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Schistosoma mansoni
cluster # 9444 cluster # 9444       Sequences # 9       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9444#0 length = 1188 sequences # 9  

consensusID : consensus_9444#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1188
fasta sequence
                              [GGCACGTCACAATAGTGAACAATGTCGTTCGTCCCCAACTTTCCACCTTCTCTTCTTCAACGCATCAAAAGTGATGACACAGGGGATGAAAAAAAGAGAAGCAAGGATGACTATAGGAAAATGAAGGAACTTGAAGAGGCCAGAAAACTGGCTGTAATGCCTGCAATGAAGGACGAAGAAGGACGGGACATCAATCCTCATATTCCACAGTACATTATGCAAGCTCCATGGTATTATGGTGCCTTGCATCCGACTTTGCGGCATCAACGTATACAAGATGAAAAGAAGCGTGAGGACACCTCTGGCAAAATGAAGGGTTCTAACGCTTTAAATGTTTGGTACAAAAGGGGACTACCCCAAATCAAACAAAAGGTTACGTTCTATCGAGATGGTGCTTGTGAGAATTGTGGGTCCATGTCACACAAGCGAAAAGACTGTCTTGAGCGTCCTCGAAAAGTTGGTGCGAAATATACTGGTCTTGATATTGCTGGAGATGAGTGCCAGCAAGTAACCCTAGATTTGGACTACGAAGGTAAACGTGATAGATGGAATGGATATGATCCGTCGGAACATAAAAGAATATTTGAAGAGTATCAGAGACTCGAGGAAGCAAGAAAAATAGCCAAAGCAAAAAAATTGGAAGAAAAATTAGCTAAGGCAGCAGAAGGAAGTGGTGGGCAGGAAGAACCTGCAGCCTCTGCCGCAAAACCTAGTTTGGATGACGATTTCGATGCCGAAGATGGTGACAAATATGGTGATGAGCTAGATATGCCTGGCCAAAAGTTTGATAGTAAACAACGTCAATCCATCCGTAATTTGCGTATTCGTGAGGATACTGCTAAATACTTGTTCAATTTGGATCCTAACAGTGCCTACTATGACTCCAAAACCCGTGCTATGCGTGGTAATCCTTTCGAAAATAGTGGANAACCTGAATCCGAAGTTCCTTTTGCTGGAGATAATTTTGTTCGTTATGATGGGGATGTTCAGGACATGATTGATCGACAAGTATTTGCTTGGGAGATGCACGACAAGCTGGGTTTGGATGTCCATTTACAAGCAGATCCAACTCGTCTGGAATTGTTAGCTAAAAAGGTGTCTAAAGCTAAATGTGATGTCCAAAATAAAGTACGTGCAGAAATTCTTGAACGTTATGGTGGTCATGAGCATTTGGAATCGATTCCGAAA]

[+] EMBL CD098400             [GGCACGTCACAATAGTGAACAATGTCGTTCGTCCCCAACTTTCCACCTTCTCTTCTTCAACGCATCAAAAGTGATGACACAGGGGATGAAAAAAAGAGAAGCAAGGATGACTATAGGAAAATGAAGGAACTTGAAGAGGCCAGAAAACTGGCTGTAATGCCTGCAATGAAGGACGAAGAAGGACGGGACATCAATCCTCATATTCCACAGTACATTATGCAAGCTCCATGGTATTATGGTGCCTTGCATCCGACTTTGCGGCATCAACGTATACAAGATGAAAAGAAGCGTGAGGACACCTCTGGCAAAATGAAGGGTTCTAACGCTTTAAATGTTTGGTACAAAAGGGGACTACCCCAAATCAAACAAAAGGTTACGTTCTATCGAGATGGTGCTTGTGAGAATTGTGGGTCCATGTCACACAAGCGAAAAGACTGTCTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD147521             [                                                                                            AAAGAGAAGCAAGGATGACTATAGGAAAATGAAGGAACTTGAAGAGGCCAGAAAACTGGCTGTAATGCCTGCAATGAAGGACGAAGAAGGACGGGACATCAATCCTCATATTCCACAGTACATTATGCAAGCTCCATGGTATTATGGTGCCTTGCATCCGACTTTGCGGCATCAACGTATACAAGATGAAAAGAAGCGTGAGGACACCTCTGGCAAAATGAAGGGTTCTAACGCTTTAAATGTTTGGTACAAAAGGGGACTACCCCAAATCAAACAAAAGGTTACGTTCTATCGAGATGGTGCTTGTGAGAATTGTGGGTCCATGTCACACAAGCGAAAAGACTGTCTTGAGCGTCCTCGAAAAGTTGGTGCGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD147514             [                                                                                            AAAGAGAAGCAAGGATGACTATAGGAAAATGAAGGAACTTGAAGAGGCCAGAAAACTGGCTGTAATGCCTGCAATGAAGGACGAAGAAGGACGGGACATCAATCCTCATATTCCACAGTACATTATGCAAGCTCCATGGTATTATGGTGCCTTGCATCCGACTTTGCGGCATCAACGTATACAAGATGAAAAGAAGCGTGAGGACACCTCTGGCAAAATGAAGGGTTCTAACGCTTTAAATGTTTGGTACAAAAGGGGACTACCCCAAATCAAACAAAAGGTTACGTTCTATCGAGATGGTGCTTGTGAGAATTGTGGGTCCATGTCACACAAGCGAAAAGACTGTCTTGAGCGTCCTCGAAAAGTTGGTGCGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD118032             [                                                                                                                                                                                                                                TCCATGGTATTATGGTGCCTTGCATCCGACTTTGCGGCATCAACGTATACAAGATGAAAAGAAGCGTGAGGACACCTCTGGCAAAATGAAGGGTTCTAACGCTTTAAATGTTTGGTACAAAAGGGGACTACCCCAAATCAAACAAAAGGTTACGTTCTATCGAGATGGTGCTTGTGAGAATTGTGGGTCCATGTCACACAAGCGAAAAGACTGTCTTGAGCGTCCTCGAAAAGTTGGTGCGAAATATACTGGTCTTGATATTGCTGGAGATGAGTGCCAGCAAGTAACCCTAGATTTGGACTACGAGGGTAAACGTGATAGATGGAATGGATATGATCCGTCGGAACATAAAAGAATATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD114903             [                                                                                                                                                                                                                                                                                                                                                               CTACCCCAAATCAAACAAAAGGTTACGTTCTATCGAGATGGTGCTTGTGAGAATTGTGGGTCCATGTCACACAAGCGAAAAGACTGTCTTGAGCGTCCTCGAAAAGTTGGTGCGAAATATACTGGTCTTGATATTGCTGGAGATGAGTGCCAGCAAGTAACCCTAGATTTGGACTACGAAGGTAAACGTGATAGATGGAATGGATATGATCCGTCGGAGCATAAAAGAATATTTGAAGAGTATCAGAGACTCGAGGAAGCAAGAAAAATAGCCAAAGCAAAAAAATTGGAAGAAAAATTAGCTAAGGCAGCAGAAGGAAGTGGTGGGCAGGAAGAACCTGCAGCCTCTGCCGCAAAACCTAGTTTGGATGACGATTTCGATGCCGAAGATGGTGACAAATATGGTGATGAGCTAGATATGCCTGGCCAAAAGTTTGATAGTAAACAACGTCAATCCATCCGTAATTTGCGTATTCGTGAGGATACTGCTAAATACTTGTTCAATTTGGATCCTAACAGTGCCTACTATGACTCCAAAACCCGTGCTATGCGTGGTAATCCTTTCGAAAATAGTGGANAACCTGAATCCGAAGTTCCTTTTG                                                                                                                                                                                                                                            ]
[-] EMBL CD097288             [                                                                                                                                                                                                                                                                                                                                                                TACCCCAAATCAAACAAAAGGTTACGTTCTATCGAGATGGTGCTTGTGAGAATTGTGGGTCCATGTCACACAAGCGAAAAGACTGTCTTGAGCGTCCTCGAAAAGTTGGTGCGAAATATACTGGTCTTGATATTGCTGGAGATGAGTGCCAGCAAGTAACCCTAGATTTGGACTACGAAGGTAAACGTGATAGATGGAATGGATATGATCCGTCGGAACATAAAAGAATATTTGAAGAGTATCAGAGACTCGAGGAAGCAAGAAAAATAGCCAAAGTAAAAAAATTGGAAGAAAAATTAGCTAAGGCAGCAGAAGGAAGTGGTGGGCAGGAAGAACCTGCAGCCTCTGCCGCAAAACCTAGTTTGGATGACGATTTCGATGCCGAAGATGGTGACAAATATGGTGATGAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD153815             [                                                                                                                                                                                                                                                                                                                                                                                                       GTGCTTGTGAGAATTGTGGGTCCATGTCACACAAGCGAAAAGACTGTCTTGAGCGTCCTCGAAAAGTTGGTGCGAAATATACTGGTCTTGATATTGCTGGAGATGAGTGCCAGCAAGTAACCCTAGATTTGGACTACGAAGGTAAACGTGATAGATGGAATGGATATGATCCGTCGGAACATAAAAGAATATTTGAAGAGTATCAGAGACTCGAGGAAGCAAGAAAAATAGCCAAAGCAAAAAAATTGGAAGAAAAATTAGCTAAGGCAGCAGAAGGAGGTGGTGGGCAGGAAGAACCTGCAGCCTCTGCCGCAAAACCTAGTTTGGATGACGATTTCGATGCCGAAGATGGTGACAAATATGGTGATGAGCTAGATATGCCTGGCCAAAAGTTTGATAGTAAACAACGTCAGTCCATCCGTAATTTGCGTATTCGTGAGGATACTGCTAAATACTTGTTCAATTTGGATCCTAACAGTGCCTACTATGACTCCAAAACCCGTGCTATGCGTGGTAATCCTTTCG AAATAGTGGA AACCTGAATCCG AGNTCCTTTTGCTG                                                                                                                                                                                                                                         ]
[-] EMBL CD157336             [                                                                                                                                                                                                                                                                                                                                                                                                           TTGTGAGAATTGTGGGTCCATGTCACACAAGCGAAAAGACTGTCTTGAGCGTCCTCGAAAAGTTGGTGCGAAATATACTGGTCTTGATATTGCTGGAGATGAGTGCCAGCAAGTAACCCTAGATTTGGACTACGAAGGTAAACGTGATAGATGGAATGGATATGATCCGTCGGAACATAAAAGAATATTTGAAGAGTACCAGAGACTCGAGGAAGCAAGAAAAATAGCCAAAGCAAAAAAATTGGAAGAAAAATTAGCTAAGGCAGCAGAAGGAAGTGGTGGGCAGGAAGAACCTGCAGCCTCTGCCGCAAAACCTAGTTTGGATGACGATTTCGATGCCGAAGATGGTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD155056             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTCGAGGAAGCAAGAAAAATAGCCAAAGCAAAAAAATTGGAAGAAAAATTAGCTAAGGCAGCAGAAGGAAGTGGTGGGCAGGAAGAACCTGCAGCCTCTGCCGCAAAACCTAGTTTGGATGACGATTTCGATGCCGAAGATGGTGACAAATATGGTGATGAGCTAGATATGCCTGGCCAAAAGTTTGATAGTAAACAACGTCAATCCATCCGTAATTTGCGTATTCGTGAGGATACTGCTAAATACTTGTTCAATTTGGATCCTAACAGTGCCTACTATGACTCCAAAACCCGTGCTATGCGTGGTAATCCTTTCGAAAATAGTGGAAAACCTGAATCCGAAGTTCCTTTTGCTGGAGATAATTTTGTTCGTTATGATGGGGATGTTCAGGACATGATTGATCGACAAGTATTTGCTTGGGAGATGCACGACAAGCTGGGTTTGGATGTCCATTTACAAGCAGATCCAACTCGTCTGGAATTGTTAGCTAAAAAGGTGTCTAAAGCTAAATGTGATGTCCAAAATAAAGTACGTGCAGAAATTCTTGAACGTTATGGTGGTCATGAGCATTTGGAATCGATTCCGAAA]


>consensus_9444#0 GGCACGTCACAATAGTGAACAATGTCGTTCGTCCCCAACTTTCCACCTTCTCTTCTTCAA CGCATCAAAAGTGATGACACAGGGGATGAAAAAAAGAGAAGCAAGGATGACTATAGGAAA ATGAAGGAACTTGAAGAGGCCAGAAAACTGGCTGTAATGCCTGCAATGAAGGACGAAGAA GGACGGGACATCAATCCTCATATTCCACAGTACATTATGCAAGCTCCATGGTATTATGGT GCCTTGCATCCGACTTTGCGGCATCAACGTATACAAGATGAAAAGAAGCGTGAGGACACC TCTGGCAAAATGAAGGGTTCTAACGCTTTAAATGTTTGGTACAAAAGGGGACTACCCCAA ATCAAACAAAAGGTTACGTTCTATCGAGATGGTGCTTGTGAGAATTGTGGGTCCATGTCA CACAAGCGAAAAGACTGTCTTGAGCGTCCTCGAAAAGTTGGTGCGAAATATACTGGTCTT GATATTGCTGGAGATGAGTGCCAGCAAGTAACCCTAGATTTGGACTACGAAGGTAAACGT GATAGATGGAATGGATATGATCCGTCGGAACATAAAAGAATATTTGAAGAGTATCAGAGA CTCGAGGAAGCAAGAAAAATAGCCAAAGCAAAAAAATTGGAAGAAAAATTAGCTAAGGCA GCAGAAGGAAGTGGTGGGCAGGAAGAACCTGCAGCCTCTGCCGCAAAACCTAGTTTGGAT GACGATTTCGATGCCGAAGATGGTGACAAATATGGTGATGAGCTAGATATGCCTGGCCAA AAGTTTGATAGTAAACAACGTCAATCCATCCGTAATTTGCGTATTCGTGAGGATACTGCT AAATACTTGTTCAATTTGGATCCTAACAGTGCCTACTATGACTCCAAAACCCGTGCTATG CGTGGTAATCCTTTCGAAAATAGTGGANAACCTGAATCCGAAGTTCCTTTTGCTGGAGAT AATTTTGTTCGTTATGATGGGGATGTTCAGGACATGATTGATCGACAAGTATTTGCTTGG GAGATGCACGACAAGCTGGGTTTGGATGTCCATTTACAAGCAGATCCAACTCGTCTGGAA TTGTTAGCTAAAAAGGTGTCTAAAGCTAAATGTGATGTCCAAAATAAAGTACGTGCAGAA ATTCTTGAACGTTATGGTGGTCATGAGCATTTGGAATCGATTCCGAAA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)