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Schistosoma mansoni
cluster # 9462 cluster # 9462       Sequences # 9       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9462#0 length = 835 sequences # 5  
consensus_9462#1 length = 721 sequences # 1  
consensus_9462#2 length = 576 sequences # 1  
consensus_9462#3 length = 565 sequences # 1  
consensus_9462#4 length = 320 sequences # 1  

consensusID : consensus_9462#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 835
fasta sequence
                              [CCT-CGAGGCCAAAAATTCGGCACGAGGGACGATGTCACTTTTACTATTAAACCCGGTGAATGTGTTGGAATTGTTGGCCGCACAGGATCTGGTAAAAGTAGTCTCATCAAAGTATTATTACGTCTGGTTGACCACCTCCCTGGACCTTATACAAACCAATATGTAGCCAATCAAACGGGATTTATAGGTGCCACCGGTCAGGTATTTGTCGATGGAATAGACGTTCGCACTGTTCCTCTCACCTTACTTCGTTCTCGAATTCTAACTATTTGCCAGGAACCATTTCTCTTTTCTGGGTGTTTACGAGATAATCTAGATCCTGAGAATAAACTAAATGATTCTGTATTAGAAGAAGTTTTATTGAAATGTCAACTGGCTACAAGTCGTTTACAAGCCTCTCAGTGGTTACTTCGTGAAGTTGGTGAATCTGGACGAGATATATCTGCCGGGCAAAGGCAATTGATTTGTTTAGCTCGAGCTTTACTTCGTCAACCTAGGCCAAAAATCATTTGTTTAGATGAAGCCACTGCTTCAGTAGACAATAAATGTGAAGAAACTATTCATCAAGTCCTTGACCAAGAATTTCAAGGAGCCACAATATTACTCATAGCCCACCGACTTGCATCAGTTCGTCGTTTATGCTCACGTGTCATAGTCATGCAGTCTGGACGATTAATTGCAGAAGGTCCGCCAAACGAAACTTTAGATACTGTATTCAATCATGTCGAAACCAGAGATCTGGTC-CACTAT-AACAGTGACATT-ATTTATAGATCTGATTTG-TAGCT-ACTGAATTATGCATTA-TATTTTA-TA-TTTTAAT-ATATGTATTTGATTTCTT]

[+] EMBL CD082488             [CCT CGAGGCCAAAAATTCGGCACGAGGGACGATGTCACTTTTACTATTAAACCCGGTGAATGTGTTGGAATTGTTGGCCGCACAGGATCTGGTAAAAGTAGTCTCATCAAAGTATTATTACGTCTGGTTGACCACCTCCCTGGACCTTATACAAACCAATATGTAGCCAATCAAACGGGATTTATAGGTGCCACCGGTCAGGTATTTGTCGATGGAATAGACGTTCGCACTGTTCCTCTCACCTTACTTCGTTCTCGAATTCTAACTATTTGCCAGGAACCATTTCTCTTTTCTGGGTGTTTACGAGATAATCTAGATCCTGAGAATAAACTAAATGATTCTGTATTAGAAGAAGTTTTATTGAAATGTCAACTGGCTACAAGTCGTTTACAAGCCTCTCAGTGGTTACTTCGTGAAGTTGGTGAATCTGGACGAGATATATCTGCCGGGCAAAGGCAATTGATTTGTTTAGCTCGAGCTTTACTTCGTCAACCTAGGCCAAAAATCATTTGTTTAGATGAAGCCACTGCTTCAGTAGACAATAAATGTGAAGAAACTATTCATCAAGTCCTTGACCAAGAATTTCAAGGAGCCACAATATTACTCATAGCCCACCGACTTGCATCAGTTCGTCGTTTATGCTCACGTGTCATAGTCATGCAGTCTGGACGATTAATTGCAGAAGGTCCGCCAAACGAAACTNTAGATACTGTATTCAATCATGTCGAAACCAGAGATCTGGTC CACTAT AACAGTGACATT ATTTATAGATCTGATNTG TAGCT ACTGAAATATGCATTA TATNNTA TA TTTTAAT ATATGGATTNGAT     ]
[+] EMBL CD082676             [CCTCCGAGGCCAATAATTCGGCACGAGGGACGATGTCACTTTTACTATTAAACCCGGTGAATGTGTTGGAATTGTTGGCCGCACAGGATCTGGTAAAAGTAGTCTCATCAAAGTATTATTACGTCTGGTTGACCACCTCCCTGGACCTTATACAAACCAATATGTAGCCAATCAAACGGGATTTATAGGTGCCACCGGTCAGGTATTTGTCGATGGAATAGACGTTCGCACTGTTCCTCTCACCTTACTTCGTTCTCGAATTCTAACTATTTGCCAGGAACCATTTCTCTTTTCTGGGTGTTTACGAGATAATCTAGATCCTGAGAATAAACTAAATGATTCTGTATTAGAAGAAGTTTTATTGAAATGTCAACTGGCTACAAGTCGTTTACAAGCCTCTCAGTGGTTACTTCGTGAAGTTGGTGAATCTGGACGAGATATATCTGCCGGGCAAAGGCAATTGATTTGTTTAGCTCGAGCTTTACTTCGTCAACCTAGGCCAAAAATCATTTGTTTAGATGAAGCCACTGCTTCAGTAGACAATAAATGTGAAGAAACTATTCATCAAGTCCTTGACCAAGAATTTCAAGGAGCCACAATATTACTCATAGCCCACCGACTTGCATCAGTTCGTCGTTTATGCTCACGTGTCATAGTCATGCAGTCTGGACGATTAATTGCAGAAGGTCCGNCAA                                                                                                                                                      ]
[-] EMBL CD076085             [                                                                                                                                                                                                                                                           GTTCTCGAATTCTAACTATTTGCCAGGAACCATTTCTCTTTTCTGGGTGTTTACGAGATAATCTAGATCCTGAGAATAAACTAAATGATTCTGTATTAGAAGAAGTTTTATTGAAATGTCAACTGGCTACAAGTCGTTTACAAGCCTCTCAGTGGTTACTTCGTGAAGTTGGTGAATCTGGACGAGATATATCTGCCGGGCAAAGGCAATTGATTTGTTTAGCTCGAGCTTTACTTCGTCAACCTAGGCCAAAAATCATTTGTTTAGATGAAGCCACTGCTTCAGTAGACAATAAATGTGAAGAAACTATTCATCAAGTCCTTGACCAAGAATTTCAAGGAGCCACAATATTACTCATAGCCCACCGACTTGCATCAGTTCGTCGTTTATGCTCACGTGTCATAGTCATGCAGTCTGGACGATTAATTGCAGAAGGTCCGCCAAACGAAACTTTAGATACTGTATTCAATCATGTCGAAACCAGAGATCTGGTCACACTATAAACAGTGACATTAATTTATAGATCTGATTTGTTAGCTAACTGAATTATGCATTATTATTTTATTATTTTTAATAATATGTATTTGATTTCTT]
[+] EMBL BG931137             [                                                                                                                                                                                                                                                                                GCCAGGAACCATTTCTCTTTTCTGGGTGTTTACGAGATAATCTAGATCCTGAGAATAAACTAAATGATTCTGTATTAGAAGAAGTTTTATTGAAATGTCAACTGGCTACAAGTCGTTTACAAGCCTCTCAGTGGTTACTTCGTGAAGTTGGTGAATCTGGACGAGATATATCTGCCGGGCAAAGGCAATTGATTTGTTTAGCTCGAGCTTTACTTCGTCAACCTAGGCCAAAAATCATTTGTTTAGATGAAGCCACTGCTTCAGTAGACAATAAAT                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD076270             [                                                                                                                                                                                                                                                                                                            TTTACGAGATAATCTAGATCCTGAGAATAAACTAAATGATTCTGTATTAGAAGAAGTTTTATTGAAATGTCAACTGGCTACAAGTCGTTTACAAGCCTCTCAGTGGTTACTTCGTGAAGTTGGTGAATCTGGACGAGATATATCTGCCGGGCAAAGGCAATTGATTTGTTTAGCTCGAGCTTTACTTCGTCAACCTAGGCCAAAAATCATTTGTTTAGATGAAGCCACTGCTTCAGTAGACAATAAATGTGAAGAAACTATTCATCAAGTCCTTGACCAAGAATTTCAAGGAGCCACAATATTACTCATAGCCCACCGACTTGCATCAGTTCGTCGTTTATGCTCACGTGTCATAGTCATGCAGTCTGGACGATTAATTGCAGAAGGTCCGCCAAACGAAACTTTAGATACTGTATTCAATCATGTCGAAACCAGAGATCTGGTCACACTATAAACAGTGACATTAATTTATAGATCTGATTTGTTAGCTAACTGAATTATGCATTATTATTTTATTATTTTTAATAATATGTATTTGATTTC  ]


>consensus_9462#0 CCTCGAGGCCAAAAATTCGGCACGAGGGACGATGTCACTTTTACTATTAAACCCGGTGAA TGTGTTGGAATTGTTGGCCGCACAGGATCTGGTAAAAGTAGTCTCATCAAAGTATTATTA CGTCTGGTTGACCACCTCCCTGGACCTTATACAAACCAATATGTAGCCAATCAAACGGGA TTTATAGGTGCCACCGGTCAGGTATTTGTCGATGGAATAGACGTTCGCACTGTTCCTCTC ACCTTACTTCGTTCTCGAATTCTAACTATTTGCCAGGAACCATTTCTCTTTTCTGGGTGT TTACGAGATAATCTAGATCCTGAGAATAAACTAAATGATTCTGTATTAGAAGAAGTTTTA TTGAAATGTCAACTGGCTACAAGTCGTTTACAAGCCTCTCAGTGGTTACTTCGTGAAGTT GGTGAATCTGGACGAGATATATCTGCCGGGCAAAGGCAATTGATTTGTTTAGCTCGAGCT TTACTTCGTCAACCTAGGCCAAAAATCATTTGTTTAGATGAAGCCACTGCTTCAGTAGAC AATAAATGTGAAGAAACTATTCATCAAGTCCTTGACCAAGAATTTCAAGGAGCCACAATA TTACTCATAGCCCACCGACTTGCATCAGTTCGTCGTTTATGCTCACGTGTCATAGTCATG CAGTCTGGACGATTAATTGCAGAAGGTCCGCCAAACGAAACTTTAGATACTGTATTCAAT CATGTCGAAACCAGAGATCTGGTCCACTATAACAGTGACATTATTTATAGATCTGATTTG TAGCTACTGAATTATGCATTATATTTTATATTTTAATATATGTATTTGATTTCTT



consensusID : consensus_9462#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 721
fasta sequence
                              [TTCTGCACGACGGCTANCTTGGCTGCTAGTTGTTGGTTAAGTATTACACTACAATTAATTGGCAGTGCTGTGATTACTGGTGTGGTCATTGTATCATTAGTTGGTCGATTATTTGATTGGACACATGTAGCTTCCATCGGTTTGTCGGTTGTGTATGCACTTAATATTTCTGGTTTAATGACTAGTGTTGTATATGATATGACTGAAACAGAGAAAAATCTTGTAGCTGTAGAACGCTGTCAAGAATTAACTGATGATACTCCAATCGAACACGATACTGTAGTCAATTAAACCCACGGGGCCTCAACCTCGTTCTTCGTCTCACAGTCACCTTCGTTTACCGAAAGAGAGGAAAAGTGGTATTGCTTATCCTACCGGACTACTGCCTAACTGGCCAGCATCTGGATCCATTTTTTTCAACAATGTTTCGCTTACTTACCGTCAAAACTCCCAATCAGTTAATCAACAATCTGTTAAAGCTCTTGACGATGTCACTTTTACTATTAAACCCGGTGAATGTGTTGGAATTGTTGGCCGCACAGGATCTGGTAAAAGTAGTCTCATCAAAGTATTATTACGTCTGGTTGACCACCTCCCTGGACCTTATACAAACCAATATGTAGCCAATCAAACGGGATTTATAGGTGCCACCGGTCAGGTATTTGTCGATGGAATAGACGTTCGCACTGTTCCTCTCACCTTACTTCGTTCTCGAATTCTA]

[+] EMBL CD081175             [TTCTGCACGACGGCTANCTTGGCTGCTAGTTGTTGGTTAAGTATTACACTACAATTAATTGGCAGTGCTGTGATTACTGGTGTGGTCATTGTATCATTAGTTGGTCGATTATTTGATTGGACACATGTAGCTTCCATCGGTTTGTCGGTTGTGTATGCACTTAATATTTCTGGTTTAATGACTAGTGTTGTATATGATATGACTGAAACAGAGAAAAATCTTGTAGCTGTAGAACGCTGTCAAGAATTAACTGATGATACTCCAATCGAACACGATACTGTAGTCAATTAAACCCACGGGGCCTCAACCTCGTTCTTCGTCTCACAGTCACCTTCGTTTACCGAAAGAGAGGAAAAGTGGTATTGCTTATCCTACCGGACTACTGCCTAACTGGCCAGCATCTGGATCCATTTTTTTCAACAATGTTTCGCTTACTTACCGTCAAAACTCCCAATCAGTTAATCAACAATCTGTTAAAGCTCTTGACGATGTCACTTTTACTATTAAACCCGGTGAATGTGTTGGAATTGTTGGCCGCACAGGATCTGGTAAAAGTAGTCTCATCAAAGTATTATTACGTCTGGTTGACCACCTCCCTGGACCTTATACAAACCAATATGTAGCCAATCAAACGGGATTTATAGGTGCCACCGGTCAGGTATTTGTCGATGGAATAGACGTTCGCACTGTTCCTCTCACCTTACTTCGTTCTCGAATTCTA]


>consensus_9462#1 TTCTGCACGACGGCTANCTTGGCTGCTAGTTGTTGGTTAAGTATTACACTACAATTAATT GGCAGTGCTGTGATTACTGGTGTGGTCATTGTATCATTAGTTGGTCGATTATTTGATTGG ACACATGTAGCTTCCATCGGTTTGTCGGTTGTGTATGCACTTAATATTTCTGGTTTAATG ACTAGTGTTGTATATGATATGACTGAAACAGAGAAAAATCTTGTAGCTGTAGAACGCTGT CAAGAATTAACTGATGATACTCCAATCGAACACGATACTGTAGTCAATTAAACCCACGGG GCCTCAACCTCGTTCTTCGTCTCACAGTCACCTTCGTTTACCGAAAGAGAGGAAAAGTGG TATTGCTTATCCTACCGGACTACTGCCTAACTGGCCAGCATCTGGATCCATTTTTTTCAA CAATGTTTCGCTTACTTACCGTCAAAACTCCCAATCAGTTAATCAACAATCTGTTAAAGC TCTTGACGATGTCACTTTTACTATTAAACCCGGTGAATGTGTTGGAATTGTTGGCCGCAC AGGATCTGGTAAAAGTAGTCTCATCAAAGTATTATTACGTCTGGTTGACCACCTCCCTGG ACCTTATACAAACCAATATGTAGCCAATCAAACGGGATTTATAGGTGCCACCGGTCAGGT ATTTGTCGATGGAATAGACGTTCGCACTGTTCCTCTCACCTTACTTCGTTCTCGAATTCT A



consensusID : consensus_9462#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 576
fasta sequence
                              [ATCTGCCGGGCAAAGGCAATTGATTTGTTTAGCTCGAGCTTTACTTCGTCAACCTAGGCCAAAAATCATTTGTTTAGATGAAGCCACTGCTTCAGTAGACAATAAATGTGAAGAAACTATTCATGTAAGATTTCATTCTGTGTTAGTCATTAATTGATAAATTAACTAGCATTACTGTCCAGACTTTGGTTATTGTATAGCATGCTCCAGCTTGTTGTAAAGAGGTATACGATAGATCACTCGAAATGACTTGGTTTTATCTACCATGCGACTATTATCAACCAAGTGTCTAAATTAATTCACAGAGAATCTAGATTGTGATATATCTTTGGCTAAGCTATTGAACGGAATCCGGTCTAAATTACTGCACAAATAGTTTATCAATCTTTTTTTCTCATTAGTTGGATCATAATTGCTGAAATTTATATTCTTGTTAAAAGTTCAGATGTTATAGCTCTCATATCTTTTTTTATTGTCTAATCCTCTCTTCCATTATCCAATGAATCGAATTCTATATTCTTTGTGATTTCCAACCAGCTGAAGTATTTATCTGTAATTTCGACATTGAGATATTCA]

[-] EMBL CD115348             [ATCTGCCGGGCAAAGGCAATTGATTTGTTTAGCTCGAGCTTTACTTCGTCAACCTAGGCCAAAAATCATTTGTTTAGATGAAGCCACTGCTTCAGTAGACAATAAATGTGAAGAAACTATTCATGTAAGATTTCATTCTGTGTTAGTCATTAATTGATAAATTAACTAGCATTACTGTCCAGACTTTGGTTATTGTATAGCATGCTCCAGCTTGTTGTAAAGAGGTATACGATAGATCACTCGAAATGACTTGGTTTTATCTACCATGCGACTATTATCAACCAAGTGTCTAAATTAATTCACAGAGAATCTAGATTGTGATATATCTTTGGCTAAGCTATTGAACGGAATCCGGTCTAAATTACTGCACAAATAGTTTATCAATCTTTTTTTCTCATTAGTTGGATCATAATTGCTGAAATTTATATTCTTGTTAAAAGTTCAGATGTTATAGCTCTCATATCTTTTTTTATTGTCTAATCCTCTCTTCCATTATCCAATGAATCGAATTCTATATTCTTTGTGATTTCCAACCAGCTGAAGTATTTATCTGTAATTTCGACATTGAGATATTCA]


>consensus_9462#2 ATCTGCCGGGCAAAGGCAATTGATTTGTTTAGCTCGAGCTTTACTTCGTCAACCTAGGCC AAAAATCATTTGTTTAGATGAAGCCACTGCTTCAGTAGACAATAAATGTGAAGAAACTAT TCATGTAAGATTTCATTCTGTGTTAGTCATTAATTGATAAATTAACTAGCATTACTGTCC AGACTTTGGTTATTGTATAGCATGCTCCAGCTTGTTGTAAAGAGGTATACGATAGATCAC TCGAAATGACTTGGTTTTATCTACCATGCGACTATTATCAACCAAGTGTCTAAATTAATT CACAGAGAATCTAGATTGTGATATATCTTTGGCTAAGCTATTGAACGGAATCCGGTCTAA ATTACTGCACAAATAGTTTATCAATCTTTTTTTCTCATTAGTTGGATCATAATTGCTGAA ATTTATATTCTTGTTAAAAGTTCAGATGTTATAGCTCTCATATCTTTTTTTATTGTCTAA TCCTCTCTTCCATTATCCAATGAATCGAATTCTATATTCTTTGTGATTTCCAACCAGCTG AAGTATTTATCTGTAATTTCGACATTGAGATATTCA



consensusID : consensus_9462#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 565
fasta sequence
                              [CATTGCGCTCGTAATGTTCAGAAATTACTCAGTATACAGGTTAACCTTTATTGCATAAATTACAATCTTTAACTTTGTTTCTTCATCATTATTTCTCGTGATAAAAATATATTTGAATGAGCAGATTATATTCTGATATTTTCTTCCTTGCTAATAAGTTGAAAAAGTAACTACTGGCTTGTATAAGTCCTTCTAATGACTAATTCCCCACTTAATAACAAAATGTACTATACCAAGAACACATATCTCACTTATGTAACAGTGTTTTACATTTTCCATACAAACAGCAAGTCCTTGACCAAGAATTTCAAGGAGCCACAATATTACTCATAGCCCACCGACTTGCATCAGTTCGTCGTTTATGCTCACGTGTCATAGTCATGCAGTCTGGACGATTAATTGCAGAAGGTCCGCCAAACGAAACTTTAGATACTGTATTCAATCATGTCGAAACCAGAGATCTGGTCACACTATAAACAGTGACATTAATTTATAGATCTGATTTGTTAGCTAACTGAATTATGCATTATTATTTTATTATTTTTAATAATATGTATTTGATTTC]

[-] EMBL BF936577             [CATTGCGCTCGTAATGTTCAGAAATTACTCAGTATACAGGTTAACCTTTATTGCATAAATTACAATCTTTAACTTTGTTTCTTCATCATTATTTCTCGTGATAAAAATATATTTGAATGAGCAGATTATATTCTGATATTTTCTTCCTTGCTAATAAGTTGAAAAAGTAACTACTGGCTTGTATAAGTCCTTCTAATGACTAATTCCCCACTTAATAACAAAATGTACTATACCAAGAACACATATCTCACTTATGTAACAGTGTTTTACATTTTCCATACAAACAGCAAGTCCTTGACCAAGAATTTCAAGGAGCCACAATATTACTCATAGCCCACCGACTTGCATCAGTTCGTCGTTTATGCTCACGTGTCATAGTCATGCAGTCTGGACGATTAATTGCAGAAGGTCCGCCAAACGAAACTTTAGATACTGTATTCAATCATGTCGAAACCAGAGATCTGGTCACACTATAAACAGTGACATTAATTTATAGATCTGATTTGTTAGCTAACTGAATTATGCATTATTATTTTATTATTTTTAATAATATGTATTTGATTTC]


>consensus_9462#3 CATTGCGCTCGTAATGTTCAGAAATTACTCAGTATACAGGTTAACCTTTATTGCATAAAT TACAATCTTTAACTTTGTTTCTTCATCATTATTTCTCGTGATAAAAATATATTTGAATGA GCAGATTATATTCTGATATTTTCTTCCTTGCTAATAAGTTGAAAAAGTAACTACTGGCTT GTATAAGTCCTTCTAATGACTAATTCCCCACTTAATAACAAAATGTACTATACCAAGAAC ACATATCTCACTTATGTAACAGTGTTTTACATTTTCCATACAAACAGCAAGTCCTTGACC AAGAATTTCAAGGAGCCACAATATTACTCATAGCCCACCGACTTGCATCAGTTCGTCGTT TATGCTCACGTGTCATAGTCATGCAGTCTGGACGATTAATTGCAGAAGGTCCGCCAAACG AAACTTTAGATACTGTATTCAATCATGTCGAAACCAGAGATCTGGTCACACTATAAACAG TGACATTAATTTATAGATCTGATTTGTTAGCTAACTGAATTATGCATTATTATTTTATTA TTTTTAATAATATGTATTTGATTTC



consensusID : consensus_9462#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 320
fasta sequence
                              [TCACCTCGTATTCGTGTAATTACTCTTCTGAAGGGGCCTCAACCTCGTTCTTCGTCTCACAGTCACCTTCGTTTACCGAAAGAGAGGAAAAGTGGTATTGCTTATCCTACCGGACTACTGCCTAACTGGCCAGCATCTGGATCCATTTTTTTCAACAATGTTTCGCTTACTTACCGTCAAAACTCCCAATCAGTTAATCAACAATCTGTTAAAGCTCTTGACGATGTCACTTTTACTATTAAACCCGGTGAATGTGTTGGAATTGTTGGCCGCACAGGATCTGGTANAAGCAGTCTCATNCAAGTATTATTACGTCTGGT]

[+] EMBL CD141573             [TCACCTCGTATTCGTGTAATTACTCTTCTGAAGGGGCCTCAACCTCGTTCTTCGTCTCACAGTCACCTTCGTTTACCGAAAGAGAGGAAAAGTGGTATTGCTTATCCTACCGGACTACTGCCTAACTGGCCAGCATCTGGATCCATTTTTTTCAACAATGTTTCGCTTACTTACCGTCAAAACTCCCAATCAGTTAATCAACAATCTGTTAAAGCTCTTGACGATGTCACTTTTACTATTAAACCCGGTGAATGTGTTGGAATTGTTGGCCGCACAGGATCTGGTANAAGCAGTCTCATNCAAGTATTATTACGTCTGGT]


>consensus_9462#4 TCACCTCGTATTCGTGTAATTACTCTTCTGAAGGGGCCTCAACCTCGTTCTTCGTCTCAC AGTCACCTTCGTTTACCGAAAGAGAGGAAAAGTGGTATTGCTTATCCTACCGGACTACTG CCTAACTGGCCAGCATCTGGATCCATTTTTTTCAACAATGTTTCGCTTACTTACCGTCAA AACTCCCAATCAGTTAATCAACAATCTGTTAAAGCTCTTGACGATGTCACTTTTACTATT AAACCCGGTGAATGTGTTGGAATTGTTGGCCGCACAGGATCTGGTANAAGCAGTCTCATN CAAGTATTATTACGTCTGGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9462#1      ------------------------------------------------------------
consensus_9462#4      ------------------------------------------------------------
consensus_9462#0      CCTCGAGGCCAAAAATTCGGCACGAGGGACGATGTCACTTTTACTATTAAACCCGGTGAA 60
consensus_9462#3      ------------------------------------------------------------
consensus_9462#2      ------------------------------------------------------------
                                                                                  

consensus_9462#1      ------------------------------------------------------------
consensus_9462#4      ------------------------------------------------------------
consensus_9462#0      TGTGTTGGAATTGTTGGCCGCACAGGATCTGGTAAAAGTAGTCTCATCAAAGTATTATTA 120
consensus_9462#3      ------------------------------------------------------------
consensus_9462#2      ------------------------------------------------------------
                                                                                  

consensus_9462#1      ---------------------------------TTCTGCACGACGGCTANCTTGGCTGCT 27
consensus_9462#4      ------------------------------------------------------------
consensus_9462#0      CGTCTGGTTGACCACCTCCCTGGACCTTATACAAACCAATATGTAGCCAATCAAACGGGA 180
consensus_9462#3      ------------------------------------------------------------
consensus_9462#2      ------------------------------------------------------------
                                                                                  

consensus_9462#1      AGTTGTTGGTTAAGTATTACACTACAATTAATTGGCAGTGCTGTGATTACTGGTGTGGTC 87
consensus_9462#4      ------------------------------------------------------------
consensus_9462#0      TTTATAGGTGCCACCGGTCAGGTATTTGTCGATGGAATAGACGTTCGCACTGTTCCTCTC 240
consensus_9462#3      ------------------------------------------------------------
consensus_9462#2      ------------------------------------------------------------
                                                                                  

consensus_9462#1      ATTGTATCATTAGTTGGTCGATTATTTGATTGGACACATGTAGCTTCCATCGGTTTGTCG 147
consensus_9462#4      ------------------------------------------------------------
consensus_9462#0      ACCTTACTTCGTTCTCGAATTCTAACTATTTGCCAGGA-ACCATTTCTCTTTTCTGGGTG 299
consensus_9462#3      ----CATTGCGCTCGTAATGTTCAGAAATTACTCAGTATACAGGTTAACCTTTAT---TG 53
consensus_9462#2      ---------------------------ATCTGCCGGGCAAAGGCAATTGATTTGT--TTA 31
                                                                                  

consensus_9462#1      GTTGTGTATGCACTTAATATTTCTGGTTTAATGACTAGTGTTGTATATGATATGACTGAA 207
consensus_9462#4      ------------------------------------------------------------
consensus_9462#0      TTTACGA-GATAATCTAGATCCTGAGAATAAACTAAATGATTCTGTATTAGAAGAAGT-T 357
consensus_9462#3      CATAAAT-TACAATCTTTAACTTT-GTTTCTTCATCATTATTTCTCGTGATAAAAA---T 108
consensus_9462#2      GCTCGAGCTTTACTTCGTCAACCTAGGCCAAAAATCATTTGTTTAGATGAAGCCACTGCT 91
                                                                                  

consensus_9462#1      ACAGAGAAAAATCTTGTAGCTGTAGAACGCTGTCAAGAATTAACTGATGATACTCCAATC 267
consensus_9462#4      -----------------------------------------------------TCACCTC 7
consensus_9462#0      TTATTGAAATGTCAACTGGCTACAAGTCGTTTACAAGCCTCTCAGTGGTTACTTCGTGAA 417
consensus_9462#3      ATATTTGAATG--AGCAGATTATATTCTGATATTTTCTTCCTTGCTAATAAGTTGAAAAA 166
consensus_9462#2      TCAGTAGACAAT-AAATGTGAAGAAACTATTCATGTAAGATTTCATTCTGTGTTAGTCAT 150
                                                                           *      

consensus_9462#1      GAACACGATACTGTAGTCAATTAAACCCACGGGGCCTCAACCTCGTTCTTCGTCTCACAG 327
consensus_9462#4      GTATTCG----TGTAATTACTCTT-CTGAAGGGGCCTCAACCTCGTTCTTCGTCTCACAG 62
consensus_9462#0      GTTGGTGAATCTGGACGAGATATATCTGCCGGG---CAAAGGCAATTGATTTGTTTAGCT 474
consensus_9462#3      GTAACTA---CTGGCTTGTATAAGTCCTTCTAA---TGAC--TAATTCCCCACTTAATAA 218
consensus_9462#2      -TAATTGA---TAAATTAACTAGCATTACTGTC---CAGA---CTTTGGTTATTGTATAG 200
                                 *        *                        **         *   

consensus_9462#1      TCACCTTCGTT-TACCGAAAGAGAGGAAAAGTGGTATTGCTTATCCTACCGGACTACTGC 386
consensus_9462#4      TCACCTTCGTT-TACCGAAAGAGAGGAAAAGTGGTATTGCTTATCCTACCGGACTACTGC 121
consensus_9462#0      CGAGCTTTACTTCGTCAACCTAGGCCAAAAATCAT-TTGTTTAGATGAA---GCCACTGC 530
consensus_9462#3      CAAAATGTACTATACCA----AGAACACATATC---TCACTTATGTAA------CAGTGT 265
consensus_9462#2      CATGCTCCAGCTTGTTGTAAAGAGGTATACGATAGATCACTCGAAATGACTTGGTTTTAT 260
                           *                    * *       *   *                *  

consensus_9462#1      CTAACTGGCCAGCATCTGGATCCATTTTTTTCAACAATGTTTCGCTTACTTACCGTCAAA 446
consensus_9462#4      CTAACTGGCCAGCATCTGGATCCATTTTTTTCAACAATGTTTCGCTTACTTACCGTCAAA 181
consensus_9462#0      TTCAGTAGACAATAAATGTGAAGAAACTATTCATCAAGTCCTTGACCAAGAATTTCAAGG 590
consensus_9462#3      TT---TACATTTTCCATACAAA---------CAGCAAGTCCTTGACCAAGAATTTCAAGG 313
consensus_9462#2      CT-ACCATGCGACTATTATCAACCAAGTGTCTA--AATTAATTCACAGAGAATCT----A 313
                       *              *               *  **    *         *        

consensus_9462#1      ACTCCCAATCAGTTAATCAACAATCTGTTAAAGCTCTTGACGATGTCACTTTTACTATTA 506
consensus_9462#4      ACTCCCAATCAGTTAATCAACAATCTGTTAAAGCTCTTGACGATGTCACTTTTACTATTA 241
consensus_9462#0      AGCCACAAT--ATTACTCA-TAGCCCACCGACTTGCATCAGTTCGTCGTTTATGCTCACG 647
consensus_9462#3      AGCCACAAT--ATTACTCA-TAGCCCACCGACTTGCATCAGTTCGTCGTTTATGCTCACG 370
consensus_9462#2      GATTGTGATATATCTTTGGCTAAGCTATTGAACGGAATCCGGTCTAAATTACTGCACAAA 373
                             **   *   *    *  *     *      *           *  * *     

consensus_9462#1      AACCCGGTGAATGT-GTTGGAATTGTTGGCCGCACAGGATCTGGTAAAAG--TAGTCTCA 563
consensus_9462#4      AACCCGGTGAATGT-GTTGGAATTGTTGGCCGCACAGGATCTGGTANAAG--CAGTCTCA 298
consensus_9462#0      TGTCATAGTCATGCAGTCTGGACGATTAATTGCAGAAGGTCCGCCAAACG--AAACTTTA 705
consensus_9462#3      TGTCATAGTCATGCAGTCTGGACGATTAATTGCAGAAGGTCCGCCAAACG--AAACTTTA 428
consensus_9462#2      TAGTTTATCAATCT-TTTTTTCTCATTAGTTGGATCATAATTGCTGAAATTTATATTCTT 432
                                **    *        **    * *        *    *            

consensus_9462#1      TCAAA-GTATT--ATTACGTCTGGTTGACCACCTCCCTGGACCTTATACAAACCAATATG 620
consensus_9462#4      TNCAA-GTATT--ATTACGTCTGGT----------------------------------- 320
consensus_9462#0      GATACTGTATTCAATCATGTCGAA---ACCAGAGATCTGGTC-CACTATAA-CAGTGACA 760
consensus_9462#3      GATACTGTATTCAATCATGTCGAA---ACCAGAGATCTGGTCACACTATAAACAGTGACA 485
consensus_9462#2      GTTAAAAGTTCAGATGTTATAGCTCTCATATCTTTTTTTATTGTCTAATCCTCTCTTCCA 492
                         *     *   **    *                                        

consensus_9462#1      TAGCCAATCAAACGGGATTTATAGGTGCCACCGGTCAGGTATTTGTCGATGGAATAGACG 680
consensus_9462#4      ------------------------------------------------------------
consensus_9462#0      TTA-TTTATAGATCTGATTTGT-AGCTA-CTGAATTATGCATTAT---ATTTTATA--TT 812
consensus_9462#3      TTAATTTATAGATCTGATTTGTTAGCTAACTGAATTATGCATTATT--ATTTTATTATTT 543
consensus_9462#2      TTATCCAATGAATCGAATTCTATATTCTTTGTGATTTCCAACCAGCTGAAGTATTTATCT 552
                                                                                  

consensus_9462#1      TTCGCACTGTTCCTCTCACCTTACTTCGTTCTCGAATTCTA 721
consensus_9462#4      -----------------------------------------
consensus_9462#0      TTAATA-TATGTATTTGATTTCTT----------------- 835
consensus_9462#3      TTAATAATATGTATTTGATTTC------------------- 565
consensus_9462#2      GTAATTTCGACATTGAGATATTCA----------------- 576
                                                               




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)