cluster # 9480

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Schistosoma mansoni
cluster # 9480 cluster # 9480 Sequences # 9 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9480#0 length = 1359 sequences # 4
consensus_9480#1 length = 590 sequences # 2

consensus_9480#2 length = 488 sequences # 2
consensus_9480#3 length = 456 sequences # 1

consensusID : consensus_9480#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1359
fasta sequence

                              [TCTGATGTCTACATCAACCTGAACTTAAGTACCTGTATTGAATCTTTTCAGGCACCGAAATAGCAGCAGTGCCTCAAGTCAAACCAGTCCTCCTGGTTCATTTTTAGTCAGTGAAATCAAACGCAATGGGCGAAATGAAGAGATTCGTAGGCGCGACGAACAGAGAGCTGAAGAAGACCGGATATTACGTCAACGGTGGGCAGAATCCAAACTTCTTGAAGAGGAAGTCGCCCGACGCCTGGAGCGTTACTTGGACTCTGAGCTTGCAAAGTTACTTGTGTTACGAAGAGTCCAGTTTAATGCCGAAATCGAACGACGAGTGGAGGCCGAACGTACTGAAGTATTACGTCGAAGAGCTGAAGAAGCTGAACGTAAAGCTAAGGAAGAAGCTGAGGCATTGCAACGACGCGAAGAAGAAGAAAAGCGACTAAGAGAGCTCAATGAGCGTCTCGCTCAAGAGAGGGAACGGGAACTCGAAGAACAAAGACGTTTGGAAGAAGAAGCTGAGCGCAAACGATGTGAAGCAGAATTACGTGAACTTGAAGAACGTCAGCGACGCGAAGCTGAAGAGCTCCAACGTATCAAAAGAGAACAAGAAATTATTCTAAATAAAAAGCGAATTCGACCAAAGTTATCGTTTACACTAAAGAAGTGAATATGTTTCCTTTCCCTCTTTCACGTCAAGTCTATAACTTTATTATTTTCTCTTATTATGCTTGATTTTCCACATTTCATTATTTTCTAAACTTTAATAACTTGAAATACATGCACATACACATACATTTAGGTGACTTTCAACTGTTTATTTGTTGTTACACCTTGTGGAAAGGCTCAAGTCTTATTAACCAAACATGTTTAGTTATCTGTGTATATACGTTGTGCTTCTTCCATTCTCGGTTAATTTCATTGTGTATTTGTGAATCTTTACACTCTTCAATTTTTTCTCGTGTTTACAGTCTTATTTTGTACATAAATTATGCAGTTTTTAAAATGATTTGACAAATTGAAAATAAGTCGTACGTTTGTGATTTCCTACTGTATTCCTTAAAAGATATTTTGTATTGGTATATTTCTCTAAGCTCTTAACAGGAAGCANATTCTGTTTCTTGTTTGATGNNTAAACATCTTAANAACACTACTCACGTTTTTG-AAATAGTTAACTCATTTGAAA-GCACACGCAAAGTTCCGGCCC-ACTTGTA-TGGCTGGAAAACCAT-AATT-CCATGTATCGAATGGGAGTGT-ACCTTGATCGGCTCGCCTCTATATAAAATTGCTCTATATTAAA-TCCACACCAAAAAACGGGGGATCGATTTCT-ACTTTTAGTATGG-GCCCTAC-TTAAGATCCCT-TTTAATTTC-GACAAAT]

[-] EMBL CD190817             [TCTGATGTCTACATCAACCTGAACTTAAGTACCTGTATTGAATCTTTTCAGGCACCGAAATAGCAGCAGTGCCTCAAGTCAAACCAGTCCTCCTGGTTCATTTTTAGTCAGTGAAATCAAACGCAATGGGCGAAATGAAGAGATTCGTAGGCGCGACGAACAGAGAGCTGAAGAAGACCGGATATTACGTCAACGGTGGGCAGAATCCAAACTTCTTGAAGAGGAAGTCGCCCGACGCCTGGAGCGTTACTTGGACTCTGAGCTTGCAAAGTTACTTGTGTTACGAAGAGTCCAGTTTAATGCCGAAATCGAACGACGAGTGGAGGCCGAACGTACTGAAGTATTACGTCGAAGAGCTGAAGAAGCTGAACGTAAAGCTAAGGAAGAAGCTGAGGCATTGCAACGACGCGAAGAAGAAGAAAAGCGACTAAGAGAGCTCAATGAGCGTCTCGCTCAAGAGAGGGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD200400             [                                                                                                                                                                                 CCGGATATTACGTCAACGGTGGGCAGAATCCAAACTTCTTGAAGAGGAAGTCGCCCGACGCCTGGAGCGTTACTTGGACTCTGAGCTTGCAAAGTTACTTGTGTTACGAAGAGTCCAGTTTAATGCCGAAATCGAACGACGAGTGGAGGCCGAACGTACTGAAGTATTACGTCGAAGAGCTGAAGAAGCTGAACGTAAAGCTAAGGAAGAAGCTGAGGCATTGCAACGACGCGAAGAAGAAGAAAAGCGACTAAGAGAGCTCAATGAGCGTCTCGCTCAAGAGAGGGAACGGGAACTCGAAGAACAAAGACGTTTGGAAGAAGAAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD079309             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGGAACGGGAACTCGAAGAACAAAGACGTTTGGAAGAAGAAGCTGAGCGCAAACGATGTGAAGCAGAATTACGTGAACTTGAAGAACGTCAGCGACGCGAAGCTGAAGAGCTCCAACGTATCAAAAGAGAACAAGAAATTATTCTAAATAAAAAGCGAATTCGACCAAAGTTATCGTTTACACTAAAGAAGTGAATATGTTTCCTTTCCCTCTTTCACGTCAAGTCTATAACTTTATTATTTTCTCTTATTATGCTTGATTTTCCACATTTCATTATTTTCTAAACTTTAATAACTTGAAATACATGCACATACACATACATTTAGGTGACTTTCAACTGTTTATTTGTTGTTACACCTTGTGGAAAGGCTCAAGTCTTATTAACCAAACATGTTTAGTTATCTGTGTATATACGTTGTGCTTCTTCCATTCTCGGTTAATTTCATTGTGTATTTGTGAATCTTTACACTCTTCAATTTTTTCTCGTGTTTACAGTCTTATTTTGTACATAAATTATGCAGTTTTTAAAATGATTTGACAAATTGAAAATAAGTCGTACGTTTGTGATTTCCTACTGTATTCCTTAAAAGATATTTTGTATTGGTATATTTCTCTAAGCTCTTAACAGGAAGCANATTCTGTTTCTTGTTTGATGNNTAAACATCTTAANAACACTACTCACGTTTTTG AAATAGTTAACTCATTTGAAA GCACACGCAAAGTTCCGGCCC ACTTGTA TGGCTGGAAAACCAT AATT CCATGTATCGAATGGGAGTGT ACCTTGATCGGCTCGCCTCTATATAAAATTGCTCTATATTAAA TCCACACCAAAAAACGGGGGATCGATTTCT ACTTTTAGTATGG GCCCTAC TTAAGATCCCT TTTAATTTC GACA   ]
[-] EMBL CD073589             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       aaaGCTTGATTTTCCACATTTCATTA TTTCTAAACTTTAATAACTTGAAATACATGCACATACACATACATTTAGGTGACTTTCAACTGTTTATTTGTTGTTACACCTTGTGGAAAGGCTCAAGTCTTATTAACCAAACATGTTTAGTTATCTGTGTATATACGTTGTGCTTCTTCCATTCTCGGTTAATTTCATTGTGTATTTGTGAATCTTTACACTCTTCAATTTTTTCTCGTGTTTACAGTCTTATTTTGTACATAAATTATGCAGTTTTTAAAATGATTTGACAAATTGAAAATAAGTCGTACGTTTGTGATTTCCTACTGTATTCCTTAAAAGATATTTTGTATTGTTATATTTCTCTAAGCTCTTAACAGGAAGCAAATTCTGTTTCTTGTTTGATGTTAAAACATCTTAAAAACACTACTCACGTTTTTGAAAATAGTTAACTCATTTGAAAGGCACACGCAAAGTTCCGGCCCAACTTGTAGTGTCTGGGAAACCATAAATTCCCATGTATCGGATGGGAGTGTGACCTTGATCGGCTCGCCTCTATATAATATTGCTCTATATTAAATTCCACACCAGAAAACAGTGGATCGATTTCTCAC TTTAGTATGGAGCACTACATAAAGATCACTATTTAATATCAGACAAAT]




>consensus_9480#0
TCTGATGTCTACATCAACCTGAACTTAAGTACCTGTATTGAATCTTTTCAGGCACCGAAA
TAGCAGCAGTGCCTCAAGTCAAACCAGTCCTCCTGGTTCATTTTTAGTCAGTGAAATCAA
ACGCAATGGGCGAAATGAAGAGATTCGTAGGCGCGACGAACAGAGAGCTGAAGAAGACCG
GATATTACGTCAACGGTGGGCAGAATCCAAACTTCTTGAAGAGGAAGTCGCCCGACGCCT
GGAGCGTTACTTGGACTCTGAGCTTGCAAAGTTACTTGTGTTACGAAGAGTCCAGTTTAA
TGCCGAAATCGAACGACGAGTGGAGGCCGAACGTACTGAAGTATTACGTCGAAGAGCTGA
AGAAGCTGAACGTAAAGCTAAGGAAGAAGCTGAGGCATTGCAACGACGCGAAGAAGAAGA
AAAGCGACTAAGAGAGCTCAATGAGCGTCTCGCTCAAGAGAGGGAACGGGAACTCGAAGA
ACAAAGACGTTTGGAAGAAGAAGCTGAGCGCAAACGATGTGAAGCAGAATTACGTGAACT
TGAAGAACGTCAGCGACGCGAAGCTGAAGAGCTCCAACGTATCAAAAGAGAACAAGAAAT
TATTCTAAATAAAAAGCGAATTCGACCAAAGTTATCGTTTACACTAAAGAAGTGAATATG
TTTCCTTTCCCTCTTTCACGTCAAGTCTATAACTTTATTATTTTCTCTTATTATGCTTGA
TTTTCCACATTTCATTATTTTCTAAACTTTAATAACTTGAAATACATGCACATACACATA
CATTTAGGTGACTTTCAACTGTTTATTTGTTGTTACACCTTGTGGAAAGGCTCAAGTCTT
ATTAACCAAACATGTTTAGTTATCTGTGTATATACGTTGTGCTTCTTCCATTCTCGGTTA
ATTTCATTGTGTATTTGTGAATCTTTACACTCTTCAATTTTTTCTCGTGTTTACAGTCTT
ATTTTGTACATAAATTATGCAGTTTTTAAAATGATTTGACAAATTGAAAATAAGTCGTAC
GTTTGTGATTTCCTACTGTATTCCTTAAAAGATATTTTGTATTGGTATATTTCTCTAAGC
TCTTAACAGGAAGCANATTCTGTTTCTTGTTTGATGNNTAAACATCTTAANAACACTACT
CACGTTTTTGAAATAGTTAACTCATTTGAAAGCACACGCAAAGTTCCGGCCCACTTGTAT
GGCTGGAAAACCATAATTCCATGTATCGAATGGGAGTGTACCTTGATCGGCTCGCCTCTA
TATAAAATTGCTCTATATTAAATCCACACCAAAAAACGGGGGATCGATTTCTACTTTTAG
TATGGGCCCTACTTAAGATCCCTTTTAATTTCGACAAAT

consensusID : consensus_9480#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 590
fasta sequence

                              [GNCAAGAATTTTTGCCGAGGGTCCTAGTGATGGTTGATCGTGGTGGTGCGTCGGGTTCTCCCGTTATGCACTCCAGATCGCGTGCTGATCGTCCTCGAAAAAGGTTGGGGTTGCGCACTTAATTCGTTTTGTCAAGTGTTTACTTCTTTCATGCACAGCTAGCCATATCTTTCGTTTAAGAAGTCGCAGAAGTGCAACCCCAGGATGATTAAATAATACCTGTATTGAATCTTTTCAGGCACCGAAATAGTAGCAGTGCCTCAAGTCAAACCAGTTCTCCTGGTTCATTTTTAGTCAGTGAAATCAAACGCAATGGGCGAAATGAAGAGATTCGTAGGCGTGACGAACAGAGAGCTGAAGAAGACCGGATATTACGTCAACGGTGGGCAGAATCCAAACTTCTTGAAGAGGAAGTCGCTCGACGCCTGGAGCGTTACTTGGACTCTGAGCTTGCAAAGTTACTTGGGTTACGAAGAGTCCAGTTTAATGGCCGAAATTGAACGACGAGTGGAGGCTGAACGTACTGAGGTATTACGTCGAAAGAGCTGAAGAAGCTGAACGTAAAGCTAAAGAAGAAGCTGAGGGCATTG]

[+] EMBL CD079584             [GNCAAGAATTTTTGCCGAGGGTCCTAGTGATGGTTGATCGTGGTGGTGCGTCGGGTTCTCCCGTTATGCACTCCAGATCGCGTGCTGATCGTCCTCGAAAAAGGTTGGGGTTGCGCACTTAATTCGTTTTGTCAAGTGTTTACTTCTTTCATGCACAGCTAGCCATATCTTTCGTTTAAGAAGTCGCAGAAGTGCAACCCCAGGATGATTAAATAATACCTGTATTGAATCTTTTCAGGCACCGAAATAGTAGCAGTGCCTCAAGTCAAACCAGTTCTCCTGGTTCATTTTTAGTCAGTGAAATCAAACGCAATGGGCGAAATGAAGAGATTCGTAGGCGTGACGAACAGAGAGCTGAAGAAGACCGGATATTACGTCAACGGTGGGCAGAATCCAAACTTCTTGAAGAGGAAGTCGCTCGACGCCTGGAGCGTTACTTGGACTCTGAGCTTGCAAAGTTACTTGGGTTACGAAGAGTCCAGTTTAATGGCCGAAATTGAACGACGAGTGGAGGCTGAACGTACTGAGGTATTACGTCGAAAGAGCTGAAGAAGCTGAACGTAAAGCTAAAGAAGAAGCTGAGGGCATTG]
[+] EMBL CD148527             [                                GTTGATCGTGGTGGTGCGTCGGGTTCTCCCGTTATGCTCTCCAGATCGCGTGCTGATCGTCCTCGAAAAAGGTTGGGGTTGCGCACTTAATTCGTTTTGTCAAGTGTTTACTTCTTTCATGCACAGCTAGCCATATCTTTCGTTTAAGAAGTCGCAGAAGTGCAACCCCAGGATGATTAAATAATACCTGTATTGAATCTTTTCAGGCACCGAAATAGTAGCAGTGCCTCAAGTCAAACCAGTTCTCCTGGTTCATTTTTAGTCAGTGAAATCAAACGCAATGGGCGAAATGAAGAGATTCGTAGGCGCGACGAACAGAGAGCTGAAGACGACCGGATATTACGTCAACGGTGGGCAGAATCCAAACTTCTTGAAGAGGAAGTCGCCCGACGCCTGGAGCGTTACTTGGACTCTGAGCTTGCAAAGTTACTTGTGTTACGAAGAGTCCAGTTTAATGcc                                                                                                   ]




>consensus_9480#1
GNCAAGAATTTTTGCCGAGGGTCCTAGTGATGGTTGATCGTGGTGGTGCGTCGGGTTCTC
CCGTTATGCACTCCAGATCGCGTGCTGATCGTCCTCGAAAAAGGTTGGGGTTGCGCACTT
AATTCGTTTTGTCAAGTGTTTACTTCTTTCATGCACAGCTAGCCATATCTTTCGTTTAAG
AAGTCGCAGAAGTGCAACCCCAGGATGATTAAATAATACCTGTATTGAATCTTTTCAGGC
ACCGAAATAGTAGCAGTGCCTCAAGTCAAACCAGTTCTCCTGGTTCATTTTTAGTCAGTG
AAATCAAACGCAATGGGCGAAATGAAGAGATTCGTAGGCGTGACGAACAGAGAGCTGAAG
AAGACCGGATATTACGTCAACGGTGGGCAGAATCCAAACTTCTTGAAGAGGAAGTCGCTC
GACGCCTGGAGCGTTACTTGGACTCTGAGCTTGCAAAGTTACTTGGGTTACGAAGAGTCC
AGTTTAATGGCCGAAATTGAACGACGAGTGGAGGCTGAACGTACTGAGGTATTACGTCGA
AAGAGCTGAAGAAGCTGAACGTAAAGCTAAAGAAGAAGCTGAGGGCATTG

consensusID : consensus_9480#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 488
fasta sequence

                              [ATGTCAAGTCTATAAAAAAATATTTTCTCTTTTTATGCTTGATTGTCCACACATCATTATTTTTTTTACTATNNTAACTTGGATAACATGCACATACACATACATTTAAGTCACTTTCAACTGTTTATTTGTTGTTACACCTTGTGGAAAGGCTCAAGTCTTATTAACCAAACATGTTTAGTTATCTGTGTATATACGTTGTGCTTCTTCCATTCTCGGTTAATTTCATTGTGTATTTGTGAATCTTTACACTCTTCAATTTTTTATCGTGTTTACAGTCTTATTTTGTACATAAATTATGCAGTTTTTAAAATGATTTGACAAATTGAAAATAAGTCGTACGTTTGTGATTTCCTACTGTATTCCTTAAAAGATATTTTGTATTGTTATATTTCTTTAAGCTCTTAACAGGAAGCAAATTCTGTTTCTTGTTTGATGTTAAAACATCTTAAAAACANTACTCACGTTTTTGAAANNNNNNNNNAAAA]

[-] EMBL AI394787             [ATGTCAAGTCTATAAAAAAATATTTTCTCTTTTTATGCTTGATTGTCCACACATCATTATTTTTTTTACTATNNTAACTTGGATAACATGCACATACACATACATTTAAGTCACTTTCAACTGTTTATTTGTTGTTACACCTTGTGGAAAGGCTCAAGTCTTATTAACCAAACATGTTTAGTTATCTGTGTATATACGTTGTGCTTCTTCCATTCTCGGTTAATTTCATTGTGTATTTGTGAATCTTTACACTCTTCAATTTTTTATCGTGTTTACAGTCTTATTTTGTACATAAATTATGCAGTTTTTAAAATGATTTGACAAATTGAAAATAAGTCGTACGTTTGTGATTTCCTACTGTATTCCTTAAAAGATATTTTGTATTGTTATATTTCTTTAAGCTCTTAACAGGAAGCAAATTCTGTTTCTTGTTTGATGTTAAAACATCTTAAAAACANTACTCACGTTTTTGAAANNNNNNNNNAAAA]
[+] EMBL AA791365             [                                                                                                                                                            AGTCTTATTAACCAAACATGTTTAGTTATCTGTGTATATACGTTGTGCTTCTTCCATTCTCGGTTAATTTCATTGTGTATTTGTGAATCTTTACACTCTTCAATTTTTTATCGTGTTTACAGTCTTATTTTGTACATAAATTATGCAGTTTTTAAAATGATTTGACAAATTGAAAATAAGctg                                                                                                                                                     ]




>consensus_9480#2
ATGTCAAGTCTATAAAAAAATATTTTCTCTTTTTATGCTTGATTGTCCACACATCATTAT
TTTTTTTACTATNNTAACTTGGATAACATGCACATACACATACATTTAAGTCACTTTCAA
CTGTTTATTTGTTGTTACACCTTGTGGAAAGGCTCAAGTCTTATTAACCAAACATGTTTA
GTTATCTGTGTATATACGTTGTGCTTCTTCCATTCTCGGTTAATTTCATTGTGTATTTGT
GAATCTTTACACTCTTCAATTTTTTATCGTGTTTACAGTCTTATTTTGTACATAAATTAT
GCAGTTTTTAAAATGATTTGACAAATTGAAAATAAGTCGTACGTTTGTGATTTCCTACTG
TATTCCTTAAAAGATATTTTGTATTGTTATATTTCTTTAAGCTCTTAACAGGAAGCAAAT
TCTGTTTCTTGTTTGATGTTAAAACATCTTAAAAACANTACTCACGTTTTTGAAANNNNN
NNNNAAAA

consensusID : consensus_9480#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 456
fasta sequence

                              [GCTTGAGAGCATTTCGAGAGCTGACTCTCCCCACTCCTACCCGTACCAGGACATTTGGGGTCTTACGTTGATTTGATCTAAACTGACATTGAATGAAGCTGAATGCGCGTAACCAGTGGTTACTATATCCTTTGTACATAAGGCGAACTAGTATATGTTTCAATATTGCTTTTTCACTTTAAATCATGTCTCTTTGCCAACATAGGAAGAAGAGAAGCGACTAAGAGAGCTCAATGAGCGTCTCGCTCAAGAGAGGGAACGGGAACTCGAAGAACAAAGACGTTTGGAAGTACGTATTCTCCCAGTGGTGTTTATGTATATTTTTCAAAAGTTATGGGCGTCGTTTATAAATTAACGCATCTTGTCAAAGTTTTTAGAAAAGCAATGACTTTTTGGACAACCGTTTTACAACTACAGAGAGATTTGTTTTATCAATTGTCCTGATAGTTTCAAATA]

[+] EMBL CD064740             [GCTTGAGAGCATTTCGAGAGCTGACTCTCCCCACTCCTACCCGTACCAGGACATTTGGGGTCTTACGTTGATTTGATCTAAACTGACATTGAATGAAGCTGAATGCGCGTAACCAGTGGTTACTATATCCTTTGTACATAAGGCGAACTAGTATATGTTTCAATATTGCTTTTTCACTTTAAATCATGTCTCTTTGCCAACATAGGAAGAAGAGAAGCGACTAAGAGAGCTCAATGAGCGTCTCGCTCAAGAGAGGGAACGGGAACTCGAAGAACAAAGACGTTTGGAAGTACGTATTCTCCCAGTGGTGTTTATGTATATTTTTCAAAAGTTATGGGCGTCGTTTATAAATTAACGCATCTTGTCAAAGTTTTTAGAAAAGCAATGACTTTTTGGACAACCGTTTTACAACTACAGAGAGATTTGTTTTATCAATTGTCCTGATAGTTTCAAATA]




>consensus_9480#3
GCTTGAGAGCATTTCGAGAGCTGACTCTCCCCACTCCTACCCGTACCAGGACATTTGGGG
TCTTACGTTGATTTGATCTAAACTGACATTGAATGAAGCTGAATGCGCGTAACCAGTGGT
TACTATATCCTTTGTACATAAGGCGAACTAGTATATGTTTCAATATTGCTTTTTCACTTT
AAATCATGTCTCTTTGCCAACATAGGAAGAAGAGAAGCGACTAAGAGAGCTCAATGAGCG
TCTCGCTCAAGAGAGGGAACGGGAACTCGAAGAACAAAGACGTTTGGAAGTACGTATTCT
CCCAGTGGTGTTTATGTATATTTTTCAAAAGTTATGGGCGTCGTTTATAAATTAACGCAT
CTTGTCAAAGTTTTTAGAAAAGCAATGACTTTTTGGACAACCGTTTTACAACTACAGAGA
GATTTGTTTTATCAATTGTCCTGATAGTTTCAAATA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9480#0      TCTGATGTCTACATCAACCTGAACTTAAGTACCTGTATTGAATCTTTTCAGGCACCGAAA 60
consensus_9480#2      ------------------------------------------------------------
consensus_9480#1      ------------------------------------------------------------
consensus_9480#3      ------------------------------------------------------------
                                                                                  

consensus_9480#0      TAGCAGCAGTGCCTCAAGTCAAACCAGTCCTCCTGGTTCATTTTTAGTCAGTGAAATCAA 120
consensus_9480#2      ------------------------------------------------------------
consensus_9480#1      ------------------------------------------------------------
consensus_9480#3      ------------------------------------------------------------
                                                                                  

consensus_9480#0      ACGCAATGGGCGAAATGAAGAGATTCGTAGGCGCGACGAACAGAGAGCTGAAGAAGACCG 180
consensus_9480#2      ------------------------------------------------------------
consensus_9480#1      ------------------------------------------------------------
consensus_9480#3      ------------------------------------------------------------
                                                                                  

consensus_9480#0      GATATTACGTCAACGGTGGGCAGAATCCAAACTTCTTGAAGAGGAAGTCGCCCGACGCCT 240
consensus_9480#2      ------------------------------------------------------------
consensus_9480#1      ------------------------------------------------------------
consensus_9480#3      ------------------------------------------------------------
                                                                                  

consensus_9480#0      GGAGCGTTACTTGGACTCTGAGCTTGCAAAGTTACTTGTGTTACGAAGAGTCCAGTTTAA 300
consensus_9480#2      ------------------------------------------------------------
consensus_9480#1      ------------------------------------------------------------
consensus_9480#3      ------------------------------------------------------------
                                                                                  

consensus_9480#0      TGCCGAAATCGAACGACGAGTGGAGGCCGAACGTACTGAAGTATTACGTCGAAGAGCTGA 360
consensus_9480#2      ------------------------------------------------------------
consensus_9480#1      ------------------------------------------------------------
consensus_9480#3      ------------------------------------------------------------
                                                                                  

consensus_9480#0      AGAAGCTGAACGTAAAGCTAAGGAAGAAGCTGAGGCATTGCAACGACGCGAAGAAGAAGA 420
consensus_9480#2      ------------------------------------------------------------
consensus_9480#1      ------------------------------------------------------------
consensus_9480#3      ------------------------------------------------------------
                                                                                  

consensus_9480#0      AAAGCGACTAAGAGAGCTCAATGAGCGTCTCGCTCAAGAGAGGGAACGGGAACTCGAAGA 480
consensus_9480#2      ------------------------------------------------------------
consensus_9480#1      ------------------------------------------------------------
consensus_9480#3      ------------------------------------------------------------
                                                                                  

consensus_9480#0      ACAAAGACGTTTGGAAGAAGAAGCTGAGCGCAAACGATGTGAAGCAGAATTACGTGAACT 540
consensus_9480#2      ------------------------------------------------------------
consensus_9480#1      ------------------------------------------------------------
consensus_9480#3      ------------------------------------------------------------
                                                                                  

consensus_9480#0      TGAAGAACGTCAGCGACGCGAAGCTGAAGAGCTCCAACGTATCAAAAGAGAACAAGAAAT 600
consensus_9480#2      ------------------------------------------------------------
consensus_9480#1      ------------------------------------------------------------
consensus_9480#3      ------------------------------------------------------------
                                                                                  

consensus_9480#0      TATTCTAAATAAAAAGCGAATTCGACCAAAGTTATCGTTTACACTAAAGAAGTGAATATG 660
consensus_9480#2      ------------------------------------------------------------
consensus_9480#1      ------------------------------------------------------------
consensus_9480#3      ------------------------------------------------------------
                                                                                  

consensus_9480#0      TTTCCTTTCCCTCTTTCACGTCAAGTCTATAACTTTATTATTTTCTCTTATTATGCTTGA 720
consensus_9480#2      -----------------ATGTCAAGTCTATAAAAAAAT-ATTTTCTCTTTTTATGCTTGA 42
consensus_9480#1      -------------------GNCAAGAATTTTTGCCGAGGGT----CCTAGTGATGGTTGA 37
consensus_9480#3      ------------------------------------------------------------
                                                                                  

consensus_9480#0      TTTTCCACATTTCATTATTTTCTAAACTTTAATAACTTGAAATACATGCACATACACATA 780
consensus_9480#2      TTGTCCACACATCATTATTTTTTTTACTATNNTAACTTGGATAACATGCACATACACATA 102
consensus_9480#1      TCGTGGTGGTGCGTCGGGTTCTCCCGTTATGC-ACTCCAGATCGCGTGCTGAT---CGT- 92
consensus_9480#3      -----------------------------------------------------------G 1
                                                                                  

consensus_9480#0      CATTTAGGTGACTTTCAACTGTTTATTTGTTGTTACACCTTGTGGAAAGGC-TCAAGTCT 839
consensus_9480#2      CATTTAAGTCACTTTCAACTGTTTATTTGTTGTTACACCTTGTGGAAAGGC-TCAAGTCT 161
consensus_9480#1      CCTCGAAAAAGGTTGGGGTTGCGCACTTAATT---CGTTTTGTC-AAGTGT-TTACTTCT 147
consensus_9480#3      CTTGAGAGCATTTCGAGAGCTGACTCTCCCCACTCCTACCCGTACCAGGACATTTGGGGT 61
                      * *         *             *        *     **   *     *      *

consensus_9480#0      TATTAACCAAACATGTTTAGTTATCTGTGTATATACGTTGTGCTTCTTCCATTCTCGGTT 899
consensus_9480#2      TATTAACCAAACATGTTTAGTTATCTGTGTATATACGTTGTGCTTCTTCCATTCTCGGTT 221
consensus_9480#1      TTCATGCACAGCTAGCCATATCTTTCGTTTA-AGAAGTCGCAGAAGTGCAACCCCAGGAT 206
consensus_9480#3      CTTACGTTGATTTGATCTAAACTGACATTGAATGAAGCTGAATGCGCGTAACCAGTGGTT 121
                               *                 *  *   * *  *          *     ** *

consensus_9480#0      AAT---TTCATTGTGTATTTGT-GAATCTTTACACTCTTCAATTTTTTCTC-GTGTTTAC 954
consensus_9480#2      AAT---TTCATTGTGTATTTGT-GAATCTTTACACTCTTCAATTTTTTATC-GTGTTTAC 276
consensus_9480#1      GAT---TAAATAATACCTGTATTGAATCTTTTCAGGCACCGAAATAGTAGCAGTGCCTCA 263
consensus_9480#3      ACTATATCCTTTGTACATAAGGCGAACTAGTATATGTTTCAATATTGCTTTTTCACTTTA 181
                        *   *   *  *   *     ***    *  *     * *  *            *  

consensus_9480#0      AGTCTTATTT-TGTACATAAATTATGC--AGTTTTTAAAATGATTTGACA-AATTGAAAA 1010
consensus_9480#2      AGTCTTATTT-TGTACATAAATTATGC--AGTTTTTAAAATGATTTGACA-AATTGAAAA 332
consensus_9480#1      AGTCAAACCAGTTCTCCTGGTTCATTTTTAGTCAGTGAAATCAAACGCAATGGGCGAAAT 323
consensus_9480#3      AATCATGTCTCTTTGCCAA---CATAGGAAG--AAGAGAAGCGACTAAGAGAGCTCAA-- 234
                      * **       *   *       **    **       **         *      **  

consensus_9480#0      TAAGTCGTACGTTTGTGATTTCCTACTGTATTCCTTAAAAGAT---ATTTTGTATTGGTA 1067
consensus_9480#2      TAAGTCGTACGTTTGTGATTTCCTACTGTATTCCTTAAAAGAT---ATTTTGTATTGTTA 389
consensus_9480#1      GAAGAGATTCGTAGGCG-TGACGAACAGAGAGCTGAAGAAGACCGGATATTACGTCAACG 382
consensus_9480#3      TGAGCGTCTCGCTCAAGAGAGGGAACGGGAACTCGAAGAACAAAGACGTTTGGAAGTACG 294
                        **     **     *       ** *        * ** *       **         

consensus_9480#0      -----TATTTCTCTAAGCTCTTAACAGGAAGCANATTCTGTTTCTTGTTTGATGNNTAAA 1122
consensus_9480#2      -----TATTTCTTTAAGCTCTTAACAGGAAGCAAATTCTGTTTCTTGTTTGATGTTAAAA 444
consensus_9480#1      GTGGGCAGAATCCAAACTTCTTGAAGAGGAAGTCGCTCGACGCCTGGAGCGTTACTTGGA 442
consensus_9480#3      -----TATTCTCCCAGTGGTGTTTATGTATATTTTTCAAAAGTTATGGGCGTCGTTTATA 349
                            *       *      *                        *   *        *

consensus_9480#0      C----ATCTTAANAACACTACTCACGTTTTTGAAATAGTTAACTCATTTGAAA-GCACAC 1177
consensus_9480#2      C----ATCTTAAAAACANTACTCACGTTTTTGAAANNNNNNNNNAAAA------------ 488
consensus_9480#1      CTCTGAGCTTGCAAA-GTTACTTGGGTTACGAAGAGTCCAGTTTAATGGCCGA-AATTGA 500
consensus_9480#3      -----AATTAACGCATCTTGTCAAAGTTTTTAGAAAAGCAATGACTTTTTGGACAACCGT 404
                           *  *     *   *      ***      *                         

consensus_9480#0      GCAAAGTTCCGGCCCACTTGTATGGCTGGAAAACCATAATTCCATGTATCGAATGGGAGT 1237
consensus_9480#2      ------------------------------------------------------------
consensus_9480#1      ACGACGAGTGGAGGCTGAACGTACTGAGGTATTACGTCGAAAGAGCTGAAGAAGCTGAAC 560
consensus_9480#3      TTTACAACTACAGAGAGATTTGTTTTATCAATTGTCCTGATAGTTTCAAATA-------- 456
                                                                                  

consensus_9480#0      GTACCTTGATCGGCTCGCCTCTATATAAAATTGCTCTATATTAAATCCACACCAAAAAAC 1297
consensus_9480#2      ------------------------------------------------------------
consensus_9480#1      GTAAAGCTAAAGAAGAAGCTGAGGGCATTG------------------------------ 590
consensus_9480#3      ------------------------------------------------------------
                                                                                  

consensus_9480#0      GGGGGATCGATTTCTACTTTTAGTATGGGCCCTACTTAAGATCCCTTTTAATTTCGACAA 1357
consensus_9480#2      ------------------------------------------------------------
consensus_9480#1      ------------------------------------------------------------
consensus_9480#3      ------------------------------------------------------------
                                                                                  

consensus_9480#0      AT 1359
consensus_9480#2      --
consensus_9480#1      --
consensus_9480#3      --