTGCGCTTTGTACACCTTTTAAGCT 107
                                                                                  

consensus_9415#3      ------------------------------------------------------------
consensus_9415#4      ------------------------------------------------------------
consensus_9415#2      ------------------------------------------------------------
consensus_9415#0      CAGTACAAGTACACAGGATGGTTCAGTTGTTTTGAAGTTCGATAGGCATATTGCCATCGG 360
consensus_9415#1      GTTTCCATTCACGGATGAGAAGAAAGCCTCTCTAAATTGTGATGCCATTACTGGTTTTGG 167
                                                                                  

consensus_9415#3      ------------------------------------------------------------
consensus_9415#4      ------------------------------------------------------------
consensus_9415#2      ------------------------------------------------------------
consensus_9415#0      TATAATAGTGCTCATTTTCTCTGTCCTTTACTCCACCCTCAGATCTAGTACAAAAACATC 420
consensus_9415#1      GGCTGTTTACCGTATTTGTTTCG--CATCAACTATGTTTTATCTTTTATTCTGCGTAATT 225
                                                                                  

consensus_9415#3      ------------------------------------------------------------
consensus_9415#4      ------------------------------------------------------------
consensus_9415#2      ------------------------------------------------------------
consensus_9415#0      AGCTGGAAAGTTCCTTATTTCTGGTACAGAAGATACAACCTTAGCAGAACAATTTTCTGG 480
consensus_9415#1      ATGATCCGGGTCCACTCATCCATGGACTGGAGAGCGAAATTACAAAATGGGTTTTGGTTC 285
                                                                                  

consensus_9415#3      ------------------------------------------------------------
consensus_9415#4      ------------------------------------------------------------
consensus_9415#2      -------ANTGACGNTGGACGTGATGGTCAAAAAGTATGGGATAATGAAAAAAATGGTGT 53
consensus_9415#0      TACTGATGATGACGATGGACGTGATGGTCAAAAAGTATGGGATAATGAAAAAAATGGTGT 540
consensus_9415#1      TTCAAGTATCTTTGTTGGTTTGGTTTATTGATTGG--TGCATTCTTCATACCCGTTGAAG 343
                                                                                  

consensus_9415#3      ----TATAATTATTTT-ATGTATCATTTTATGAT-GTTACTAGCTACATTATA-TGTTAT 53
consensus_9415#4      ------------------------------------------------------------
consensus_9415#2      GGCTTATAATTATTTT-ATGTATCATTTTATGAT-GTTACTAGCTACATTATA-TGTTAT 110
consensus_9415#0      GGCTTATAATTATTTT-ATGTATCATTTTATGAT-GTTACTAGCTACATTATA-TGTTAT 597
consensus_9415#1      GTTTTACAAATTTATGGATGTACGTTGGAATGATTGGGGGGAGTTTGTACATAGTCATAC 403
                                                                                  

consensus_9415#3      GGTCATGCTTACTAATTGGTTAAAGCCACAAAATGATTTGAAAACACTAGTCAGTAATTC 113
consensus_9415#4      ------------------------------------------------------------
consensus_9415#2      GGTCATGCTTACTAATTGGTTAAAGCCACAAAATGATTTGAAAACACTAGTCAGTAATTC 170
consensus_9415#0      GGTCATGCTTACTAATTGGTTAAAGCCACAAAATGATTTGAAAACACTAGTCAGTAATTC 657
consensus_9415#1      AGTTAATTCTTCTTGTGGATTTTGCTCACACA-TGGAATGAGAA--CTGGTTAACACAGT 460
                                                                                  

consensus_9415#3      AGCTGGTTTTTGGGTACGTATTGTAAGCAGTTGGGTATG--TTTAGGTATTTATGTATGG 171
consensus_9415#4      -------------GTACGTATTGTAAGCAGTTGGGTATG--TTTAGGTATTTATGTATGG 45
consensus_9415#2      AGCTGGTTTTTGGGTACGTATTGTAAGCAGTTGGGTATG--TTTAGGTATTTATGTATGG 228
consensus_9415#0      AGCTGGTTTTTGGGTACGTATTGTAAGCAGTTGGGTATG--TTTAGGTATTTATGTATGG 715
consensus_9415#1      ATGAAGAAAGTGGGGAAAAGTGTTATGCA-TTAGGTCTGATCTTTTTCACTTTTTTCTTT 519
                                   * *    *  ** *** ** *** **   **    * ** * * *  

consensus_9415#3      ACATTAATTGCACCAGCTCTATTTCCTGATCGTATATTTTAATCAAACTTGACTTTCAAA 231
consensus_9415#4      ACATTAATTGCACCAGCTCTATTTCCTGATCGTATATTTTAATCAAACTTGACTTTCAAA 105
consensus_9415#2      ACATTAATTGCACCAGCTCTATTTCCTGATCGTATATTTTAATCAAACTTGACTTTCAAA 288
consensus_9415#0      ACATTAATTGCACCAGCTCTATTTCCTGATCGTATATTTTAATCAAACTTGACTTTCAAA 775
consensus_9415#1      AACTTATTGTCGATCGCTGGGATTA-TACTCCTGTTTATCTTTTACGCAAGTGCTTCACA 578
                      *  *** *  *    ***    **  *  ** * * * *   * *  *  *   **** *

consensus_9415#3      AGAATATTGAGATAATTATTTTATTTCAGAATTCAATAAATTCTTT--CTTTTTATTTCA 289
consensus_9415#4      AGAATATTGAGATAATTATTTTATTTCAGAATTCAATAAATTTTTT--CTTTTTATTTCA 163
consensus_9415#2      AGAATATTGAGATAATTATTTTATTTCAGAATTCAATAAATTTTTT--CTTTTTATTTCA 346
consensus_9415#0      AGAATATTGAGATAATTATTTTATTTCAGAATTCAATAAATTTTTT--CTTTTTATTTCA 833
consensus_9415#1      ATGTGGACTAAATAAGGCTTTAA--TCAGNCTTAATCTTATTNTCTGCTTCTTCGCATCA 636
                      *        * ****   *** *  ****  ** *    *** * *   * **    ***

consensus_9415#3      AACACATCATCTTTAAAAGAAACATGAAGAGGTCCTTGTTGTATACTTCAATCATCCATA 349
consensus_9415#4      AACACATCATCTTTAA--GAAACATGAAGAGGTCCTTGTTGTATACTTCAATCATCCATA 221
consensus_9415#2      AACACATCATCTTTAA--GAAACATGAAGAGGTCCTTGTTGTATACTTCAATCATCCATA 404
consensus_9415#0      AACACATCATCTTTAA---GAACATGAAGAGGTCCTTGTTGTATACTTCAATCATCCATA 890
consensus_9415#1      GTTATTTCAATTTTACC--GAAGGTGCAAGAA--CATATGCCACAGTCTGGTTTGTTACA 692
                         *  ***  ****     **  ** *      * * *   * * *    *     * *

consensus_9415#3      TTTATTGACAATCATTGGA---------------TTGTTATTCTTAT------------- 381
consensus_9415#4      TTATGNNNCNNNCNCCCGGGGGGGGGGGGCCCTTTTTTTATTTTTATAAAAAAGGGTTTT 281
consensus_9415#2      TTTATTGACAATCATTGGATTG---------TTATTCTTATTTATTTTATCCAAATTAAT 455
consensus_9415#0      TTTATTGACAATCATTGGATTG---------TTATTCTTATTTATTTTATCCAAATTAAT 941
consensus_9415#1      GTCCTCGATCATTACCGCTT--------------ATGTAACTTTCCTGACATGGTCTGGT 738
                       *                                 * * * *    *             

consensus_9415#3      TTATT-----TTATCCAAATTAATTTGTTTAATCAAGT--TTAC-ATTA----------- 422
consensus_9415#4      TNANNGATGATAATCTAGATGTTTTNNNTTTTTCTATTGGTTAT-ATTATTA-TATAATA 339
consensus_9415#2      TTGTTTAATCAAGTTTACATTAGGTTCTTTTCATAATCATTGATCATTAT-------ATA 508
consensus_9415#0      TTGTTTAATCAAGTTTACATTANGTTCTTTTCATAATCATTGATCATTAT-------ATA 994
consensus_9415#1      TTAACAA---ATGGTCACGATCCAGTATGCAACCCATCTTTAATTATCACAAACAGTACA 795
                      *               *                  *    * *  ** *           

consensus_9415#3      -GGTTCTTTTCATAATCATTGATCAT-----TATATATATATATATATATTGG-ATTG-G 474
consensus_9415#4      TAATAATNNNNNNNAATATTNNNAATATATATATATATATATATATATATTGG-ATTG-G 397
consensus_9415#2      TATATATATATATATATATATAT-ATATATATATATATATATATATATACTGGGACTGCG 567
consensus_9415#0      TATATATATATATATATATATAT-ATATATATATATATATATATATATATNNGGNNTTGG 1053
consensus_9415#1      AGTACACAGGATGGTTCAGTTGTTTTGAAGTTCGATAGGCATATTGCCATCGGTATAATA 855
                                       *       *     *  ***   ****    *   *       

consensus_9415#3      GTTTGTTTAATATGCATTCATCAGCATTT-TTTTTGTTTTGGTTACTTAAATAACTATAC 533
consensus_9415#4      GTTTGTTTAATATGCATTCATCAGCATTTGTTTTTGTTTTGGTTACTAAAATAACTATAC 457
consensus_9415#2      GTCTGTTTAATATGCATTCATAACCATTT-TTTTTGTTTTGGCTACT-AAATAA-TATAC 624
consensus_9415#0      GGGG-------------------------------------------------------- 1057
consensus_9415#1      GTGCTCATTTTCTCTGTCCTTTATTCCACCCTCAGATCTAGTACAAAAACATCAGCTGGA 915
                      *                                                           

consensus_9415#3      AGCCTTGTTCATAAAATTATTTGTTTCCAAAAAAAAAAAAAAAAAAAAAAAACATGCCAT 593
consensus_9415#4      AGCATTGTTCATAAAAA------------------------------------------- 474
consensus_9415#2      A----------------------------------------------------------- 625
consensus_9415#0      ------------------------------------------------------------
consensus_9415#1      AAGTTCCTTATTTCTGGTACA--------------------------------------- 936
                                                                                  

consensus_9415#3      GCAGCTGCATTACCGTACTGCGTA 617
consensus_9415#4      ------------------------
consensus_9415#2      ------------------------
consensus_9415#0      ------------------------
consensus_9415#1      ------------------------