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Schistosoma mansoni
cluster # 9650 cluster # 9650       Sequences # 10       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9650#0 length = 846 sequences # 10  

consensusID : consensus_9650#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 846
fasta sequence
                              [CTGACAGTTGTTAAATCCCAAGTGATACAGTACACTAGTAAGTATAGAACTTGAGTAATATGGTTGGTATAAGGATAATGGAATGGAAAAACAAAAGTAGGATAACAGCAAAGTAGGCACTTTTAGAAATCACAGGGGATATGTACACTTTGTATGTATGGCGATCTTATTGTTTCACCGTCTTGCGCCCCTTCTTTGAGGATCGAACCTCGTGCCAATCGCCATCAGATTCGAAAACGGCTGACTTGTACGTCGGAATTTGTGGGACAGGTGGCAGTTTTTTTGATGCCTTCAGAGGAACAGGTTCCACACCGCTTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACC-TTTCGACGTGATGACCTCTGAGATAATTGTT-TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCAACAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATTTTATAAAAGATATCTGAACATCCGTAAAATACGAATATAACTCAGCAACCATACTGTTCACACCGT]

[+] EMBL CD132632             [CTGACAGTTGTTAAATCCCAAGTGATACAGTACACTAGTAAGTATAGAACTTGAGTAATATGGTTGGTATAAGGATAATGGAATGGAAAAACAAAAGTAGGATAACAGCAAAGTAGGCACTTTTAGAAATCACAGGGGATATGTACACTTTGTATGTATGGCGATCTTATTGTTTCACCGTCTTGCGCCCCTTCTTTGAGGATCGAACCTCGTGCCAATCGCCATCAGATTCGAAAACGGCTGACTTGTACGTCGGAATTTGTGGGACAGGTGGCAGTTTTTTTGATGCCTTCAGAGGAACAGGTTCAACACCGC TTCTGTACTCGCAAACAGATGGTTTTCACCNATTTCACC TTTCGACGTGATGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD114135             [                                                                              TGGAATGGAAAAACAAAAGTAGGATAACAGCAAAGTAGGCACTTTTAGAGATCACAGGGGATATGTACACTTTGTATGTATGGTGATCTTATTGTTTCACCGTCTTGCGCCCCTTCTTTGAGGATCGAACCTCGTGCCAATCGCCATCAGATTCGAAAACGGCTGACTTGTACGTCGGAATTTGTGGGACAGGTGGCAGTTTTTTTGATGCCTTCAGAGGAACAGGTTCCACACCGCTTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCT                                                                                                                                                                                                              ]
[-] EMBL AI976171             [                                                                                                                                                                                                 CTTTGAGGATCGAACCTCGTGCCAATCGCCATCAGATTCGAAAACGGCTGACTTGTACGTCGGAATTTGTGGGACAGGTGGCAGTTTTTTTGATGCCTTCAGAGGAACAGGTTCCACACCGCTTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTA                                                                                                                                                                                                             ]
[-] EMBL CD185346             [                                                                                                                                                                                                               ctTCGTGCCAATCGCCATCAGATTCGAAAACGGCTGACTTGTACGTCGGAATTTGTGGGACAGGTGGCAGTTTNTTTGATGCCTTCAGAGGAACAGGTTCCACACCGCTTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCAACAAGTAGAAAGAT                                                                                                    ]
[+] EMBL CD131940             [                                                                                                                                                                                                                                                                                  CAGTTTTTTTGATGCCTTCAGAGGAACAGGTTCCACACCGCCTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTAGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTT                                                                                                                                                                                         ]
[-] EMBL AI975031             [                                                                                                                                                                                                                                                                                                                    ACACCGCTTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCAACAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATTTTATAAAAGATATCTGAACATCCGTAAAATACGAATATAAC                         ]
[-] EMBL AI975409             [                                                                                                                                                                                                                                                                                                                                     CGCAACCAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCAACAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATTTTATAAAAGATATCTGAACATCCGTAAAATACGAATATAACTCAGCAACCATACTGTTCACACCGT]
[-] EMBL CD070957             [                                                                                                                                                                                                                                                                                                                                           CAGATGGTTTTCCCCATTTTCACCTTTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATA TTTGGACGCTGATCTG GGTC TTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCACCAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATTTTATAAAAGATATCTGAACATCCGTAAAATACGAATATAACTCAGCAACCATACTGTTCACAC   ]
[-] EMBL CD070961             [                                                                                                                                                                                                                                                                                                                                           CAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACTTCTGAGATAA TGTTNTTAGTGTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCAACAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATTTTATAAAAGATATCTGAACATCCGTAAAATACGAATATAACTCAGCAACCATACTGTTCACAC   ]
[-] EMBL CD070968             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCAACAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATTTTATAAAAGATATCTGAACATCCGTAAAATACGAATATAACTCAGCAACCATACTGTTCACAC   ]


>consensus_9650#0 CTGACAGTTGTTAAATCCCAAGTGATACAGTACACTAGTAAGTATAGAACTTGAGTAATA TGGTTGGTATAAGGATAATGGAATGGAAAAACAAAAGTAGGATAACAGCAAAGTAGGCAC TTTTAGAAATCACAGGGGATATGTACACTTTGTATGTATGGCGATCTTATTGTTTCACCG TCTTGCGCCCCTTCTTTGAGGATCGAACCTCGTGCCAATCGCCATCAGATTCGAAAACGG CTGACTTGTACGTCGGAATTTGTGGGACAGGTGGCAGTTTTTTTGATGCCTTCAGAGGAA CAGGTTCCACACCGCTTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACCTTTCG ACGTGATGACCTCTGAGATAATTGTTTTAGTTTCTTTAATAGCTTCCTTATATTTTGGAC GCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGT TTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGA CAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATT TTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCT TGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGA GGCTTTTTCGCAACAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATT TTATAAAAGATATCTGAACATCCGTAAAATACGAATATAACTCAGCAACCATACTGTTCA CACCGT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)