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Schistosoma mansoni
cluster # 9590 cluster # 9590       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9590#0 length = 818 sequences # 5  
consensus_9590#1 length = 705 sequences # 3  
consensus_9590#2 length = 562 sequences # 1  
consensus_9590#3 length = 479 sequences # 1  

consensusID : consensus_9590#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 818
fasta sequence
                              [CAACATTACCACTTACACACCATCTTAATCTCTTCTTAATTCATCACGACTCATTTATTATAAAACTCTAGCCACATTACGTCCTCTCAATCCTATCACATACACTTGCACACATTACAGTCATGAAAATATGTGGAGAGCAGGACAGCACGTTGAAAATACTCAAGTGTCTGGATGAGAGTCGCTTACATTTGAACAACA-ACATTGCCTGTG-TGTTTACA-T-AAATCAACA-GATAAATAAAC-GTAAAATACCCTCTCTTCAATAAGTC-ATCGTTTCGACTTACTACAATTACAAATTATCAACCATATGACTCAAACACATAGCCAGCT-T-TTAATCCATACTATATGACATTATGATCGTTACCAATACCATTAAAGTTAACAGGCACAAAGACGAAGTCAAAGATAAATCAGAAAAACC-ATTTGATTAC-TTATACTGT-GGTGTG-GTCTACTTATATCCATATAAGTAGTATATGGTGTGGGTCAGACATAGAATGTATTTCGGCAGAAGACCGATGAGGAAAGAACTGAAATGAAACGCAAACGTCTGGAAAATGCATGAGCAATGAAATAAGAGAAGAAACAGTGAAGATTGAAACAATTGGTTGTTAATTTGCAAATTGACTGTTCATTGTTTGGTAATCAGAATTTATTGAGATAGTCTGTAATCTTTGCTTAAATACATTCGATTGTCCCCAACTAGTGTTTTGTTCACTACATTTGGTGTCGCTGCCAACCAGGAGGAGGAAGGGTGCTGTTCTGCGGACGCCGCTGCGGGTCTGGAGTTGCGGTGCTAGTTGGGCCAGTCTGGTGTGGAGA]

[+] EMBL CD085114             [CAACATTACCACTTACACACCATCTTAATCTCTTCTTAATTCATCACGACTCATTTATTATAAAACTCTAGCCACATTACGTCCTCTCAATCCTATCACATACACTTGCACACATTACAGTCATGAAAATATGTGGAGAGCAGGACAGCACGTTGAAAATACTCAAGTGTCTGGATGAGAGTCGCTTACATTTGAACAACA ACATTGCCTGTG TGTTTACA T AAATCAACA GATAAATAAAC GTAAAATACCCTCTCTTCAATAAGTC ATCGTTTCGACTTACTACAATTACAAATTATCAACCATATGACTCAAACACATAGCCAGCT T TTAATCCATACTATATGACATTATGATCGTTACCAATACCATTAAAGTTAACAGGCACAAAGACGAAGTCAAAGATAAATCAGAAAAACC ATTTGATTAC TTATACTGT GGTGTG GTCTACTTATATCCATATAAGTAGTATATGGTGTGGGTCAGACATAGAATGTATTTCGGCAGAAG                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD150446             [          ACTTACACACCATCTTAATCTCTTCTTAATTCATCACGACTCATNTATTATANAACTCTAGCCACATTACGTCCTCTCAATCCTATCACATACACTTGCACACATTACAGTCATGAAAATATGTGGAGAGCAGGACAGCACGTTGAAAATACTCAAGTGTCTGGATGAGAGTCGCTTACATTTGAACAACA ACATTGCGTGTG TGTTNACA T AAATCAACA GATAAATAAAC GTAAAATACCCTCTCTTCAATAAGTC ATCGTTTCGACTTACTACAATTACAAATTATCAACCATATGACTCAAACACATAGCCAGCT T TTAATCCATACTATATGACATTATGATCGTTACCAATACCATTAAAGTTAACAGGCACAAAGACGAAGTCAAAGATAAATCAGAAAAACC ATTTGATTAC TTATACTGT GGCGTG GTCTACTTATATCCATATAA                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD112753             [                        TTAATCTCTTCTTAATTCATCACGACTCATTTATTATAAAACTCTAGCCACATTACGTCCTCTCAATCCTATCACATACACTTGCACACATTACAGTCATGAAAATATGTGGAGAGCAGGACAGCACGTTGAAAATACTCAAGTGTCTGGATGAGAGTCGCTTACATTTGTACAACACACATGATCTGTGAGGTCAACAGTAAAATCAACAGGATAAATAAACGGTACAATACCGTCTCTTCAATAAATCAATCCTTTCGACTTACTACTATTACAAATGATCAACCATATGACTCAAACACATAGCCAGCTGTATTAATCCATACTATATGACATTATGATCGTTACCAATACCATTAAAGTTAACAGGCACAAAGACGAAGTCAAAGATAAATCAGAAAAACCAATTTGATTACATTATAGTGTCGGTGTGTGTCTACTTATAT CATATAAcg                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD112712             [                                                     TTTATTATAAAACTCTAGCCACATTACGTCCTCTCAATCCTATCACATACACTTGCACACATTACAGTCATGAAAATATGTGGAGAGCAGGACAGCACGTTGAAAATACTCAAGTGTCTGGATGAGAGTCGCTTACATTTGAACAACA ACATTGCCTGTG TGTTTACA T AAATCAACA GATAAATAAAC GTAAAATACCCTCTCTTCAATAAGTC ATCGTTTCGACTTACTACAATTACAAATTATCAACCATATGACTCAAACACATAGCCAGCT T TTAATCCATACTATATGACATTATGATCGTTACCAATACCATTAAAGTTAACAGGCACAAAGACGAAGTCAAAGATAAATCAGAAAAACC ATTTGATTAC TTATACTGT GGTGTG GTCTACTTATATCCATATAA                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD084784             [                                                                                                                                                                                                                                                                                                                           GACTCAAACACATAGCCAGCT T TTAATCCATACTATATGACATTATGATCGTTACCAATACCATTAAAGTTAACAGGCACAAAGACGAAGTCAAAGATAAATCAGAAAAACC ATTTGATTAC TTATACTGT GGTGTG GTCTACTTATATCCATATAAGTAGTATATGGTGTGGGTCAGACATAGAATGTATTTTGGCAGAAGACCGATGAGGAAAGAACTGAAATGAAACGCAAACGTCTGGAAAATGCATGAGCAATGAAATAAGAGAAGAAACAGTGAAGATTGAAACAATTGGTTGTTAATTTGCAAATTGACTGTTCATTGTTTGGTAATCAGAATTTATTGAGATAGTCTGTAATCTTTGCTTAAATACATTCGATTGTCCCCAACTAGTGTTTTGTTCACTACATTTGGTGTCGCTGCCAACCAGGAGGAGGAAGGGTGCTGTTCTGCGGACGCCGCTGCGGGTCTGGAGTTGCGGTGCTAGTTGGGCCAGTCTGGTGTGGAGA]


>consensus_9590#0 CAACATTACCACTTACACACCATCTTAATCTCTTCTTAATTCATCACGACTCATTTATTA TAAAACTCTAGCCACATTACGTCCTCTCAATCCTATCACATACACTTGCACACATTACAG TCATGAAAATATGTGGAGAGCAGGACAGCACGTTGAAAATACTCAAGTGTCTGGATGAGA GTCGCTTACATTTGAACAACAACATTGCCTGTGTGTTTACATAAATCAACAGATAAATAA ACGTAAAATACCCTCTCTTCAATAAGTCATCGTTTCGACTTACTACAATTACAAATTATC AACCATATGACTCAAACACATAGCCAGCTTTTAATCCATACTATATGACATTATGATCGT TACCAATACCATTAAAGTTAACAGGCACAAAGACGAAGTCAAAGATAAATCAGAAAAACC ATTTGATTACTTATACTGTGGTGTGGTCTACTTATATCCATATAAGTAGTATATGGTGTG GGTCAGACATAGAATGTATTTCGGCAGAAGACCGATGAGGAAAGAACTGAAATGAAACGC AAACGTCTGGAAAATGCATGAGCAATGAAATAAGAGAAGAAACAGTGAAGATTGAAACAA TTGGTTGTTAATTTGCAAATTGACTGTTCATTGTTTGGTAATCAGAATTTATTGAGATAG TCTGTAATCTTTGCTTAAATACATTCGATTGTCCCCAACTAGTGTTTTGTTCACTACATT TGGTGTCGCTGCCAACCAGGAGGAGGAAGGGTGCTGTTCTGCGGACGCCGCTGCGGGTCT GGAGTTGCGGTGCTAGTTGGGCCAGTCTGGTGTGGAGA



consensusID : consensus_9590#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 705
fasta sequence
                              [GTCATCGCGCCGGAGACTCGACATTCTGACGGAAAGTTTGGCACATACTGTATTGGAAGAAGATTGCGGCTTGGCGAGCAGAACCACCGCATGGTCGAATGCTTTAAAGGGGGGACGAGTGTGGTGTGGTCTACTTATATCTATATAAGTAGTATATGGTGTTGGTCAGACATAGAATGTATTTTGCCAGAAGACCGATGTGCAAAGAACTGAAATGAAGCGCAATCGTTTGGAAAATGCATGAGCAATGAAATTAGAGAAGAAACAGAGAAGATTGAAACAATTGGTTGTTAATTTGCAAATTGACTGTTCATTGTTTGGTTATCAGAATTTACTGAGATAGTCTGTAATTTTTGCTTAAATACATTCGATTGTCCCCAACCAGTGTTTTGTTCACTACAGTGTGACTGGTATGATATTAAAATTCAATTTGAAATGGTTTAGATTATTCCATCGTTGATATTTTTGACTGGAATGTGATTAGTCTTGGTTGAGACATGGGTATCCAGCAGTTAAATTTAGGCACCCCACATAGGACGCTCATATACCAGCCAAGACTAATCATATTTCACTCANAAATATCATCAACA-GCAAAATTCAAACCATTTCANATTGCAATAATATAACGCGTAAAATTGTTGCATATTTATTATTAATCTTAACAACAGTATGANATTTGCTAGTGTTTAATGTACCTCTAGTATG]

[+] EMBL BG931152             [GTCATCGCGCCGGAGACTCGACATTCTGACGGAAAGTTTGGCACATACTGTATTGGAAGAAGATGGCGGCTTGGCGAGCAGAATCACCGCATGGTCGAATGCTTTAAAGGGGGGACGAGTGTGGTATGGTCTACTTATATCTATATAAGTAATATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD129927             [                                                             GATTGCGGCTTGGCGAGCAGAACCACCGCATGGTCGAATGCTTTAAAGGGGGGACGAGTGTGGTGTGGTCTACTTATATCTATATAAGTAGTATATGGTGTTGGTCAGACATAGAATGTATTTTGCCAGAAGACCGATGTGCAAAGAACTGAAATGAAGCGCAATCGTTTGGAAAATGCATGAGCAATGAAATTAGAGAAGAAACAGAGAAGATTGAAACAATTGGTTGTTAATTTGCAAATTGACTGTTCATTGTTTGGTTATCAGAATTTACTGAGATAGTCTGTAATTTTTGCTTAAATACATTCGATTGTCCCCAACCAGTGTTTTGTTCACTACAGTGTGACTGGTATGATATTAAAATTCAATTTGAAATGGTTTAGATTATTCCATCGTTGATATTTTTGACTGGAATGTGATTAGTCTTGGTTGAGACATGGGTATCCAGCAGTTAAATTTAGGCACCCCACATAGGACGCTCATATACCAGCCAAGACTAATCATATTTCACTCANAAATATCATCAACA GCAAAATTCAAACCATTTCANATTGCAATAATATAACGCGTAAAATTGTTGCATATTTATTATTAATCTTAACAACAGTATGANATTTGCTAGTGTTTAATGTACCTCTAGTATG]
[+] EMBL CD129939             [                                                             GATTGCGGCTTCGCGAGCAGAACCACCGCATGGTCGAATGCTTTAAAGGGGGGACGAGTGTGGTGTGGTCTACTTATATCTATATAAGTAGTATATGGTGTTGGTCAGACATAGAATGTATTTTGCCAGAAGACCGATGTGCAAAGAACTGAAATGAAGCGCAATCGTTTGGAAAATGCATGAGCAATGAAATTAGAGAAGAAACAGAGAAGATTGAAACAATTGGTTGTTAATTTGCAAATTGACTGTTCATTGTTTGGTTATCAGAATTTACTGAGATAGTCTGTAATTTTTGCTTAAATACATTCGATTGTCCCCAACCAGTGTTTTGTTCACTACAGTGTGACTGGTATGATATTAAAATTCAATTTGAAATGGTTTAGATTATTCCATCGTTGATATTTTTGACTGGAATGTGATTAGTCTTGGTTGAGACATGGGTATCCAGCAGTTAAATTTAGGCACCCCACATAGGACGCTCATATACCAGCCAAGACTAATCATATTTCACTCAAAAATATCATCAACANGC AAATTCAAACCATTTCAAATTGCAATAATATAACGCGTAAAATTGTTGCATATTTATTATTAATCTTAACANCAGTA                                   ]


>consensus_9590#1 GTCATCGCGCCGGAGACTCGACATTCTGACGGAAAGTTTGGCACATACTGTATTGGAAGA AGATTGCGGCTTGGCGAGCAGAACCACCGCATGGTCGAATGCTTTAAAGGGGGGACGAGT GTGGTGTGGTCTACTTATATCTATATAAGTAGTATATGGTGTTGGTCAGACATAGAATGT ATTTTGCCAGAAGACCGATGTGCAAAGAACTGAAATGAAGCGCAATCGTTTGGAAAATGC ATGAGCAATGAAATTAGAGAAGAAACAGAGAAGATTGAAACAATTGGTTGTTAATTTGCA AATTGACTGTTCATTGTTTGGTTATCAGAATTTACTGAGATAGTCTGTAATTTTTGCTTA AATACATTCGATTGTCCCCAACCAGTGTTTTGTTCACTACAGTGTGACTGGTATGATATT AAAATTCAATTTGAAATGGTTTAGATTATTCCATCGTTGATATTTTTGACTGGAATGTGA TTAGTCTTGGTTGAGACATGGGTATCCAGCAGTTAAATTTAGGCACCCCACATAGGACGC TCATATACCAGCCAAGACTAATCATATTTCACTCANAAATATCATCAACAGCAAAATTCA AACCATTTCANATTGCAATAATATAACGCGTAAAATTGTTGCATATTTATTATTAATCTT AACAACAGTATGANATTTGCTAGTGTTTAATGTACCTCTAGTATG



consensusID : consensus_9590#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 562
fasta sequence
                              [GTAGTGCCGTAAAGCAGGCGAATGAGCGAGAGATCAATCGATCGAGTAAGCGAGTACAGTACAGTGAACAGGATTAAGATGTACATATATATACAAATGGAAATGCATGAATCATCGAATCAATTAAGCGATTAATAGTAAGGCTAGCAGAATGAATACATGCGTAGGCAGTAAGCAGTGCTCAAGCGTACATAATAAAGGTACAATAGTATAGATAGGTTGTTGTTGTTGTACGGATGACTCCGTTAAATAAGTTAACAAAAGGGTTTAGCCAAATTAGATGTAAACAAACTCAATCGTATATGAGCTACTATAATTCTATTATGTTATTTATTTCAAGTATGAGATTTATATAAGAACTTTCGTCTAAATTAGAGCGAATAGTTTCATAGTATTTGGGTGCCAAGTTGATGTAAGACATTAAATAGGAAGAATATGTATTTGTAAAATCTCAGGAAATGAATTTTTAAGTAAATCCAACGTTTCACCTGACAATCTGGTTCAAGCTTTTTCAAGGAAATATGTCCTATTTAATGTATGAGATTGTAGACCATCAACGTTG]

[+] EMBL CD059882             [GTAGTGCCGTAAAGCAGGCGAATGAGCGAGAGATCAATCGATCGAGTAAGCGAGTACAGTACAGTGAACAGGATTAAGATGTACATATATATACAAATGGAAATGCATGAATCATCGAATCAATTAAGCGATTAATAGTAAGGCTAGCAGAATGAATACATGCGTAGGCAGTAAGCAGTGCTCAAGCGTACATAATAAAGGTACAATAGTATAGATAGGTTGTTGTTGTTGTACGGATGACTCCGTTAAATAAGTTAACAAAAGGGTTTAGCCAAATTAGATGTAAACAAACTCAATCGTATATGAGCTACTATAATTCTATTATGTTATTTATTTCAAGTATGAGATTTATATAAGAACTTTCGTCTAAATTAGAGCGAATAGTTTCATAGTATTTGGGTGCCAAGTTGATGTAAGACATTAAATAGGAAGAATATGTATTTGTAAAATCTCAGGAAATGAATTTTTAAGTAAATCCAACGTTTCACCTGACAATCTGGTTCAAGCTTTTTCAAGGAAATATGTCCTATTTAATGTATGAGATTGTAGACCATCAACGTTG]


>consensus_9590#2 GTAGTGCCGTAAAGCAGGCGAATGAGCGAGAGATCAATCGATCGAGTAAGCGAGTACAGT ACAGTGAACAGGATTAAGATGTACATATATATACAAATGGAAATGCATGAATCATCGAAT CAATTAAGCGATTAATAGTAAGGCTAGCAGAATGAATACATGCGTAGGCAGTAAGCAGTG CTCAAGCGTACATAATAAAGGTACAATAGTATAGATAGGTTGTTGTTGTTGTACGGATGA CTCCGTTAAATAAGTTAACAAAAGGGTTTAGCCAAATTAGATGTAAACAAACTCAATCGT ATATGAGCTACTATAATTCTATTATGTTATTTATTTCAAGTATGAGATTTATATAAGAAC TTTCGTCTAAATTAGAGCGAATAGTTTCATAGTATTTGGGTGCCAAGTTGATGTAAGACA TTAAATAGGAAGAATATGTATTTGTAAAATCTCAGGAAATGAATTTTTAAGTAAATCCAA CGTTTCACCTGACAATCTGGTTCAAGCTTTTTCAAGGAAATATGTCCTATTTAATGTATG AGATTGTAGACCATCAACGTTG



consensusID : consensus_9590#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 479
fasta sequence
                              [AGAAACTAGTCTCGAGTTTTGTTCACCACATTTGGTGTCGCTGCCAACCAGGAGGAGGAAGGGTGCTGTTCTGCGGACGCCGCTGCGGGTCTGGAGTTGAGGTGCTAGTTGGGGCAGTCTGGTGTGGAGAGTTGGCGTCGAGCGGAGTGTTCTGGCGGGGCGGCGTTGGCTGTAGCGGGTGCTGTCGACGGAGAGGAGCAGTGGGACGTGCGGCTGCTGGACGGACATCGGATGTAGATGGCTCAGCAGGCCGGTGGAGTACGGGTGTTGAACGTCCCAGGTGCCGGGTGGATGCGGATGTTGGTGCCCCGGCAGGTCGACGGAGCTATGGAGGTCAGCGCGCCGCAGACTCGACATTCTGACAGAGAGTTTGGCACAGACTGCAGTGAAAGAAGATAGTGGCATGGCGAGCAGAACCACCGCATGAACGAATGCTTTAAAGGCGGGACGAGTGTGGTGTGGTCTACTTATATCCATAT]

[+] EMBL BF936229             [AGAAACTAGTCTCGAGTTTTGTTCACCACATTTGGTGTCGCTGCCAACCAGGAGGAGGAAGGGTGCTGTTCTGCGGACGCCGCTGCGGGTCTGGAGTTGAGGTGCTAGTTGGGGCAGTCTGGTGTGGAGAGTTGGCGTCGAGCGGAGTGTTCTGGCGGGGCGGCGTTGGCTGTAGCGGGTGCTGTCGACGGAGAGGAGCAGTGGGACGTGCGGCTGCTGGACGGACATCGGATGTAGATGGCTCAGCAGGCCGGTGGAGTACGGGTGTTGAACGTCCCAGGTGCCGGGTGGATGCGGATGTTGGTGCCCCGGCAGGTCGACGGAGCTATGGAGGTCAGCGCGCCGCAGACTCGACATTCTGACAGAGAGTTTGGCACAGACTGCAGTGAAAGAAGATAGTGGCATGGCGAGCAGAACCACCGCATGAACGAATGCTTTAAAGGCGGGACGAGTGTGGTGTGGTCTACTTATATCCATAT]


>consensus_9590#3 AGAAACTAGTCTCGAGTTTTGTTCACCACATTTGGTGTCGCTGCCAACCAGGAGGAGGAA GGGTGCTGTTCTGCGGACGCCGCTGCGGGTCTGGAGTTGAGGTGCTAGTTGGGGCAGTCT GGTGTGGAGAGTTGGCGTCGAGCGGAGTGTTCTGGCGGGGCGGCGTTGGCTGTAGCGGGT GCTGTCGACGGAGAGGAGCAGTGGGACGTGCGGCTGCTGGACGGACATCGGATGTAGATG GCTCAGCAGGCCGGTGGAGTACGGGTGTTGAACGTCCCAGGTGCCGGGTGGATGCGGATG TTGGTGCCCCGGCAGGTCGACGGAGCTATGGAGGTCAGCGCGCCGCAGACTCGACATTCT GACAGAGAGTTTGGCACAGACTGCAGTGAAAGAAGATAGTGGCATGGCGAGCAGAACCAC CGCATGAACGAATGCTTTAAAGGCGGGACGAGTGTGGTGTGGTCTACTTATATCCATAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9590#0      CAACATTACCACTTACACACCATCTTAATCTCTTCTTAATTCATCACGACTCATTTATTA 60
consensus_9590#1      ------------------------------------------------------------
consensus_9590#3      ------------------------------------------------------------
consensus_9590#2      ------------------------------------------------------------
                                                                                  

consensus_9590#0      TAAAACTCTAGCCACATTACGTCCTCTCAATCCTATCACATACACTTGCACACATTACAG 120
consensus_9590#1      ------------------------------------------------------------
consensus_9590#3      ------------------------------------------------------------
consensus_9590#2      ------------------------------------------------------------
                                                                                  

consensus_9590#0      TCATGAAAATATGTGGAGAGCAGGACAGCACGTTGAAAATACTCAAGTGTCTGGATGAGA 180
consensus_9590#1      ------------------------------------------------------------
consensus_9590#3      ------------------------------------------------------------
consensus_9590#2      ------------------------------------------------------------
                                                                                  

consensus_9590#0      GTCGCTTACATTTGAACAACAACATTGCCTGTGTGTTTACATAAATCAACAGATAAATAA 240
consensus_9590#1      ------------------------------------------------------------
consensus_9590#3      ------------------------------------------------------------
consensus_9590#2      ------------------------------------------------------------
                                                                                  

consensus_9590#0      ACGTAAAATACCCTCTCTTCAATAAGTCATCGTTTCGACTTACTACAATTACAAATTATC 300
consensus_9590#1      ------------------------------------------------------GTCATC 6
consensus_9590#3      ------------------------------------------------------------
consensus_9590#2      ---------------------------------------------------------GTA 3
                                                                                  

consensus_9590#0      AACCATATGACTCAAACACATAGCC-AGCTTTTAATCCA--TACTATATGACATTATGAT 357
consensus_9590#1      GCGCCGGAGACTCGACATTCTGACGGAAAGTTTGGCACA--TACTGTATTGGAAGAAGAT 64
consensus_9590#3      AGAAACTAGTCTCGAGTTTTGTTCACCACATTTGGTGTCGCTGCCAACCAGGAGGAGGAA 60
consensus_9590#2      GTGCCGTAAAGCAGGCGAATGAGCG-AGAGATCAATCGATCGAGTAAGCGAGTACAGTAC 62
                                             *       *                       *  * 

consensus_9590#0      CGTTACCAATACCATTAAAGTTAACAGGCACAAAGACGAAGTCAAAGATAAATCAGAAAA 417
consensus_9590#1      TGCGGCTTG----------GCGAGCAGA-ACCACCGCATGGTCGAA--TGCTTTAAAGGG 111
consensus_9590#3      GGGTGCTGT-----------TCTGCGGACGCCGCTGCGGGTCTGGAGTTGAGGTGCTAGT 109
consensus_9590#2      AGTGAACAGGA---TTAAGATGTACATATATATACAAATGGAAATGCATGAATCATCGAA 119
                       *                      *                       *           

consensus_9590#0      ACCATTTGATTACTTATACTGTGGTGTGGTCTACTTATATCCATATAAGTAGTATA-TGG 476
consensus_9590#1      GGGACG-----------AGTGTGGTGTGGTCTACTTATATCTATATAAGTAGTATA-TGG 159
consensus_9590#3      TGGGGC-----------AGTCTGGTGTGGAGAGTTGGCGTCGAGCGGAGTGTTCTGGCGG 158
consensus_9590#2      TCAATTAAGCGATTAATAGTAAGGCTAGCAGAATGAATACATGCGTAGGCAGTAAG-CAG 178
                                       * *  **   *                    *   *      *

consensus_9590#0      TGTGG-GTCAGACATAGAATGTATT-TCGGCAGAAGACCGATGAGGAAAGAACTGAAATG 534
consensus_9590#1      TGTTG-GTCAGACATAGAATGTATT-TTGCCAGAAGACCGATGTGCAAAGAACTGAAATG 217
consensus_9590#3      GGCGGCGTTGGCTGTAGCGGGTGCTGTCGACGGAGAGGAGCAGTGGGACGTGCGGCTGCT 218
consensus_9590#2      TGC----TCAAGCGTACATAATAAAGGTACAATAGTATAGATAGGT----TGTTGTTGTT 230
                       *     *      **     *           *     *    *         *     

consensus_9590#0      AAACGCAAACGTCTGGAAAATGCATGAGCAATGAAATAAGAGAAGAAACAGTGAAGATTG 594
consensus_9590#1      AAGCGCAATCGTTTGGAAAATGCATGAGCAATGAAATTAGAGAAGAAACAGAGAAGATTG 277
consensus_9590#3      GGACGGACATCGGATGTAGATGGCTCAGCAG-GCCGGTGGAGTACGGGTGTTGAACGTCC 277
consensus_9590#2      GTACGGATGACTCCGTTAAATAAGTTAACAAAAGGGTTTAGCCAAATTAGATGTAAACAA 290
                         ** *          * **   * * **             *        * *     

consensus_9590#0      AAACAATTGGTTGTTAATTTGCAAATTGACTGTTCATTGTTTGGTAATCAGAATTTATTG 654
consensus_9590#1      AAACAATTGGTTGTTAATTTGCAAATTGACTGTTCATTGTTTGGTTATCAGAATTTACTG 337
consensus_9590#3      CAGGTGCCGGGTG--GATGCGGATGTTG---GTGCCCCGGCAGGTCGACGGAGCT-ATGG 331
consensus_9590#2      ACTCAATCGTATATGAGCTACTATAATTCTATTATGTTATTTATTTCAAGTATGAGATTT 350
                              *  *          *   *     *           *      *    *   

consensus_9590#0      AGATAGTCTGTAATCTTTGCTTAAATACATTCGATTGTCCCCAACTAGTGTTTTGTTCAC 714
consensus_9590#1      AGATAGTCTGTAATTTTTGCTTAAATACATTCGATTGTCCCCAACCAGTGTTTTGTTCAC 397
consensus_9590#3      AG---GTCAGCG-----CGCC---GCAGACTCGAC-ATTCTGACAGAGAGTTTGGCACAG 379
consensus_9590#2      ATA----TAAGAACTTTCGTCTAAATTAGAGCGAATAGTTTCA--TAGTATTTGGGTGCC 404
                      *                 *            ***        *   **  *** *     

consensus_9590#0      TACATT-----TGGTGTCGCTGCCAACCAGGAGGAGGAAGGGT----GCTGTTCTGCGGA 765
consensus_9590#1      TACAGTGTGACTGGTATGATATTAAAATTCAATTTGAAATGGTTTAGATTATTCCATCGT 457
consensus_9590#3      -ACTGC------AGTGAAAGAAGATAGTGGCATGGCGAGCAGA----ACCACCGCATGAA 428
consensus_9590#2      AAGTTGA-----TGTAAGACATTAAATAGGAAGAATATGTATTTGTAAAATCTCAGGAAA 459
                       *           **          *     *                            

consensus_9590#0      CGC-CGCTGCGGGT-CTGGAGTTG--CGGTGCTAGTTGGGCCAGTCTGGTGTGGAGA--- 818
consensus_9590#1      TGA-TATTTTTGAC-TGGAATGTGATTAGTCTTGGTTGAGACA--TGGGTATCCAGCAGT 513
consensus_9590#3      CGAATGCTTTAAAGGCGGGACGAGTGTGGTG-TGGTCTACTTATATCCATAT-------- 479
consensus_9590#2      TGA--ATTTTTAAG-TAAATCCAACGTTTCACCTGACAATCTGGTTCAAGCTTTTTCAAG 516
                       *     *                          *                *        

consensus_9590#0      ------------------------------------------------------------
consensus_9590#1      TAAATTTAGGCACCCCACATAGGACGCTCATATACCAGCCAAGACTAATCATATTTCACT 573
consensus_9590#3      ------------------------------------------------------------
consensus_9590#2      GAAATATGTCCTATTTAATGTATGAGATTGTAGACCATCAACGTTG-------------- 562
                                                                                  

consensus_9590#0      ------------------------------------------------------------
consensus_9590#1      CANAAATATCATCAACAGCAAAATTCAAACCATTTCANATTGCAATAATATAACGCGTAA 633
consensus_9590#3      ------------------------------------------------------------
consensus_9590#2      ------------------------------------------------------------
                                                                                  

consensus_9590#0      ------------------------------------------------------------
consensus_9590#1      AATTGTTGCATATTTATTATTAATCTTAACAACAGTATGANATTTGCTAGTGTTTAATGT 693
consensus_9590#3      ------------------------------------------------------------
consensus_9590#2      ------------------------------------------------------------
                                                                                  

consensus_9590#0      ------------
consensus_9590#1      ACCTCTAGTATG 705
consensus_9590#3      ------------
consensus_9590#2      ------------
                                  




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)