cluster # 9519

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Schistosoma mansoni
cluster # 9519 cluster # 9519 Sequences # 10 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9519#0 length = 1164 sequences # 2
consensus_9519#1 length = 486 sequences # 5

consensus_9519#2 length = 408 sequences # 2
consensus_9519#3 length = 308 sequences # 1

consensusID : consensus_9519#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1164
fasta sequence

                              [AAATAAAAAAAAGAAGGTAAAAATAGCTGGCACCCCCACCCCAAACCCCCTTTACAACACATAGACAGACAGAAATTCATTTCTAACAAACATATGGCGTAAAGAAGAAGAAGAAGGGAAAAGGGGGGTTGTGTATTCAATAAAGTAATGGCAAGTTAACTCATTTAACAGTCTATATGCATATGGATATATATTTGATATTTAGGTAGGTATATGATATGAATGTCAGTGTGTATATATACATATACATACGCACTTACACACTGCACAACACACAAACATACATACACATATTTAGAAAGACAAAAAAAGCATATACATCTTTGGAACAATTAGGGTCATTGTGACCAAAAAAAGAAGAAAAACTATTCTAATCCATATACAACAGACATACATATTATCTAATTGCACAAACATACAACCCCCCCCCAAAAAAAAATGTAAAAAAAGCGTTGTTAATCTGTATTCAGAATGAATGAATGAATCAGTTAGCCAACAACAACAACAAAAAAACTCGAATGAAAAAGAGCAAAAAGAAAAAACACTGACGTTATTTCCCTCGTTTATAAAACATACTACTTATATTCCATCATTAGTAATGAATAAATAGNAGNAATCTATATATATATATATATATATATATATATATATATATATATATATATATAAAGTTATTAGAAAGAAAGGTGAGGGTGTATTAGTTCGTTAATTGATGGACATACAAACACACACATACACACGATACACATAGATTAAAGAAAGGCAGAAAAACAATCAATTGATCAATTCATCGATCGATCGATCAATTAATCAATCAATCAATAAAAAAAATCACTGAAGGATATGTCTTTATATTTCATTTGTCCAAGATGGATAGACAAACATATAAATGTATATGTGGTAATCTATATATATAATAAGAAAGACCAACACAAAGAGAGAGAGAGAGAGAGAAGAAACAAGAGAATAACCTAAAAAGATAGATGGATGGTAACAAACAACAACAACAACAAATTATGAAAGAAATGGATTATTATTAGTTGAACGATTAATTATCCCATTTAATGGAATAGAATGATTTAGAAATGATTGAGTTTGATATGGAATAGTAGACTGAGCTGACGCAGCCCATGGATTAGTGAATGAAGGAATCGCTCGGCGAAT]

[+] EMBL CD073652             [AAATAAAAAAAAGAAGGTAAAAATAGCTGGCACCCCCACCCCAAACCCCCTTTACAACACATAGACAGACAGAAATTCATTTCTAACAAACATATGGCGTAAAGAAGAAGAAGAAGGGAAAAGGGGGGTTGTGTATTCAATAAAGTAATGGCAAGTTAACTCATTTAACAGTCTATATGCATATGGATATATATTTGATATTTAGGTAGGTATATGATATGAATGTCAGTGTGTATATATACATATACATACGCACTTACACACTGCACAACACACAAACATACATACACATATTTAGAAAGACAAAAAAAGCATATACATCTTTGGAACAATTAGGGTCATTGTGACCAAAAAAAGAAGAAAAACTATTCTAATCCATATACAACAGACATACATATTATCTAATTGCACAAACATACAACCCCCCCCCAAAAAAAAATGTAAAAAAAGCGTTGTTAATCTGTATTCAGAATGAATGAATGAATCAGTTAGCCAACAACAACAACAAAAAAACTCGAATGAAAAAGAGCAAAAAGAAAAAACACTGACGTTATTTCCCTCGTTTATAAAACATACTACTTATATTCCATCATTAGTAATGAATAAATAGNAGNAATCTATATATATATATATATATATATATATATATATATATATATATATATATAAAGTTATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD079375             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAAAAGAGCAAAAAGAAAAAACNCTGACGTTATNTCCCTCGTTTATAAAACATACTACTTATATTCCATCATTAGTAATGAATAAATAGTAGTAATCTATATATATATATATATATATATATATATATATATATATATATATATATAAAGTTATTAGAAAGAAAGGTGAGGGTGTATTAGTTCGTTAATTGATGGACATACAAACACACACATACACACGATACACATAGATTAAAGAAAGGCAGAAAAACAATCAATTGATCAATTCATCGATCGATCGATCAATTAATCAATCAATCAATAAAAAAAATCACTGAAGGATATGTCTTTATATTTCATTTGTCCAAGATGGATAGACAAACATATAAATGTATATGTGGTAATCTATATATATAATAAGAAAGACCAACACAAAGAGAGAGAGAGAGAGAGAAGAAACAAGAGAATAACCTAAAAAGATAGATGGATGGTAACAAACAACAACAACAACAAATTATGAAAGAAATGGATTATTATTAGTTGAACGATTAATTATCCCATTTAATGGAATAGAATGATTTAGAAATGATTGAGTTTGATATGGAATAGTAGACTGAGCTGACGCAGCCCATGGATTAGTGAATGAAGGAATCGCTCGGCGAAT]




>consensus_9519#0
AAATAAAAAAAAGAAGGTAAAAATAGCTGGCACCCCCACCCCAAACCCCCTTTACAACAC
ATAGACAGACAGAAATTCATTTCTAACAAACATATGGCGTAAAGAAGAAGAAGAAGGGAA
AAGGGGGGTTGTGTATTCAATAAAGTAATGGCAAGTTAACTCATTTAACAGTCTATATGC
ATATGGATATATATTTGATATTTAGGTAGGTATATGATATGAATGTCAGTGTGTATATAT
ACATATACATACGCACTTACACACTGCACAACACACAAACATACATACACATATTTAGAA
AGACAAAAAAAGCATATACATCTTTGGAACAATTAGGGTCATTGTGACCAAAAAAAGAAG
AAAAACTATTCTAATCCATATACAACAGACATACATATTATCTAATTGCACAAACATACA
ACCCCCCCCCAAAAAAAAATGTAAAAAAAGCGTTGTTAATCTGTATTCAGAATGAATGAA
TGAATCAGTTAGCCAACAACAACAACAAAAAAACTCGAATGAAAAAGAGCAAAAAGAAAA
AACACTGACGTTATTTCCCTCGTTTATAAAACATACTACTTATATTCCATCATTAGTAAT
GAATAAATAGNAGNAATCTATATATATATATATATATATATATATATATATATATATATA
TATATATAAAGTTATTAGAAAGAAAGGTGAGGGTGTATTAGTTCGTTAATTGATGGACAT
ACAAACACACACATACACACGATACACATAGATTAAAGAAAGGCAGAAAAACAATCAATT
GATCAATTCATCGATCGATCGATCAATTAATCAATCAATCAATAAAAAAAATCACTGAAG
GATATGTCTTTATATTTCATTTGTCCAAGATGGATAGACAAACATATAAATGTATATGTG
GTAATCTATATATATAATAAGAAAGACCAACACAAAGAGAGAGAGAGAGAGAGAAGAAAC
AAGAGAATAACCTAAAAAGATAGATGGATGGTAACAAACAACAACAACAACAAATTATGA
AAGAAATGGATTATTATTAGTTGAACGATTAATTATCCCATTTAATGGAATAGAATGATT
TAGAAATGATTGAGTTTGATATGGAATAGTAGACTGAGCTGACGCAGCCCATGGATTAGT
GAATGAAGGAATCGCTCGGCGAAT

consensusID : consensus_9519#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 486
fasta sequence

                              [GAGAGAAGAAACAAGAGAATAACCTAAAAAGATAGATGGATGGTAACAAACAACAACAACAACAAATTATGAAAGAAATGGATTATTATTAGTTGAACGATTAATTATCCCATTTAATGGAATAGAATGATTTAGAAATGATTGAGTTTGATATGGAATAGTAGACTGAGCTGACGCAGCCCATGGATTAGTTGAATTGAATGGAATCGAAGCAGTTGGTTGATGATTAATACTAACTTGACCTATTATTTGATTCAAAGAAGGTGATTGATGAATATTTGAAACTCTTGACATTTGTTGATTAGATACCGTTGAAACTTGAGCACATGGCATAGTTCCAGACCAATTGATTGCAGATAAACTTCCATCAGGAGCACGATAAATAAGACCAGCTTGTGGAGATGAATAACTATCACAAATAGACAAATTTCCAGCTATTTGAGCAATTTTATCGTCTAATGAAATTAATGATTTTGACGGAACAGT]

[+] EMBL CD197225             [GAGAGAAGAAACAAGAGAATAACCTAAAAAGATAGATGGATGGTAACAAACAACAACAACAACAAATTATGAAAGAAATGGATTATTATTAGTTGAACGATTAATTATCCCATTTAATGGAATAGAATGATTTAGAAATGATTGAGTTTGATATGGAATAGTAGACTGAGCTGACGCAGCCCATGGATTAGTTGAATTGAATGGAATCGAAGCAGTTGGTTGATGATTAATACTAACTTGACCTATTATTTGATTCAAAGAAGGTGATTGATGA                                                                                                                                                                                                                    ]
[+] EMBL CD140709             [  GAGAAGAAACAAGAGAATAACCTAAAAAGATAGATGGATGGTAACAAACAACAACAACAACAAATTATGAAAGAAATGGATTATTATTAGTTGAACGATTAATTATCCCATTTAATGGAATAGAATGATTTAGAAATGATTGAGTTTGATATGGAATAGTAGACTGAGCTGACGCAGCCCATGGATTAGTTGAATTGAATGGAATCGAAGCAGTTGGTTGATGATTAATACTAACTTGACCTATTATTTGATTCAAAGAAGGTGATTGATGA                                                                                                                                                                                                                    ]
[-] EMBL CD197176             [                           AAAGATAGATGGATGGTAACAAACAACAACAACAACAAATTATGAAAGAAATGGATCATTATTAGTTGAACGATTAATTATCCCATTTAATGGAATAGAATGATTTAGAAATGATTGAGTTTGATATGGAATAGTAGACTGAGCTGACGCAGCCCATGGATTAGTTGAATTGAATGGAATCGAAGCAGTTGGTTGATGATTAATACTAACTTGACCTATTATTTGATTCAAAGAAGGTGATTGATGAA                                                                                                                                                                                                                   ]
[+] EMBL CD179178             [                                                    ACAGCAACAACAAATTATGAAAGAAATGGATTATTATTAGTTGAACGATTAATTATCCCATTTAATGGAATAGAATGATTTAGAAATGATTGAGTTTGATATGGAATAGTAGACTGAGCTGACGCAGCCCATGGATTAGTTGAATTGAATGGAATCGAAGCAGTTGGTTGATGATTAATACTAACTTGACCTATTATTTGATTCAAAGAAGGTGATTGATGAATATTTGAAACTCTTGACATTTGTTGATTAGATACCGTTGAAACTTGAGCACATGGCATAGTTCCAGACCAATTGATTGCAGATAAACTTCCATCAGGAGCACGATAAATAAGACCAGCTTGTGGAGATGAATAACTATCACAAATAGACAAATTTCCA                                                     ]
[-] EMBL CD141236             [                                                                                                                                                                                               tgaAATTGAATGGAATCGAAGCAGTTNGGCGATGATTAATACCAACTTGACCTATTATNTGATTCAAAGAAGGTGATTGATGAACATTTGAAACTCTTGACATTTGTTGATTAGATACCGTTGAAACTTGAACACATGGCATAGTTCCAGACCAATTGATTGCAGATAAACTTCCATCAGGAGCACGATAAATACGACCAGCTTGTGTAGATGAAAAACTATCACAAATAGACAAATTTCCAGCTATTTGAGCAATTTTATCGTCTAATGAAATTAATGATTTTGACGGAACAGT]




>consensus_9519#1
GAGAGAAGAAACAAGAGAATAACCTAAAAAGATAGATGGATGGTAACAAACAACAACAAC
AACAAATTATGAAAGAAATGGATTATTATTAGTTGAACGATTAATTATCCCATTTAATGG
AATAGAATGATTTAGAAATGATTGAGTTTGATATGGAATAGTAGACTGAGCTGACGCAGC
CCATGGATTAGTTGAATTGAATGGAATCGAAGCAGTTGGTTGATGATTAATACTAACTTG
ACCTATTATTTGATTCAAAGAAGGTGATTGATGAATATTTGAAACTCTTGACATTTGTTG
ATTAGATACCGTTGAAACTTGAGCACATGGCATAGTTCCAGACCAATTGATTGCAGATAA
ACTTCCATCAGGAGCACGATAAATAAGACCAGCTTGTGGAGATGAATAACTATCACAAAT
AGACAAATTTCCAGCTATTTGAGCAATTTTATCGTCTAATGAAATTAATGATTTTGACGG
AACAGT

consensusID : consensus_9519#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 408
fasta sequence

                              [AGAGAAGAAACAAGAGAATAACCTAAAAAGATAGATGGATGGTAACAAACAACAACAACAACAAATTATGAAAGAAATGGATTATTATTAGTTGAACGATTAATTATCCCATTTAATGGAATAGAATGATTTAGAAATGATTGAGTTTGATATGGAATCTATAGAAATATAAACGAAATGAAAAAAAATTGAAAACTATGGATTATATAATAATAATACTGTGTATAGCTAAGGTTTATTAAAGCCTTGATCATACAAAAATTCAAACCCCCTCTTTGTGTGTGTGTGGGGTTAATGTCCCCCTTTATGTATTCAAAAAAAGGTTTGTTCCAGAGTGGTTAGGTGTCAAATATCATATGCTCATTAGTGACTGACTTTCAAGATACATGGTCCTGGAGTTCTAAAGAG]

[-] EMBL CD170938             [AGAGAAGAAACAAGAGAATAACCTAAAAAGATAGATGGATGGTAACAAACAACAACAACAACAAATTATGAAAGAAATGGATTATTATTAGTTGAACGATTAATTATCCCATTTAATGGAATAGAATGATTTAGAAATGATTGAGTTTGATATGGAATCTATAGAAATATAAACGAAATGAAAAAAAATTGAAAACTATGGATTATATAATAATAATACTGTGTATAGCTAAGGTTTATTAAAGCCTTGATCATACAAAAATTCAAACCCCCTCTTTGTGTGTGTGTGGGGTTAATGTCCCCCTTTATGTATTCAAAAAAAGGTTTGTTCCAGAGTGGTTAGGTGTCAAATATCATATGCTCATTAGTGACTGACTTTCAAGATACATGGTCCTGGAGTTCTAAAGAG]
[-] EMBL CD170954             [AGAGAAGAAACAAGAGAATAACCTAAAAAGATAGATGGATGGTAACAAACTACAACAACTACAAATTATGAAAGAAATGGATTATTATTAGTTGAACGATTAATTATCCCATTTAATGGAATAGAATGATTTAGAAATGATTGAGTTTGATATGGAATCTATAGAAATATAAACGAAATGAAAAAAAATTGAAAACTATGGATTATATAATAATAATACTGTGTATAGCTAAGGTTTATTAAAGCCTTGATCATACAAAAATTCTAACCCCCTCTTTGTGTGTGTGTGGGGTTAATGTCCCCCTTTATGTATTCAAAAAAAGGTTTGTTCCAGAGTGGTTAGGTGTCAAATATCATATGCTCATTAGTGACTGACTTTCAAGATACATGGTCCTGGAGTTCTAAAGAG]




>consensus_9519#2
AGAGAAGAAACAAGAGAATAACCTAAAAAGATAGATGGATGGTAACAAACAACAACAACA
ACAAATTATGAAAGAAATGGATTATTATTAGTTGAACGATTAATTATCCCATTTAATGGA
ATAGAATGATTTAGAAATGATTGAGTTTGATATGGAATCTATAGAAATATAAACGAAATG
AAAAAAAATTGAAAACTATGGATTATATAATAATAATACTGTGTATAGCTAAGGTTTATT
AAAGCCTTGATCATACAAAAATTCAAACCCCCTCTTTGTGTGTGTGTGGGGTTAATGTCC
CCCTTTATGTATTCAAAAAAAGGTTTGTTCCAGAGTGGTTAGGTGTCAAATATCATATGC
TCATTAGTGACTGACTTTCAAGATACATGGTCCTGGAGTTCTAAAGAG

consensusID : consensus_9519#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 308
fasta sequence

                              [ATCACAAGAGCATGCAACAAATCACAAGAGAATAACCTAAAAAGATAGATGGATGGTAACAAACAACAACAACATCAAATTATGAAAGAAATGGATTATTATTAGTTGAACGATTAATTATCCCATTTAATGGAATAGAATGATTTAGAAATGATTGAGTTTGATATGGAATAGTAGACTGAGCTGACGCAGCCCATGGATTAGTTGAATTGAATGGAATCGAAGCAGTTGGTTGATGATTAATACTAACTTGACCTATTATTTAATTCAAAGAAGGTGATTGATGAATATTTGAAACTCTTGTGATT]

[-] EMBL CD197372             [ATCACAAGAGCATGCAACAAATCACAAGAGAATAACCTAAAAAGATAGATGGATGGTAACAAACAACAACAACATCAAATTATGAAAGAAATGGATTATTATTAGTTGAACGATTAATTATCCCATTTAATGGAATAGAATGATTTAGAAATGATTGAGTTTGATATGGAATAGTAGACTGAGCTGACGCAGCCCATGGATTAGTTGAATTGAATGGAATCGAAGCAGTTGGTTGATGATTAATACTAACTTGACCTATTATTTAATTCAAAGAAGGTGATTGATGAATATTTGAAACTCTTGTGATT]




>consensus_9519#3
ATCACAAGAGCATGCAACAAATCACAAGAGAATAACCTAAAAAGATAGATGGATGGTAAC
AAACAACAACAACATCAAATTATGAAAGAAATGGATTATTATTAGTTGAACGATTAATTA
TCCCATTTAATGGAATAGAATGATTTAGAAATGATTGAGTTTGATATGGAATAGTAGACT
GAGCTGACGCAGCCCATGGATTAGTTGAATTGAATGGAATCGAAGCAGTTGGTTGATGAT
TAATACTAACTTGACCTATTATTTAATTCAAAGAAGGTGATTGATGAATATTTGAAACTC
TTGTGATT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9519#1      ------------------------------------------------------------
consensus_9519#3      ------------------------------------------------------------
consensus_9519#0      AAATAAAAAAAAGAAGGTAAAAATAGCTGGCACCCCCACCCCAAACCCCCTTTACAACAC 60
consensus_9519#2      ------------------------------------------------------------
                                                                                  

consensus_9519#1      ------------------------------------------------------------
consensus_9519#3      ------------------------------------------------------------
consensus_9519#0      ATAGACAGACAGAAATTCATTTCTAACAAACATATGGCGTAAAGAAGAAGAAGAAGGGAA 120
consensus_9519#2      ------------------------------------------------------------
                                                                                  

consensus_9519#1      ------------------------------------------------------------
consensus_9519#3      ------------------------------------------------------------
consensus_9519#0      AAGGGGGGTTGTGTATTCAATAAAGTAATGGCAAGTTAACTCATTTAACAGTCTATATGC 180
consensus_9519#2      ------------------------------------------------------------
                                                                                  

consensus_9519#1      ------------------------------------------------------------
consensus_9519#3      ------------------------------------------------------------
consensus_9519#0      ATATGGATATATATTTGATATTTAGGTAGGTATATGATATGAATGTCAGTGTGTATATAT 240
consensus_9519#2      ------------------------------------------------------------
                                                                                  

consensus_9519#1      ------------------------------------------------------------
consensus_9519#3      ------------------------------------------------------------
consensus_9519#0      ACATATACATACGCACTTACACACTGCACAACACACAAACATACATACACATATTTAGAA 300
consensus_9519#2      ------------------------------------------------------------
                                                                                  

consensus_9519#1      ------------------------------------------------------------
consensus_9519#3      ------------------------------------------------------------
consensus_9519#0      AGACAAAAAAAGCATATACATCTTTGGAACAATTAGGGTCATTGTGACCAAAAAAAGAAG 360
consensus_9519#2      ------------------------------------------------------------
                                                                                  

consensus_9519#1      ------------------------------------------------------------
consensus_9519#3      ------------------------------------------------------------
consensus_9519#0      AAAAACTATTCTAATCCATATACAACAGACATACATATTATCTAATTGCACAAACATACA 420
consensus_9519#2      ------------------------------------------------------------
                                                                                  

consensus_9519#1      ------------------------------------------------------------
consensus_9519#3      ------------------------------------------------------------
consensus_9519#0      ACCCCCCCCCAAAAAAAAATGTAAAAAAAGCGTTGTTAATCTGTATTCAGAATGAATGAA 480
consensus_9519#2      ------------------------------------------------------------
                                                                                  

consensus_9519#1      ------------------------------------------------------------
consensus_9519#3      ------------------------------------------------------------
consensus_9519#0      TGAATCAGTTAGCCAACAACAACAACAAAAAAACTCGAATGAAAAAGAGCAAAAAGAAAA 540
consensus_9519#2      ------------------------------------------------------------
                                                                                  

consensus_9519#1      --------------------------------------------------------GAGA 4
consensus_9519#3      -------------------------------------------ATCACAAGAGCATGCAA 17
consensus_9519#0      AACACTGACGTTATTTCCCTCGTTTATAAAACATACTACTTATATTCCATCATTAGTAAT 600
consensus_9519#2      ---------------------------------------------------------AGA 3
                                                                                  

consensus_9519#1      GAAGAAACAAGAGAATAACCTAAAAAGATAGATGGATGGTAACAAACAACAACAACAACA 64
consensus_9519#3      CAAATCACAAGAGAATAACCTAAAAAGATAGATGGATGGTAACAAACAACAACAACATCA 77
consensus_9519#0      GAATAAATAGNAGNA--ATCTATATATATATATATATATATATATATATATATATATATA 658
consensus_9519#2      GAAGAAACAAGAGAATAACCTAAAAAGATAGATGGATGGTAACAAACAACAACAACAACA 63
                       **   * *  ** *  * *** * * *** **  **    * * * *   * *     *

consensus_9519#1      AATTATGAAAGAAATGGATTATTATTAGTTGAACGATTAATTATCCCATTTAATG--GAA 122
consensus_9519#3      AATTATGAAAGAAATGGATTATTATTAGTTGAACGATTAATTATCCCATTTAATG--GAA 135
consensus_9519#0      TAT-ATATATAAAGTTATTAGAAAGAAAGGTGAGGGTGTATTAGTTCGTTAATTGATGGA 717
consensus_9519#2      AATTATGAAAGAAATGGATTATTATTAGTTGAACGATTAATTATCCCATTTAATG--GAA 121
                       ** **  *  ** *   *    *  *     * * *  ****   * ** * **  * *

consensus_9519#1      TAGAATGATTTAGAAATGATTGAGTTTGATATGGAATAGTAGACTGAGCTGACGCAGCCC 182
consensus_9519#3      TAGAATGATTTAGAAATGATTGAGTTTGATATGGAATAGTAGACTGAGCTGACGCAGCCC 195
consensus_9519#0      CATACAAACACACACATACACACGATACACATAGATTAAAGAAAGGCAGAAAAACAATCA 777
consensus_9519#2      TAGAATGATTTAGAAATGATTGAGTTTGATATGGAATCTATAGAAATATAAACGAAATGA 181
                       * *   *   * * **      * *  * ** ** *              *   *    

consensus_9519#1      ATGGATTAGTTGA---ATTGAATGGA-ATCGAAGCAGTTGGTTGATGATTAATACTA--- 235
consensus_9519#3      ATGGATTAGTTGA---ATTGAATGGA-ATCGAAGCAGTTGGTTGATGATTAATACTA--- 248
consensus_9519#0      ATTGATCAATTCATCGATCGATCGATCAATTAATCAATCAATCAATAAAAAAAATCACTG 837
consensus_9519#2      AAAAA--AATTGA--AAACTATGGATTATATAA-TAAT--AATACTGTGTATAGCTA--- 231
                      *   *  * ** *   *   *  *   *   **  * *       *    *     *   

consensus_9519#1      ----ACTTGACCTATTATTTGATTCAAAGAAGGTG-ATTGATGAATATTTGAAACTCT-T 289
consensus_9519#3      ----ACTTGACCTATTATTTAATTCAAAGAAGGTG-ATTGATGAATATTTGAAACTCT-T 302
consensus_9519#0      AAGGATATGTCTTTATATTTCATTTGTCCAAGATGGATAGACAAACATATAAATGTATAT 897
consensus_9519#2      ----AGGTTTATTAAAGCCTTGATCATACAAAAATTCAAACCCCCTCTTTGTGTGTGTGT 287
                          *  *    *      *   *     **                * *     * * *

consensus_9519#1      GACATTTGTTGATTAGATACCGTTGAAACTTGAGCACATGGCATAGTTCCAGACCAATTG 349
consensus_9519#3      GTGATT------------------------------------------------------ 308
consensus_9519#0      GTGGTAATCTATATATATAATAA-GAAAGACCAACACAAAG-AGAGAGAGAGAGAGAGAA 955
consensus_9519#2      GGGGTTAATGTCCCCCTTTATGT----------ATTCAAAAAAAGGTTTGTTCCAGAGTG 337
                      *   *                                                       

consensus_9519#1      ATTGCAGATAAACTTCCATCAGGAGCACGATAAATAA-GACCAGCTTGTGGAGATGAATA 408
consensus_9519#3      ------------------------------------------------------------
consensus_9519#0      GAAACAAGAGAATAACC-TAAAAAGATAGATGGATGG-TAACAAACAACAACAACAACAA 1013
consensus_9519#2      GTTAGGTGTCAAATATCATATGCTCATTAGTGACTGACTTTCAAGATACATGGTCCTGGA 397
                                                                                  

consensus_9519#1      ACTATCACAAATAGACAA-ATTTCCAGCTATTTGAGCAATTTTATCGTCTAATGAAATT- 466
consensus_9519#3      ------------------------------------------------------------
consensus_9519#0      ATTATGAAAGAAATGGATTATTATTAGTTGAACGATTAATTATCCCATTTAATGGAATAG 1073
consensus_9519#2      GTTCTAAAGAG------------------------------------------------- 408
                                                                                  

consensus_9519#1      AATGATTTTGACGGAACAGT---------------------------------------- 486
consensus_9519#3      ------------------------------------------------------------
consensus_9519#0      AATGATTTAGAAATGATTGAGTTTGATATGGAATAGTAGACTGAGCTGACGCAGCCCATG 1133
consensus_9519#2      ------------------------------------------------------------
                                                                                  

consensus_9519#1      -------------------------------
consensus_9519#3      -------------------------------
consensus_9519#0      GATTAGTGAATGAAGGAATCGCTCGGCGAAT 1164
consensus_9519#2      -------------------------------