These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9444#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1188 fasta sequence [GGCACGTCACAATAGTGAACAATGTCGTTCGTCCCCAACTTTCCACCTTCTCTTCTTCAACGCATCAAAAGTGATGACACAGGGGATGAAAAAAAGAGAAGCAAGGATGACTATAGGAAAATGAAGGAACTTGAAGAGGCCAGAAAACTGGCTGTAATGCCTGCAATGAAGGACGAAGAAGGACGGGACATCAATCCTCATATTCCACAGTACATTATGCAAGCTCCATGGTATTATGGTGCCTTGCATCCGACTTTGCGGCATCAACGTATACAAGATGAAAAGAAGCGTGAGGACACCTCTGGCAAAATGAAGGGTTCTAACGCTTTAAATGTTTGGTACAAAAGGGGACTACCCCAAATCAAACAAAAGGTTACGTTCTATCGAGATGGTGCTTGTGAGAATTGTGGGTCCATGTCACACAAGCGAAAAGACTGTCTTGAGCGTCCTCGAAAAGTTGGTGCGAAATATACTGGTCTTGATATTGCTGGAGATGAGTGCCAGCAAGTAACCCTAGATTTGGACTACGAAGGTAAACGTGATAGATGGAATGGATATGATCCGTCGGAACATAAAAGAATATTTGAAGAGTATCAGAGACTCGAGGAAGCAAGAAAAATAGCCAAAGCAAAAAAATTGGAAGAAAAATTAGCTAAGGCAGCAGAAGGAAGTGGTGGGCAGGAAGAACCTGCAGCCTCTGCCGCAAAACCTAGTTTGGATGACGATTTCGATGCCGAAGATGGTGACAAATATGGTGATGAGCTAGATATGCCTGGCCAAAAGTTTGATAGTAAACAACGTCAATCCATCCGTAATTTGCGTATTCGTGAGGATACTGCTAAATACTTGTTCAATTTGGATCCTAACAGTGCCTACTATGACTCCAAAACCCGTGCTATGCGTGGTAATCCTTTCGAAAATAGTGGANAACCTGAATCCGAAGTTCCTTTTGCTGGAGATAATTTTGTTCGTTATGATGGGGATGTTCAGGACATGATTGATCGACAAGTATTTGCTTGGGAGATGCACGACAAGCTGGGTTTGGATGTCCATTTACAAGCAGATCCAACTCGTCTGGAATTGTTAGCTAAAAAGGTGTCTAAAGCTAAATGTGATGTCCAAAATAAAGTACGTGCAGAAATTCTTGAACGTTATGGTGGTCATGAGCATTTGGAATCGATTCCGAAA] [+] EMBL CD098400 [GGCACGTCACAATAGTGAACAATGTCGTTCGTCCCCAACTTTCCACCTTCTCTTCTTCAACGCATCAAAAGTGATGACACAGGGGATGAAAAAAAGAGAAGCAAGGATGACTATAGGAAAATGAAGGAACTTGAAGAGGCCAGAAAACTGGCTGTAATGCCTGCAATGAAGGACGAAGAAGGACGGGACATCAATCCTCATATTCCACAGTACATTATGCAAGCTCCATGGTATTATGGTGCCTTGCATCCGACTTTGCGGCATCAACGTATACAAGATGAAAAGAAGCGTGAGGACACCTCTGGCAAAATGAAGGGTTCTAACGCTTTAAATGTTTGGTACAAAAGGGGACTACCCCAAATCAAACAAAAGGTTACGTTCTATCGAGATGGTGCTTGTGAGAATTGTGGGTCCATGTCACACAAGCGAAAAGACTGTCTTG ] [-] EMBL CD147521 [ AAAGAGAAGCAAGGATGACTATAGGAAAATGAAGGAACTTGAAGAGGCCAGAAAACTGGCTGTAATGCCTGCAATGAAGGACGAAGAAGGACGGGACATCAATCCTCATATTCCACAGTACATTATGCAAGCTCCATGGTATTATGGTGCCTTGCATCCGACTTTGCGGCATCAACGTATACAAGATGAAAAGAAGCGTGAGGACACCTCTGGCAAAATGAAGGGTTCTAACGCTTTAAATGTTTGGTACAAAAGGGGACTACCCCAAATCAAACAAAAGGTTACGTTCTATCGAGATGGTGCTTGTGAGAATTGTGGGTCCATGTCACACAAGCGAAAAGACTGTCTTGAGCGTCCTCGAAAAGTTGGTGCGAA ] [-] EMBL CD147514 [ AAAGAGAAGCAAGGATGACTATAGGAAAATGAAGGAACTTGAAGAGGCCAGAAAACTGGCTGTAATGCCTGCAATGAAGGACGAAGAAGGACGGGACATCAATCCTCATATTCCACAGTACATTATGCAAGCTCCATGGTATTATGGTGCCTTGCATCCGACTTTGCGGCATCAACGTATACAAGATGAAAAGAAGCGTGAGGACACCTCTGGCAAAATGAAGGGTTCTAACGCTTTAAATGTTTGGTACAAAAGGGGACTACCCCAAATCAAACAAAAGGTTACGTTCTATCGAGATGGTGCTTGTGAGAATTGTGGGTCCATGTCACACAAGCGAAAAGACTGTCTTGAGCGTCCTCGAAAAGTTGGTGCGAA ] [+] EMBL CD118032 [ TCCATGGTATTATGGTGCCTTGCATCCGACTTTGCGGCATCAACGTATACAAGATGAAAAGAAGCGTGAGGACACCTCTGGCAAAATGAAGGGTTCTAACGCTTTAAATGTTTGGTACAAAAGGGGACTACCCCAAATCAAACAAAAGGTTACGTTCTATCGAGATGGTGCTTGTGAGAATTGTGGGTCCATGTCACACAAGCGAAAAGACTGTCTTGAGCGTCCTCGAAAAGTTGGTGCGAAATATACTGGTCTTGATATTGCTGGAGATGAGTGCCAGCAAGTAACCCTAGATTTGGACTACGAGGGTAAACGTGATAGATGGAATGGATATGATCCGTCGGAACATAAAAGAATATTT ] [+] EMBL CD114903 [ CTACCCCAAATCAAACAAAAGGTTACGTTCTATCGAGATGGTGCTTGTGAGAATTGTGGGTCCATGTCACACAAGCGAAAAGACTGTCTTGAGCGTCCTCGAAAAGTTGGTGCGAAATATACTGGTCTTGATATTGCTGGAGATGAGTGCCAGCAAGTAACCCTAGATTTGGACTACGAAGGTAAACGTGATAGATGGAATGGATATGATCCGTCGGAGCATAAAAGAATATTTGAAGAGTATCAGAGACTCGAGGAAGCAAGAAAAATAGCCAAAGCAAAAAAATTGGAAGAAAAATTAGCTAAGGCAGCAGAAGGAAGTGGTGGGCAGGAAGAACCTGCAGCCTCTGCCGCAAAACCTAGTTTGGATGACGATTTCGATGCCGAAGATGGTGACAAATATGGTGATGAGCTAGATATGCCTGGCCAAAAGTTTGATAGTAAACAACGTCAATCCATCCGTAATTTGCGTATTCGTGAGGATACTGCTAAATACTTGTTCAATTTGGATCCTAACAGTGCCTACTATGACTCCAAAACCCGTGCTATGCGTGGTAATCCTTTCGAAAATAGTGGANAACCTGAATCCGAAGTTCCTTTTG ] [-] EMBL CD097288 [ TACCCCAAATCAAACAAAAGGTTACGTTCTATCGAGATGGTGCTTGTGAGAATTGTGGGTCCATGTCACACAAGCGAAAAGACTGTCTTGAGCGTCCTCGAAAAGTTGGTGCGAAATATACTGGTCTTGATATTGCTGGAGATGAGTGCCAGCAAGTAACCCTAGATTTGGACTACGAAGGTAAACGTGATAGATGGAATGGATATGATCCGTCGGAACATAAAAGAATATTTGAAGAGTATCAGAGACTCGAGGAAGCAAGAAAAATAGCCAAAGTAAAAAAATTGGAAGAAAAATTAGCTAAGGCAGCAGAAGGAAGTGGTGGGCAGGAAGAACCTGCAGCCTCTGCCGCAAAACCTAGTTTGGATGACGATTTCGATGCCGAAGATGGTGACAAATATGGTGATGAGCT ] [+] EMBL CD153815 [ GTGCTTGTGAGAATTGTGGGTCCATGTCACACAAGCGAAAAGACTGTCTTGAGCGTCCTCGAAAAGTTGGTGCGAAATATACTGGTCTTGATATTGCTGGAGATGAGTGCCAGCAAGTAACCCTAGATTTGGACTACGAAGGTAAACGTGATAGATGGAATGGATATGATCCGTCGGAACATAAAAGAATATTTGAAGAGTATCAGAGACTCGAGGAAGCAAGAAAAATAGCCAAAGCAAAAAAATTGGAAGAAAAATTAGCTAAGGCAGCAGAAGGAGGTGGTGGGCAGGAAGAACCTGCAGCCTCTGCCGCAAAACCTAGTTTGGATGACGATTTCGATGCCGAAGATGGTGACAAATATGGTGATGAGCTAGATATGCCTGGCCAAAAGTTTGATAGTAAACAACGTCAGTCCATCCGTAATTTGCGTATTCGTGAGGATACTGCTAAATACTTGTTCAATTTGGATCCTAACAGTGCCTACTATGACTCCAAAACCCGTGCTATGCGTGGTAATCCTTTCG AAATAGTGGA AACCTGAATCCG AGNTCCTTTTGCTG ] [-] EMBL CD157336 [ TTGTGAGAATTGTGGGTCCATGTCACACAAGCGAAAAGACTGTCTTGAGCGTCCTCGAAAAGTTGGTGCGAAATATACTGGTCTTGATATTGCTGGAGATGAGTGCCAGCAAGTAACCCTAGATTTGGACTACGAAGGTAAACGTGATAGATGGAATGGATATGATCCGTCGGAACATAAAAGAATATTTGAAGAGTACCAGAGACTCGAGGAAGCAAGAAAAATAGCCAAAGCAAAAAAATTGGAAGAAAAATTAGCTAAGGCAGCAGAAGGAAGTGGTGGGCAGGAAGAACCTGCAGCCTCTGCCGCAAAACCTAGTTTGGATGACGATTTCGATGCCGAAGATGGTGAC ] [-] EMBL CD155056 [ CTCGAGGAAGCAAGAAAAATAGCCAAAGCAAAAAAATTGGAAGAAAAATTAGCTAAGGCAGCAGAAGGAAGTGGTGGGCAGGAAGAACCTGCAGCCTCTGCCGCAAAACCTAGTTTGGATGACGATTTCGATGCCGAAGATGGTGACAAATATGGTGATGAGCTAGATATGCCTGGCCAAAAGTTTGATAGTAAACAACGTCAATCCATCCGTAATTTGCGTATTCGTGAGGATACTGCTAAATACTTGTTCAATTTGGATCCTAACAGTGCCTACTATGACTCCAAAACCCGTGCTATGCGTGGTAATCCTTTCGAAAATAGTGGAAAACCTGAATCCGAAGTTCCTTTTGCTGGAGATAATTTTGTTCGTTATGATGGGGATGTTCAGGACATGATTGATCGACAAGTATTTGCTTGGGAGATGCACGACAAGCTGGGTTTGGATGTCCATTTACAAGCAGATCCAACTCGTCTGGAATTGTTAGCTAAAAAGGTGTCTAAAGCTAAATGTGATGTCCAAAATAAAGTACGTGCAGAAATTCTTGAACGTTATGGTGGTCATGAGCATTTGGAATCGATTCCGAAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||