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Schistosoma mansoni
cluster # 9582 cluster # 9582       Sequences # 10       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9582#0 length = 919 sequences # 10  

consensusID : consensus_9582#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 919
fasta sequence
                              [GTGCTTTCGCTTTTTCTGCATCCTCTTCATAAGCGCAATCAATAAAACCTGAACCTCTGCATCTTCCGTTGACAACCATTGCTTTGCAAGATTTGGGCTGAACAATGTTTTCAACAAGTGAACGAACTGTATCATCTGTACCAGATTCGCTTAATCCACTTATATATAGATTGGTCTTGGAAGTGACAGTTGATTTATTCCGACGACCATGCTGTGTTTGAGGAACAGAACCAAAGTGCTTTAATGAATCAAATGTACGGCAGTGTGCTGTCATATTAACTGCCATCGGTGTCTGTGATGGTACATTTGCATAAGTTTGATGTATGTGACCAAGGTTGCCATTACCCATAGCTGTTACTAGGGAAGGTGCTAAGTAAGACAACGACTGACCATATGGAACAGGTGGATGAGGCAAGGGTAAGGGCTGGGAAGCCGATTGTTGGAACTGTTGTAGGTGGTAAGAAGGATTTATGGAAGCATTGGGAAATTGACGCCCAGTAATAGCAGGTTCAAGCGACTGGTTGGTACCAACAGAGAATGAATGGGGGAAAGGGTAAGCCAAACTG-TGATGAGGACTGAATCCACCAGGTGCTGAAGGGATTGA-TGAGCCAGGTAAAACA-TTGGAAGAGAGAGTCGG-TCGTACATAACCAGGCGTAAGTGCACCAATAAGCATACTGCTAGAATCCATCGGACCAGAAACATGACGGTCAATGGATATTGCTGAGCCATTAGCAATGGTCGGATGACCTGACATCGCTGCAATGATAGGCCAGTGTGGTTGCATATCGTGAAAATTTCTTTTAATATTCGAAGAAATGAATTATTGCTGTTT-AATGTAACGTTAACGTTTAGCGCGTCGAAG-TTTGAATGAAAATCACATTAGCCGCATTTGTAAG-TTGGAAATAATAATTTAAAAAAC]

[+] EMBL CD115317             [GTGCTTTCGCTTTTTCTGCATCCTCTTCATAAGCGCAATCAATAAAACCTGAACCTCTGCATCTTCCGTTGACAACCATTGCTTTGCAAGATTTGGGCTGAACAATGTTTTCAACAAGTGAACGAACTGTATCATCTGTACCAGATTCGCTTAATCCACTTATATATAGATTGGTCTTGGAAGTGACAGTTGATTTATTCCGACGACCATGCTGTGTTTGAGGAACAGAACCAAAGTGCTTTAATGAATCAAATGTACGGCAGTGTGCTGTCATATTAACTGCCATCGGTGTCTGTGATGGTACATTTGCATAAGTTTGATGTATGTGACCAAGGTTGCCATTACCCATAGCTGTTACTAGGGAAGGTGCTAAGTAAGACAACGACTGACCATATGGAACAGGTGGATGAGGCAAGGGTAAGGGCTGGGAAGCCGATTGTTGGAACTGTTGTAGGTGGTAAGAAGGATTTATGGAAGCATTGng                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD161087             [                                                                                                              TCAACAAGTGAACGAACTGTATCATCTGTATCAGATTCGCTTAATCCACTTATATATAGATTGGTCTTGGAAGTGACAGTTGATTTATTCCGACGACCATGCTGTGTTTGAGGAACAGAACCAAAGTGCTTTAAAGAATCAAATGTACGGCAGTGTGCTGTCATATTAACTGCCATCGGTGTCTGTGATGGTACATTTGCATAAGTTTGATGTATGTGACCAAGGTTGCCATTACCCATAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD166920             [                                                                                                                                                                                                                                                                                                                                                                                                                   TGGATGAGGCAAGGGTAAGGGCTGGGAAGCCGATTGTTGGAACTGTTGTAGGTGGTAAGAAGGATTTATGGAAGCATTGGGAAATTGACGCCCAGTAATAGCAGGTTCAAGCGACTGGTTGGTACCAACAGAGAATGAt                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD200675             [                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTTGGAACTGTTGTAGGTGGTAAGAAGGATTTATGGAAGCATTGGGAAATTGACGCCCAGTAATAGCAGGTTCAAGCGACTGGTTGGTACCAACAGGGAATGAATGGGGGAAAGGGTAAGCCAAACTG TGATGAGGACTGAATCCACCAGGTGCTGAAGGGATTGA TGAGCCAGGTAAAACA TTGGAAGAGAGAGTCGG TCGTACATAACCAGGCGTAAGTGCACCAATAAGCATACTGCTAGAATCCATCGGACCAGAAACATGACGGTCAATGGATATTGCTGAGCCATTAGCAATGGTCGGATGACCTG                                                                                                                                                                            ]
[+] EMBL CD114306             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCAAGCGACTGGTTGGTACCAACAGAGAATGAATGGGGGAAAGGGTAAGCCAAACTG TGATGAGGACTGAATCCACCAGGTGCTGAAGGGATTGA TGAGCCATGTAAAACA TTGGAAGAGAGAGTCGG TCGTACATAACCAGGCGTAAGTGCACCAATAAGCATACTGCTAGAATCCATCGGACCAGAAACATGACGGTCAATGGATATTGCTGAGCCATTAGCAATGGTCGGATGACCTGACATCGCTGCAATGATAGGCCAGTGTGGTTGCATATCGTGAAAATTTCTTTTAATATTCGAAGAAATGAATTATTGCTGCTT AATGTAACGTTAACGTTTATCGCGTCGAAG TTTGAATGAAAATCACATTAACCGCATTTGTAAG TTGGAAATAATAATTT       ]
[-] EMBL CD150675             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   actTGGTTGGTACCAACAGAGTATTAATTGGGGAAAGGGTAAGCCAAACTGTTGATTAGGACTGAATCCACCAGGTGCTGAAGGGATTGATTGAGCCGGGTAAAACATTTGGAAGAGAGAGTCGGTTCGTACATAACCAGGCGTAAGTGCACCAATTAGCATACTGCTAGAATCCATCGGACCAGAAACATGACGGTCAATGGATATCGCTGAGCCATTAGCAATGGTCGGATGACC                                                                                                                                                                              ]
[+] EMBL CD136241             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGGTACCAACAGAGAATGAATGGGGGAAAGGGTAAGCCAAACTG TGATGAGGACTGAATCCACCAGGTGCTGAAGGGATTGA TGAGCCAGGTAAAACA TTGGAAGAGAGAGTCGG CCGTACATAACCAGGCGTAAGTGCACCAATAAGCATACTGCTAGAATCCATCGGACCAGAAACATGACGGTCAATGGATATTGCTGAGCCATTAGCAATGGTCGGATGACCTGACATCGCTGCAATGATAGGCCAGTGTGGTTGCATATCGTGAAAATTTCTTTTAATATTCGAAGAAATGAATTATTGCTGTTT AATGTAACGTTAACGTTTAGCGCGTCGAAG TTTGAATG                                                  ]
[+] EMBL CD193841             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAACAGAGAATGAATGGGGGAAAGGGTAAGCCAAACTG TGATGAGGACTGAATCCACCAGGTGCTGAAGGGATTGA TGAGCCAGGTAAAACA TTGGAAGAGAGAGTCGG TCGTACATAACCAGGCGTAAGTGCACCAATAAGCATACTGCTAGAATCCATCGGACCAGAAATATGACGGTCAATGGATATTGCTGAGCCATTAGCAATGGTCGGATGACCTGACATCGCTGCAATGATAGGCCAGTGTGGTTGCATATCGTGAAAATTTCTTTTAATATTCGAAGAAATGAATTATTGCTGTTT AATGTAACGTTAACGTTTAGCGCGTCGAAG TTTGAATGA                                                 ]
[+] EMBL CD152665             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGGAAAGGGTGAGCCAAACTG TGATGAGGACTGAATCCACCACGTGCTGAAGGGATTGA TGAGCCAGGTAAAACA TTGGAAGAGAGAGTCGG TCGTACATAACCAGGCGTAAGTGCACCAATAAGCATACTGCTAGAATCCATCGGACCAGAAACATGACGGTCAATGGATATTGCTGAGCCATTAGCAATGGTCGGATGACCTGACATCGCTGCAATGATAGGCCAGTGTGGTTGCATATCGTGAAAATTTCTTTTAATATTCCAAGAAATGAATTATTGCTGTTTAAATGT ACGTTAACGTTTAACGCGTCGAAGCTTTGTATGACGATCACATTAGCCCGATTTGTAAGTTTGGAAAGTATAATTTAAAAAAC]
[+] EMBL CD114491             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     G TGATGAGGACTGAATCCACCAGGTGCTGAAGGGATTGA TGAGCCAGGTAAAACA TTGGAAGAGAGAGTCGG TCGTACATAACCAGGCGTAAGTGCACCATTAAGCATACTGCTAGAATCCATCGGACCAGAAACATGACGGTCAATGGATATTGCTGAGCCATTAGCAATGGTCGGATGACCTGACATCGCTGCAATGATAGGCCAGTGTGGTTGCATATCGTGAAAATTTCTTTTAATATTCGAAGAAATGAATTATTGCTGTTT AATGTAACGTTAACGTTTAGCGCGTCGAAG TTTGAATGANAATCACATTAGCCGCTTTTGTAAG TTGGAAATAAGAATT        ]


>consensus_9582#0 GTGCTTTCGCTTTTTCTGCATCCTCTTCATAAGCGCAATCAATAAAACCTGAACCTCTGC ATCTTCCGTTGACAACCATTGCTTTGCAAGATTTGGGCTGAACAATGTTTTCAACAAGTG AACGAACTGTATCATCTGTACCAGATTCGCTTAATCCACTTATATATAGATTGGTCTTGG AAGTGACAGTTGATTTATTCCGACGACCATGCTGTGTTTGAGGAACAGAACCAAAGTGCT TTAATGAATCAAATGTACGGCAGTGTGCTGTCATATTAACTGCCATCGGTGTCTGTGATG GTACATTTGCATAAGTTTGATGTATGTGACCAAGGTTGCCATTACCCATAGCTGTTACTA GGGAAGGTGCTAAGTAAGACAACGACTGACCATATGGAACAGGTGGATGAGGCAAGGGTA AGGGCTGGGAAGCCGATTGTTGGAACTGTTGTAGGTGGTAAGAAGGATTTATGGAAGCAT TGGGAAATTGACGCCCAGTAATAGCAGGTTCAAGCGACTGGTTGGTACCAACAGAGAATG AATGGGGGAAAGGGTAAGCCAAACTGTGATGAGGACTGAATCCACCAGGTGCTGAAGGGA TTGATGAGCCAGGTAAAACATTGGAAGAGAGAGTCGGTCGTACATAACCAGGCGTAAGTG CACCAATAAGCATACTGCTAGAATCCATCGGACCAGAAACATGACGGTCAATGGATATTG CTGAGCCATTAGCAATGGTCGGATGACCTGACATCGCTGCAATGATAGGCCAGTGTGGTT GCATATCGTGAAAATTTCTTTTAATATTCGAAGAAATGAATTATTGCTGTTTAATGTAAC GTTAACGTTTAGCGCGTCGAAGTTTGAATGAAAATCACATTAGCCGCATTTGTAAGTTGG AAATAATAATTTAAAAAAC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)