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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9589#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1795 fasta sequence
[GCTGACTTTCGAAAGCACACACAGTCTAAGGGATTCATATTCCAATGGCCGAATACTACAGCCGGGACTATGACGCACCAGTAGATCGTAGTAACATCGAAGTCTGTCACATGTCCGGAGATAATTCTACTGCAGTCTCTGTCAAGGAGTATCGTCAACCCCACCACAACCATGTAAATAATAAGGATGATTGTCATCTGGTTTCTGCGTCCAGTGAGAGGAGACAGTCACCTGAGACGAAATATGACTGCAGAAACAATGGTCGAAGTCGCAGTAAGAAGCGCGAACGACGGTCACGCAGTCGTGACCGTCGGCGACGTAGTAGAAGTCGACGTCGTGATCGTAGTAGGGAACATAAATCTAGACGACACCATTCTCGTCATCGGTCATCCTCTACGTAGGCGCATAAATACTGGGATGTACCACCACCTGGTTTCGAACACGTCACGCCTGCTCAATATAAAGCTCTGCAAACATTGGGGCAAGTACCGGTTAATGTGTATGCTGCCGGACAAGTGCCAATGCCGGTCCATGC-TTCAA-ATGCTCCTCTAA-CACTTACTACCAATGTACCG-TTGCTGGAAGTGCTGTATGCAGACAAGCACGTCGCCTGTATGTTGGAAACATACCGTTCACAGCAACTGAAGAGAATATGATGGAATTCTTTAACAAGCAAATGAGGGCTCAAGGTCTCATTCAGGCTGAGGGTAACCCTATAATTGCCGTGCAAATTAACATGGAAAAGAATTTTGCCTTTCTCGAGTTTCGTTCTGTTGATGAGACTACTCAGGGTTTGGCACTCGATGGNGTTCTGTTTCAAAATCAAGCCCTCAAGCTTCGCCGACCTCGCGATTACGCTCCGTTACCCGGTGTTTCTGAACAGCCATCGGTCATTGTCCCAGGAGTAGTAAGCACGGTCGTTCAGGATTCTCCACATAAGATTTTCGTAGGTGGTCTCCCCAATTATCTAAATGAAGATCAAGTTAAAGAACTGCTACTGAGCTTTGGTCCCTTAAAAGGATTTAATCTTGTTAAAGATGGCTCAACCGGTTTGTCGAAAGGTTACGCTTTTTGTGAGTATGTGGACGGTAATGTTACAGATCATGCATGTGCCGGTCTAAATGGTATGCAGTTAGGTGACAAGAAACTTATTGTTCAAAGAGCTAGCGTCGGAGCAAAGCACACGACCGGTGTATTACCTCAAAGCTTGTTGCAACTACCCGGCTTGGAAGATGGCGCAGTCCAAAATACAACTGGCTCCGGCAACCTTACAATCCGTAGTGGTGGACCGCCAACAGAGGTTTTGTGCTTGATGAATATGATCGAGACATCAGAGTTGGAAGATGATGAAGAATATGAAGATATAGTTGAAGATGTCCGTGCAGAATGTAGCAAGTACGGGGTCGTACGGAGTTTAGAAATACCTAGGCCAATTCCTGGAATTGAAGTTCCCGGTGTCGGAAAAATATACGTCGAGTTCGCAAGCTTGATCGATTGCCAGAAAGCTGCAACCGCTCTAACAGGTCGTAAGTTCAACCAGCGTCTGGTCGTCACCTCGTTCTTCAGTCCCAATAGTTATCACCGTAGGGAATTCTAACTGTTGCTGTTTATCTGTATATAAAACAAACCTTGGACATTCTACTCATTGCAATTTATTCTGTTAGTAATATTGAAGTAAGAAACCTGATGATTCAATAAGGGTTTACTTATTGTATTGTAATCTTTTCATTGGGATGTTATAAATCGGGCGTAAATATATTAAAAACGTTCGTTGTCATTGTTAAAAAAAAAAAAAAAA]
[+] EMBL BF936362 [GCTGACTTTCGAAAGCACACACAGTCTAAGGGATTCATATTCCAATGGCCGAATACTACAGCCGGGACTATGACGCACCAGTAGATCGTAGTAACATCGAAGTCTGTCACATGTCCGGAGATAATTCTACTGCAGTCTCTGTCAAGGAGTATCGTCAACCCCACCACAACCATGTTAATAATAAGGAAGATTGTCATCTGGTTTCTGCGTCCAGTGAGAGGAGACAGTCACCTGAGACGAAATATGACTGCAGAAACAATGGTCGAAGT ]
[+] EMBL AI976638 [GCTGACTTTCGAAAGCACACACAGTCTAAGGGATTCATATTCCAATGGCCGAATACTACAGCCGGGACTATGACGCACCAGTAGATCGTAGTAACATCGAAGTCTGTCACATGTCCGGAGATAATTCTACTGCAGTCTCTGTCAAGGAGTATCGTCAACCCCACCACAACCATGTAAATAATAAGGATGATTGTCATCTGGTTTCTGCGTCCAGTGAGAGGAGACAGTCACCTGAGACGAAATATGACTGCAGAAACAATGGTCGAAGTCGCAGTAAGAAGCGCGAACGACGGTCACGCAGTCGTGACCGTCGGCGACGTAGTAGAAGTCGACGTCGTGATCGTAGTAGGGAACATAAATCTAGACGACACCATTCTCGTCATCGGTCATCCTCTACGTAGGCGCATAAATACTGGGATGTACCACCACCTGGTTTCGAACACGTCACGCCTGCTCAATATAAAGCTCTGCAAACATTGGGGCAAGTACCGGTTAATGTGTATGCTGCCGGACAAGTGCCAATGCCGGTCCATGC TTCAA ATGCTCCTCTAA CACTTACTA ]
[+] EMBL BF936360 [GCTGACTTTCGAAAGCACACACAGTCTAAGGGATTCATATTCCAATGGCCGAATACTACAGCCGGGACTATGACGCACCAGTAGATCGTAGTAACATCGAAGTCTGCCACATGTCCGGAGATAATTATACTGCAGTCTCTGTCAAGGAGTATCGTCAACCCCACCACAACCATGTAAATAATAAGGATGATTGTCATCTGGTTTCTGCGTCCAGTGAGAGGAGACAGTCACCTGAGACGAAATATGACTGCGGAAACAATGGTCGAAGTCGCAGTAAGAAGCGCGAACGACGGTCACGCATTCGTGACCGTCGGCGACGTAGTAGA ]
[+] EMBL AI976561 [ GCAGTCGTGACCGTCGGCGACGTAGTAGAAGTCGACGTCGTGATCGTAGTAGGGAACATAAATCTAGACGACACCATTCTCGTCATCGGTCATCCTCTACGTCGGCGCATAAATACTGGGATGTACCACCACCTGGTTTCGAACACGTCACGCCTGCTCAATATAAAGCTCTGCAAACATCGGGGCAAGTACCGGTTAATGTGTATGCTGCCGGACAAGTGCCAATGCCGGTCCATGC TTCCA ATGCTTCTCTTA CACTTACTACCAATGTACCGTTTGCTGGAAGTGCTGTATGCAGACAAGCACGTCGCCTGTATGTTGGAAACATACCGTTCACAGCAACTGAAGAGAATATGATGGAATTCTTTAACAAGCAAATGAGGGCTCAAGGTCTCATTCAGGCTGAGGGTAACCCTATAATTGCCGTGCAAATTAACATGGAAAAGAATTTTGCCTTTCTCGAGTTTCGTTCTGTTGATGAGACTACTCAGGGTTTGGCACTCGATGGNGTTCTGTT ]
[+] EMBL CD068958 [ CATGCGTCCAACATGCTCCTCTAATCACTTACTACCAATGTACCG TTGCTGGAAGTGCTGTATGCAGACAAGCACGTCGCCTGTATGTTGGAAACATACCGTTCACAGCAACTGAAGAGAATATGATGGAATTCTTTAACAAGCAAATGAGGGCTCAAGGTCTCATTCAGGCTGAGGGTAACCCTATAATTGCCGTGCAAATTAACATGGAAAAGAATTTTGCCTTTCTCGAGTTTCGTTCTGTTGATGAGACTACTCAGGGTTTGGCACTCGATGGGGTTCTGTTTCAAAATCAAGCCCTCAAGCTTCGCCGACCTCGCGATTACGCTCCGTTACCCGGTGTTTCTGAACAGCCATCGGTCATTGTCCCAGGAGTAGTAAGCACGGTCGTTCAGGATTCTCCACATAAGATTTTCGTAGGTGGTCTCCCCAATTATCTAAATGAAGATCAAGTTAAAGAACTGCTACTGAGCTTTGGTCCCTTAAA ]
[+] EMBL CD059692 [ TCCGTTACCCGGTGTTTCTGAACAGCCATCGGTCATTGTCCCAGGAGTAGTAAGCACGGTCGTTCAGGATTCTCCACATAAGATTTTCGTTGGTGGTCTCCCCAATTATCTAAATGAAGATCAAGTTAAAGAACTGCTACTGAGCTTTGGTCCCTTAAAAGGATTTAATCTTGTTAAAGATGGCTCAACCGGTTTGTCGAAAGGTTACGCTTTTTGTGAGTATGTGGACGGTAATGTTACAGATCATGCATGTGCCGGTCTAAATGGTATGCAGTTAGGTGACAAGAAACTTATTGTTCAAAGAGCTAGCGTCGGAGCAAAGCACACGACCGGTGTATTACCTCAAAGCTTGTTGCAACTACCCGGCTTGGAAGATGGCGCAGTCCAAAATACAACTGGCTCCGGCAACCTTACAATCCGTAGTGGTGGACCGCCAACAGAGGTTTTGTGCTTGATGAATACGATCGAGACATCAGAGTTGGAAGATGATGAAGAATATGAAGATATAGTTGAAGATGTCCGTGCAGAATGTAGCAAGTACGGGGTCGTACGGAGTTTAAAAATACCTAGGCCAATTCCTGGAATTGAAATTCCTGGTGTCG ]
[+] EMBL CD077770 [ TTTTCGTGAGTATGTGGACGGTAATGTTACAGATCATGCATGTGCCGGTCTAAATGGTATGCAGTTAGGTGACAAGAAACTTATTGTTCAAAGAGCTAGCGTCGGAGCAAAGCACACGACCGGTGTATTACCTCAAAGCTTGTTGCAACTACCCGGCTTGGAAGATGGCGCAGTCCAAAATACAACTGGCTCCGGCAACCTTACAATCCGTAGTGGTGGACCGCCAACAGAGGTTTTGTGCTTGATGAATATGATCGAGACA ]
[+] EMBL CD133312 [ TGTATTACCTCAAAGCTTGTTGCAACTACCCGGCTTGGAAGATGGCGCAGTCCAAAATACAACTGGCTCCGGCAACCTTACAATCCGTAGTGGTGGACCGCCAACAGAGGTTTTGTGCTTGATGAATATGATCGAGACATCAGAGTTGGAAGATGATGAAGAATATGAAGATATAGTTGAAGATGTCCGTGCAGAATGTAGCAAGTACGGGGTCGTACGGAGTTTAGAAATACCTAGGCCAATTCCTGGAATTGAAGTTCCCGGTGTCGGAAAAATATACGTCGAGTTCGCAAGCTTGATCGATTGCCAGAAAGCTGCAACCGCTCTAACAGGTCGTAAGTTCAACCAGCGTCTGGTCGTCACCTCGTTCTTCAGTCCCAATAGTTATCACCGTAGGGAATTCTAACTGTTGCTGTTCATCTGTATA ]
[-] EMBL AI395140 [ ATGATGAAGAATATGAAGATATAGTTGANGATGTCCGTGCAGAATGTAGCAAGTACGGGGTCGTACGGAGTTTAGAAATACCTAGGCCAATTCCTGGAATTGAAGTTCCCGGTGTCGGAAAAATATACGTCGAGTTCGCAAGCTTGATCGATTGCCAGAAAGCTGCAACCGCTCTAACAGGTCGTAAGTTCAACCAGCGTCTGGTCGTCACCTCGTTCTTCAGTCCCAATAGTTATCACCGTAGGGAATTCTAACTGTTGCTGTTTATCTGTATATAAAACAAACCTTGGACATTCTACTCATTGCAATTTATTCTGTTAGTAATATTGAAGTAAGAAACCTGATGATTCAATAAGGGTTTACTTATTGTATTGTAATCTTTTCATTGGGATGTTATAAATCGGGCGTAAATATATTAAAAACGTTCGTTGTCATTGTTAAAAAAAAAAAAAAAA]
[-] EMBL AI394776 [ GTGCAGAATGTAGCAAGTACGGGGTCGTACGGAGTTTAGAAATACCTAGGCCAATTCCTGGAATTGAAGTTCCCGGTGTCGGAAAAATATACGTCGAGTTCGCAAGCTTGATCGATTGCCAGAAAGCTGCAACCGCTCTAACAGGTCGTAAGTTCAACCAGCGTCTGGTCGTCACCTCGTTCTTCAGTCCCAATAGTTATCACCGTAGGGAATTCTAACTGTTGCTGTTTATCTGTATATAAAACAAACCTTGGACATTCTACTCATTGCAATTTATTCTGTTAGTAATATTGAAGTAAGAAACCTGATGATTCAATAAGGGTTTACTTATTGTATTGTAATCTTTTCATTGGGATGTTATAAATCGGGCGTAAATATATTAAAAACGTTCGTTGTCATTGTTAAAAAAAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||