These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9657#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 800 fasta sequence [ATCTCGTACAATGCTTCAG-AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCATTGTCCTGATCTCCTATACGCTCATGCTTGTATTACTTTACCACTGATTTTCTTAAGCAAACAGGTTGAAAGCGAGGTTGAAAACTTAGTTCCTTCCAGAACAAGTAGTGCTATTTTTCACTCGAAAAATCGTAATATTGATATCAATTCTCTTTCTGCTTCTCATCGCGAAACAAATACAAGTATTTCTCCATATATTAAAGCACGCATGTCAACGAAATTGAATCCCAGTGATCTAGAGATTTACCAACAGTTGTGGCGGGAGTGTCGGGATGAGTTAATTTCTCGCATTCCCTCGGATCCATGTTCACCTCAATCTGTTTAGTTTTGGCCTAATGCAGTAACATGAGTTTGNNTGG] [+] EMBL CD089651 [ATCTCGTACAATGCTTCAGAAGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCATTGTCCTGATC ] [+] EMBL CD089792 [ TCTCGTACAATGCTTCAG AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCATTGTCCTGATCTCC ] [+] EMBL CD089765 [ TCTCGTACAATGCTTCAG AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAATATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCA ] [+] EMBL CD089764 [ TCTCGTACAATGCTTCAG AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCA ] [+] EMBL CD089776 [ TCTCGTACAATGCTTCAG AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCA ] [-] EMBL CD089803 [ CTCGTACAATGCTTCAG AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCAT ] [-] EMBL CD089845 [ CTCGTACAATGCTTCAG AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCAT ] [-] EMBL CD183616 [ CATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACATTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCATTGTCCTGATCTCCTATACGCTCATGCTTGTATTACTTTACCACTGATTTTCTTAAGCAAACAGGTTGAAAGCGAGGTTGAAAACT ] [+] EMBL CD068315 [ TGGTGTCCTATGTGACAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCATTGTCCTGATCTCCTATACGCTCATGCTTGTATTACTTTACCACTGATTTTCTTAAGCAAACAGGTTGAAAGCGAGGTTGAAAATTTAGTTCCTTCCAGAACAAGTAGTGCTATTTTTCACTCGAAAAATCGTAATATTGATATCAATTCTCTTTCTGCTTCTCATCGCGAAACAAATACAAGTATTTCTCCATATATTAAAGCACGCATGTCAACGAAATTGAATCCCAGTGATCTAGAGATTTACCAACAGTTGTGGCGGGAGTGTCGGGATGAGTTAATTTCTCGCATTCCCTCGGATCCATGTTCACCTCAATCTGTTTAGT ] [-] EMBL CD062706 [ ATTTCTCCATATATTAAAGAAAGCATGTCAACGAAATTGAATCCCAGTGATCTAGAGATTTACCAACAGTTGTGGCGGGAGTGTTGGGATGAGTTAATTTCTCGCATTCCCTCGGCTCCATGTTCACCTCAATCTGTTTTGTTTTGGCCTAATGCAGTAACATGAGTTTGNNTGG] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||