These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9650#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 846 fasta sequence [CTGACAGTTGTTAAATCCCAAGTGATACAGTACACTAGTAAGTATAGAACTTGAGTAATATGGTTGGTATAAGGATAATGGAATGGAAAAACAAAAGTAGGATAACAGCAAAGTAGGCACTTTTAGAAATCACAGGGGATATGTACACTTTGTATGTATGGCGATCTTATTGTTTCACCGTCTTGCGCCCCTTCTTTGAGGATCGAACCTCGTGCCAATCGCCATCAGATTCGAAAACGGCTGACTTGTACGTCGGAATTTGTGGGACAGGTGGCAGTTTTTTTGATGCCTTCAGAGGAACAGGTTCCACACCGCTTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACC-TTTCGACGTGATGACCTCTGAGATAATTGTT-TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCAACAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATTTTATAAAAGATATCTGAACATCCGTAAAATACGAATATAACTCAGCAACCATACTGTTCACACCGT] [+] EMBL CD132632 [CTGACAGTTGTTAAATCCCAAGTGATACAGTACACTAGTAAGTATAGAACTTGAGTAATATGGTTGGTATAAGGATAATGGAATGGAAAAACAAAAGTAGGATAACAGCAAAGTAGGCACTTTTAGAAATCACAGGGGATATGTACACTTTGTATGTATGGCGATCTTATTGTTTCACCGTCTTGCGCCCCTTCTTTGAGGATCGAACCTCGTGCCAATCGCCATCAGATTCGAAAACGGCTGACTTGTACGTCGGAATTTGTGGGACAGGTGGCAGTTTTTTTGATGCCTTCAGAGGAACAGGTTCAACACCGC TTCTGTACTCGCAAACAGATGGTTTTCACCNATTTCACC TTTCGACGTGATGACC ] [+] EMBL CD114135 [ TGGAATGGAAAAACAAAAGTAGGATAACAGCAAAGTAGGCACTTTTAGAGATCACAGGGGATATGTACACTTTGTATGTATGGTGATCTTATTGTTTCACCGTCTTGCGCCCCTTCTTTGAGGATCGAACCTCGTGCCAATCGCCATCAGATTCGAAAACGGCTGACTTGTACGTCGGAATTTGTGGGACAGGTGGCAGTTTTTTTGATGCCTTCAGAGGAACAGGTTCCACACCGCTTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCT ] [-] EMBL AI976171 [ CTTTGAGGATCGAACCTCGTGCCAATCGCCATCAGATTCGAAAACGGCTGACTTGTACGTCGGAATTTGTGGGACAGGTGGCAGTTTTTTTGATGCCTTCAGAGGAACAGGTTCCACACCGCTTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTA ] [-] EMBL CD185346 [ ctTCGTGCCAATCGCCATCAGATTCGAAAACGGCTGACTTGTACGTCGGAATTTGTGGGACAGGTGGCAGTTTNTTTGATGCCTTCAGAGGAACAGGTTCCACACCGCTTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCAACAAGTAGAAAGAT ] [+] EMBL CD131940 [ CAGTTTTTTTGATGCCTTCAGAGGAACAGGTTCCACACCGCCTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTAGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTT ] [-] EMBL AI975031 [ ACACCGCTTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCAACAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATTTTATAAAAGATATCTGAACATCCGTAAAATACGAATATAAC ] [-] EMBL AI975409 [ CGCAACCAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCAACAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATTTTATAAAAGATATCTGAACATCCGTAAAATACGAATATAACTCAGCAACCATACTGTTCACACCGT] [-] EMBL CD070957 [ CAGATGGTTTTCCCCATTTTCACCTTTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATA TTTGGACGCTGATCTG GGTC TTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCACCAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATTTTATAAAAGATATCTGAACATCCGTAAAATACGAATATAACTCAGCAACCATACTGTTCACAC ] [-] EMBL CD070961 [ CAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACTTCTGAGATAA TGTTNTTAGTGTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCAACAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATTTTATAAAAGATATCTGAACATCCGTAAAATACGAATATAACTCAGCAACCATACTGTTCACAC ] [-] EMBL CD070968 [ TAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCAACAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATTTTATAAAAGATATCTGAACATCCGTAAAATACGAATATAACTCAGCAACCATACTGTTCACAC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||