These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9582#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 919 fasta sequence [GTGCTTTCGCTTTTTCTGCATCCTCTTCATAAGCGCAATCAATAAAACCTGAACCTCTGCATCTTCCGTTGACAACCATTGCTTTGCAAGATTTGGGCTGAACAATGTTTTCAACAAGTGAACGAACTGTATCATCTGTACCAGATTCGCTTAATCCACTTATATATAGATTGGTCTTGGAAGTGACAGTTGATTTATTCCGACGACCATGCTGTGTTTGAGGAACAGAACCAAAGTGCTTTAATGAATCAAATGTACGGCAGTGTGCTGTCATATTAACTGCCATCGGTGTCTGTGATGGTACATTTGCATAAGTTTGATGTATGTGACCAAGGTTGCCATTACCCATAGCTGTTACTAGGGAAGGTGCTAAGTAAGACAACGACTGACCATATGGAACAGGTGGATGAGGCAAGGGTAAGGGCTGGGAAGCCGATTGTTGGAACTGTTGTAGGTGGTAAGAAGGATTTATGGAAGCATTGGGAAATTGACGCCCAGTAATAGCAGGTTCAAGCGACTGGTTGGTACCAACAGAGAATGAATGGGGGAAAGGGTAAGCCAAACTG-TGATGAGGACTGAATCCACCAGGTGCTGAAGGGATTGA-TGAGCCAGGTAAAACA-TTGGAAGAGAGAGTCGG-TCGTACATAACCAGGCGTAAGTGCACCAATAAGCATACTGCTAGAATCCATCGGACCAGAAACATGACGGTCAATGGATATTGCTGAGCCATTAGCAATGGTCGGATGACCTGACATCGCTGCAATGATAGGCCAGTGTGGTTGCATATCGTGAAAATTTCTTTTAATATTCGAAGAAATGAATTATTGCTGTTT-AATGTAACGTTAACGTTTAGCGCGTCGAAG-TTTGAATGAAAATCACATTAGCCGCATTTGTAAG-TTGGAAATAATAATTTAAAAAAC] [+] EMBL CD115317 [GTGCTTTCGCTTTTTCTGCATCCTCTTCATAAGCGCAATCAATAAAACCTGAACCTCTGCATCTTCCGTTGACAACCATTGCTTTGCAAGATTTGGGCTGAACAATGTTTTCAACAAGTGAACGAACTGTATCATCTGTACCAGATTCGCTTAATCCACTTATATATAGATTGGTCTTGGAAGTGACAGTTGATTTATTCCGACGACCATGCTGTGTTTGAGGAACAGAACCAAAGTGCTTTAATGAATCAAATGTACGGCAGTGTGCTGTCATATTAACTGCCATCGGTGTCTGTGATGGTACATTTGCATAAGTTTGATGTATGTGACCAAGGTTGCCATTACCCATAGCTGTTACTAGGGAAGGTGCTAAGTAAGACAACGACTGACCATATGGAACAGGTGGATGAGGCAAGGGTAAGGGCTGGGAAGCCGATTGTTGGAACTGTTGTAGGTGGTAAGAAGGATTTATGGAAGCATTGng ] [-] EMBL CD161087 [ TCAACAAGTGAACGAACTGTATCATCTGTATCAGATTCGCTTAATCCACTTATATATAGATTGGTCTTGGAAGTGACAGTTGATTTATTCCGACGACCATGCTGTGTTTGAGGAACAGAACCAAAGTGCTTTAAAGAATCAAATGTACGGCAGTGTGCTGTCATATTAACTGCCATCGGTGTCTGTGATGGTACATTTGCATAAGTTTGATGTATGTGACCAAGGTTGCCATTACCCATAGC ] [-] EMBL CD166920 [ TGGATGAGGCAAGGGTAAGGGCTGGGAAGCCGATTGTTGGAACTGTTGTAGGTGGTAAGAAGGATTTATGGAAGCATTGGGAAATTGACGCCCAGTAATAGCAGGTTCAAGCGACTGGTTGGTACCAACAGAGAATGAt ] [+] EMBL CD200675 [ GTTGGAACTGTTGTAGGTGGTAAGAAGGATTTATGGAAGCATTGGGAAATTGACGCCCAGTAATAGCAGGTTCAAGCGACTGGTTGGTACCAACAGGGAATGAATGGGGGAAAGGGTAAGCCAAACTG TGATGAGGACTGAATCCACCAGGTGCTGAAGGGATTGA TGAGCCAGGTAAAACA TTGGAAGAGAGAGTCGG TCGTACATAACCAGGCGTAAGTGCACCAATAAGCATACTGCTAGAATCCATCGGACCAGAAACATGACGGTCAATGGATATTGCTGAGCCATTAGCAATGGTCGGATGACCTG ] [+] EMBL CD114306 [ TCAAGCGACTGGTTGGTACCAACAGAGAATGAATGGGGGAAAGGGTAAGCCAAACTG TGATGAGGACTGAATCCACCAGGTGCTGAAGGGATTGA TGAGCCATGTAAAACA TTGGAAGAGAGAGTCGG TCGTACATAACCAGGCGTAAGTGCACCAATAAGCATACTGCTAGAATCCATCGGACCAGAAACATGACGGTCAATGGATATTGCTGAGCCATTAGCAATGGTCGGATGACCTGACATCGCTGCAATGATAGGCCAGTGTGGTTGCATATCGTGAAAATTTCTTTTAATATTCGAAGAAATGAATTATTGCTGCTT AATGTAACGTTAACGTTTATCGCGTCGAAG TTTGAATGAAAATCACATTAACCGCATTTGTAAG TTGGAAATAATAATTT ] [-] EMBL CD150675 [ actTGGTTGGTACCAACAGAGTATTAATTGGGGAAAGGGTAAGCCAAACTGTTGATTAGGACTGAATCCACCAGGTGCTGAAGGGATTGATTGAGCCGGGTAAAACATTTGGAAGAGAGAGTCGGTTCGTACATAACCAGGCGTAAGTGCACCAATTAGCATACTGCTAGAATCCATCGGACCAGAAACATGACGGTCAATGGATATCGCTGAGCCATTAGCAATGGTCGGATGACC ] [+] EMBL CD136241 [ TGGTACCAACAGAGAATGAATGGGGGAAAGGGTAAGCCAAACTG TGATGAGGACTGAATCCACCAGGTGCTGAAGGGATTGA TGAGCCAGGTAAAACA TTGGAAGAGAGAGTCGG CCGTACATAACCAGGCGTAAGTGCACCAATAAGCATACTGCTAGAATCCATCGGACCAGAAACATGACGGTCAATGGATATTGCTGAGCCATTAGCAATGGTCGGATGACCTGACATCGCTGCAATGATAGGCCAGTGTGGTTGCATATCGTGAAAATTTCTTTTAATATTCGAAGAAATGAATTATTGCTGTTT AATGTAACGTTAACGTTTAGCGCGTCGAAG TTTGAATG ] [+] EMBL CD193841 [ CAACAGAGAATGAATGGGGGAAAGGGTAAGCCAAACTG TGATGAGGACTGAATCCACCAGGTGCTGAAGGGATTGA TGAGCCAGGTAAAACA TTGGAAGAGAGAGTCGG TCGTACATAACCAGGCGTAAGTGCACCAATAAGCATACTGCTAGAATCCATCGGACCAGAAATATGACGGTCAATGGATATTGCTGAGCCATTAGCAATGGTCGGATGACCTGACATCGCTGCAATGATAGGCCAGTGTGGTTGCATATCGTGAAAATTTCTTTTAATATTCGAAGAAATGAATTATTGCTGTTT AATGTAACGTTAACGTTTAGCGCGTCGAAG TTTGAATGA ] [+] EMBL CD152665 [ GGGAAAGGGTGAGCCAAACTG TGATGAGGACTGAATCCACCACGTGCTGAAGGGATTGA TGAGCCAGGTAAAACA TTGGAAGAGAGAGTCGG TCGTACATAACCAGGCGTAAGTGCACCAATAAGCATACTGCTAGAATCCATCGGACCAGAAACATGACGGTCAATGGATATTGCTGAGCCATTAGCAATGGTCGGATGACCTGACATCGCTGCAATGATAGGCCAGTGTGGTTGCATATCGTGAAAATTTCTTTTAATATTCCAAGAAATGAATTATTGCTGTTTAAATGT ACGTTAACGTTTAACGCGTCGAAGCTTTGTATGACGATCACATTAGCCCGATTTGTAAGTTTGGAAAGTATAATTTAAAAAAC] [+] EMBL CD114491 [ G TGATGAGGACTGAATCCACCAGGTGCTGAAGGGATTGA TGAGCCAGGTAAAACA TTGGAAGAGAGAGTCGG TCGTACATAACCAGGCGTAAGTGCACCATTAAGCATACTGCTAGAATCCATCGGACCAGAAACATGACGGTCAATGGATATTGCTGAGCCATTAGCAATGGTCGGATGACCTGACATCGCTGCAATGATAGGCCAGTGTGGTTGCATATCGTGAAAATTTCTTTTAATATTCGAAGAAATGAATTATTGCTGTTT AATGTAACGTTAACGTTTAGCGCGTCGAAG TTTGAATGANAATCACATTAGCCGCTTTTGTAAG TTGGAAATAAGAATT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||