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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9650#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 846 fasta sequence
[CTGACAGTTGTTAAATCCCAAGTGATACAGTACACTAGTAAGTATAGAACTTGAGTAATATGGTTGGTATAAGGATAATGGAATGGAAAAACAAAAGTAGGATAACAGCAAAGTAGGCACTTTTAGAAATCACAGGGGATATGTACACTTTGTATGTATGGCGATCTTATTGTTTCACCGTCTTGCGCCCCTTCTTTGAGGATCGAACCTCGTGCCAATCGCCATCAGATTCGAAAACGGCTGACTTGTACGTCGGAATTTGTGGGACAGGTGGCAGTTTTTTTGATGCCTTCAGAGGAACAGGTTCCACACCGCTTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACC-TTTCGACGTGATGACCTCTGAGATAATTGTT-TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCAACAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATTTTATAAAAGATATCTGAACATCCGTAAAATACGAATATAACTCAGCAACCATACTGTTCACACCGT]
[+] EMBL CD132632 [CTGACAGTTGTTAAATCCCAAGTGATACAGTACACTAGTAAGTATAGAACTTGAGTAATATGGTTGGTATAAGGATAATGGAATGGAAAAACAAAAGTAGGATAACAGCAAAGTAGGCACTTTTAGAAATCACAGGGGATATGTACACTTTGTATGTATGGCGATCTTATTGTTTCACCGTCTTGCGCCCCTTCTTTGAGGATCGAACCTCGTGCCAATCGCCATCAGATTCGAAAACGGCTGACTTGTACGTCGGAATTTGTGGGACAGGTGGCAGTTTTTTTGATGCCTTCAGAGGAACAGGTTCAACACCGC TTCTGTACTCGCAAACAGATGGTTTTCACCNATTTCACC TTTCGACGTGATGACC ]
[+] EMBL CD114135 [ TGGAATGGAAAAACAAAAGTAGGATAACAGCAAAGTAGGCACTTTTAGAGATCACAGGGGATATGTACACTTTGTATGTATGGTGATCTTATTGTTTCACCGTCTTGCGCCCCTTCTTTGAGGATCGAACCTCGTGCCAATCGCCATCAGATTCGAAAACGGCTGACTTGTACGTCGGAATTTGTGGGACAGGTGGCAGTTTTTTTGATGCCTTCAGAGGAACAGGTTCCACACCGCTTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCT ]
[-] EMBL AI976171 [ CTTTGAGGATCGAACCTCGTGCCAATCGCCATCAGATTCGAAAACGGCTGACTTGTACGTCGGAATTTGTGGGACAGGTGGCAGTTTTTTTGATGCCTTCAGAGGAACAGGTTCCACACCGCTTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTA ]
[-] EMBL CD185346 [ ctTCGTGCCAATCGCCATCAGATTCGAAAACGGCTGACTTGTACGTCGGAATTTGTGGGACAGGTGGCAGTTTNTTTGATGCCTTCAGAGGAACAGGTTCCACACCGCTTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCAACAAGTAGAAAGAT ]
[+] EMBL CD131940 [ CAGTTTTTTTGATGCCTTCAGAGGAACAGGTTCCACACCGCCTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTAGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTT ]
[-] EMBL AI975031 [ ACACCGCTTTCTGTACTCGCAACCAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCAACAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATTTTATAAAAGATATCTGAACATCCGTAAAATACGAATATAAC ]
[-] EMBL AI975409 [ CGCAACCAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCAACAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATTTTATAAAAGATATCTGAACATCCGTAAAATACGAATATAACTCAGCAACCATACTGTTCACACCGT]
[-] EMBL CD070957 [ CAGATGGTTTTCCCCATTTTCACCTTTTCGACGTGATGACCTCTGAGATAATTGTT TTAGTTTCTTTAATAGCTTCCTTATA TTTGGACGCTGATCTG GGTC TTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCACCAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATTTTATAAAAGATATCTGAACATCCGTAAAATACGAATATAACTCAGCAACCATACTGTTCACAC ]
[-] EMBL CD070961 [ CAGATGGTTTTCACCATTTTCACC TTTCGACGTGATGACTTCTGAGATAA TGTTNTTAGTGTCTTTAATAGCTTCCTTATATTTTGGACGCTGATCTGTGGTCTTTTTTCCTTTTTTAATAGTAACCCAATTATCGCCTTTGTCATCGTTTTCAGGATCATCTTTAGCAAGATTTTGAAACATTGGTGACACTTCAACGGTTGTAGCGACAGGAATACGTGATTTTTGAGTATTCATAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCAACAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATTTTATAAAAGATATCTGAACATCCGTAAAATACGAATATAACTCAGCAACCATACTGTTCACAC ]
[-] EMBL CD070968 [ TAATAGTTGTGTTACGTGGCGGGACCACAGATTTTTTTATTTCTGCGTGATCACCATCCGATGACGATGTCCTACCATCAGAAGATTTACTCTTGCTTTTCTTGACGCGTGTCTTAGACTTCTTCGTGTTGACGGTGACAGGCTCTTTCCCGAGGCTTTTTCGCAACAAGTAGAAAGATGTAGATGTCACCAGGAGAGCAGTTATAGCATATTTTATAAAAGATATCTGAACATCCGTAAAATACGAATATAACTCAGCAACCATACTGTTCACAC ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||