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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9657#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 800 fasta sequence
[ATCTCGTACAATGCTTCAG-AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCATTGTCCTGATCTCCTATACGCTCATGCTTGTATTACTTTACCACTGATTTTCTTAAGCAAACAGGTTGAAAGCGAGGTTGAAAACTTAGTTCCTTCCAGAACAAGTAGTGCTATTTTTCACTCGAAAAATCGTAATATTGATATCAATTCTCTTTCTGCTTCTCATCGCGAAACAAATACAAGTATTTCTCCATATATTAAAGCACGCATGTCAACGAAATTGAATCCCAGTGATCTAGAGATTTACCAACAGTTGTGGCGGGAGTGTCGGGATGAGTTAATTTCTCGCATTCCCTCGGATCCATGTTCACCTCAATCTGTTTAGTTTTGGCCTAATGCAGTAACATGAGTTTGNNTGG]
[+] EMBL CD089651 [ATCTCGTACAATGCTTCAGAAGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCATTGTCCTGATC ]
[+] EMBL CD089792 [ TCTCGTACAATGCTTCAG AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCATTGTCCTGATCTCC ]
[+] EMBL CD089765 [ TCTCGTACAATGCTTCAG AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAATATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCA ]
[+] EMBL CD089764 [ TCTCGTACAATGCTTCAG AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCA ]
[+] EMBL CD089776 [ TCTCGTACAATGCTTCAG AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCA ]
[-] EMBL CD089803 [ CTCGTACAATGCTTCAG AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCAT ]
[-] EMBL CD089845 [ CTCGTACAATGCTTCAG AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCAT ]
[-] EMBL CD183616 [ CATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACATTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCATTGTCCTGATCTCCTATACGCTCATGCTTGTATTACTTTACCACTGATTTTCTTAAGCAAACAGGTTGAAAGCGAGGTTGAAAACT ]
[+] EMBL CD068315 [ TGGTGTCCTATGTGACAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCATTGTCCTGATCTCCTATACGCTCATGCTTGTATTACTTTACCACTGATTTTCTTAAGCAAACAGGTTGAAAGCGAGGTTGAAAATTTAGTTCCTTCCAGAACAAGTAGTGCTATTTTTCACTCGAAAAATCGTAATATTGATATCAATTCTCTTTCTGCTTCTCATCGCGAAACAAATACAAGTATTTCTCCATATATTAAAGCACGCATGTCAACGAAATTGAATCCCAGTGATCTAGAGATTTACCAACAGTTGTGGCGGGAGTGTCGGGATGAGTTAATTTCTCGCATTCCCTCGGATCCATGTTCACCTCAATCTGTTTAGT ]
[-] EMBL CD062706 [ ATTTCTCCATATATTAAAGAAAGCATGTCAACGAAATTGAATCCCAGTGATCTAGAGATTTACCAACAGTTGTGGCGGGAGTGTTGGGATGAGTTAATTTCTCGCATTCCCTCGGCTCCATGTTCACCTCAATCTGTTTTGTTTTGGCCTAATGCAGTAACATGAGTTTGNNTGG]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||