These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9417#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1294 fasta sequence [ATACAACATTAGGGAATGTGAAAGAAATGAATAAGGTACATAATTGGTCTGTACAAATAAGTATAATACATGGGGACAAAGTTGATATGGAACACGAAATCACTGTACACCCGTAATGCGTTAGAACTATGCACATGAGTTGACAATATACATAAAAATACCACTATATCTTAAACATAACTGAGAGAAATTAAAAACATAACAAATAAGTAAAAGCTGTACATAACATACATTAGGAATGAAATATAGAATACTAAGTGGCATGAAATGTACAAATCCAAGTGAAGTATGTAAAGGCACTATAAACTATACTGGATGGTTATTGAGAAGCACTAGACTGGGTTGAAT-AATAATCTAGGGAGTCGAAGTATA-CCTATCTACAATAGTTGTCTCACAAAAAGTATTGCAAACAAAGATTTACAAAGCTACTAGTTCATCCATTTCCGACAATTTGGAGCTCTGCAAAGGCAAGGAATTTTGTCGCTTCTATCTTCTAAGTCAAAATTATAGTCATAACATAACTCTTCACCCTTTTTTATCCGTCTGTTAGTAATTATCACAATATGTGAATGACCACCGAAGTTGACGAACTCAGCGAGGCAGTTTGGTTGGCAGGAATGGTTAATATATCGAGCGAGTCCCCCACAAACAGTCGCATCAATTACTGTATCATCATCAAGACGAAACATATATATGCCTCTGTTATGAGCTTCATAGTTCTTTTCTCTTTTATTGGCTATTTCTAAGCGGATTAACTCACCTACGTATTCAATTACCATAGTTTGTTGTTCCAAATCCCGTGCAGCAAATAAACCTAATCCCTGAATACGCGATCGACCGAGAATAACGTTGGAATTAACTTCTGTCTTTAATTTTCGATACTGTTGAGAACGACTGCTTTGATGCTGTTTTGATGCCGTATCTATATTATACACTCCGTTGCTACAAGTTGTTCCATTGAAACTTGGATGAGATAAACGTCGAACACCCGGTAGACTTGTTCGGTGATTAAATGAAATGGAATATTCGCCAGCATCATGCATACGTTTCACATAAGTTTGCATTTTCGGCTCTGATCGTGCACATCCAGATGGGTTTATGGCTAACGGCATTTCAGATATTAATTCAAGACGTCCGAAATTGAAAACATAATCCCTCAAACCCTCTACACCTGGTAGAGATTCTACGGCTCGAACTATATGAGATTCGTTTAAACCAATAAAATC-TCCCCTCTAAGAAG-TGTGGGAAAAGTTTTACTAATTTATGTTCTTTACAAAGAACCTCATTTCGTGAC] [+] EMBL CD181960 [ATACAACATTAGGGAATGTGAAAGAAATGAATAAGGTACATAATTGGTCTGTACAAATAAGTATAATACATGGGGACAAAGTTGATATGGAACACGAAATCACTGTACACCCGTAATGCGTTAGAACTATGCACATGAGTTGACAATATACATAAAAATACCACTATATCTTAAACATAACTGAGAGAAATTAAAAACATAACAAATAAGTAAAAGCTGTACATAACATACATTAGGAATGAAATATAGAATACTAAGTGGCATGAAATGTACAAATCCAAGTGAAGTATGTAAAGGCACTATAAACTATACTGGATGGTTATTGAGAAGCACTAGACTGNGTTGAAT AATAATCTAGGGAGTCGAAGTATACCCTATCTACATAATTTGTCTCAC AAAAGTATTGCAAACAAAGATTTACNAAGCTACTAGTTCATCCATTTTCGACAATTNGNAGCTCTGCAANNGCAAGGAATTTTGTCGCTT ] [-] EMBL CD126254 [ AGAGAAATTAAAAACATAACAAATAAGTAAAAGCTGTACATAACATACATTAGGAATGAAATATAGAATACTAAGTGGCATGAAATGTACAAATCCAAGTGAAGTATGTAAAGGCACTATAAACTATACTGGATGGTTATTGAGAAGCACTAGACTGGGTTGAAT AATAATCTAGGGAGTCGAAGTATA CCTATCTACAATAGTTGTCTCACAAAAAGTATTGCAAACAAAGATTTACAAAGCTACTAGTTCATCCATTTCCGACAATTTGGAGCTCTGCAAAGGCAAGGAATTTTGTCGCTTCTATCTTCTAAGTCAAAATTATAGTCATAACATAACTCTTCACCCTTTTTTATCCGTCTGTTAGTAATTATCACAATATGTGAATGACCACCGAAGTTGACGAACTCAGCGAGGCAGTTTGGTTGGCAGGAATGGTTAATATATCGAGCGAGTCCCCCACAAACAGTCGCATCAATTACTGTATCATCATCAAGACGAAACATATATATGCCTCTGTTAT AGCTTCATAGTT ] [+] EMBL CD182146 [ GAAGCACTAGACTGGGTTGAAT AATAATCTAGGGAGTCGAAGTATA CCTATCTACAATAGTTGTCTCACAAAAAGTATTGCAAACAAAGATTTACAAAGCTACTAGTTCATCCATTTCCGACAATTTGGAGCTCTGCAAAGGCAAGGAATTTTGTCGCTTCTATCTTCTAAGTCAAAATTATAGTCATAACATAACTCTTCACCCTTTTTTATCCGTCTGTTAGTAATTATCACAATATGTGAATGACCACCGAAGTTGACGAACTCA ] [-] EMBL CD077569 [ GCACTAGACTGGGTTGAATAAATAATCTAGGGAGTCGAAGTATA CCTATCTACAATAGTTGTCTCACAAAAAGTATTGCAAACAAAGATTTACAAAGCTACTAGTTCATCCATTTCCGACAATTTGGAGCTCTGCAAAGGCAAGGAATTTTGTCGCTTCTATCTTCTAAGTCAAAATTAT ] [+] EMBL CD161322 [ CTAGGGAGTCGAAGTATA CCTATCTACAATAGTTGTCTCACAAAAAGTATTGCAAACAAAGATTTACAAAGCTACTAGTTCATCCATTTCCGACAATTTGGAGCTCTGCAAAGGCAAGGAATTTTGTCGCTTCTATCTTCTAAGTCAAAATTATAGTCATAACATAACTCTTCACCCTTTTTTATCCGTCTGTTAGTAATTATCACAATATGTGAATGACCACCGAAGTTGACGAACTCAGCGAGGCAGTTTGGTTGGCAGGAATGGTTAATATATCGAGCGAGTCCCCCACAAACAGTCGCATCAATTACTGTATCATCATCAAGACGAAACATATATA ] [-] EMBL CD078422 [ ACTCAGCGAGGCAGTTTGGTTGGCAGGAATGGTTAATATATCGAGCGAGTCCCCCACAAACAGTCGCATCAATTACTGTATCATCATCAAGACGAAACATATATATGCCTCTGTTATGAGCTTCATAGTTCTTTTCTCTTTTATTGGCTATTTCTAAGCGGATTAACTCACCTACGTATTCAATTACCATAGTTTGTTGTTCCAAATCCCGTGCAGCAAATAAACCTAATCCCTGAATACGCGATCGACCGAGAATAACGTTGGAATTAACTTCTGTCTTTAATTTTCGATACTGTTGAGAACGACTGCTTTGATGCTGTTTTGATGCCGTATCTATATTATACACTCCGTTGCTACAAGTTGTTCCATTGAAACTTGGATGAGATAAACGTCGAACACCCGGTAGACTTGTTCGGTGATTAAATGAAATGGAATATTCGCCAGCATCATGCATACGTTTCACATAAGTTTGCATTTTCGGCTCTGATCGTGCACATCCAGATGGGTTTATGGCTAACGGCATTTCAGATATTAATTCAAGACGTCCGAAATTGAAAACATAATCCCTCAAACCCTCTACACCTGGTAGAGATTCTACGGCTCGAACTATATGAGATTCG ] [+] EMBL CD137617 [ AATATATCGAGCGAGTCCCCCACAAACAGTCGCATCAATTACTGTATCATCATCAAGACGAAACATATATATGCCTCTGTTATGAGCTTCATAGTTCTTTTCTCTTTTATTGGCTATTTCTAAGCGGATTAACTCACCTACGTATTCAATTACCATAGTTTGTTGTTCCAAATCCCGTGCAGCAAATAAACCTAATCCCTGAATACGCGATCGACCGAGAATAACGTTGGAATTAACTTCTGTCTTTAATTTTCGATACTGTTGAGAACGACTGCTTTGATGCTGTTTTGATGCCGTATCTATATTATACACTCCGTTGCTACAAGTTGTTCCATTGAAACTTGGATGAGATAAACGTCGAACACCCGGTAGACTTGTTCGGTGATCAAATGAAATGGAATATTCGCCAGCATCATGCATACGTTTCACATAAGTTTGCATTTTCGGCTCTGATCGTGCACATCCAGATGGGTTTATGGCTAACGGCATTTCAGATATTAATTCAAGACGTCCGAAATTGAAAACATAATCCCTCANACCCTCTACACCTGGTAGAGATTCTACGGCTCGAACTATATGAGATTCGTTTAAACCAATAAAATC TCCCCTCTAAGAAG TGTGGGAAAAGTTTTACTAATTTATGTTCTTTACAAAGAACCTCATTTCGTGA ] [-] EMBL CD158309 [ GATTAACTCACCTACGTATTCAATTACCATAGTGTGTTGTTCCAAATCCCGTGCAGCAAATAAACCTAATCCCTGAATACGCGATCGACCGAGAATAACGTTGGAATTAACTTCTGTCTTTAATTTTCGATACTGTTGAGAACGACTGCTTTGATGCTGTTTTGATGCCGTATCTATATTATACACTCCGTTGCTACAAGTTGTTCCATTGAAACTTGGATGAGATAAACGTCGAACACCCGGTAGACTTGTTCGGTGATTAAATGAAATGGAATATTCGCCAGCATCATGCATACGTTTCACATAAGTTTGCATTTTCGGCTCTGATCGTGCACATCCAGATGGGTTTATGGCTAACGGCATTTCAGATATTAATTCAAGACGTCCGAAATTGAAAACATAATCCCTCAAACCCTCTACACCTGGTAGAGATTCTACGGCTCGAACTATATGAGATTCGTTTAAACCAAATAAATCTTCCCCTCTAAGAAGTTGTGGGAAAAGTTTTACTAATTTATGTTCTTTACAAAGAACCTCAATTCGTGAC] [+] EMBL CD135790 [ CACCTACGTATTCAATTACCATAGTTTGTTGTTCCAAATCCCGTGCAGCAAATAAACCTAATGCCTGAATACTCTATCGACCGAGAATAACGTTGGAATTAACTTCTGTCTTTAATTTTCGATACTGTTGAGAACGACTGCTTTGATGCTGTTTTGATGCCGTAACTATATTATACACTCCGTTGCTACAAGTTGTTCCATTGAAACTTGGATGAGATAAACGTCGAACACCCGGTAGACTTGTTCGGTGATTAAATGAAATGGAATATTCG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||