cluster # 9549

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Schistosoma mansoni
cluster # 9549 cluster # 9549 Sequences # 10 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9549#0 length = 1222 sequences # 8

consensus_9549#1 length = 640 sequences # 1
consensus_9549#2 length = 101 sequences # 1

consensusID : consensus_9549#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1222
fasta sequence

                              [TATGTCTTTCATCCTACCGACTTTATTGTTCCCATGTGTTCTTTTTCACGTTTGACAACCTCTTTTCTCATCCCGTTTTTATCAAAACTATTAATCTATACATATGATATGTGTATCATTTCTTCTCATTCCCACATGTTCATCACAATTATTCTGTTATTATTCCTGTTCTGTGTATTAATTCTTTTACAATGACAATGGATGTGGCAAAAATTGTTTAACAAAAAGCAATTTATTTTTCTTTGTTTTGTCGATTAGTTTCTGTGATCAGGTTCTTTCTTAATCATTGTTTGTATATAACTAACAATGTAAAATCTCCTGATTTCAGCATCTCGTTTGTCTAATCAGTGAGCACTTAATAAAACAAAAGATAATAATATGTCTAGAGGTAGAGAAATTATTATTAGTGTGGTTTACAAAAATG-AAAAGACATCTATTATACACTGATGAATAACTCAACTGTTCACAATTTCACAGAATGTCTAGAATGTTTGTTGCAACTACTATGTCCTCACTTCATTATTTACACGTCTGTTGTTTATTTATTAGAAAATTTTTTAAAACTCTGTTGTATGCGTTTATGTACGTGACAGACAAATAAAATTTGCATATTCAACCTCTACATAATCAAAAGACCATGCATATGCACATTTTTGTGTAACTTCCTTTAATCTATCTTATTATTAGACTGAATAACCTTATAATCACTAAAGATATTTGCATTCTGATGCAACAACTCTTTTCATCTTTACTCTTATCAACACAGTATACATTTTTCCTGGAGTGTGATGTTCATAAGTTACTTATCTATCGATTTCCGTTTTATTCGTCTATATAAATCTATTTCATACTATTATATTGTTTACTGTTTTTATAATTTATCTTATCCGTGACCTGCATTCCTATTATCTTGGAGCACTTTTCATTCGCTTAACGTGAGTTCCTTCTGTCGAGGTTGTTACCCTTTTCCTTCCTTGATATCATTTACACATTCCTATCTACTTTTGTGATTAAGCTTACAGTGCTCAACCAGAAATGCAAATTCATAAACTTTATGTTCTGTTACAGNNATCTCTTGNGATTATTTTAGNTCTGGTTTTCTGCATCTGGTACTTGTCAGATTCTGTGACGCTTACTTTTTCTGCTATTGCCACAGCAGTACACTGCATATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNTTTATTTAAAGTTGCCT]

[+] EMBL CD079939             [TATGTCTTTCATCCTACCGACTTTATTGTTCCCATGTGTTCTTTTTCACGTTTGACAACCTCTTTTCTCATCCCGTTTTTATCAAAACTATTAATCTATACATATGATATGTGTATCATTTCTTCTCATTCCCACATGTTCATCACAATTATTCTGTTATTATTCCTGTTCTGTGTATTAATTCTTTTACAATGACAATGGATGTGGCAAAAATTGTTTAACAAAAAGCAATTTATTTTTCTTTGTTTTGTCGATTAGTTTCTGTGATCAGGTTCTTTCTTAATCATTGTTTGTATATAACTAACAATGTAAAATCTCCTGATTTCAGCATCTCGTTTGTCTAATCAGTGAGCACTTAATAAAACAAAAGATAATAATATGTCTAGAGGTAGAGAAATTATTATTAGTGTGGTTTACAAAAATG AAAAGACATCTATTATACACTGATGAATAACTCAACTGTTCACAATTTCACAGAATGTCTAGAATGTTTGTTGCAACTACTATGTCCTCACTTCATTATTTACACGTCTGTTGTTTATTTATTAGAAAATTTTTTAAAACTCTGTTGTATGCGTTTATGTACGTGACAGACAAAATAAATTTGCATATTCAACCTCTACATAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD201793             [                                                                                   AAAACTATTAATCTATACATATGTTATGTGTATCATTTCTTCTCATTCCCACATGTTCATCACAATTATTCTGTTATTATTCCTGTTCTGTGTATTAATTCTTTTACAATGACAATGGATGTGGCAAAAATTGTTTAACAAAAAGCAATTTATTTTTCTTTGTTTTGTCGATTAGTTTCTGTGATCAGGTTCTTTCTTAATCATTGTTTGTATATAACTAACAATGTAAAATCTCCTGATTTCAGCATCTCGTTTGTCTAATCAGTGAGCACTTAATAAAACAAAAGATAATAATATGTCTAGAGGTAGAGAAATTATTATTAGTGTGGTTTACAAAAATG AAAAGACATCTATTATACACTGATGAATAACTCAACTGTTCACAATTTCACAGAATGTCTAGAATGTTTGTTGCAACTACTATGTCCTCACTTCATTATTTACACGTCTGTTGTTTATTTATTAGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD156488             [                                                                                         ATTAATCTATACATATGATATGTGTATCATTTCTTCTCATTCCCACATGTTCATCACAATTATTCTGTTATTATTCCTGTTCTGTGTATTAATTCTTTTACAATGACAATGGATGTGGCAAAAATTGTTTAACAAAAAGCAATTTATTTTTCTTTGTTTTGTCGATTAGTTTCTGTGATCAGGTTCTTTCTTAATCATTGTTTGTATATAACTAACAATGTAAAATCTCCTGATTTCAGCATCTCGTTTGTCTAATCAGTGAGCACTTAATAAAACAAAAGATAATAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD080780             [                                                                                                                                                                                                                                                                                                                                           ggtacgaggCTAATCAGTGAGCACTTAATAAAACAAAAGATAATAATATGTCTAGAGGTCGAGAAATTATTATTAGTGTGGTTTACAAAAATG AAAAGACATCTATTATACACTGATGAATAACTCAACTGTTCACAATTTCACAGAATGTCTAGAATGTTTGTTGCAACTACTATGTCCTCACTTCATTATTTACACGTCTGTTGTTTATTTATTAGAAAATTTTTTAAAACTCTGTTGTATGCGTTTATGTACGTGACAGACAAATAAAATTTGCATATTCAACCTCTACATAATCAAAAGACCATGCATATGCACATTTTTGTGTAACTTCCTTTAATCTATCTTATTATTAGACTGAATAACCTTATAATCACTAAAGATATTTGCATTCTGATGCAACAACTCTTTTCATCTTTACTCTTATCAACACAGTATACATTTTTCCTGGAGTGTGATGTTCATAAGTTACTTATCTATCGATTTCCGTTTTATTCGTCTATATAAATCTATTTCATACTATTATATTGTTTACTGTTTTTATAATTTATCTTATCCGTGACCTGCATTCCTATTATCTTGGAGCACTTTTCATTCGCTTAACGTGAGTTCCTTCTGTCGAGGTTGTTACCCTTTTCCTTCCTTGATATCATTTACACATTCCTATCTACTTTTGTGATTAAGCTTACAGTGCTCAACCAGAAATGCAAATTCATAAACTTTATGTTCTGTTACAGNNATCTCTTGNGATTATTTTAGNTCTGGTTTTCTGCATCTGGTACTTGTCAGATTCTGTGACGCTTACTTTTTCTGCTATTGCCACAGCAGTACACTGCATATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNTTTATTTAAAGTTGCCT]
[+] EMBL SMAA98630            [                                                                                                                                                                                                                                                                                                                                                                     AATAAAAGCGA  ATAATAATATGTCT  AGGTAGAGAAATTATTATTAGTGTGGTTTACAAAAATGCAAAAGACATCTATTATACACTGATGAATAACTCAACTGTTCATAATTTCACAGAATGTCTAGAATGc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD147121             [                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATGAATAACTCAACTGTTCACAATTTCACAGAATGTCTAGAATGTTTGTTGCAACTACTATGTCCTCACTTCATTATTTACACGTCTGTTGTTTATTTATTAGAAAATTTTTTAAAACTCTGTTGTATGCGTTTATGTACGTGACAGACAAATAAAATTTGCATATTCAACCTCTACATAATCAAAAGACCATGCATATGCACATTTTTGTGTAACTTCCTTTAATCTATCTTATTATTAGACTGAATAACCTTATAATCACTAAAGATATTTGCATTCTGATGCAACAACTCTTTTCATCTTTACTCTTATCAACACAGTATACATTTTTCCTGGAGTGTGATGTTCATAAGTTACTTATCTATCGATTTCCGTTTTATTCGTCTATATAAATCTATTTCATACTATTATATTGTTTACTGTTTTTATAATTTATCTTATCCGTGACCTGCATTCCTATTATCTTGGAGCACTTTTCATTCGCTTAACGTGAGTTCCTTCTGTCGAGGTTGTTACCCTTTTCCTTCCTT                                                                                                                                                                                                                                                      ]
[+] EMBL CD147038             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGAATAACTCAACTGTTCACAATTTCACAGAATGTCTAGAATGTTTGTTGCAACTACTATGTCCTCACTTCATTATTTACACGTCTGTTGTTTATTTATTAGAAAATTTTTTAAAACTCTGTTGTATGCGTTTATGTACGTGACAGACAAATAAAATTTGCATATTCAACCTCTACATAATCAAAAGACCATGCATATGCACATTTTTGTGTAACTTCCTTTAATCTATCTTATTATTAGACTGAATAACCTTATAATCACTAAAGATATTTGCATTCTGATGCAACAACTCTTTTCATCTTTACTCTTATCAACACAGTATACATTTTTCCTGGAGTGTGATGTTCATAAGTTACTT                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BF440135             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACAATTTCACAGAATGTCTAGAATGTTTGTTGCAACTACTATGTCCTCACTTCATTATTTACACGTCTGTTGTTTATTTATTAGAAAATTTTTTAAAACTCTGTTGTATGCGTTTATGTACGTGACAGACAAATAAAATTTGCATATTCAACCTCTACATAATC AANGACCANGCATnngc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]




>consensus_9549#0
TATGTCTTTCATCCTACCGACTTTATTGTTCCCATGTGTTCTTTTTCACGTTTGACAACC
TCTTTTCTCATCCCGTTTTTATCAAAACTATTAATCTATACATATGATATGTGTATCATT
TCTTCTCATTCCCACATGTTCATCACAATTATTCTGTTATTATTCCTGTTCTGTGTATTA
ATTCTTTTACAATGACAATGGATGTGGCAAAAATTGTTTAACAAAAAGCAATTTATTTTT
CTTTGTTTTGTCGATTAGTTTCTGTGATCAGGTTCTTTCTTAATCATTGTTTGTATATAA
CTAACAATGTAAAATCTCCTGATTTCAGCATCTCGTTTGTCTAATCAGTGAGCACTTAAT
AAAACAAAAGATAATAATATGTCTAGAGGTAGAGAAATTATTATTAGTGTGGTTTACAAA
AATGAAAAGACATCTATTATACACTGATGAATAACTCAACTGTTCACAATTTCACAGAAT
GTCTAGAATGTTTGTTGCAACTACTATGTCCTCACTTCATTATTTACACGTCTGTTGTTT
ATTTATTAGAAAATTTTTTAAAACTCTGTTGTATGCGTTTATGTACGTGACAGACAAATA
AAATTTGCATATTCAACCTCTACATAATCAAAAGACCATGCATATGCACATTTTTGTGTA
ACTTCCTTTAATCTATCTTATTATTAGACTGAATAACCTTATAATCACTAAAGATATTTG
CATTCTGATGCAACAACTCTTTTCATCTTTACTCTTATCAACACAGTATACATTTTTCCT
GGAGTGTGATGTTCATAAGTTACTTATCTATCGATTTCCGTTTTATTCGTCTATATAAAT
CTATTTCATACTATTATATTGTTTACTGTTTTTATAATTTATCTTATCCGTGACCTGCAT
TCCTATTATCTTGGAGCACTTTTCATTCGCTTAACGTGAGTTCCTTCTGTCGAGGTTGTT
ACCCTTTTCCTTCCTTGATATCATTTACACATTCCTATCTACTTTTGTGATTAAGCTTAC
AGTGCTCAACCAGAAATGCAAATTCATAAACTTTATGTTCTGTTACAGNNATCTCTTGNG
ATTATTTTAGNTCTGGTTTTCTGCATCTGGTACTTGTCAGATTCTGTGACGCTTACTTTT
TCTGCTATTGCCACAGCAGTACACTGCATATTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NANNNTTTATTTAAAGTTGCCT

consensusID : consensus_9549#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 640
fasta sequence

                              [TTTCCTGGAGTGTGATGTTCATAAGTTACTTATCTATCGATTTCCGTTTTATTCGTCTATATAAATCTATTTCACACTATTATATTGTTTACTGTTTTTATAATTTATTTTATCCGTGACCTGCATTCCTATTATCTTGGAGCACTTTTCATTCGCTTAACGTGAGTTCCTTCTGTCGAGGTTGTTACCCTTTTCCTTCCTTGATATCATTTACACATTCCTATCTACTTTTGTGATTAAGCTTACAGTGCTCAACCAAGAAATGCAAATTTCATAAACCTTTATGTTCTGTTTACAGTATCTCTTTGTGTATTATTTTAGTTCTGGTTTTTCTGTCATCTGTGTACTTGTTCAGATTTCTGTGAACGCTTTACTTTTTTCTGCTTATATGCACACAGGCAGTACAGCTGCATATATATATATATATATATATATATATATATATATATATATAATTATTTATTTATAAGGTATGCATAATTAATCTTCCTAGATAATATTTATTTTAAAATTTTACTGTCGACAAAATGTGTGGAAAAGTATCTTAGTTAACTATTTATTTGCTCATTGTTCTGGTCTGTCTACTAGATGTTGCACCCAATATATATATATATATATATATATATATATATATATAATT]

[-] EMBL CD074136             [TTTCCTGGAGTGTGATGTTCATAAGTTACTTATCTATCGATTTCCGTTTTATTCGTCTATATAAATCTATTTCACACTATTATATTGTTTACTGTTTTTATAATTTATTTTATCCGTGACCTGCATTCCTATTATCTTGGAGCACTTTTCATTCGCTTAACGTGAGTTCCTTCTGTCGAGGTTGTTACCCTTTTCCTTCCTTGATATCATTTACACATTCCTATCTACTTTTGTGATTAAGCTTACAGTGCTCAACCAAGAAATGCAAATTTCATAAACCTTTATGTTCTGTTTACAGTATCTCTTTGTGTATTATTTTAGTTCTGGTTTTTCTGTCATCTGTGTACTTGTTCAGATTTCTGTGAACGCTTTACTTTTTTCTGCTTATATGCACACAGGCAGTACAGCTGCATATATATATATATATATATATATATATATATATATATATATAATTATTTATTTATAAGGTATGCATAATTAATCTTCCTAGATAATATTTATTTTAAAATTTTACTGTCGACAAAATGTGTGGAAAAGTATCTTAGTTAACTATTTATTTGCTCATTGTTCTGGTCTGTCTACTAGATGTTGCACCCAATATATATATATATATATATATATATATATATATATAATT]




>consensus_9549#1
TTTCCTGGAGTGTGATGTTCATAAGTTACTTATCTATCGATTTCCGTTTTATTCGTCTAT
ATAAATCTATTTCACACTATTATATTGTTTACTGTTTTTATAATTTATTTTATCCGTGAC
CTGCATTCCTATTATCTTGGAGCACTTTTCATTCGCTTAACGTGAGTTCCTTCTGTCGAG
GTTGTTACCCTTTTCCTTCCTTGATATCATTTACACATTCCTATCTACTTTTGTGATTAA
GCTTACAGTGCTCAACCAAGAAATGCAAATTTCATAAACCTTTATGTTCTGTTTACAGTA
TCTCTTTGTGTATTATTTTAGTTCTGGTTTTTCTGTCATCTGTGTACTTGTTCAGATTTC
TGTGAACGCTTTACTTTTTTCTGCTTATATGCACACAGGCAGTACAGCTGCATATATATA
TATATATATATATATATATATATATATATATATAATTATTTATTTATAAGGTATGCATAA
TTAATCTTCCTAGATAATATTTATTTTAAAATTTTACTGTCGACAAAATGTGTGGAAAAG
TATCTTAGTTAACTATTTATTTGCTCATTGTTCTGGTCTGTCTACTAGATGTTGCACCCA
ATATATATATATATATATATATATATATATATATATAATT

consensusID : consensus_9549#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 101
fasta sequence

                              [AATAAAAGCGAATAATAATATGTCTAGGTAGAGAAATTATTATTAGTGTGCTTTACAAAAATGCAAAAGACATCTATTATACACTGATGAATAACTCAACT]

[+] EMBL AA952867             [AATAAAAGCGAATAATAATATGTCTAGGTAGAGAAATTATTATTAGTGTGCTTTACAAAAATGCAAAAGACATCTATTATACACTGATGAATAACTCAACT]




>consensus_9549#2
AATAAAAGCGAATAATAATATGTCTAGGTAGAGAAATTATTATTAGTGTGCTTTACAAAA
ATGCAAAAGACATCTATTATACACTGATGAATAACTCAACT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9549#0      -----------------------------------------------------------T 1
consensus_9549#2      ------------------------------------------------------------
consensus_9549#1      TTTCCTGGAGTGTGATGTTCATAAGTTACTTATCTATCGATTTCCGTTTTATTCGTCTAT 60
                                                                                  

consensus_9549#0      ATGTCTTTCATCCTACCGACTTTATTGTTCCCATGTGTTCTTTTTCACGTTTGACAACCT 61
consensus_9549#2      ------------------------------------------------------------
consensus_9549#1      ATAAATCTATTTCACACTATTATATTGTTTACTGTTTTTATAATTTATTTTATCCGTGAC 120
                                                                                  

consensus_9549#0      CTTTTCTCATCCCGTTTTTATCAAAACTATTAATCTATACATATGATATGTGTATCATTT 121
consensus_9549#2      ------------------------------------------------------------
consensus_9549#1      CTGCATTCCTATTATCTTGGAGCACTTTTCATTCGCTTAACGTGAGTTCCTTCTGTCGAG 180
                                                                                  

consensus_9549#0      CTTCTCATTCCCACATGTTCATCACAATTATTCTGTTATTATTCCTGTTCTGTGTATTAA 181
consensus_9549#2      ------------------------------------------------------------
consensus_9549#1      GTTGTTACCCTTTTCCTTCCTTGATATCATTTACACATTCCTATCTACTTTTGTGATTAA 240
                                                                                  

consensus_9549#0      TTCTTTTACAATGACAATGGATGTGGCAAAAATTGTTTAACAAAAAGCAATTTATTTTTC 241
consensus_9549#2      ------------------------------------------------------------
consensus_9549#1      GCTTACAGTGCTCAACCAAGAAATGCAAATTTCATAAACCTTTATGTTCTGTTTACAGTA 300
                                                                                  

consensus_9549#0      TTTGTTTTGTCGATTAGTTTCTGTGATCAGGTTCTTTCTTAATCATTGTTTGTATATAAC 301
consensus_9549#2      ------------------------------------------------------------
consensus_9549#1      TCTCTTTGTGTATTATTTTAGTTCTGGTTTTTCTGTCATCTGTGTACTTGTTCAGATTTC 360
                                                                                  

consensus_9549#0      TAACAATGTAAAATCTCCTGATTTCAGCATCTCGTTTGTCTAATCAGTGAGCACTTAATA 361
consensus_9549#2      --------------------------------------------------------AATA 4
consensus_9549#1      TGTGAACGCTTTACTTTTTTCTGCTTATATGCACACAGGCAGTACAGCTGCATATATATA 420
                                                                               ***

consensus_9549#0      AAACAAAAGATAATAATATGTCTAGAGGTAGAGAAATTATTATTAGTGTGGTTTACAAAA 421
consensus_9549#2      AAA--GCGAATAATAATATGTCTA--GGTAGAGAAATTATTATTAGTGTGCTTTACAAAA 60
consensus_9549#1      TATATATATATATATATATATATATATATATATAATTATTTATTTATAAGGTATGCATAA 480
                       *       ***   **** * **    ** * ** *  *****  *  * * * ** **

consensus_9549#0      ATG--------AAAAGACATCTATTATACA--CTGATGAATAACTCAACTGTTCACAATT 471
consensus_9549#2      ATGC-------AAAAGACATCTATTATACA--CTGATGAATAACTCAACT---------- 101
consensus_9549#1      TTAATCTTCCTAGATAATATTTATTTTAAAATTTTACTGTCGACAAAATGTGTGGAAAAG 540
                       *         * *  * ** **** ** *   * *      **  **            

consensus_9549#0      TCACAGAATGTCTAGAATGTTTGTTGCAACTACTATGTCCTCACTTCATTATTTACACGT 531
consensus_9549#2      ------------------------------------------------------------
consensus_9549#1      TATCTTAGTTAACTATTTATTTGCTCATTGTTCTGGTCTGTCTACTAGATGTTGCACCCA 600
                                                                                  

consensus_9549#0      CTGTTGTTTATTTATTAGAAAATTTTTTAAAACTCTGTTGTATGCGTTTATGTACGTGAC 591
consensus_9549#2      ------------------------------------------------------------
consensus_9549#1      ATATATATATATATATATATATATATATATATATATAATT-------------------- 640
                                                                                  

consensus_9549#0      AGACAAATAAAATTTGCATATTCAACCTCTACATAATCAAAAGACCATGCATATGCACAT 651
consensus_9549#2      ------------------------------------------------------------
consensus_9549#1      ------------------------------------------------------------
                                                                                  

consensus_9549#0      TTTTGTGTAACTTCCTTTAATCTATCTTATTATTAGACTGAATAACCTTATAATCACTAA 711
consensus_9549#2      ------------------------------------------------------------
consensus_9549#1      ------------------------------------------------------------
                                                                                  

consensus_9549#0      AGATATTTGCATTCTGATGCAACAACTCTTTTCATCTTTACTCTTATCAACACAGTATAC 771
consensus_9549#2      ------------------------------------------------------------
consensus_9549#1      ------------------------------------------------------------
                                                                                  

consensus_9549#0      ATTTTTCCTGGAGTGTGATGTTCATAAGTTACTTATCTATCGATTTCCGTTTTATTCGTC 831
consensus_9549#2      ------------------------------------------------------------
consensus_9549#1      ------------------------------------------------------------
                                                                                  

consensus_9549#0      TATATAAATCTATTTCATACTATTATATTGTTTACTGTTTTTATAATTTATCTTATCCGT 891
consensus_9549#2      ------------------------------------------------------------
consensus_9549#1      ------------------------------------------------------------
                                                                                  

consensus_9549#0      GACCTGCATTCCTATTATCTTGGAGCACTTTTCATTCGCTTAACGTGAGTTCCTTCTGTC 951
consensus_9549#2      ------------------------------------------------------------
consensus_9549#1      ------------------------------------------------------------
                                                                                  

consensus_9549#0      GAGGTTGTTACCCTTTTCCTTCCTTGATATCATTTACACATTCCTATCTACTTTTGTGAT 1011
consensus_9549#2      ------------------------------------------------------------
consensus_9549#1      ------------------------------------------------------------
                                                                                  

consensus_9549#0      TAAGCTTACAGTGCTCAACCAGAAATGCAAATTCATAAACTTTATGTTCTGTTACAGNNA 1071
consensus_9549#2      ------------------------------------------------------------
consensus_9549#1      ------------------------------------------------------------
                                                                                  

consensus_9549#0      TCTCTTGNGATTATTTTAGNTCTGGTTTTCTGCATCTGGTACTTGTCAGATTCTGTGACG 1131
consensus_9549#2      ------------------------------------------------------------
consensus_9549#1      ------------------------------------------------------------
                                                                                  

consensus_9549#0      CTTACTTTTTCTGCTATTGCCACAGCAGTACACTGCATATTNNNNNNNNNNNNNNNNNNN 1191
consensus_9549#2      ------------------------------------------------------------
consensus_9549#1      ------------------------------------------------------------
                                                                                  

consensus_9549#0      NNNNNNNNNNANNNTTTATTTAAAGTTGCCT 1222
consensus_9549#2      -------------------------------
consensus_9549#1      -------------------------------