These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9461#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 957 fasta sequence [AGGTATTTGGGATCATAGCACCAAACCGCAAGAAGCTATTTACATTAAAGACGATCGAATTTTTACTACTGGTTTTTCACCAATGAGCGAACGCCAATATGCATTATGGAATAAAGACGACTTTAACGAACCTTTACACATTCAAGAACTGGATACAAGTAATGGTGTAATGTTTCCTTTCTATGATTCAGATACCAATTTGATATATCTTTGTGGAAAAGGTGATAGTACAATCAGATATTTCGAGATTACCGATGAACAACCATATGTACATTATATCAATATGCTTACTAGTTCGGATCCACAACGAGGAATGGGTTGGATGCCGAAACGAGGATTAGATGTAAATCAAAATGAAATTGCTAGATTTTATAAATTACATGCGAAAGGTTTATGTGAAGTTATCCCGTTCACTGTACCTCGGAAATCAGAACTATTCCAAGATGATCTTTATCCAGATACAATTGGTGATATGCCTTCCTTAACAGCTGATGAATGGATGTCCGGTAAAGATGCAGATCCTATTTTAATATCTCTAAAGGAGGGTTATGTTCCAAAGTCGAAACCGAAAAAACGTATTGGGAAGGTAATCGCATCCACTCCAGCAGCAGATAAAGAAGAACAAGATTCAAATTTGACAGTTCCACAAAACAAAGTAACATCGCATCATAATCAACAACCTGGCTCTAAATCGCCAAATACTGAAAATCCTCCCAAAGCTGATCACTTAGATGCAAATCGACAACGATTGACTAAGAGTACTCCACCTAAAGATATTCCATCT-TCTGAAC-CAGTGATTAAATAACTGTACACTTACATCATTCATCAGGCCTACAACAATACCCCCTTTTCATCTTTATTATTATCTGTTATATGCTACCAGTAAGTTTACTAAACACTGTGTAGATCATGTCATATTTTTCGGATTGAACAAAGCAACAATGACAATTAATCTCA] [+] EMBL CD114282 [AGGTATTTGGGATCATAGCACCAAACCGCAAGAAGCTATTTACATTAAAGACGATCGAATTTTTACTACTGGTTTTTCACCAATGAGCGAACGCCAATATGCATTATGGAATAAAGACGACTTTAACGAACCTTTACACATTCAAGAACTGGATACAAGTAATGGTGTAATGTTTCCTTTCTATGATTCAGATACCAATTTGATATATCTTTGTGGAAAAGGTGATAGTACAATCAGATATTTCGAGATTACCGATGAACAACCATATGTACATTATATCAATATGCTTACTAGTTCGGATCCACAACGAGGAATGGGTTGGATGCCGAAACGAGGATTAGATGTAAATCAAAATGAAATTGCTAGATTTTATAAATTACATGCGAAAGGTTTATGTGAAGTTATCCCGTTCACTGTACCTCGGAAATCAGAACTATTCCAAGATGATCTTTATCCAGATACAATTGGTGATATGCCTTCCTTAACAGCTGATGAATGGATGTCCGGTAAAGATGCAGATCCTATTCTAATA ] [-] EMBL CD188292 [ ACATTAAAGACGATCGAATTTTTACTACTGGTTTTTCACCAATGAGCGAACGCCAATATGCATTATGGAATAAAGACGACTTTAACGAACCTTTACACATTCAAGAACTGGATACAAGTAATGGTGTAATGTTTCCTTTCTATGATTCAGATACCAATTTGATATATCTTTGTGGAAAAGGTGATAGTACAATCAGATATTTCGAGATTACCGATGAACAACCATATGTACATTATATCAATATGCTTACTAGTTCGGATCCACAACGAGGAATGGGTTGGATGCCGAAACGAGGATTAGATGTAAATCAAAATGAAATTGCTAGATTTTATAAATTACATGCGAAAGGTTTATGTGAAGTTATCCCGTTCACTGTACCTCGGAAATC ] [+] EMBL CD194707 [ ATTTTTACTACTGGTTTTTCACCAATGAGCGAACGCCAATATGCATTATGGAATAAAGACGACTTTAACGAACCTTTACACATTCAAGAACTGGATACAAGTAATGGTGTAATGTTTCCTTTCTATGATTCAGATACCAATTTGATATATCTTTGTGGAAAAGGTGATAGTACAATCAGATATTTCGAGATTACCGATGAACAACCATATGTACATTATATCAATATGCTTACTAGTTCGGATCCACAACGAGGAATGGGTTGGATGCCGAAACGAGGATTAGATGTAAATCAAAATGAAATTGCTAGATTTTATAAATTACATGCGAAAGGTTTATGTGAAGTTATCCCGTTCACTGTACCCCGGAAATCAGAACTATTCCAAGATGATCTTTATCCAGATACAATTGGTGATATGCCTTCCTTAACAGCTGATGAATGGATGTCCGGTAAAGATGCAGATCCTATTTTAATATCTCTAAAGGAGGGTTATGTTCCAAAGTCGAAACCGAAAAAACGTATTGGGAAGGTAATCGCATCCACTCCAGCAGCAGATAAAGAAGAANCAGAT ] [+] EMBL BF936277 [ AACGCCAATATGCATTATGGAATAAAGACGACTTTAACGAACCTTTACACATTCAAGAACTGGATACAAGTAATGGTGTAATGTTTCCTTTCTATGATTCAGATACCAATTTGATATATCTTTGTGGAAAAGGTGATAGTACAATCAGATATTTCGAGATTACCGATGAACAACCATATGTACATTATATC ] [+] EMBL BF936529 [ ACGCCAATATGCATTATGGAATAAAGACGACTTTAACGAACCTTTACACATTCAAGAACTGGATACAAGTAATGGTGTAATGTTTCCTTTCTATGATTCAGATACCAATTTGATATATCTTTGTGGAAAAGGTGATAGTACAATCAGATATTTCGAGATTACCGATGAACAACCATATGTACATTATATCAATATGCTTACTAGTTCGGATCCACAACGAGGAATGGGTTGGATGCCGAAACGAGGATTAGATGTAAATCAAAATGAAATTGCTAGATTTTATAAATTACATGCGAAAGGTTTATGTGAAGTTATCCCGTTCACTGTACCTCGGAAATCAGAACTATTCCAAGATGATCTTTATCCAGATACAATTGGTGATATGCCTTCCTTAACAGCTGATGAATGGATGTCCGGTAAAGATGCAGATCCTATTTTAATATCTCTAAAGGAGGGTTATGTTCCAAAGTCGAAACCGAAAAAACGTATTGGGAAGGTAATCGCATCCACTCCAGCAGCAGATAAAGAAGAACAAGATTCAAATTTGACAGTTCCACAAAACAAAGTAACATCGCATCATAATCAACAACCTGGCTCTAAATCGCCAAATACTGAAAATCCTTCCAAAACTGATCACTTAGATGCAAATCGACAACGATTGACTAAAAGTACTCCACCTAAAGATATTCCATCT TCTGAAC ] [+] EMBL AI976270 [ ACGCCAATATGCATTATGGAATAAAGACGACTTTAACGAACCTTTACACATTCAAGAACTGGATACAAGTAATGGTGTAATGTTTCCTTTCTATGATTCAGATACCAATTTGATATATCTTTGTGGAAAAGGTGATAGTACAATCAGATATTTCGAGATTACCGATGAACAACCATATGTACATTATATCAATATGCTTACTAGTTCGGATCCACAACGAGGAATGGGTTGGATGCCGAAACGAGGATTAGATGTAAATCAAAATGAAATTGCTAGATTTTATAAATTACATGCGAAAGGTTTATGTGAAGTTATCCCGTTCACTGTACCTCGGAAATCAGAACTATTCCAAGATGATCTTTATCCAGATACAATTGGTGATATGCCTTCCTTAACAGCTGATGAATGGATGTCCGGTAAAGATGCAGATCCTATTCTAATATCTCTAAAGGAGGGTTATGTTCCAAAGTCGAAACCGAAAAAACGTATTGAGAAGGTAATCGCATCCACTCCAGCAGCAGATAAAGAAGAACATGATTCAAATTTGACAGCTCCACAAAACAGAGTAAC ] [-] EMBL CD167317 [ GAACTGGATACAAGTAATGGTGTAATGTTTCCTTTCTATGATTCAGATACCAATTTGATATATCTTTGTGGAAAAGGTGATAGTACAATCAGATATTTCGAGATTACCGATGAACAACCATATGTACATTATATCAATATGCTTACTAGTTCGGATCCACTACGAGGAATGGGTTGGATGCCGAAACGAGGATTAGATGTAAATCAAAATGAAATTGCTAGATTTNATA ] [-] EMBL CD179366 [ CGAGGATTAGATGTAAATCAAAATGAAATTGCTAGATTTTATAAATTACATGCGAAAGGTTTATGTGAAGTTATCCCGTTCACTGTACCTCGGAAATCAGAACTATTCCAAGATGATCTTTATCCAGATACAATTGGTGATATGCCTTCCTTAACAGCTGATGAATGGATGTCCGGTAAAGATGCAGATCCTATTTTAATATCTCTAAAGGAGGGTTATGTTCCAAAGTCGAAACCGAAAAAACGTATTGGGAAGGTAATCGCATCCACTCCAGCAGCAGATAAAGAAGAACAAGATTCAAATTTGACAGTTCCACAAAACAAAGTAACATCGCATCATAATCAACAACCTGGCTCTAAATCGCCAAATACTGAAAATCCTCCCAAAGCTGATCACTTAGATGCAAATCGACAACGATTGACTAAGAGTACTCCACCTAAAGATATTCCATCT TCTGAAC CAGTGA ] [-] EMBL CD164193 [ GATGCAGATCCTATTTTAATATCTCTAAAGGAGGGTTATGTTCCAAAGTCGAAACCGAAAAAACGTATTGGGAAGGTAATCGCATCCACTCCAGCAGCAGATAAAGAAGAACAAGATTCAAATTTGACAGTTCCACAAAACAAAGTAACATCGCATCATAATCAACAACCTGGCTCTAAATCGCCAAATACTGAAAATCCTCCCAAAGCTGATCGCTTAGATGCAAATCGACAACGATTGACTAAGAGTACTCCACCTAAAGATATTCCATGTCTGTTAGCTCA ATTAAATAACTGTACACTTACATCATTCATCAGGCCTACAACAATACCCCCTTTTCATCTTTATTATTATCTGTTATATGCTACCAGTAAGTTTACTAAACACTGTGTAGATCATGTCATATTTTTCGGATTGAACAAAGCAACAATGACAATTAATCTCA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||