| These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs : 
 consensusID : consensus_9426#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 922 fasta sequence 
                              [GGACAGCATCGCCGATGAACAAGAAGGGTCTGATGCAGACGTGAAGATGAGGTTTGGCAAAGCAAGGGCAGCATTCCTACAATCGAGGATTACCTGGAATTAAAAACAACCGTCACCCGAGACCGAAGCCATAATCTTCACTATGAACGTCGAGAAATTTCTATTGTGCGTAGTTGATACTTAGAGAACTACTACAACCAAAATGAAAGGTGTACAGGTATTCATAAACAGCTATCTACGCAGCATACTCAATGTTTGTTGACCGCATACTATCAGCAGCAGTGTACTGGGAGAGAGAACAAAGCAGCTTCCAACTGAATAGGGAATCAGGAGAAGACGCTGCAGGTGGATATGTCACATTGCAGAATTCATCAAACTGAATCTCGAGGCAAGCTCTAACTTGGAATTTTGAAGGGAAAAGAAAAAGAGGAAGACCAAGGAACACATTGCGTCGGAAATAGTAAGCAGACATTAAAAGAATGAATGGCAGCTGGAAGGGATTGTCCAGGACGTAGTTCGATTGAGAATGCTAGTTGGCGGCTTATGCTGCCGCACGAGGTTTAACGGGCGTAAGGAAGTTATAATTTTGTATGTGTGATTATTCAAAAAGTCAAAAGAGCTTCTATTTTTTCATAACCAGCCTTTGTATAACTTTTTCAATCTGTGTTAACTTATTGCTACATTCAAATACCTACTATGATTCATATTGATCAATGATTTCATTGCTCTTTGTCTCTAAATTGTCTGCATTTATATACCCCGTTTGTGTGTCTTGTAGCTTTCCTTTCACTCCTGATATGATTGGATCTGCGCTATCTTTATCACTAATTGGTCATTCACAAGTAAGTTGGAAATTAAATCTGTCATCCATTATCTATATGATGGAAGTTCAGTTCAGTTACTTTGTTGAAATTTATCGAGG]
[+] EMBL CD146026             [GGACAGCATCGCCGATGAACAAGAAGGGTCTGATGCAGACGTGAAGATGAGGTTTGGCAAAGCAAGGGCAGCATTCCTACAATCGAGGATTACCTGGAATTAAAAACAACCGTCACCCGAGACCGAAGCCATAATCTTCACTATGAACGTCGAGAAATTTCTATTGTGCGTAGTTGATACTTAGAGAACTACTACAACCAAAATGAAAGGTGTACAGGTATTCATAAACAGCTATCTACGCAGCATACTCAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD133097             [                                                                                                                                 CATAATCTTCACTATGAACGTCGAGAAATTTCTATTGTGCGTAGTTGATACTTAGAGAACTACTACAACCAAAATGAAAGGTGTACAGGTATTCATAAACAGCTATCTACGCAGCATACTCAATGTTTGTTGACCGCATACTATCAGCAGCAGTGTACTGGGAGAGAGAACAAAGCAGCTTCCAACTGAATAGGGAATCAGGAGAAGACGCTGCAGGTGGATATGTCACATTGCAGAATTCATCAAACTGAATCTCGAGGCAAGCTCTAACTTGGAATTTTGAAGGGAAAAGAAAAAGAGGAAGACCAAGGAACACATTGCGTCGGAAATAGTAAGCAGACATTAAAAGAATGAATGGCAGCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD167866             [                                                                                                                                                                                                                                                                                                                                                   CTGCAAGTGGATATGTCACATTGCAGAATTCATCAAATTGAATCTCGAGGCAAGCTCTAACTTGGAATTTTGAAGGGAAAAGAAAAAGAGGAAGACCAAGGAACACATTGCGTCGGAAATAGTAAGCAGACATTAAAAGAATGAATGGCAGCTGGAAGGGATTGTCCAGGACGTAGTTCGATTGAGAATGCTAGTTGGCGGCTTATGCTGCCGCACGAGGTTTAACGGGCGTAAGGAAGTTATAATTTTGTATGTGTGATTATTCAAAAAGTCAAAAGAGCTTCTATTTTTTCATAACCAGCCTTTGTATAACTTTTTCAATCTGTGTTAACTTATTGCTACATTCAAATACCTACTATGATTCATATTGATCAATGATTTCATTGCTCTTTGTCTCTAAATTGTCTGCATTTATATACCCCGTTTGTGTGTCTTGTAGCTTTCCTTTCACTCCTGATATGATTGGATCTGCGCTATCTTTATCACTAATTGGTCATTCACAAGTAAGTTGGAAATTAAATCTGTCATCCATTATCTATATGATGGAAGTTCAGTTCAGTTACTTTGTTGAAATTTATCGAGG]
consensusID : consensus_9426#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 751 fasta sequence 
                              [CAGTCGTTTGGATTCCTGTGTGTGGGGTAATTCGATGACGGACTGTTGCCAGTGGAAATCTCGTACAATAGCTGGAGCGCTTGTTTTCATTCCATCAACAATACACCATCCAGTTTTCCAATTAAAATCTATCACCTCATTAATATCAATATCTTCGTCATTTTCCCCCATAGGATTAACCAGTGTTTCGGCAACCTTTAACAATCCCATATACACTATGAACTCTAGGAACATGAAGAAAGGAAAATAGAGATCTTGTGAATTTGTTCGCGAACTATCGATTATAAACTGACGACCAACAAGTGAGGCTATGAAATAAATGTACACTGCCAATGTGACGACCTGTGTGTAAACCAATGGGATGCAAACAAGCGCTCCAGCTATTGTACGAGATTTCCACTGGCAACAGTCCGTCATCGAATTACCCCACACACAGGAATCCAAACGACTGGCTTCTCGCCCATTTAGAGGATCGACATATAACATAAACTTTCCTTTCACTCCTGATATGATTGGATCTGCGCTATCTTTATCACTAATTGGTCATTCACAAGATTTAACAACTGCGCGTCATTTGACTCGAAATAGTACGATAAATATTCCTACTAGGTTGATCCCAACTGAGAGCGTTGTTCCCAGCGAAACTGATAATACGTCGAGAATGAATGTTTCGGATGATCATACGGCTATGGATACTGGGTTATTAACTGTTACTCCTAATACTCCCGCAGTAAACCGTCTTCTTCATGAA]
[+] EMBL CD125710             [CAGTCGTTTGGATTCCTGTGTGTGGGGTAATTCGATGACGGACTGTTGCCAGTGGAAATCTCGTACAATAGCTGGAGCGCTTGTTTTCATTCCATCAGCAATACACCATCCAGTTTTCCAATTAAAATCTATCACCTCATTAATATCAATATCTTCGTCATTTTCCCCCATAGGATTAACCAGTGTTTCGGCAACCTTTAACAATCCCATATACACTATGAACTCTAGGAACATGAAGAAAGGAAAATAGAGATCTTGTGAATTTGTTCGCGAACTATCGATTATAAACTGACGACCAAACAGTGAGGCTATGAAATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD112131             [                                                                ACAATAGCTGGAGCGCTTGTTTTCATTCCATCAACAATACACCATCCAGTTTTCCAATTAAAATCTATCACCTCATTAATATCAATATCTTCGTCATTTTCCCCCATAGGATTAACCAGTGTTTCGGCAACCTTTAACAATCCCATATACACTATGAACTCTAGGAACATGAAGAAAGGAAAATAGAGATCTTGTGAATTTGTTCGCGAACTATCGATTATAAACTGACGACCAACAAGTGAGGCTATGAAATAAATGTACACTGCCAATGTGACGACCTGTGTGTAAACCAATGGGATGC                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD135467             [                                                                    TAGCTGGAGCGCTTGTTTTCATTCCATCAACAATACACCATCCAGTTTTCCAATTAAAATCTATCACCTCATTAATATCAATATCTTCGTCATTTTCCCCCATAGGATTAACCAGTGTTTCGGCAACCTTTAACAATCCCATATACACTATGAACTCTAGGAACATGAAGAAAGGAAAATAGAGATCTTGTGAATTTGTTCACGAACTATCGATTATAAACTGACGACCAACAAGTGAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD146693             [                                                                                                                                                    ATATTTTCGTCATTTTCCCCAATAGGATTAACCAGTGTTTCGGCAA CTTTAACAATCCCATATACACTATGAACTCTAGGAACATGAAGAAAGGAAAATAGAGATCTTGTGAATTTGTTCGCGAACTATCGATTATAAACTGACGACCAACAAGTGAGGCTATGAAATAAATGTACACTGCCAATGTGACGACCTGTGTGTAAACCAATGGGATGCAAACAAGCGCTCCAGCTATTGTACGAGATTTCCACTGGCAACAGTCCGTCATCGAATTACCCCACACACAGGAATCCAAACGACTGGCTTCTCGCCCATTTAGAGGATCGACATATAACATAAACTTTCCTTTCACTCCTGATATGATTGGATCTGCGCTATCTTTATCACTAATTGGTCATTCACAAGATTTAACAACTGCGCGTCATTTGACTCGAAATAGTACGATAAATATTCCTACTAGGTTGATCCCAACTGAGAGCGTTGTTCCCAGCGAAACTGATAATACGTCGAGAATGAATGTTTCGGATGATCATACGGCTATGGATACTGGGTTATTAACTGTTACTCCTAATACTCCCGCAGTAAACCGTCTTCTTCATGAA]
[+] EMBL CD062595             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGCTTCTCGCCCATTTAGAGGATCGACATATAACATAAACTTTCCTTTCACTCCTGATATGATTGGATCTGCGCTATCTTTATCACTAATTGGTCATTCACAAGATTTAACAACTGCGCGTCATTTGACTCGAAATAGTACGATAAATATTCCTACTAGGTTGATCCCgatggggt                                                                                                                             ]
consensusID : consensus_9426#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 611 fasta sequence 
                              [TCTTTATTTCTGTGGAGAAAATTTAACAGAAAACTAACTTAAATCTACACAACAACGCAACAGTACTTAATACAAGCAGTTAAGATTATTCTAATTGAAAAAATTATATTGCAGATCAAATATGGCCGGATATAGGAAACACCAAAGAGATTGATGCCATGGAAAATGAATATCAACTTGTTAAGGTAAAGTTAGTTTAATTAAATAACGAAAGAATTACACACCAAAAATTAGCTTATTCATTAGATAAATAGAATTGACATTTCCAACATAATTGTTTACATACAGTAGCAAGCAATGTGGTGAATCACGTGGAACAAAATTGTTAAGAAAATAAATTAGCTGATTAATCTACCACTATTGATATTGAAGGGGTACTACAAACTTTTTATATTGCTCTATTTAAATATGAACGCGTTAAACAAACTCACTGAAGAAAAACAAATAAATGATTCACTATTTGCTGATGCTTAGAAGCACAGGCAGATTTTCTAACAAGATGAGTTTACAATATTTCCTTTAACAATCCCATATACACTATGAACTCTAGGAACATGAAGAAAGGATATAGAGATCTTGTGAATTTGNTCGCGAACTATCGATTANTAACT]
[+] EMBL CD129950             [TCTTTATTTCTGTGGAGAAAATTTAACAGAAAACTAACTTAAATCTACACAACAACGCAACAGTACTTAATACAAGCAGTTAAGATTATTCTAATTGAAAAAATTATATTGCAGATCAAATATGGCCGGATATAGGAAACACCAAAGAGATTGATGCCATGGAAAATGAATATCAACTTGTTAAGGTAAAGTTAGTTTAATTAAATAACGAAAGAATTACACACCAAAAATTAGCTTATTCATTAGATAAATAGAATTGACATTTCCAACATAATTGTTTACATACAGTAGCAAGCAATGTGGTGAATCACGTGGAACAAAATTGTTAAGAAAATAAATTAGCTGATTAATCTACCACTATTGATATTGAAGGGGTACTACAAACTTTTTATATTGCTCTATTTAAATATGAACGCGTTAAACAAACTCACTGAAGAAAAACAAATAAATGATTCACTATTTGCTGATGCTTAGAAGCACAGGCAGATTTTCTAACAAGATGAGTTTACAATATTTCCTTTAACAATCCCATATACACTATGAACTCTAGGAACATGAAGAAAGGATATAGAGATCTTGTGAATTTGNTCGCGAACTATCGATTANTAACT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9426#1      ------------------------------------------------------------
consensus_9426#2      ------------------------------------------------------------
consensus_9426#0      GGACAGCATCGCCGATGAACAAGAAGGGTCTGATGCAGACGTGAAGATGAGGTTTGGCAA 60
                                                                                  
consensus_9426#1      ------------------------------------------------------------
consensus_9426#2      ------------------------------------------------------------
consensus_9426#0      AGCAAGGGCAGCATTCCTACAATCGAGGATTACCTGGAATTAAAAACAACCGTCACCCGA 120
                                                                                  
consensus_9426#1      --------CAGTCGTTTGGATTCCTGTGTGTGGGGTAATTCGATGACGGACTGTTGCCAG 52
consensus_9426#2      --------------------------------------------TCTTTATTTCTGT-GG 15
consensus_9426#0      GACCGAAGCCATAATCTTCACTATGAACGTCGAGAAATTTCTATTGTGCGTAGTTGATAC 180
                                                                            **    
consensus_9426#1      T-GGAAATCTCGTACAAT--AGCTGGAGCGCTTGTTTTCATTCCATCAACAATACACCAT 109
consensus_9426#2      A-GAAAATTTAACAGAA---AACTAACTTAAATCTACACAACAACGCAACAGTACTTAAT 71
consensus_9426#0      TTAGAGAACTACTACAACCAAAATGAAAGGTGTACAGGTATTC-ATAAACAGCTATCTAC 239
                          * *  *   * **   *  *        *      *       ****       * 
consensus_9426#1      CCAGTTTTCCAATTAAAATCTATCACCTCATTAATATCAATATCTTCGTCATTTTCCCCC 169
consensus_9426#2      ACAAG----CAGTTAAGAT-TAT--TCTAATTGAAAAAATTATATTG----------CAG 114
consensus_9426#0      GCAGC---ATACTCAATGTTTGTTGACCGCATACTATCAGCAGCAGTGT---ACTGGGAG 293
                       **       * * **  * * *   *    *   *  *  *                  
consensus_9426#1      ATAGGATTAACCAGTGTTTCGGCAACCTTTAACAATCCCATATACACTATGAACTCTAGG 229
consensus_9426#2      ATCAAATATGGCCGGATATAGGAAACACCAAAGAG----ATTGATGCCATGGAA--AATG 168
consensus_9426#0      AGAGAACAAAGCAGCTTCCAACTGAATAGGGAATCAGGAGAAGACGCTGCAGGT---GGA 350
                      *    *     * *  *       *      *           *  *             
consensus_9426#1      AACATGAAGAAAGGAAAATAGAGATCTTGTGAATTTGTTCGCGAACTATCGATTATAAAC 289
consensus_9426#2      AATATCAACTTGTTAAGGTAAAGTTAGT-TTAATTAAATAACGAAAGA---ATTACACAC 224
consensus_9426#0      TATGTCACATTGCAGAATTCATCAAACT--GAATCTCGAGGCAAGCTCTAACTTGGAATT 408
                       *  * *        *  *        *   ***       * *        **  *   
consensus_9426#1      TGACGACCAACAAGTGAGGCTATGAAATA-AATGTACACTGCCAATGTGACGACCTGTGT 348
consensus_9426#2      CAAAAATTAGCTTATTCATTAGATAAATAGAATTGACATTTCCAACATAATTGTTTACAT 284
consensus_9426#0      TTGAAGGGAAAAGAAAAAGAGGAAGACCAAGGAACACATTGCGTCGGAAATAGTAAGCAG 468
                              *                *  *      *** * *       *          
consensus_9426#1      GTAAACCAATGGGATGCAAACAAGCGCTCCAGCTATTGTACGAGATTT---CCACTGGCA 405
consensus_9426#2      A-----CAGTAGCAAGCAATGTGGTGAATCA--CGTGGAACAAAATTG---TTAA----G 330
consensus_9426#0      ACA--TTAAAAGAATGAATGGCAGC-TGGAAGGGATTGTCCAGGACGTAGTTCGATTGAG 525
                             *   * * * *     *      *    * *  *   *               
consensus_9426#1      ACAGTCCGTCATCGAATTACCCCACACACAGGAATCCAAACGACTGGC-----TTCTCGC 460
consensus_9426#2      AAAATAAATTAGCTGATTAATCTACCACTATTGATATTGAAGGGGTAC-----TACAAAC 385
consensus_9426#0      AATGCTAGTTGGCGGCTTATGCTGCCGCACGAGGTTTAACGGGCGTAAGGAAGTTATAAT 585
                      *       *   *   ***  *  *         *      *           *      
consensus_9426#1      CCATTTAGAGGATCGACATATAACATAAACTTTCCTTTCACTCCTGATATGATTGGATCT 520
consensus_9426#2      TTTTTATATTGCTCTATTTA-AATATGAACGCGTTAAACAAACTCACTGAAGAAAAACAA 444
consensus_9426#0      TTTGTATGTGTGATTATTCAAAAAGTCAAAAGAGCTTCTATTTTT-TCATAACCAGCCTT 644
                          *          *   * **  * **          *                    
consensus_9426#1      GCGCTATCTTTATCACTAATTGGTCATTCACAAGATTTAACAACTGCGCGTCAT---TTG 577
consensus_9426#2      A---TAAATGATTCACTATTTGCTGATGCTTAGAA----GCACAGGCAGATTTT---CTA 494
consensus_9426#0      TGTATAACTTTTTCAATCTGTGTTAACTTATTGCTACATTCAAATACCTACTATGATTCA 704
                          **  *   *** *   ** * *              **    *      *      
consensus_9426#1      ACTCGA--AATAGTACGATAAATATTC-CTACTAGGTTGATCCCAACTGAGAGCGTTGTT 634
consensus_9426#2      A--CAA--GATGAGTTTACAA-TATTT-CCTTTAA--CAATCCCA--TATACACTATGAA 544
consensus_9426#0      TATTGATCAATGATTTCATTGCTCTTTGTCTCTAAATTGTCTGCATTTATATACCCCGTT 764
                           *   **      *    * **      **         **  *     *   *  
consensus_9426#1      CCCAGCGAAACTGATAATACGTCGAGAATGAATGT--TTCGGATGATCATACGGCTATGG 692
consensus_9426#2      CTCTAGGAACATGAAGAAA----GGATATAGAGAT--CTTG--TGA--ATTTGNTCGCGA 594
consensus_9426#0      TGTGTGTCTTGTAGCTTTCCTTTCACTCCTGATATGATTGGATCTGCGCTATCTTTATCA 824
                                 *                   *  *   * *        *          
consensus_9426#1      ATACTGGGTTATTAACTGTTACTCCTAATACTCCCGCAGTAAACCGTCTTCTTCATGAA- 751
consensus_9426#2      ACTATCGATTANTAACT------------------------------------------- 611
consensus_9426#0      CTAATTGGTCATTCACAAGTAAGTTGGAAATTAAATCTGTCATCCATTATCTATATGATG 884
                          * * * * * **                                            
consensus_9426#1      --------------------------------------
consensus_9426#2      --------------------------------------
consensus_9426#0      GAAGTTCAGTTCAGTTACTTTGTTGAAATTTATCGAGG 922
                                                            
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||