cluster # 9552

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Schistosoma mansoni
cluster # 9552 cluster # 9552 Sequences # 10 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9552#0 length = 906 sequences # 2
consensus_9552#1 length = 793 sequences # 2

consensus_9552#2 length = 716 sequences # 5
consensus_9552#3 length = 350 sequences # 1

consensusID : consensus_9552#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 906
fasta sequence

                              [TCTCGAGGCAAGAATCGGCACGAGGATAATTGAAAATGCCAAAATGAGAGCGTCGGAACGAGATTTCATCGACTTAGGTGATATGGATGATCCACATGTTGCCATTCTCCAGTCTTCGGTGCCAAACAACTATACTCATCCATCAGTTCTTTCATCTGGATAAACGTATCGTGAATAGTTTGACTAATTTTCCTTGAATCTTTGTGACTTTTCATTGTTTATTCACTATCTATAGATCAATTCAACCCTTAAAGTAGTATTGTCAGATAGTCTGTCACATGTGGAATATATCGTATCGTTTTAAGTATTTATATTATTCCATAATGAACGTGCTAATTACTTTCTGGCTATAATTTTTGTACAATTTTATTTACTATTAACAATATGTAAAAGATGCTTATTTACTGCATACTTCAGAAGTGGTTTTTCCTCTGCTTAATGATACATATGTTTCACCATATACTTTGTAGGTATAGCTTTTTTGTAACATGTGTATTACATCATTGTTTAATTTCCTTTTTCATCCTGTCGACAAATTATTGAAACTCAATTATCAAACAACACGAGGCTAGGTAATTCAACTTCAAACATTAAGTATTATGTTAGGACGAATTCTATGTTTCCCAAACTGAAGTGGATAAATCAATGTTCAAATCTATGATACACTGATTAAGAGTCAAACCTTAACCATTAAGCCACGGCACCAATCTGTCGTGTAATACATATGAGACGCTTTTACTGAATTTAGTGATGATTTGACTTTTCTGACATCCAAACAATATTCAGCATAGTTATAAAACACTTTTTAATGAATCTTTGGTAACAATTCTTCCACTTAGTAAGAATAAACTTAGTGGTAGTTGCTGATAATATTCAAAACTAAATGAACATCACTTCACTGTTTGT]

[+] EMBL CD077347             [TCTCGAGGCAAGAATCGGCACGAGGATAATTGAAAATGCCAAAATGAGAGCGTCGGAACGAGATTTCATCGACTTAGGTGATATGGATGATCCACATGTTGCCATTCTCCAGTCTTCGGTGCCAAACAACTATACTCATCCATCAGTTCTTTCATCTGGATAAACGTATCGTGAATAGTTTGACTAATTTTCCTTGAATCTTTGTGACTTTTCATTGTTTATTCACTATCTATAGATCAATTCAACCCTTAAAGTAGTATTGTCAGATAGTCTGTCACATGTGGAATATATCGTATCGTTTTAAGTATTTATATTATTCCATAATGAACGTGCTAATTACTTTCTGGCTATAATTTTTGTACAATTTTATTTACTATTAACAATATGTAAAAGATGCTTATTTACTGCATACTTCAGAAGTGGTTTTTCCTCTGCTTAATGATACATATGTTTCACCATATACTTTGTAGGTATAGCTTTTTTGTAACATGTGTATTACATCATTGTTTAATTTCCTTTTTCATCCTGTCGACA                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD190992             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTTTTTGTAACATGTGTATTACATCATTGTTTAATTTCCTTTTTCATCCTGTCGACAAATTATTGAAACTCAATTATCAAACAACACGAGGCTAGGTAATTCAACTTCAAACATTAAGTATTATGTTAGGACGAATTCTATGTTTCCCAAACTGAAGTGGATAAATCAATGTTCAAATCTATGATACACTGATTAAGAGTCAAACCTTAACCATTAAGCCACGGCACCAATCTGTCGTGTAATACATATGAGACGCTTTTACTGAATTTAGTGATGATTTGACTTTTCTGACATCCAAACAATATTCAGCATAGTTATAAAACACTTTTTAATGAATCTTTGGTAACAATTCTTCCACTTAGTAAGAATAAACTTAGTGGTAGTTGCTGATAATATTCAAAACTAAATGAACATCACTTCACTGTTTGT]




>consensus_9552#0
TCTCGAGGCAAGAATCGGCACGAGGATAATTGAAAATGCCAAAATGAGAGCGTCGGAACG
AGATTTCATCGACTTAGGTGATATGGATGATCCACATGTTGCCATTCTCCAGTCTTCGGT
GCCAAACAACTATACTCATCCATCAGTTCTTTCATCTGGATAAACGTATCGTGAATAGTT
TGACTAATTTTCCTTGAATCTTTGTGACTTTTCATTGTTTATTCACTATCTATAGATCAA
TTCAACCCTTAAAGTAGTATTGTCAGATAGTCTGTCACATGTGGAATATATCGTATCGTT
TTAAGTATTTATATTATTCCATAATGAACGTGCTAATTACTTTCTGGCTATAATTTTTGT
ACAATTTTATTTACTATTAACAATATGTAAAAGATGCTTATTTACTGCATACTTCAGAAG
TGGTTTTTCCTCTGCTTAATGATACATATGTTTCACCATATACTTTGTAGGTATAGCTTT
TTTGTAACATGTGTATTACATCATTGTTTAATTTCCTTTTTCATCCTGTCGACAAATTAT
TGAAACTCAATTATCAAACAACACGAGGCTAGGTAATTCAACTTCAAACATTAAGTATTA
TGTTAGGACGAATTCTATGTTTCCCAAACTGAAGTGGATAAATCAATGTTCAAATCTATG
ATACACTGATTAAGAGTCAAACCTTAACCATTAAGCCACGGCACCAATCTGTCGTGTAAT
ACATATGAGACGCTTTTACTGAATTTAGTGATGATTTGACTTTTCTGACATCCAAACAAT
ATTCAGCATAGTTATAAAACACTTTTTAATGAATCTTTGGTAACAATTCTTCCACTTAGT
AAGAATAAACTTAGTGGTAGTTGCTGATAATATTCAAAACTAAATGAACATCACTTCACT
GTTTGT

consensusID : consensus_9552#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 793
fasta sequence

                              [TCGCGGCCAANAATTTGGCACGAGGGTCAAAGCATAAATTTATAGAGATATTTGTGCTTTAACTGTATGAAGGATTTACAAGGAAAGCACAAATATCTCTATAAATTTATCTCATTCTCCTACAAATTAAATGATTATTTGATGTAAAGGTATTTATTATCTGGGATCCCGAAGTAGTAAAAGCTAAATATAATATCGGTCAAGCTGTCGTTTAATTAAAAGTCAACACAACAGACTTATTTCGGTTAGGTCAACCGAAATTTCAAACTGTGGTGTTGGAAAATGTCATTTCAGGACTGCCATATGTCGTATGAATTTGTTTTCAGTACATTCAGTTTTCGTCTTTGCATTACAATACAACTACCTTGAAAAATTCCTCTTTTTATTCATTCAAATTTAACCTTTCCATCAACCTTGCTTCTATGTTTTTAGGTTTTGAAAATATGTTGTTTGATATATGGTCTCTAAAGTTGCATTTATTTTTTTCCTCCTATTTTCACAGTCTTCGGTGCCAAACAACTATACTCATCCATCAGTTCTTTCATCTGGATAAACGTATCGTGAATAGTTTGACTAATTTTCCTTGAATCTTTGTGACTTTTCATTGTTTATTCACTATCTATAGATCAATTCAACCCTTAAAGTAGTATTGTCAGATAGTCTGTCACATGTGGAATATATCGTATCGTTNTAAGTATTTATATTATTCCATATGAACGTGCTAANTACTNTCTGGATATAATTTTTGTAC-ATTTTATTTACTATTAAC-ATATGTAAAAGATGCNTATTACCT]

[+] EMBL CD081097             [TCGCGGCCAANAATTTGGCACGAGGGTCAAAGCATAAATTTATAGAGATATTTGTGCTTTAACTGTATGAAGGATTTACAAGGAAAGCACAAATATCTCTATAAATTTATCTCATTCTCCTACAAATTAAATGATTATTTGATGTAAAGGTATTTATTATCTGGGATCCCGAAGTAGTAAAAGCTAAATATAATATCGGTCAAGCTGTCGTTTAATTAAAAGTCAACACAACAGACTTATTTCGGTTAGGTCAACCGAAATTTCAAACTGTGGTGTTGGAAAATGTCATTTCAGGACTGCCATATGTCGTATGAATTTGTTTTCAGTACATTCAGTTTTCGTCTTTGCATTACAATACAACTACCTTGAAAAATTCCTCTTTTTATTCATTCAAATTTAACCTTTCCATCAACCTTGCTTCTATGTTTTTAGGTTTTGAAAATATGTTGTTTGATATATGGTCTCTAAAGTTGCATTTATTTTTTTCCTCCTATTTTCACAGTCTTCGGTGCCAAACAACTATACTCATCCATCAGTTCTTTCATCTGGATAAACGTATCGTGAATAGTTTGACTAATTTTCCTTGAATCTTTGTGACTTTTCATTGTTTATTCACTATCTATAGATCAATTCAACCCTTAAAGTAGTATTGTCAGATAGTCTGTCACATGTGGAATATATCGTATCGTTNTAAGTATTTATATTATTCCATATGAACGTGCTAANTACTNTCTGGATATAATTTTTGTAC ATTTTATTTACTATTAAC ATATGTAAAAGATGCNTATTAC  ]
[-] EMBL CD074920             [                                                                                                                          CAAATTAAATGATTATTTGATGTAAAGGTATTTATTATCTGGGATCCCGAAGTAGTAANAGCTAAATATAATATCGGTCAAGCTGTCGTTTAATTAAAAGTCAACACAACAGACTTATTTCGGTTAGGTCAACCGAAATTTCAAACTGTGGTGTTGGAAAATGTCATTTCAGGACTGCCATATGTCGTATGAATTTGTTTTCAGTACATTCAGTTTTCGTCTTTGCATTACAATACAACTACCTTGAAAAATTCCTCTTTTTATTCATTCAAATTTAACCTTTCCATCAACCTTGCTTCTATGTTTTTAGGTTTTGAAAATATGTTGTTTGATATATGGTCTCTAAAGTTGCATTTATTTTTTTCCTCCTATTTTCACAGTCTTCGGTGCCAAACAACTATACTCATCCATCAGTTCTTTCATCTGGATAAACGTATCGTGAATAGTTTGACTAATTTTCCTTGAATCTTTGTGACTTTTCATTGTTTATTCACTATCTATAGATCAATTCAACCCTTAAAGTAGTATTGTCAGATAGTCTGTCACATGTGGAATATATCGTATCGTTTTAAGTATTTATATTATTCCATATGAACGTGCTAATTACTTTCTGGATATAATTTTTGTACAATTTTATTTACTATTAACAATATGTAAAAGATGCTTATTtact]




>consensus_9552#1
TCGCGGCCAANAATTTGGCACGAGGGTCAAAGCATAAATTTATAGAGATATTTGTGCTTT
AACTGTATGAAGGATTTACAAGGAAAGCACAAATATCTCTATAAATTTATCTCATTCTCC
TACAAATTAAATGATTATTTGATGTAAAGGTATTTATTATCTGGGATCCCGAAGTAGTAA
AAGCTAAATATAATATCGGTCAAGCTGTCGTTTAATTAAAAGTCAACACAACAGACTTAT
TTCGGTTAGGTCAACCGAAATTTCAAACTGTGGTGTTGGAAAATGTCATTTCAGGACTGC
CATATGTCGTATGAATTTGTTTTCAGTACATTCAGTTTTCGTCTTTGCATTACAATACAA
CTACCTTGAAAAATTCCTCTTTTTATTCATTCAAATTTAACCTTTCCATCAACCTTGCTT
CTATGTTTTTAGGTTTTGAAAATATGTTGTTTGATATATGGTCTCTAAAGTTGCATTTAT
TTTTTTCCTCCTATTTTCACAGTCTTCGGTGCCAAACAACTATACTCATCCATCAGTTCT
TTCATCTGGATAAACGTATCGTGAATAGTTTGACTAATTTTCCTTGAATCTTTGTGACTT
TTCATTGTTTATTCACTATCTATAGATCAATTCAACCCTTAAAGTAGTATTGTCAGATAG
TCTGTCACATGTGGAATATATCGTATCGTTNTAAGTATTTATATTATTCCATATGAACGT
GCTAANTACTNTCTGGATATAATTTTTGTACATTTTATTTACTATTAACATATGTAAAAG
ATGCNTATTACCT

consensusID : consensus_9552#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 716
fasta sequence

                              [TTCAAAAAGGGTGACGTTTATGGAT-AAGTGATAAGATATTCCTTGACAAAGTTNAAAAAAGCAACTGTTTATTCGATCGTCCA-GCTTTGCATTAATATTTCTTATATCAATACATAACGTTCAAGATTACTAATGGATGGTCAACAGTCTGTTGGTGGAAAATTATC-CCAATCCTTACACTTTAGTGATGGTGTTTTTGATCTCGCCAATGAACACAATGAAGAGTGCTCTGACTCATCCAAGTCTAACAATATTCTATTGCGTGTTATTGATTGGTGCGGGGAAAAGTTGGCATGGAGTTTTGGCATTTCCTCACCGAAATATTATTATATAATTGAAAATGCCAAAATGAGAGCGTCGGAACGAGATTTCATCGACTTAGGTGATATGGATGATCCACATGTTGCCATTCTCCAGTCTTCGGTGCCAAACAACTATACTCATCCATCAGTTCTTTCATCTGGATAAACGTATCGTGAATAGTTTGACTAATTTTCCTTGAATCTTTGTGACTTTTCATTGTTTATTCACTATCTATAGATCAATTCAACCCTTAAAGTAGTATTGTCAGATAGTCTGTCACATGTGGAATATATCGTATCGTTTTAAGTATTTATATTATTCCATATGAACGTGCTAATTACTTTCTGGATATAATTTTTGTACAATTTTATTTACTATTAACAATATGTAAAAGATGCTTATTTACTGCATAC]

[+] EMBL AA568100             [TTCAAAAAGGGTGACGTTTATGGATAAAGTGATAAGATATTCCTTGACAAAGTTNAAAAAAGCAACTGTTTATTCGATCGTCCAGGCTTTGCATTAATATTTCTTATATCAATACATAACGTTCAAGATTACTAATGGATGGTCAACAGTCTGTTGGTGGAAAATTATC CCAATCCTTACACTTTAGTGATGGTGTTTTTGATCTCGCCNATGAACACAATGAANANTGCTCTGACTCATCCAAGTCTAACAATATTCTATTGCGTGTTATTGATTGGTGCGGGGAAAAGTTGGCATGGANTTTTGGCATTTCCTCACCGAAATATTATTATATAATTGAAAATGCCAAAATGAGAGCt                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD083801             [               GTTTATGGAT AAGTGATAAGATATTCCTTGACAAAGTTAAAAAAAGCAACTGTTTATTCGATCGTCCA GCTTTGCATTAATATTTCTTATATCAATACATAACGTTCAAGATTACTAATGGATGGTCAACAGTCTGTTGGTGGAAAATTATC CCAATCCTTACACTTTAGTGATGGTGTTTTTGATCTCGCCAATGAACACAATGAAGAGTGCTCTGACTCATCCAAGTCTAACAATATTCTATTGCGTGTTATTGATTGGTGCGGGGAAAAGTTGGCATGGAGTTTTGGCATTTCCTCACCGAAATATTATTATATAATTGAAAATGCCAAAATGAGAGCGTCGGAACGAGATTTCATCGACTTAGGTGATATGGATGATCCACATGTTGCCATTCTCCAGTCTTCGGTGCCAAACAACTATACTCATCCATCAGTTCTTTCATCTGGATAAACGTATCGTGAATAGTTTGACTAATTTTCCTTGAATCTT                                                                                                                                                                                                                 ]
[-] EMBL CD145275             [                                                                                                                            AAGATTACTAATGGATGGTCACCAGTCTGTTGGTGGAAAA TATCNNCAATCCTTACACTTTAGTGATGGTGTTTTTGATCTCGCCAATGAACACAATGAAGAGTGCTCTGACTCATCCAAGTCTAACAATATTCTATTGCGTGTTATTGATTGGTGCGGGGAAAAGTTGGCATGGAGTTTTGGCATTTCCTCACCGAAATATTATTATATAATTGAAAATGCCAAAATGAGAGCGTCGGAGCGAGATTTCATCGACTTAGGTGATATGGATGATCCACATGTTGCCATTCTCCAGTCTTCGGTGCCAAACAACTATACTCATCCATCAGTTCTTTCATCTGGATAAACGTATCGTGAATAGTTTGACTAATTTTCCTTGAATCTTTGTGACTTTTCATTGTTTATTCACTATCTATAGATCAATTCAACCCTTAGAGTAGTATTGTCAGATAGTCTGTCACATGTGGAATATATCGTATCGTTTTAAGTATTTATATTATTCCATATGAACGTGCTAATTACTTTCTGGATATAATTTTTGTACAATTTTATTTACTATTAACAATATGTAAAAGATGCTTATTTACTGCATAC]
[-] EMBL CD145357             [                                                                                                                            AAGATTACTAATGGATGGTCAACAGTCTG TGGTGNNANAATATCNCCAATCCTTACACTTTAGTGATGGTGTTNTTGATCTCGCCAATGAACACAATGAAGAGTGCTCTGACTCATCCAAGTCTAACAATATTCTATTGCGTGTTATTGATTGGTGCGGGGAAAAGTTGGCATGGAGTTTTGGCATTTCCTCACCGAAATATTATTATATAATTGAAAATGCCAAAATGAGAGCGTCGGAACGAGATTTCATCGACTTAGGTGATATGGATGATCCACATGTTGCCATTCTCCAGTCTTCGGTGCCAAACAACTATACTCATCCATCAGTTCTTTCATCTGGATAAACGTATCGTGAATAGTTTGACTAATTTTCCTTGAATCTTTGTGACTTTTCATTGTTTATTCACTATCTATAGATCAATTCAACCCTTAAAGTAGTATTGTCAGATAGTCTGTCACATGTGGAATATATCGTATCGTTTTAAGTATTTATATTATTCCATATGAACGTGCTAATTACTTTCTGGATATAATTTTTGTACAATTTTATTTACTATTAACAATATGTAAAAGATGCTTATTTACTGCATAC]
[-] EMBL CD145203             [                                                                                                                                                                                                              CGCCAATGAACACAATGAGGAGTGCTCTGACTCGTCCAAGTCTAACAATATTCTATTGCGTGTTATTGATTGGTGCGGGGAAAAGTTGGCATGGAGTTTTGGCATTTCCTCACCGAAATATTATTATATAATTGAAAATGCCAAAATGAGAGCGTCGGAACGAGATTTCATCGACTTAGGTGATATGGATGATCCACATGTTGCCATTCTCCAGTCCTCGGTGCCAAACAACTATACTCACCCATCGGTTCTTTCATCTGGATAAACGTATCGTGAATAGTTTGACTAATTTTCCTTGAATCTTTGTGACTTTTCATTGTTTATTCACTATCTATAGATCAATTCAACCCTTAAAGTAGTATTGTCAGATAGTCTGTCACATGTGGAATATATCGTATCGTTTTAAGTATTTATATTATTCCATATGAACGTGCTAATTACTTTCTGGATATAATTTTTGTACAATTTTATTTACTATTAACAATATGTAAAAGATGCTCATTTACTGCATAC]




>consensus_9552#2
TTCAAAAAGGGTGACGTTTATGGATAAGTGATAAGATATTCCTTGACAAAGTTNAAAAAA
GCAACTGTTTATTCGATCGTCCAGCTTTGCATTAATATTTCTTATATCAATACATAACGT
TCAAGATTACTAATGGATGGTCAACAGTCTGTTGGTGGAAAATTATCCCAATCCTTACAC
TTTAGTGATGGTGTTTTTGATCTCGCCAATGAACACAATGAAGAGTGCTCTGACTCATCC
AAGTCTAACAATATTCTATTGCGTGTTATTGATTGGTGCGGGGAAAAGTTGGCATGGAGT
TTTGGCATTTCCTCACCGAAATATTATTATATAATTGAAAATGCCAAAATGAGAGCGTCG
GAACGAGATTTCATCGACTTAGGTGATATGGATGATCCACATGTTGCCATTCTCCAGTCT
TCGGTGCCAAACAACTATACTCATCCATCAGTTCTTTCATCTGGATAAACGTATCGTGAA
TAGTTTGACTAATTTTCCTTGAATCTTTGTGACTTTTCATTGTTTATTCACTATCTATAG
ATCAATTCAACCCTTAAAGTAGTATTGTCAGATAGTCTGTCACATGTGGAATATATCGTA
TCGTTTTAAGTATTTATATTATTCCATATGAACGTGCTAATTACTTTCTGGATATAATTT
TTGTACAATTTTATTTACTATTAACAATATGTAAAAGATGCTTATTTACTGCATAC

consensusID : consensus_9552#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 350
fasta sequence

                              [GCATTTCCTCACCGAAATATTATTATATAATTGAAAATGCCAAAATGAGAGCGTCGGAACGAGATTTCATCGACTTAGGTGATATGGATGATCCACATGTTGCCATTCTCCAGGTAGTCTACTTGTTCAATATCAATCTCACATGTTTTATTTGTTTCAAATGCACTAAACGCTTGCATATAGTCTGCTTTTGTGTAATATAATGAACGTTTGGCTTTTTTGATCGCATAACTATATATATATAGGTCCAGAATTGACAAGAGTATTAATTATTAGCATTTCAATTAAAAGTAGTCTAATAGTTACCACTCTTTTTAATGTGATTGTTATTGTAGGTCGCCAACTAGACT]

[+] EMBL CD184233             [GCATTTCCTCACCGAAATATTATTATATAATTGAAAATGCCAAAATGAGAGCGTCGGAACGAGATTTCATCGACTTAGGTGATATGGATGATCCACATGTTGCCATTCTCCAGGTAGTCTACTTGTTCAATATCAATCTCACATGTTTTATTTGTTTCAAATGCACTAAACGCTTGCATATAGTCTGCTTTTGTGTAATATAATGAACGTTTGGCTTTTTTGATCGCATAACTATATATATATAGGTCCAGAATTGACAAGAGTATTAATTATTAGCATTTCAATTAAAAGTAGTCTAATAGTTACCACTCTTTTTAATGTGATTGTTATTGTAGGTCGCCAACTAGACT]




>consensus_9552#3
GCATTTCCTCACCGAAATATTATTATATAATTGAAAATGCCAAAATGAGAGCGTCGGAAC
GAGATTTCATCGACTTAGGTGATATGGATGATCCACATGTTGCCATTCTCCAGGTAGTCT
ACTTGTTCAATATCAATCTCACATGTTTTATTTGTTTCAAATGCACTAAACGCTTGCATA
TAGTCTGCTTTTGTGTAATATAATGAACGTTTGGCTTTTTTGATCGCATAACTATATATA
TATAGGTCCAGAATTGACAAGAGTATTAATTATTAGCATTTCAATTAAAAGTAGTCTAAT
AGTTACCACTCTTTTTAATGTGATTGTTATTGTAGGTCGCCAACTAGACT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9552#2      ------------------------------------------------------------
consensus_9552#3      ------------------------------------------------------------
consensus_9552#0      ------------------------------------------------------------
consensus_9552#1      TCGCGGCCAANAATTTGGCACGAGGGTCAAAGCATAAATTTATAGAGATATTTGTGCTTT 60
                                                                                  

consensus_9552#2      ----------------------------TTCAAAAAGGGTGACGTTTATGGATAAGTGAT 32
consensus_9552#3      ------------------------------------------------------------
consensus_9552#0      ------------------------------------------------------------
consensus_9552#1      AACTGTATGAAGGATTTACAAGGAAAGCACAAATATCTCTATAAATTTATCTCATTCTCC 120
                                                                                  

consensus_9552#2      AAGATATTCCTTGACAAAGTTNAAAAAAGCAACTGTTTATTCGATCGTCCAGCTTTGCAT 92
consensus_9552#3      ------------------------------------------------------------
consensus_9552#0      ------------------------------------------------------------
consensus_9552#1      TACAAATTAAATGATTATTTGATGTAAAGGTATTTATTATCTGGGATCCCGAAGTAGTAA 180
                                                                                  

consensus_9552#2      TAATATTTCTTATATCAATACATAACGTTCAAGATTACTAATGGATGGTCAACAGTCTGT 152
consensus_9552#3      ------------------------------------------------------------
consensus_9552#0      ------------------------------------------------------------
consensus_9552#1      AAGCTAAATATAATATCGGTCAAGCTGTCGTTTAATTAAAAGTCAACACAACAGACTTAT 240
                                                                                  

consensus_9552#2      TGGTGGAAAATTATCCCAATCCTTACACTTTAGTGATGGTGTTTTTGATCTCGCCAATGA 212
consensus_9552#3      ------------------------------------------------------------
consensus_9552#0      ------------------------------------------------------------
consensus_9552#1      TTCGGTTAGGTCAACCGAAATTTCAAACTGTGGTGTTGGAAAATGTCATTTCAGGACTGC 300
                                                                                  

consensus_9552#2      ACACAATGAAGAGTGCTCTGACTCATCCAAGTCTAACAATATTCTATTGCGTGTTATTGA 272
consensus_9552#3      ------------------------------------------------------------
consensus_9552#0      ------------------------------------------------------------
consensus_9552#1      CATATGTCGTATGAATTTGTTTTCAGTACATTCAGTTTTCGTCTTTGCATTACAATACAA 360
                                                                                  

consensus_9552#2      TTGGTGCGGGGAAAAGTTGGCATGGAGTTTTGGCATTT--CCTCACCGAAAT-ATTATTA 329
consensus_9552#3      --------------------------------GCATTT--CCTCACCGAAAT-ATTATTA 25
consensus_9552#0      -----------------------------------TCT--CGAGGCAAGAATCGGCACGA 23
consensus_9552#1      CTACCTTGAAAAATTCCTCTTTTTATTCATTCAAATTTAACCTTTCCATCAACCTTGCTT 420
                                                         * *  *    *    *         

consensus_9552#2      T-ATAATTGAAAATGCCAAAATGAGAGCGTCGGAACGAGATTTCATCGACTTAGGTGATA 388
consensus_9552#3      T-ATAATTGAAAATGCCAAAATGAGAGCGTCGGAACGAGATTTCATCGACTTAGGTGATA 84
consensus_9552#0      GGATAATTGAAAATGCCAAAATGAGAGCGTCGGAACGAGATTTCATCGACTTAGGTGATA 83
consensus_9552#1      CTATGTTTTTAGGTTTTGAAAATATGTTGTT----TGATATATGGTCT-CTAAAGTTGCA 475
                        **  **  *  *    ***  *    **      ** ** *  **  ** * **   *

consensus_9552#2      TGGATGATCCACATGTTGCCATTCTC-CAGT---CTTCGGTGCCAAACAACTATA-CTCA 443
consensus_9552#3      TGGATGATCCACATGTTGCCATTCTC-CAGGTAGTCTACTTGTTCAATATCAATCTCACA 143
consensus_9552#0      TGGATGATCCACATGTTGCCATTCTC-CAGT---CTTCGGTGCCAAACAACTATA-CTCA 138
consensus_9552#1      T---TTATTTTTTTCCTCCTATTTTCACAGT---CTTCGGTGCCAAACAACTATA-CTCA 528
                      *   * **     *  * * *** ** ***      *   **   ** * * **  * **

consensus_9552#2      TCCATCAGTTCTTTCATCTGGA-TAAACGTATCGTGAATAGTTTGACTAATTTTCCT--- 499
consensus_9552#3      TGTTTTATTTGTTTCAAATGCACTAAACGC-TTGCATATAGTCTGCTTTTGTGTAATATA 202
consensus_9552#0      TCCATCAGTTCTTTCATCTGGA-TAAACGTATCGTGAATAGTTTGACTAATTTTCCT--- 194
consensus_9552#1      TCCATCAGTTCTTTCATCTGGA-TAAACGTATCGTGAATAGTTTGACTAATTTTCCT--- 584
                      *   * * ** *****  ** * ******  * *   ***** **  *   * *  *   

consensus_9552#2      -TGAATCTTTGTGACTTTTCATTGTTTATTCACTATCTATAGATCAATTCAACCCTTAAA 558
consensus_9552#3      ATGAACGTTTGGCTTTTTTGATCGCATA---ACTATATATATATAGGTCCAGAATTGACA 259
consensus_9552#0      -TGAATCTTTGTGACTTTTCATTGTTTATTCACTATCTATAGATCAATTCAACCCTTAAA 253
consensus_9552#1      -TGAATCTTTGTGACTTTTCATTGTTTATTCACTATCTATAGATCAATTCAACCCTTAAA 643
                       ****  ****    **** ** *  **   ***** **** **   * **    * * *

consensus_9552#2      GTAGTATTGTCAGATAGTCTGTCACATGTGGAATATATCGTATCGTTTTAAGTATTTATA 618
consensus_9552#3      AGAGTATTAATTATTAGCATTTCA-ATTAAAAGTA-GTCTAATAGTTACCACTCTTTTTA 317
consensus_9552#0      GTAGTATTGTCAGATAGTCTGTCACATGTGGAATATATCGTATCGTTTTAAGTATTTATA 313
consensus_9552#1      GTAGTATTGTCAGATAGTCTGTCACATGTGGAATATATCGTATCGTTNTAAGTATTTATA 703
                        ******      ***  * *** **    * **  **  ** ***   * * *** **

consensus_9552#2      TTATTCCATA-TGAACGTGCTAATTACTTTCTGGATATAATTTTTGTACAATTTTATTTA 677
consensus_9552#3      -------ATG-TGATTGTTATTGTAGGTCGCCAACTAGACT------------------- 350
consensus_9552#0      TTATTCCATAATGAACGTGCTAATTACTTTCTGGCTATAATTTTTGTACAATTTTATTTA 373
consensus_9552#1      TTATTCCATA-TGAACGTGCTAANTACTNTCTGGATATAATTTTTGTACA-TTTTATTTA 761
                             **  ***  **  *      *  *    ** * *                   

consensus_9552#2      CTATTAACAATATGTAAAAGATGCTTATTTACTGCATAC--------------------- 716
consensus_9552#3      ------------------------------------------------------------
consensus_9552#0      CTATTAACAATATGTAAAAGATGCTTATTTACTGCATACTTCAGAAGTGGTTTTTCCTCT 433
consensus_9552#1      CTATTAACA-TATGTAAAAGATGCNTATTACCT--------------------------- 793
                                                                                  

consensus_9552#2      ------------------------------------------------------------
consensus_9552#3      ------------------------------------------------------------
consensus_9552#0      GCTTAATGATACATATGTTTCACCATATACTTTGTAGGTATAGCTTTTTTGTAACATGTG 493
consensus_9552#1      ------------------------------------------------------------
                                                                                  

consensus_9552#2      ------------------------------------------------------------
consensus_9552#3      ------------------------------------------------------------
consensus_9552#0      TATTACATCATTGTTTAATTTCCTTTTTCATCCTGTCGACAAATTATTGAAACTCAATTA 553
consensus_9552#1      ------------------------------------------------------------
                                                                                  

consensus_9552#2      ------------------------------------------------------------
consensus_9552#3      ------------------------------------------------------------
consensus_9552#0      TCAAACAACACGAGGCTAGGTAATTCAACTTCAAACATTAAGTATTATGTTAGGACGAAT 613
consensus_9552#1      ------------------------------------------------------------
                                                                                  

consensus_9552#2      ------------------------------------------------------------
consensus_9552#3      ------------------------------------------------------------
consensus_9552#0      TCTATGTTTCCCAAACTGAAGTGGATAAATCAATGTTCAAATCTATGATACACTGATTAA 673
consensus_9552#1      ------------------------------------------------------------
                                                                                  

consensus_9552#2      ------------------------------------------------------------
consensus_9552#3      ------------------------------------------------------------
consensus_9552#0      GAGTCAAACCTTAACCATTAAGCCACGGCACCAATCTGTCGTGTAATACATATGAGACGC 733
consensus_9552#1      ------------------------------------------------------------
                                                                                  

consensus_9552#2      ------------------------------------------------------------
consensus_9552#3      ------------------------------------------------------------
consensus_9552#0      TTTTACTGAATTTAGTGATGATTTGACTTTTCTGACATCCAAACAATATTCAGCATAGTT 793
consensus_9552#1      ------------------------------------------------------------
                                                                                  

consensus_9552#2      ------------------------------------------------------------
consensus_9552#3      ------------------------------------------------------------
consensus_9552#0      ATAAAACACTTTTTAATGAATCTTTGGTAACAATTCTTCCACTTAGTAAGAATAAACTTA 853
consensus_9552#1      ------------------------------------------------------------
                                                                                  

consensus_9552#2      -----------------------------------------------------
consensus_9552#3      -----------------------------------------------------
consensus_9552#0      GTGGTAGTTGCTGATAATATTCAAAACTAAATGAACATCACTTCACTGTTTGT 906
consensus_9552#1      -----------------------------------------------------