These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9508#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 468 fasta sequence [AATCATTAAAAAAGGCGCGATGAATGTTGGTAAGAGTTAATTTTTTTATTTCATAGTCAGCCTCTTCTTGTGCCCAAATCACAGCATCCAAATGGCCTGCATTGAGTTTTTTCATTGATTGTTCAAGGTCGATCACTGCACTAACCGGAAATCCCCAATCAACTGGTGGTGCTTCAATATTAAGATTTTTAGCTTTGTCGAGGTTGGCAATATCAGCTTTACTGACCTTATTTTTTTTATTGCTGTACACAACAAAAGTGACTCTCCCCAACGCTTCGCTGGAAAATTGCGTGGGCAGGGTGGCTTCCTGCGCATCGAGTATCTTTATAAAGTTTCCCTTTACCGGAGTCATATCCACCACCAATTGCACCGCCAACGCCAACTCCAAGCCCACCAACACCAGCTCCGGCACCGGCTTGACCAAACCAGCCACCTGTAACTCCGCCCCCATTGCCATTTTTC-TTGCAA] [+] EMBL CD144768 [AATCATTAAAAAAGGCGCGATGAATGTTGGTAAGAGTTAATTTTTTTATTTCATAGTCAGCCTCTTCTTGTGCCCAAATCACAGCATCCAAATGGCCTGCATTGAGTTTTTTCATTGATTGTTCAAGGTCGATCACTGCACTAACCGGAAATCCCCAATCAACTGGTGGTGCTTCAATATTAAGATTTTTAGCTTTGTCGAGGTTGGCAATATCAGCTTTACTGACCTTA TTTTTTTATTGCTGTACACAACAAAAGTGACTCTCCCCAACGCTTCGCTGGAAAATTGCGTGGGCAGGGTGGCTTCCTGCGCATCGAGTATCTTTATAAAGTTTCCCTTTACCGGAGTCATATCCACCACCAATTGCACCGCCAACGCCAACTCCAAGCCCACCAACACCAGCTCCGGCACCGGCTTGACCAAACCAGCCACCTGTAACTCCGCCCCCATTGCCATTTTTC TTGCAA] [+] EMBL CD144692 [AATCATTAAAAAAGGCGCGATGAATGTTGGTAAGAGTTAATTTTTTTATTTCATAGTCAGCCTCTTCTTGTGCCCAAATCACAGCATCCAAATGGCCTGCATTGAGTTTTTTCATTGATTGTTCAAGGTCGATCACTGCACTAACCGGAAATCCCCAATCAACTGGTGGTGCTTCAATATTAAGATTTTTAGCTTTGTCGAGGTTGGCAATATCAGCTTTACTGACCTTATTTTTTTTATTGCTGTACACAACAAAAGTGACTCTCCCCAACGCTTCGCTGGAAAATTGCGTGGGCAGGGTGGCTTCCTGCGCATCGAGTATCTTTATAAAGTTTCCCTTTACCGGAGTCATATCCACCACCAATTGCACCGCCAACGCCAACTCCAAGCCCACCAACACCAGCTCCGGCACCGGCTTGACCAAACCAGCCACCTGTAACTCCGCCCCCATAGCCATTTTTCTTTGCA ] [+] EMBL CD144688 [AATCATTAAAAAAGGCGCGATGAATGTTGGTAAGAGTTAATTTTTTTATTTCATAGTCAGCCTCTCCTTGTGCCCAAATCACAGCATCCAAATGGCCTGCATTGAGTTTTTTCATTGATTGTTCAAGGTCGATCACTGCACTAACCGGAAATCCCCAATCAACTGGTGGTGCTTCAATATTAAGATTTTTAGCTTTGTCGAGGTTGGCAATATCAGCTTTACTGACCTTATTTTTTTTATTGCTGTACACAACAAAAGTGACTCTCCCCAACGCTTCGCTGGAAAATTGCGTGGGCAGGGTGGCTTCCTGCGCATCGAGTATCTTTATAAAGTTTCCCTTTACCGGAGTCATATCCACCACCAATTGCACCGCCAACGCCAACTCCAAGCCCACCAACACCAGCTCCGGCACCGGCTTGACCAAACCAGCCACCTGTAACTCCGCCCCCATTGCCATTTTTC TTGCAA] [+] EMBL CD144832 [AATCATTAAAAAAGGCGCGATGAATGTTGGTAAGAGTTAATTTTTTTATTTCATAGTCAGCCTCTTCTTGTGCCCAAATCACAGCATCCAAATGGCCTGCATTGAGTTTTTTCATTGATTGTTCAAGGTCGATCACTGCACTAACCGGAAATCCCCAATCAACTGGTGGTGCTCCAATATTAAGATTTTTAGCTTTGTCGAGGTTGGCAATATCAGCTTTACTGACCTTATTTTTTTTATTGCTGTACACAACAAAAGTGACTCTCCCCAACGCTTCGCTGGAAAATTGCGTGGGCAGGGTGGCTTCCTGCGCATCGAGTATCTTTATAAAGTTTCCCTTTACCGGAGTCATATCCACCACCAATTGCACCGCCAACGCCAACTCCAAGCCCACCAACACCAGCTCCGGCACCGGCTTGACCAAACCAGCCACCTGTAACTCCGCCCCCATTGCCATTTTTC TTGCAA] [+] EMBL CD144829 [AATCATTAAAAAAGGCGCGATGAATGTTGGTAAGAGTTAATTTTTTTATTTCATAGTCAGCCTCTTCTTGTGCCCAAATCACAGCATCCAAATGGCCTGCATTGAGTTTTTTCATTGATTGTTCAAGGTCGATCACTGCACTAACCGGAAATCCCCAATCAACTGGTGGTGCTTCAATATTAAGATTTTTAGCTTTGTCGAGGTTGGCAATATCAGCTTTACTGACCTTATTTTTTTTATTGCTGTACACAACAAAAGTGACTCTCCCCAACGCTTCGCTGGAAAATTGCGTGGGCAGGGTGGCTTCCTGCGCATCGAGTATCTTTATAAAGTTTCCCTTTACCGGAGTCATATCCACCACCAATTGCACCGCCAACGCCAACTCCAAGCCCACCAACACCAGCTCCGGCACCGGCTTGACCAAACCAGCCACCTGTAACTCCGCCCNCATTGCCATTTTTC TTGCAA] [+] EMBL CD144822 [AATCATTAAAAAAGGCGCGATGAATGTTGGTAAGAGTTAATTTTTTTATTTCATAGTCAGCCTCTTCTTGTGCCCAAATCACAGCATCCAAATGGCCTGCATTGAGTTTTTTCATTGATTGTTCAAGGTCGATCACTGCACTAACCGGAAATCCCCAATCAACTGGTGGTGCTTCAATATTAAGATTTTTAGCTTTGTCGAGGTTGGCAATATCAGCTTTACTGACCTTATTTTTTTTATTGCTGTACACAACAAAAGTGACTCTCCCCAACGCTTCGCTGGAAAATTGCGTGGGCAGGGTGGCTTCCTGCGCATCGAGTATCTTTATAAAGTTTCCCTTTACCGGAGTCATATCCACCACCAATTGCACCGCCAACGCCAACTCCAAGCCCACCAACACCAGCTCCGGCACCGGCTTGACCAAACCAGCCACCTGTAACTCCGCCCCCATTGCCATTTTTC TTGCAA] [+] EMBL CD144774 [AATCATTAAAAAAGGCGCGATGAATGTTGGTAAGAGTTAATTTTTTTATTTCATAGTCAGCCTCTTCTTGTGCCCAAATCACAGCATCCAAATGGCCTGCATTGAGTTTTTTCATTGATTGTTCAAGGTCGATCACTGCACTAACCGGAAATCCCCAATCAACTGGTGGTGCTTCAATATTAAGATTTTTAGCTTTGTCGAGGTTGGCAATATCAGCTTTACTGACCTTATTTTTTTTATTGCTGTACACAACAAAAGTGACTCTCCCCAACGCTTCGCTGGAAAATTGCGTGGGCAGGGTGGCTTCCTGCGCATCGAGTATCTTTATAAAGTTTCCCTTTACCGGAGTCATATCCACCACCAATTGCACCGCCAACGCCAACTCCAAGCCCACCAACACCAGCTCCGGCACCGGCTTGACCAAACCAGCCACCTGTAACTCCGCCCCCATTGCCATTTTTC TTGCAA] [+] EMBL CD144799 [AATCATTAAAAAAGGCGCGATGAATGTTGGTAAGAGTTAATTTTTTTATTTCATAGTCAGCCTCTTCTTGTGCCCAAATCACAGCATCCAAATGGCCTGCATTGAGTTTTTTCATTGATTGTTCAAGGTCGATCACTGCACTAACCGGAAATCCCCAATCAACTGGTGGTGCTTCAATATTAAGATTTTTAGCTTTGTCGAGGTTGGCAATATCAGCTTTACTGACCTTATTTTTTTTATTGCTGTACACAACAAAAGTGACTCTCCCCAACGCTTCGCTGGAAAATTGCGTGGGCAGGGTGGCTTCCTGCGCATCGAGTATCTTTATAAAGTTTCCCTTTACCGGAGTCATATCCACCACCAATTGCACCGCCAACGCCAACTCCAAGCCCACCAACACCAGCTCCGGCACCGGCTTGACCAAACCAGCCACCTGTAACTCCGCCCCCATTGCCATTTTTC TTGCAA] [+] EMBL CD144715 [AATCATTAAAAAAGGCGCGATGAATGTTGGTAAGAGTTAATTTTTTTATTTCATAGTCAGCCTCTCCTTGTGCCCAAATCACAGCATCCAAATGGCCTGCATTGAGTTTTTTCATTGATTGTTCAAGGTCGATCACTGCACTAACCGGAAATCCCCAATCAACTGGTGGTGCTTCAATATTAAGATTTTTAGCTTTGTCGAGGTTGGCAATATCAGCTTTACTGACCTTATTTTTTTTATTGCTGTACACAACAAAAGTGACTCTCCCCAACGCTTCGCTGGAAAATTGCGTGGGCAGGGTGGCTTCCTGCGCATCGAGTATCTTTATAAAGTTTCCCTTTACCGGAGTCATATCCACCACCAATTGCACCGCCAACGCCAACTCCAAGCCCACCAACACCAGCTCCGGCACCGGCTTGACCAAACCAGCCACCTGTAACTCCGCCCNCATTGCCATTTTTC TTGCAA] [+] EMBL CD144765 [atTCATTAAAAAAGGCGCGATGAATGGTGCAAATAGTTAATTTTTTTATTTCATACCCAGCCTCTTCTTGTGCCCAAATCACAGCATCCAAATGGCCTGCATTGAATTTTTTCATTGATTGATCAAGGGCGATCACTGCACTAACCGGAAATCCCCAATCAACTGGTGGTGCTTCAATATTAAAATTCTTAACTTTGCCGAGGATGGCAATATCAACTTGACTGACCTTATTTTATTTATAGCTGGACACAACAAAAGTGACTCTCCCCAACGCTTCACTGGAAAATTGCGTGGGCAGGGTGGCTTCCTGCGCATCGAGTATCTTTATAAAGTTTCCCTTTACCGGAGTCATATCCACCACCAATTGCACCGCCAACGCCAACTCCAAGCCCACCAACACCAGCTCCGGCACCGGCTTGACCAAACCAGCCACCTGTAACTCCGCCCCCATTGCCATTTTTC TTGCAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||