cluster # 9555

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Schistosoma mansoni
cluster # 9555 cluster # 9555 Sequences # 10 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9555#0 length = 1097 sequences # 4
consensus_9555#1 length = 578 sequences # 2
consensus_9555#2 length = 505 sequences # 1

consensus_9555#3 length = 413 sequences # 1
consensus_9555#4 length = 325 sequences # 1
consensus_9555#5 length = 247 sequences # 1

consensusID : consensus_9555#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1097
fasta sequence

                              [AATGAATACCAGCTTCAGCTAATATTTAAGCATGCGAAATATAGCACAGAAGCAATAAATAAAATGAAAGAATGTGAAGTATGAAGTAACACTTAATATCAGCTACCATTAGACATCAGGATAGGTGGTAGTATCTTATTTGGGTTCAGCCGGTCAGCATTTTTTATGCAAGATTCTCTCCAAAGAGACGCAGTCGTGGACCTCATTGTTAACCCTCCTCTCTCATCCAAGCTTGAGACAGGAAATAATTTTAGAAAGGTTGTAAGCAAAGTTTAAGTTCAGCTATTGAATGTTATTTTCAACTATGTTAATAGCACTAAAGGTCATAATTCTAAAATGACCTTTATTTTTTTCATTTTATTTTCAAGGCTAGCATCTGTTAATGTATATAACTTGTTGTTATCAGGTTTTTTGAAATTACGGATTGAATACTTAAGTTATTTCAATCACTTTCACAAGGATTTATTTTTATTATTTCATGTTCTTTAACGTCCTAGAAATTCTGCTTTAGCCTCCTGGTATTTTGTTAACTGTCAATCACAACACTTATTTACCATAGTTTTTTTCTTTATTATTCAATAGACTGTCCAATTAAAACAGTTGCTGTTTGTGCTGGTTCCGGTGGGTCGCTTTTATGCCAAACACCAGCCTCATTTGCTGCCGATTTATTTATCACTGGAGAATTATCTCATCACGACCGTCTTGAGGCTGTTTCTCGTGGTATTTCTATTATTTTAGCTGGGCATTCTGTTACGGAAAGAGGATTNTTC-AGGGAAGATTTATCCCAGACTTTCGTCATCTTCTATCAACTGTACATAATGCCGGTGAAATCCCACATGTGGAATTGTTATTATCCGAGGCAGATCATGAACCAGGTTTTGTTGTTTAACAAATCGTTGTTATATTTGTGCGATTTTGTAGTATTCGATGTGTTACAACAGATATTTTTAATGGTTTCACAGTTTTTTCCCATTTCTTTAATACTGGATATTATTATTGATCGACTACCAACTTGTATAATAAACCATAGCTATTATTCCGTTTGTTCTCAGATTTCAAATAATTGTTCCTTTGCTCATCCAGTGTCAGAGTTACTA]

[+] EMBL CD110955             [AATGAATACCAGCTTCAGCTAATATTTAAGCATGCGAAATATAGCACAGAAGCAATAAATAAAATGAAAGAATGTGAAGTATGAAGTAACACTTAATATCAGCTACCATTAGACATCAGGATAGGTGGTAGTATCTTATTTGGGTTCAGCCGGTCAGCATTTTTTATGCAAGATTCTCTCCAAAGAGACGCAGTCGTGGACCTCATTGTTAACCCTCCTCTCTCATCCAAGCTTGAGACAGGAAATAATTTTAGAAAGGTTGTAAGCAAAGTTTAAGTTCAGCTATTGAATGTTATTTTCAACTATGTTAATAGCACTAAAGGTCATAATTCTAAAATGACCTTTATTTTTTTCATTTTATTTTCAAGGCTAGCATCTGTTAATGTATATAACTTGTTGTTATCAGGTTTTTTGAAATTACGGATTGAATACTTAAGTTATTTCAATCACTTTCACAAGGATTTATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD098425             [gATGAATACCAGCTTCAGCTAATATTTAAGCATGCGAAATATAGCACAGAAGCAATAAATAAAATGAAAGAATGTGAAGTATGAAGTAACACTTAATATCAGCTACCATTAGACATCAGGATAGGTGGTAGTATCTTATTTGGGTTCAGCCGGTCAGCATTTTTTATGCAAGATTCTCTCCAAAGAGACGCAGTCGTGGACCTCATTGTTAACCCTCCTCTCTCATCCAAGCTTGAGACAGGAAATAATTTTAGAAAGGTTGTAAGCAAAGTTTAAGTTCAGCTATTGAATGTTATTTTCAACTATGTTAATAGCACTAAAGGTCATAATTCTAAAATGACCTTTATTTTTTTCATTTTATTTTCAAGGCTAGCATCTGTTAATGTATATAACTTGTTGTTATCAGGTTTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD082644             [                                                                                                                                               GTTCAGCCGGTCAGCATTTTTTATGCAAGATTCTCTCCAAAGAGACGCAGTCGTGGACCTCATTGTTAACCCTCCTCTCTCATCCAAGCTTGAGACAGGAAATAATTTTAGAAAGGTTGTAAGCAAAGTTTAAGTTCAGCTATTGAATGTTATTTTCAACTATGTTAATAGCACTAAAGGTCATAATTCTAAAATGACCTTTATTTTTTTCATTTTATTTTCAAGGCTAGCATCTGTTAATGTATATAACTTGTTGTTATCAGGTTTTTTGAAATTACGGATTGAATACTTAAGTTATTTCAATCACTTTCACAAGGATTTATTTTTATTATTTCATGTTCTTTAACGTCCTAGAAATTCTGCTTTAGCCTCCTGGTATTTTGTTAACTGTCAATCACAACACTTATTTACCATAGTTTTTTTCTTTATTATTCAATAGACTGTCCAATTAAAACAGTTGCTGTTTGTGCTGGTTCCGGTGGGTCGCTTTTATGCCAAACACCAGCCTCATTTGCTGCCGATTTATTTATCACTGGAGAATTATCTCATCACGACCGTCTTGAGGCTGTTTCTCGTGGTATTTCTATTATTTTAGCTGGGCATTCTGTTACGGAAAGAGGATTNTTC AGGGAAGATTTATCCCAGAC                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AI977305             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGCTTTTATGCCAAACACCAGCCTCATTTGCTGCCGATTTATTTATCACTGGAGAATTATCTCATCACGACCGTCTTGAGGCTGTTTCTCGTGGTATTTCTATTATTTTAGCTGGGCATTCTGTTACGGAAAGAGGATTTTTCAAGGAAAGATTTATCCCAGACTTTCGTCATCTTCTATCAACTGTACATAATGCCGGTGAAATCCCACATGTGGAATTGTTATTATCCGAGGCAGATCATGAACCAGGTTTTGTTGTTTAACAAATCGTTGTTATATTTGTGCGATTTTGTAGTATTCGATGTGTTACAACAGATATTTTTAATGGTTTCACAGTTTTTTCCCATTTCTTTAATACTGGATATTATTATTGATCGACTACCAACTTGTATAATAAACCATAGCTATTATTCCGTTTGTTCTCAGATTTCAAATAATTGTTCCTTTGCTCATCCAGTGTCAGAGTTACTA]




>consensus_9555#0
AATGAATACCAGCTTCAGCTAATATTTAAGCATGCGAAATATAGCACAGAAGCAATAAAT
AAAATGAAAGAATGTGAAGTATGAAGTAACACTTAATATCAGCTACCATTAGACATCAGG
ATAGGTGGTAGTATCTTATTTGGGTTCAGCCGGTCAGCATTTTTTATGCAAGATTCTCTC
CAAAGAGACGCAGTCGTGGACCTCATTGTTAACCCTCCTCTCTCATCCAAGCTTGAGACA
GGAAATAATTTTAGAAAGGTTGTAAGCAAAGTTTAAGTTCAGCTATTGAATGTTATTTTC
AACTATGTTAATAGCACTAAAGGTCATAATTCTAAAATGACCTTTATTTTTTTCATTTTA
TTTTCAAGGCTAGCATCTGTTAATGTATATAACTTGTTGTTATCAGGTTTTTTGAAATTA
CGGATTGAATACTTAAGTTATTTCAATCACTTTCACAAGGATTTATTTTTATTATTTCAT
GTTCTTTAACGTCCTAGAAATTCTGCTTTAGCCTCCTGGTATTTTGTTAACTGTCAATCA
CAACACTTATTTACCATAGTTTTTTTCTTTATTATTCAATAGACTGTCCAATTAAAACAG
TTGCTGTTTGTGCTGGTTCCGGTGGGTCGCTTTTATGCCAAACACCAGCCTCATTTGCTG
CCGATTTATTTATCACTGGAGAATTATCTCATCACGACCGTCTTGAGGCTGTTTCTCGTG
GTATTTCTATTATTTTAGCTGGGCATTCTGTTACGGAAAGAGGATTNTTCAGGGAAGATT
TATCCCAGACTTTCGTCATCTTCTATCAACTGTACATAATGCCGGTGAAATCCCACATGT
GGAATTGTTATTATCCGAGGCAGATCATGAACCAGGTTTTGTTGTTTAACAAATCGTTGT
TATATTTGTGCGATTTTGTAGTATTCGATGTGTTACAACAGATATTTTTAATGGTTTCAC
AGTTTTTTCCCATTTCTTTAATACTGGATATTATTATTGATCGACTACCAACTTGTATAA
TAAACCATAGCTATTATTCCGTTTGTTCTCAGATTTCAAATAATTGTTCCTTTGCTCATC
CAGTGTCAGAGTTACTA

consensusID : consensus_9555#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 578
fasta sequence

                              [GGAGCCATAATTCGGCACGACGGCGATCACCAATTACTCAAACTTTATCCAGGTTGACTGTTGTTATGAATGAAAATTTCGGAGACTTTGTCATATCCACAGGAGTAGGAGTGTGTGCAACTAATATTAAGAGACTGTCCAATTAAAACAGTTGCTGTTTGTGCTGGTTCCGGTGGGTCGCTTTTATGCCAAACACCAGCCTCATTTGCTGCCGATTTATTTATCACTGGAGAATTATCTCATCACGACCGTCTTGAGGCTGTTTCTCGTGGTATTTCTATTATTTTAGCTGGGCATTCTGTTACGGAAAGAGGATTTTTCAAGGAAAGATTTATCCCAGACTTTCGTCATCTTCTATCAACTGTACATAATGCCGGTGAAATCCCACATGTGGAATTGTTATTATCCGAGGCAGATCATGAACCAGGTTTTGTTGTTTAACAAATCGTTGTTATATTTGTGCGATTTTGTAGTATTCGATGTGTTACAACAGATATTTTTAATGGTTTCACAGTTTTTTCCCATTTCTTTAATACTGGATATTATTATTGATCGACTACCAACTTGTATAATAAACC]

[+] EMBL CD081596             [GGAGCCATAATTCGGCACGACGGCGATCACCAATTACTCAAACTTTATCCAGGTTGACTGTTGTTATGAATGAAAATTTCGGAGACTTTGTCATATCCACAGGAGTAGGAGTGTGTGCAACTAATATTAAGAGACTGTCCAATTAAAACAGTTGCTGTTTGTGCTGGTTCCGGTGGGTCGCTTTTATGCCAAACACCAGCCTCATTTGCTGCCGATTTATTTATCACTGGAGAATTATCTCATCACGACCGTCTTGAGGCTGTTTCTCGTGGTATTTCTATTATTTTAGCTGGGCATTCTGTTACGGAAAGAGGATTTTTCAAGGAAAGATTTATCCCAGACTTTCGTCATCTTCTATCAACTGTACATAATGCCGGTGAAATCCCACATGTGGAATTGTTATTATCCGAGGCAGATCATGAACCAGGTTTTGTTGTTTAACAAATCGTTGTTATATTTGTGCGATTTTGTAGTATTCGATGTGTTACAACAGATATTTTTAATGGTTTCACAGTTTTTTCCCATTTCTTTAATACTGGATATTATTATTGATCGACTACCAACTTGTATAATAAAC ]
[-] EMBL CD075419             [                        GATCACCAATTACTCAAACTTTATCCAGGTTGACTGTTGTTATGAATGAAAATTTCGGAGACTTTGTCATATCCACAGGAGTAGGAGTGTGTGCAACTAATATTAAGAGACTGTCCAATTAAAACAGTTGCTGTTTGTGCTGGTTCCGGTGGGTCGCTTTTATGCCAAACACCAGCCTCATTTGCTGCCGATTTATTTATCACTGGAGAATTATCTCATCACGACCGTCTTGAGGCTGTTTCTCGTGGTATTTCTATTATTTTAGCTGGGCATTCTGTTACGGAAAGAGGATTTTTCAAGGAAAGATTTATCCCAGACTTTCGTCATCTTCTATCAACTGTACATAATGCCGGTGAAATCCCACATGTGGAATTGTTATTATCCGAGGCAGATCATGAACCAGGTTTTGTTGTTTAACAAATCGTTGTTATATTTGTGCGATTTTGTAGTATTCGATGTGTTACAACAGATATTTTTAATGGTTTCACAGTTTTTTCCCATTTCTTTAATACTGGATATTATTATTGATCGACTACCAACTTGTATAATAAACC]




>consensus_9555#1
GGAGCCATAATTCGGCACGACGGCGATCACCAATTACTCAAACTTTATCCAGGTTGACTG
TTGTTATGAATGAAAATTTCGGAGACTTTGTCATATCCACAGGAGTAGGAGTGTGTGCAA
CTAATATTAAGAGACTGTCCAATTAAAACAGTTGCTGTTTGTGCTGGTTCCGGTGGGTCG
CTTTTATGCCAAACACCAGCCTCATTTGCTGCCGATTTATTTATCACTGGAGAATTATCT
CATCACGACCGTCTTGAGGCTGTTTCTCGTGGTATTTCTATTATTTTAGCTGGGCATTCT
GTTACGGAAAGAGGATTTTTCAAGGAAAGATTTATCCCAGACTTTCGTCATCTTCTATCA
ACTGTACATAATGCCGGTGAAATCCCACATGTGGAATTGTTATTATCCGAGGCAGATCAT
GAACCAGGTTTTGTTGTTTAACAAATCGTTGTTATATTTGTGCGATTTTGTAGTATTCGA
TGTGTTACAACAGATATTTTTAATGGTTTCACAGTTTTTTCCCATTTCTTTAATACTGGA
TATTATTATTGATCGACTACCAACTTGTATAATAAACC

consensusID : consensus_9555#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 505
fasta sequence

                              [TTCAAGTAGCGAAACAGCGTCGAGTTTAGCTTCATTAGCCTTTGTCATCGTGTTCTCGATTTCATTAATACATGTTCCTTTCAAAGTTGGCCCAAAAAGGGATGGAGCTTACCAAAATTGTCCAGTTGTTGGATGCTTATTGCTTACCACACTTGGCAGAGAAGTGGGATAATGTCGGTCTCCTAATAGAACCTTCTCTTCCACACCATGTGGACAGGATTTTTATCACAAATGATTTGACAGAACAAGTACTCGACGAGGCGATTTCTCAAAAATGTGGCCTGATCGTTTCATACCATCCACCAATTTTTTCTCCTCTTAAAAAGCTTACGCAACAGCATTGTAAAGAGCGTATAGTTATACGTTGTATAGAAAACAAAATTGGAGTATTTTCACCACACACCGGGCTTGATGCAAAACTTGGAGGTATCAACGATTGGCTTTTAGAACCATTAGCTGTCAATCGAAGAGAAAGTTTATCTCGATCACCAATTACTCAAACTTT]

[+] EMBL AW016969             [TTCAAGTAGCGAAACAGCGTCGAGTTTAGCTTCATTAGCCTTTGTCATCGTGTTCTCGATTTCATTAATACATGTTCCTTTCAAAGTTGGCCCAAAAAGGGATGGAGCTTACCAAAATTGTCCAGTTGTTGGATGCTTATTGCTTACCACACTTGGCAGAGAAGTGGGATAATGTCGGTCTCCTAATAGAACCTTCTCTTCCACACCATGTGGACAGGATTTTTATCACAAATGATTTGACAGAACAAGTACTCGACGAGGCGATTTCTCAAAAATGTGGCCTGATCGTTTCATACCATCCACCAATTTTTTCTCCTCTTAAAAAGCTTACGCAACAGCATTGTAAAGAGCGTATAGTTATACGTTGTATAGAAAACAAAATTGGAGTATTTTCACCACACACCGGGCTTGATGCAAAACTTGGAGGTATCAACGATTGGCTTTTAGAACCATTAGCTGTCAATCGAAGAGAAAGTTTATCTCGATCACCAATTACTCAAACTTT]




>consensus_9555#2
TTCAAGTAGCGAAACAGCGTCGAGTTTAGCTTCATTAGCCTTTGTCATCGTGTTCTCGAT
TTCATTAATACATGTTCCTTTCAAAGTTGGCCCAAAAAGGGATGGAGCTTACCAAAATTG
TCCAGTTGTTGGATGCTTATTGCTTACCACACTTGGCAGAGAAGTGGGATAATGTCGGTC
TCCTAATAGAACCTTCTCTTCCACACCATGTGGACAGGATTTTTATCACAAATGATTTGA
CAGAACAAGTACTCGACGAGGCGATTTCTCAAAAATGTGGCCTGATCGTTTCATACCATC
CACCAATTTTTTCTCCTCTTAAAAAGCTTACGCAACAGCATTGTAAAGAGCGTATAGTTA
TACGTTGTATAGAAAACAAAATTGGAGTATTTTCACCACACACCGGGCTTGATGCAAAAC
TTGGAGGTATCAACGATTGGCTTTTAGAACCATTAGCTGTCAATCGAAGAGAAAGTTTAT
CTCGATCACCAATTACTCAAACTTT

consensusID : consensus_9555#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 413
fasta sequence

                              [GTGTGCAACTAATATTAAGAGTAATGCTGGAATAACAGCTATTGTTACTTGTACCGAGTCCGATTTAAAACGTGTCGTAGATGTGACTGAGGAGTCTAAAATTTCAGTTGTTAGTATCGACACTATTCAGAAGACAAGTGAAGAAGGATGTGGAAGACTGGTCACTCTACAGTTCCCAGTTCATCTAAAAGCAGTTATCGCCGCCTACAAAAAGTTTCTGAACATGGGACATTTAACTGTAGCCCCAGGACTAGGTAAAACCCTCGACTGTCCAATTAAAACAGTTGCTGTTTGTGCTGGTTCCGGTGGGTCGCTTTTATGCCAAACACCAGCCTCATTTGCTGCCGATTTATTTATCACTGGAGAATTATCTCATCACGACCGTCTTGAGGCTGTTTCTCGTGGTATTTCTA]

[-] EMBL CD193170             [GTGTGCAACTAATATTAAGAGTAATGCTGGAATAACAGCTATTGTTACTTGTACCGAGTCCGATTTAAAACGTGTCGTAGATGTGACTGAGGAGTCTAAAATTTCAGTTGTTAGTATCGACACTATTCAGAAGACAAGTGAAGAAGGATGTGGAAGACTGGTCACTCTACAGTTCCCAGTTCATCTAAAAGCAGTTATCGCCGCCTACAAAAAGTTTCTGAACATGGGACATTTAACTGTAGCCCCAGGACTAGGTAAAACCCTCGACTGTCCAATTAAAACAGTTGCTGTTTGTGCTGGTTCCGGTGGGTCGCTTTTATGCCAAACACCAGCCTCATTTGCTGCCGATTTATTTATCACTGGAGAATTATCTCATCACGACCGTCTTGAGGCTGTTTCTCGTGGTATTTCTA]




>consensus_9555#3
GTGTGCAACTAATATTAAGAGTAATGCTGGAATAACAGCTATTGTTACTTGTACCGAGTC
CGATTTAAAACGTGTCGTAGATGTGACTGAGGAGTCTAAAATTTCAGTTGTTAGTATCGA
CACTATTCAGAAGACAAGTGAAGAAGGATGTGGAAGACTGGTCACTCTACAGTTCCCAGT
TCATCTAAAAGCAGTTATCGCCGCCTACAAAAAGTTTCTGAACATGGGACATTTAACTGT
AGCCCCAGGACTAGGTAAAACCCTCGACTGTCCAATTAAAACAGTTGCTGTTTGTGCTGG
TTCCGGTGGGTCGCTTTTATGCCAAACACCAGCCTCATTTGCTGCCGATTTATTTATCAC
TGGAGAATTATCTCATCACGACCGTCTTGAGGCTGTTTCTCGTGGTATTTCTA

consensusID : consensus_9555#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 325
fasta sequence

                              [CGAGTTTAGCTTCATTAACCTTGGCCCAAAAGGGATGGAGCTTACCAAAATTGTCCAGTTGTTGGGTGCTTATTGCTTACCACACTTGGCAGAGAAGTGGGATAATGTCGGTCTCCTAATAGAACCTTCTCTTCCACACCATGTGGACAGGATTTTTATCACAAATGATTTGACAGAACAAGTACTCGACGAGGCGATTTCTCAAAAATGTGGCCTGATCGTTTCATACCATCCACCAATTTTTTCTCCTCTTAAAAAGCTTACGCAACAGCATTGGAAAGAGCGTATAGTTATACGTTGTATAGAAAACAAAATTGGAGTATTT]

[+] EMBL CD183211             [CGAGTTTAGCTTCATTAACCTTGGCCCAAAAGGGATGGAGCTTACCAAAATTGTCCAGTTGTTGGGTGCTTATTGCTTACCACACTTGGCAGAGAAGTGGGATAATGTCGGTCTCCTAATAGAACCTTCTCTTCCACACCATGTGGACAGGATTTTTATCACAAATGATTTGACAGAACAAGTACTCGACGAGGCGATTTCTCAAAAATGTGGCCTGATCGTTTCATACCATCCACCAATTTTTTCTCCTCTTAAAAAGCTTACGCAACAGCATTGGAAAGAGCGTATAGTTATACGTTGTATAGAAAACAAAATTGGAGTATTT]




>consensus_9555#4
CGAGTTTAGCTTCATTAACCTTGGCCCAAAAGGGATGGAGCTTACCAAAATTGTCCAGTT
GTTGGGTGCTTATTGCTTACCACACTTGGCAGAGAAGTGGGATAATGTCGGTCTCCTAAT
AGAACCTTCTCTTCCACACCATGTGGACAGGATTTTTATCACAAATGATTTGACAGAACA
AGTACTCGACGAGGCGATTTCTCAAAAATGTGGCCTGATCGTTTCATACCATCCACCAAT
TTTTTCTCCTCTTAAAAAGCTTACGCAACAGCATTGGAAAGAGCGTATAGTTATACGTTG
TATAGAAAACAAAATTGGAGTATTT

consensusID : consensus_9555#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 247
fasta sequence

                              [TGATGCAAAACTTGGAGGTATCAACGATTGGCTTTTAGAACCATTAGGTAAATTCAAACTAACTTAATATTGTTCTATAGCTGTCAATCGAAGAGAAAGTTTATCTCGATCACCAATTACTCAAACTTTATCCAGGTTGACTGTTGTTATGAATGAAAATTTCGGAGACTTTGTCATATCCACAGGAGTAGGAGTGTGTGCAACTAATATTAAGAGCTATTGTTACTTGTACCGAGTCCGATTTAAA]

[+] EMBL CD192875             [TGATGCAAAACTTGGAGGTATCAACGATTGGCTTTTAGAACCATTAGGTAAATTCAAACTAACTTAATATTGTTCTATAGCTGTCAATCGAAGAGAAAGTTTATCTCGATCACCAATTACTCAAACTTTATCCAGGTTGACTGTTGTTATGAATGAAAATTTCGGAGACTTTGTCATATCCACAGGAGTAGGAGTGTGTGCAACTAATATTAAGAGCTATTGTTACTTGTACCGAGTCCGATTTAAA]




>consensus_9555#5
TGATGCAAAACTTGGAGGTATCAACGATTGGCTTTTAGAACCATTAGGTAAATTCAAACT
AACTTAATATTGTTCTATAGCTGTCAATCGAAGAGAAAGTTTATCTCGATCACCAATTAC
TCAAACTTTATCCAGGTTGACTGTTGTTATGAATGAAAATTTCGGAGACTTTGTCATATC
CACAGGAGTAGGAGTGTGTGCAACTAATATTAAGAGCTATTGTTACTTGTACCGAGTCCG
ATTTAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9555#0      AATGAATACCAGCTTCAGCTAATATTTAAGCATGCGAAATATAGCACAGAAGCAATAAAT 60
consensus_9555#1      ------------------------------------------------------------
consensus_9555#3      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
                                                                                  

consensus_9555#0      AAAATGAAAGAATGTGAAGTATGAAGTAACACTTAATATCAGCTACCATTAGACATCAGG 120
consensus_9555#1      ------------------------------------------------------------
consensus_9555#3      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
                                                                                  

consensus_9555#0      ATAGGTGGTAGTATCTTATTTGGGTTCAGCCGGTCAGCATTTTTTATGCAAGATTCTCTC 180
consensus_9555#1      ------------------------------------------------------------
consensus_9555#3      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
                                                                                  

consensus_9555#0      CAAAGAGACGCAGTCGTGGACCTCATTGTTAACCCTCCTCTCTCATCCAAGCTTGAGACA 240
consensus_9555#1      ------------------------------------------------------------
consensus_9555#3      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
                                                                                  

consensus_9555#0      GGAAATAATTTTAGAAAGGTTGTAAGCAAAGTTTAAGTTCAGCTATTGAATGTTATTTTC 300
consensus_9555#1      ------------------------------------------------------------
consensus_9555#3      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
                                                                                  

consensus_9555#0      AACTATGTTAATAGCACTAAAGGTCATAATTCTAAAATGACCTTTATTTTTTTCATTTTA 360
consensus_9555#1      ------------------------------------------------------------
consensus_9555#3      --GTGTGCAACTAATATTAAGAGT---AATGCTGGAATAACAGCTATTGTTACTTGTACC 55
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      --------------------------------------TTCAAGTAGCGAAACAGCGTCG 22
consensus_9555#4      ------------------------------------------------------------
                                                                                  

consensus_9555#0      TTTTCAAGGCTAGCATCTGTTAATGTATATAACTTGTTGTTATCAGGTTTT--TTGAA-- 416
consensus_9555#1      ------------------------------------------------------------
consensus_9555#3      GAGTCCGATTTAAAACGTGTCG-TAGATGTGACTGAGGAGTCTAAAATTTCAGTTGTT-- 112
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      AGTTTAGCTTCATTAGCCTTTGTCATCGTGTTCTCGATTTCATTAATACATGTTCCTTTC 82
consensus_9555#4      ------------------------------------------CGAGTTTAGCTTCATT-- 16
                                                                                  

consensus_9555#0      ATTACGGATTGAATACTTAAGTTATTTCAATCACTTTCACAAGG-ATTTATT--TTTATT 473
consensus_9555#1      ----------GGAGCCATAATTCGGCACGACGGCGATCACCAA----TTACT--CAAACT 44
consensus_9555#3      AGTATCGACACTATTCAGAAGACAAGTGAAGAAGGATGTGGAAG-ACTGGTCACTCTACA 171
consensus_9555#5      -----------------TGATGCAAAACTTGGAGG-TATCAACG-ATTGGCT--TTTAGA 39
consensus_9555#2      AAAGTTGGCCCAAAAAGGGATGGAGCTTACCAAAATTGTCCAGTTGTTGGATGCTTATTG 142
consensus_9555#4      AACCTTGGCCCAAAA-GGGATGGAGCTTACCAAAATTGTCCAGTTGTTGGGTGCTTATTG 75
                                         *                *    *     *            

consensus_9555#0      AT-TTCATGTTCTTTAACGTCCTAGAAATTCTGCTTTAGCCTCCTGGTATTTTGTTAACT 532
consensus_9555#1      TTATCCAGGTTGACTGTTGTTATGAA--------TGAAAATTTCGGAGACTTTGTCA--- 93
consensus_9555#3      GTTCCCAGTTCATCTAAAAGCAGTTA-------TCGCCGCCTACAAAAAGTTTCTGA--- 221
consensus_9555#5      ACCATTAGGTAAATTCAAACTAACTTAA------TATTGTTCTATAGCTGTCAATCG--- 90
consensus_9555#2      CTTACCACACTTGGCAGAGAAGTGGGATAATGTCGGTCTCCTAATAGAACCTTCTCT--- 199
consensus_9555#4      CTTACCACACTTGGCAGAGAAGTGGGATAATGTCGGTCTCCTAATAGAACCTTCTCT--- 132
                            *                                               *     

consensus_9555#0      GTCAATCACAACACTTATTTACCATAGTTTTTTTCTTTATTATTCAATAGACTGTCCAAT 592
consensus_9555#1      --TATCCACAGGAGTAG-------GAGTGTGTGCAACTAATATT-AAGAGACTGTCCAAT 143
consensus_9555#3      ---ACATGGGACATTTAACTGTAGCCCCAGGACTAGGTAAAACC--CTCGACTGTCCAAT 276
consensus_9555#5      ----AAGAGAAAGTTTA---------TCTCGATCACCAATTACT-CAAACTTTATCCAGG 136
consensus_9555#2      ----TCCACACCATGTGG--ACAGGATTTTTATCACAAATGATTTGACAGAACAAGTACT 253
consensus_9555#4      ----TCCACACCATGTGG--ACAGGATTTTTATCACAAATGATTTGACAGAACAAGTACT 186
                                                            *  *               *  

consensus_9555#0      TAAAACAGTTGCTGTTTGTGCTGGTTCCGGTGGGTCGCTTTTATGCCAAACACCAGCCTC 652
consensus_9555#1      TAAAACAGTTGCTGTTTGTGCTGGTTCCGGTGGGTCGCTTTTATGCCAAACACCAGCCTC 203
consensus_9555#3      TAAAACAGTTGCTGTTTGTGCTGGTTCCGGTGGGTCGCTTTTATGCCAAACACCAGCCTC 336
consensus_9555#5      TTGA-CTGTTGTTATGAATGAAAATTTCGGAGACTTTGTCATATCCACAGGAGTAGGAGT 195
consensus_9555#2      CGAC---GAGGCGATTTCTCAAAAATGTGGCCTGATCGTTTCATACCATCCACCAATTTT 310
consensus_9555#4      CGAC---GAGGCGATTTCTCAAAAATGTGGCCTGATCGTTTCATACCATCCACCAATTTT 243
                             *  *   *   *      *  **        *   ** *     *  *     

consensus_9555#0      ATTTGCTGCCGATTTATTTATCACTGGAGAATTATCT-CATCACGACCGTCTTGAGGCTG 711
consensus_9555#1      ATTTGCTGCCGATTTATTTATCACTGGAGAATTATCT-CATCACGACCGTCTTGAGGCTG 262
consensus_9555#3      ATTTGCTGCCGATTTATTTATCACTGGAGAATTATCT-CATCACGACCGTCTTGAGGCTG 395
consensus_9555#5      GTGTGCAACTAA--TATTAAGAGCT--ATTGTTACTTGTACCGAGTCCGATTTAAA---- 247
consensus_9555#2      TTCTCCTCTTAAAAAGCTTA-CGCAACAGCATTGTAA--AGAGCGTATAGTTATACGTTG 367
consensus_9555#4      TTCTCCTCTTAAAAAGCTTA-CGCAACAGCATTGGAA--AGAGCGTATAGTTATACGTTG 300
                       * * *     *     * *   *   *   **      *    *      *  *     

consensus_9555#0      TTTCTCGTG-GTATTTCTATTATTTTAGCTGGGCATTCTGTTACGGAAAGAGGATTNTTC 770
consensus_9555#1      TTTCTCGTG-GTATTTCTATTATTTTAGCTGGGCATTCTGTTACGGAAAGAGGATTTTTC 321
consensus_9555#3      TTTCTCGTG-GTATTTCTA----------------------------------------- 413
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      TATAGAAAACAAAATTGGAGTATTTTCACCACACACCGGGCTTGATGCAAAACTTGGAGG 427
consensus_9555#4      TATAGAAAACAAAATTGGAGTATTT----------------------------------- 325
                                                                                  

consensus_9555#0      AGGGAA-GATTTATCCCAGACTTTCGTCATCTTCTATCAACTGTACATAATGCCGGTGAA 829
consensus_9555#1      AAGGAAAGATTTATCCCAGACTTTCGTCATCTTCTATCAACTGTACATAATGCCGGTGAA 381
consensus_9555#3      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      TATCAACGATTGGCTTTTAGAACCATTAGCTGTCAATCGAAGAGAAAGTTTATCTCGATC 487
consensus_9555#4      ------------------------------------------------------------
                                                                                  

consensus_9555#0      ATCCCACATGTGGAATTGTTATTATCCGAGGCAGATCATGAACCAGGTTTTGTTGTTTAA 889
consensus_9555#1      ATCCCACATGTGGAATTGTTATTATCCGAGGCAGATCATGAACCAGGTTTTGTTGTTTAA 441
consensus_9555#3      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      ACCAATTACTCAAACTTT------------------------------------------ 505
consensus_9555#4      ------------------------------------------------------------
                                                                                  

consensus_9555#0      CAAATCGTTGTTATATTTGTGCGATTTTGTAGTATTCGATGTGTTACAACAGATATTTTT 949
consensus_9555#1      CAAATCGTTGTTATATTTGTGCGATTTTGTAGTATTCGATGTGTTACAACAGATATTTTT 501
consensus_9555#3      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
                                                                                  

consensus_9555#0      AATGGTTTCACAGTTTTTTCCCATTTCTTTAATACTGGATATTATTATTGATCGACTACC 1009
consensus_9555#1      AATGGTTTCACAGTTTTTTCCCATTTCTTTAATACTGGATATTATTATTGATCGACTACC 561
consensus_9555#3      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
                                                                                  

consensus_9555#0      AACTTGTATAATAAACCATAGCTATTATTCCGTTTGTTCTCAGATTTCAAATAATTGTTC 1069
consensus_9555#1      AACTTGTATAATAAACC------------------------------------------- 578
consensus_9555#3      ------------------------------------------------------------
consensus_9555#5      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
                                                                                  

consensus_9555#0      CTTTGCTCATCCAGTGTCAGAGTTACTA 1097
consensus_9555#1      ----------------------------
consensus_9555#3      ----------------------------
consensus_9555#5      ----------------------------
consensus_9555#2      ----------------------------
consensus_9555#4      ----------------------------