These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9471#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 564 fasta sequence [ATTATCTATAGCCCAAAAACAAACATCACAAAAATCTGTTACACAAGAAGAAGAAGAAATTTTACTGACTTCAGATTACAATAATCCATGGTCTACTATAGATCCAATTAATCGTTTATCTACTATTCGTTATCGACCTGCTACATCTGCTGCTGAAAATCATTATAAACAAGATTTGCCTGTTCATTATTCATGTACATATCATATAATCAAGGTTATTTCCGCTTATAATGTAGCTGTTGGTTTAGCTCGTGGCCATTCAGTATTTCGTCTTTTAGAGAAACTATCAAATCGACTAACTCATCTTTATCTAGCTGGACGAGTAACATG-TCCCATTATATCATTATCAGGTCAACCATGTCAATATGAACTGCATCGTGTACCAGATGATTGCAATACACTGAAGGTTATTCTGTCTACTATAGATAATAAAATTAGTGAAGATTATACTGCTTTTAATTCTGATGGAAATTTACTATCCCAGAATCACTATCAACCACATTCTAGTATAAATAAGTTACATAGAACTGACTAGCACTTAAAGATGAATATATCGTTCCTTTT] [+] EMBL CD161471 [ATTATCTATAGCCCAAAAACAAACATCACAAAAATCTGTTACACAAGAAGAAGAAGAAATTTTACTGACTTCAGATTACAATAATCCATGGTCTACTATAGATCCAATTAATCGTTTATCTACTACTCGTTATCGACCTGCTACATCTGCTGCTGAAAATCATTATAAACAAGATTTGCCTGTTCATTATTCATGTACATATCATATAATCAAGGTTATTTCCGCTTATAATGTAGCTGTTGGTTTAGCTCGTGGCCATTCAGTATTTCGTCTTTTAGAGAAACTATCAAATCGACTAACTCATCTTTATCTAGCTGGACGAGTAACATGTTCCCATTATATCATTATCAGGTCAACCATGTCAATATGAACTGCATCGTGTACCAGATGAT ] [+] EMBL CD202969 [ATTATCTATAGCCCAAAAACAAACATCACAAAAATCTGTTACACAAGAAGAAGAAGAAATTTTACTGACTTCAGATTACAATAATCCATGGTCTACTATAGATCCAATTAATCGTTTATCTACTATTCGTTATCGACCTGCTACATCTGCTGCTGAAAATCATTATAAACAAGATTTGCCTGTTCATTATTCATGTACATATCATATAATCAAGGTTATTTCCGCTTATAATGTAGCTGTTGGTTTAGCTCGTGGCCATTCAGTATTTCGTCTTTTAGAGAAACTATCAAATCGACTAACTCATCTTTATCTAGCTGGACGAGTAACATG TCCCATTATATCATTATCAGTTCAACCATGTCAATATGAACTGCATCGTGTA ] [+] EMBL CD161497 [ATTATCTATAGCCCAAAAACAAACATCACAAAAATCTGTTACACAAGAAGAAGAAGAAATTTTACTGACTTCAGATTACAATAATCCATGGTCTACTATAGATCCAATTAATCGTTTATCTACTATTCGTTATCGACCTGCTACATCTGCTGCTGAAAATCATTATAAACAAGATTTGCCTGTTCATTATTCATGTACATATCATATAATCAAGGTTATTTCCGCTTATAATGTAGCTGTTGGTTTAGCTCGTGGCCATTCAGTATTTCGTCTTTTAGAGAAACTATCAAATCGACTAACTCATCTTTATCTAGCTGGACGAGTAACATG TCCCATTATATCATTATCAGGTCAACCATGTCAATATGAACTGCATCGTGTACCAGATGAT ] [+] EMBL CD123363 [ATTATCTATAGCCCAAAAACAAACATCACAAAAATCTGTTACACAAGAAGAAGAAGAAATTTTACTGACTTCAGATTACAATAATCCATGGTCTACTATAGATCCAATTAATCGTTTATCTACTATTCGTTATCGACCTGCTACATCTGCTGCTGAAAATCATTATAAACAAGATTTGCCTGTTCATTATTCATGTACATATCATATAATCAAGGTTATTTCCGCTTATAATGTAGCTGTTGGTTTAGCTCGTGGCCATTCAGTATTTCGTCTTTTAGAGAAACTATCAAATCGACTAACTCATCTTTATCTAGCTGGACGAGTAACATG TCCCATTATATCATTATCAGGTCAACCATGTCAATATGAACTGCATCGTGTACCAGATGAT ] [+] EMBL CD202968 [ATTATCTATAGCCCAAAAACAAACATCACAAAAATCTGTTACACAAGAAGAAGAAGAAATTTTACTGACTTCAGATTACAATAATCCATGGTCTACTATAGATCCAATTAATCGTTTATCTACTATTCGTTATCGACCTGCTACATCTGCTGCTGAAAATCATTATAAACAAGATTTGCCTGTTCATTATTCATGTACATATCATATAATCAAGGTTATTTCCGCTTATAATGTAGCTGTTGGTTTAGCTCGT GCCATTCAGTATTTCGTCTTTTAGAGAAACTATCAAATCGACTAACTCATCTTTATCTAGCTGGACGAGTAACATG TCCCATTATATCATTATCCGGTCCACCCTGTCCATATTAACTGGATCGTGTACCAGATTAT ] [-] EMBL CD146477 [ TTATCTATAGCCCAAAAACAAACATCACAAAAATCTGTTACACAAGAAGAAGAAGAAATTTTACTGACTTCAGATTACAATAATCCATGGTCTACTATAGATCCAATTAATCGTTTATCTACTATTCGTTATCGACCTGCTACATCTGCTGCTGAAAATCATTATAAACAAGATTTGCCTGTTCATTATTCATGTACATATCATATAATCAAGGTTATTTCCGCTTATAATGTAGCTGTTGGTTTAGCTCGTGGCCATTCAGTATTTCGTCTTTTAGAGAAACTATCAAATCGACTAACTCATCTTTATCTAGCTGGACGAGTAACATG TCCCATTATATCATTATCAGGTCAACCATGTCAATATGAACTGCATCGTGTACCAGATGATT ] [-] EMBL CD146422 [ TTATCTATAGCCCAAAAACAAACATCACAAAAATCTGTTACACAAGAAGAAGAAGAAATTTTACTGACTTCAGATTACAATAATCCATGGTCTACTATAGATCCAATTAATCGTTTATCTACTATTCGTTATCGACCTGCTACATCTGCTGCTGAAAATCACTATAAACAAGATTTGCCTGTTCATTATTCATGTACATATCATATAATCAAGGTTATTTCCGCTTATAATGTAGCTGTTGGTTTAGCTCGTGGCCATTCAGTATTTCGTCTTTTAGAGAAACTATCAAATCGACTAACTCATCTTTATCTAGCTGGACGAGTAACATG TCCCATTATATCATTATCAGGTCAACCATGTCAATATGAACTGCATCGTGTACCAGATGATT ] [+] EMBL CD065598 [ ATCAAATCGACTAACTCATCTTTATCTAGCTGGACGAGTAACGTG TCCCATTATATCATTATCAGGTCAACCATGTCAATATGAACTGCATCGTGTACCAGATGATTGCAATACA ] [-] EMBL CD065791 [ TCAAATCGACTAACTCATCTTTATCTAGCTGGACGAGTAACATG TCCCATTATATCATTATCAGGTCAACCATGTCAATATGAACTGCATCGTGTACCAGATGATTGCAATACTCTGAAGGTTATTCTGTCTACTATAGATAATAAAATTAGTGAAGATTATACTGCTTTTAATTCTGATGGAAATTTACTATCCCAGAATCACTATCAACCACATTCTAGTATAAATAAGTTACATAGAACTGACTAGCACTTAAAGATGAATATATCGTTCCTTTT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||