cluster # 9679

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Schistosoma mansoni
cluster # 9679 cluster # 9679 Sequences # 10 consensus # 7

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9679#0 length = 524 sequences # 4
consensus_9679#1 length = 470 sequences # 1
consensus_9679#2 length = 400 sequences # 1

consensus_9679#3 length = 395 sequences # 1
consensus_9679#4 length = 387 sequences # 1
consensus_9679#5 length = 376 sequences # 1
consensus_9679#6 length = 348 sequences # 1

consensusID : consensus_9679#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 524
fasta sequence

                              [AATCTC-AACGCT-AAAGAAACATTTCCTTAGCATCCAGTAGCCATACTGAATCCGGAAGCGTGCTCTAAA-TATTAGTATAAACAA-ATTAGATTTTCCTCTCAAACATGAAGCAGGGGGCCGGGCGCGGTGGTTCACG-CCTGTAATCCCAG-CACTTTGGAAGGCCGAG-AGGGGCGGATCACGAGGTCAAGAGATTGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCAGGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGATCCGAGATGGTGCCACTGCATCCCAGCCTGGGAGACAGAGCGAGACTCCGTCTCAAAACAAACAAACAAAGAAACAAACAAACAAACCAAAAAACCCATGAAGCAGGGGTATGTTATTAATTTAAGGGAATATACTTATCAAAAAGGGAATGTATCTATGAAAATATACAATGTATCAGGCA]

[+] EMBL CD068548             [AATCTC AACGCT AAAGAAACATTTCCTTAGCATCCAGTAGCCATACTGAATCCGGAAGCGTGCTCTAAA TATTAGTATAAACAA ATTAGATTTTCCTCTCAAACATGAAGCAGGGGGCCGGGCGCGGTGGTTCACG CCTGTAATCCCAG CACTTTGGAAGGCCGAG AGGGGCGGATCACGAGGTCAAGAGATTGAGTCCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCAGGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGATCCGAGATGGTGCCACTGCATCCCAGCCTGGGAGACAGAGCGAGACTCCGTCTCAAAACAAACAAACAAAGAAACAAACAAACAAACCAAAAAACCCATGAAGCAGGGGTATGTTATTAATTTAAGGGAATATACTTATCAAAAAGGGAATGTATCTATGAAAATATACAATGTATCAGGCA]
[+] EMBL CD068561             [AATCTC AACGCT AAAGAAACATTTCCTTAGCAT CAGTAGCCATACTGAATCCGGAAGCGTGCTCTAAAGTATTAGTATAAACAAGATTAGATTTTCCTCTCAAACATGAAGCAGGGGGCCGGGCGCGGTGGTTCACG CCTGTAATCCCAG CACTTTGGAAGGCCGAG AGGGGCGGATCACGAGGTCAAGAGATTGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCAGGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGATCCGAGATGGTGCCACTGCATCCCAGCCTGGGAGACAGAGCGAGACTCCGTCTCAAAACAAACAAACAAAGAAACAAACAAACAAACCAAAAAACCCATGAAGCAGGGGTATGTTATTAATTTAAGGGAATATACTTATCAAAAAGG                                   ]
[+] EMBL CD068570             [ ATCTC AA ACTGTAAGAAACATTTCCTTAGCAT CAGTAGCCATACTGAATCCGGAAGCGTGCTCTAAA TATTAGTATAAACAA ATTAGATTTTCCTCTCAAACATGAAGCAGGGGGCCGGGCGCGGTGGTTCACG CCTGTAATCCCAG TACTTTGGAAGGCCGAG AGGGGCGGATCACGAGGTCAAGAGATTGAGACCATCCTGGCTAACACAGTGAAACCCCGACTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCAGGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGATCCGAGATGGTGCCACTGCATCCCAGCCTGGGAGACAGAGCGAGACTCCGTCTCAAAACAAACAAACAAAGAAACAAACAAACAAAGCAAAAAAGCCATGAAGCTGGGGTATGTTATTACTTTAAGGGAATATACTTATCAAAAAGGGAATGT                             ]
[+] EMBL CD068560             [  TCTCAAACG T CAAGAAACATTTCCTTAGCATCCAGTAGCCATACTGAATCCGGAAGCGTGCTCTAAA TATTAGTATAAACAA ATTAGATTTCCCTCTCAAACATGAAGCAGGGGGCCGGGCGCGGTGGTTCACGCCCTGTAATCCCAGCCACTTTGGAAGGCCGAGCAGGGGCGGATCACGAGGTCAAGAGATTGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCAGGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGATCCGAGATGGTGCCACTGCATCCCAGCCTGGGAGACAGAGCGAGACTCCGTCTCAAAACAAACAAACAAAGAAACAAACAAACAAACCAc                                                                                            ]




>consensus_9679#0
AATCTCAACGCTAAAGAAACATTTCCTTAGCATCCAGTAGCCATACTGAATCCGGAAGCG
TGCTCTAAATATTAGTATAAACAAATTAGATTTTCCTCTCAAACATGAAGCAGGGGGCCG
GGCGCGGTGGTTCACGCCTGTAATCCCAGCACTTTGGAAGGCCGAGAGGGGCGGATCACG
AGGTCAAGAGATTGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAATA
CAAAAAATTAGCCGGGCGTGGTGGCAGGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAG
GCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGATCCGAGATGGTGCCACTG
CATCCCAGCCTGGGAGACAGAGCGAGACTCCGTCTCAAAACAAACAAACAAAGAAACAAA
CAAACAAACCAAAAAACCCATGAAGCAGGGGTATGTTATTAATTTAAGGGAATATACTTA
TCAAAAAGGGAATGTATCTATGAAAATATACAATGTATCAGGCA

consensusID : consensus_9679#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 470
fasta sequence

                              [ACTAAATGGGGCCCTTCTTTGTACGCCCTCCTCTCCCTTAAACACATACATAATGTCCTACCAGTGACTTAGAGGCTGGAAAGAGATAGCATACCATAGTATAAAAACTGGGCAGCAGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCCCAAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANCTGGGCAGCAAGCAGGGATCAAGACACCAACCCTGTGCTTA]

[-] EMBL CD085578             [ACTAAATGGGGCCCTTCTTTGTACGCCCTCCTCTCCCTTAAACACATACATAATGTCCTACCAGTGACTTAGAGGCTGGAAAGAGATAGCATACCATAGTATAAAAACTGGGCAGCAGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCCCAAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANCTGGGCAGCAAGCAGGGATCAAGACACCAACCCTGTGCTTA]




>consensus_9679#1
ACTAAATGGGGCCCTTCTTTGTACGCCCTCCTCTCCCTTAAACACATACATAATGTCCTA
CCAGTGACTTAGAGGCTGGAAAGAGATAGCATACCATAGTATAAAAACTGGGCAGCAGGC
CGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCC
CAAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAA
TACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTG
AGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCAC
TGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAANCTGGGCAGCAAGCAGGGATCAAGACACCAACCCTGTGCTTA

consensusID : consensus_9679#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 400
fasta sequence

                              [GTGGATCACTGAGGTCAGGAGTTCGAGACCACAACCTGGTGAAACCCTGTCTCTAGTAAAAATAAAAAAAAAATTAGCTGGGCGTGGTGGCGGGCACCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAAGAGAACGGCGTGAACCCGGGAGGTGGGGCTAGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGATTCTGTCTCAAAAAAAAAAAAACCAAAAAACAAAAACTTAGCCGGCAGTTAACGTGCGTAAAGAAGGTTACTTCCAGATTATTCCCATCCATCGGTGGATTCTCTCCCATATGCAGTTTAATACCCGGGTGTGGAAATGGGCATATTGGGGCAATGTTAACCGATTTCGGTGCTATGATTCAGGTCT]

[+] EMBL CD068616             [GTGGATCACTGAGGTCAGGAGTTCGAGACCACAACCTGGTGAAACCCTGTCTCTAGTAAAAATAAAAAAAAAATTAGCTGGGCGTGGTGGCGGGCACCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAAGAGAACGGCGTGAACCCGGGAGGTGGGGCTAGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGATTCTGTCTCAAAAAAAAAAAAACCAAAAAACAAAAACTTAGCCGGCAGTTAACGTGCGTAAAGAAGGTTACTTCCAGATTATTCCCATCCATCGGTGGATTCTCTCCCATATGCAGTTTAATACCCGGGTGTGGAAATGGGCATATTGGGGCAATGTTAACCGATTTCGGTGCTATGATTCAGGTCT]




>consensus_9679#2
GTGGATCACTGAGGTCAGGAGTTCGAGACCACAACCTGGTGAAACCCTGTCTCTAGTAAA
AATAAAAAAAAAATTAGCTGGGCGTGGTGGCGGGCACCTGTAGTCCTAGCTACTTGGGAG
GCTGAGGCAAGAGAACGGCGTGAACCCGGGAGGTGGGGCTAGCAGTGAGCCGAGATCACG
CCACTGCACTCCAGCCTGGGCAACAGAGCGAGATTCTGTCTCAAAAAAAAAAAAACCAAA
AAACAAAAACTTAGCCGGCAGTTAACGTGCGTAAAGAAGGTTACTTCCAGATTATTCCCA
TCCATCGGTGGATTCTCTCCCATATGCAGTTTAATACCCGGGTGTGGAAATGGGCATATT
GGGGCAATGTTAACCGATTTCGGTGCTATGATTCAGGTCT

consensusID : consensus_9679#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 395
fasta sequence

                              [GTGTCACCTGAGGTCAGGAGTTCGAGACCACAACCTGGTGAAACCCTGTCTCTAGTAAAAATAAAAAAAAAATTAGCTGGGCGTGGTGGCGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGAACGGCGTGAACCCGGGAGGTGGGGCTAGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGATTCTGTCTCAAAAAAAAAAAAAAAACAAAAAACAAAAATTTAGCCGGGGGTTAACGGGGTAAGGAAGGTATTTCCAAATATTCCCATCCATGGGGGATTCTCTCCAATATGCAGTTTAATAACCGTGTGGAAAAGGGATTATTGGGGCAATGTTTACGGATTTCTGTGCTATGAATCAAGTCT]

[+] EMBL CD068624             [GTGTCACCTGAGGTCAGGAGTTCGAGACCACAACCTGGTGAAACCCTGTCTCTAGTAAAAATAAAAAAAAAATTAGCTGGGCGTGGTGGCGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGAACGGCGTGAACCCGGGAGGTGGGGCTAGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGATTCTGTCTCAAAAAAAAAAAAAAAACAAAAAACAAAAATTTAGCCGGGGGTTAACGGGGTAAGGAAGGTATTTCCAAATATTCCCATCCATGGGGGATTCTCTCCAATATGCAGTTTAATAACCGTGTGGAAAAGGGATTATTGGGGCAATGTTTACGGATTTCTGTGCTATGAATCAAGTCT]




>consensus_9679#3
GTGTCACCTGAGGTCAGGAGTTCGAGACCACAACCTGGTGAAACCCTGTCTCTAGTAAAA
ATAAAAAAAAAATTAGCTGGGCGTGGTGGCGGGCACCTGTAGTCCCAGCTACTTGGGAGG
CTGAGGCAAGAGAACGGCGTGAACCCGGGAGGTGGGGCTAGCAGTGAGCCGAGATCACGC
CACTGCACTCCAGCCTGGGCAACAGAGCGAGATTCTGTCTCAAAAAAAAAAAAAAAACAA
AAAACAAAAATTTAGCCGGGGGTTAACGGGGTAAGGAAGGTATTTCCAAATATTCCCATC
CATGGGGGATTCTCTCCAATATGCAGTTTAATAACCGTGTGGAAAAGGGATTATTGGGGC
AATGTTTACGGATTTCTGTGCTATGAATCAAGTCT

consensusID : consensus_9679#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 387
fasta sequence

                              [TGAGTGTGGACTGCGGAAAACCCCTGGACAAAGGAGAAAGCAAAACAAGGGGTGAATGACTCAGGGACAGGAGAGAAATTAAATAAAACCTAAGTAACAGGTGACAACTGGGTGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCACCTGTAGTCCCAGCTACTCTGGAGGCTGAGGCAGGAGAAAGGTGTGAACCCGGAAGGTGGGGCTTGCAGTGAGCCGAGATTTGCGCCACTGCATTCCAGCCTGGGCGACAGAGCGAGACTCCATCTC]

[+] EMBL CD150593             [TGAGTGTGGACTGCGGAAAACCCCTGGACAAAGGAGAAAGCAAAACAAGGGGTGAATGACTCAGGGACAGGAGAGAAATTAAATAAAACCTAAGTAACAGGTGACAACTGGGTGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCACCTGTAGTCCCAGCTACTCTGGAGGCTGAGGCAGGAGAAAGGTGTGAACCCGGAAGGTGGGGCTTGCAGTGAGCCGAGATTTGCGCCACTGCATTCCAGCCTGGGCGACAGAGCGAGACTCCATCTC]




>consensus_9679#4
TGAGTGTGGACTGCGGAAAACCCCTGGACAAAGGAGAAAGCAAAACAAGGGGTGAATGAC
TCAGGGACAGGAGAGAAATTAAATAAAACCTAAGTAACAGGTGACAACTGGGTGCAGTGG
CTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAG
ATCGAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTA
GCCGGGCGTGGTGGCGGGCACCTGTAGTCCCAGCTACTCTGGAGGCTGAGGCAGGAGAAA
GGTGTGAACCCGGAAGGTGGGGCTTGCAGTGAGCCGAGATTTGCGCCACTGCATTCCAGC
CTGGGCGACAGAGCGAGACTCCATCTC

consensusID : consensus_9679#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 376
fasta sequence

                              [TTCATGTGAAGGACGGGGTTTCTACCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGTCACTGCGCCAGGCCCCAAATTCTTAAATCAGGAACACAGTGGCAAGTAATGGCATTAACAAGTCATTAATGTTAGTATATTTGTCTTAAATCTTAGTGATCTGGTTCTAATTTGTTAATAGATTTATTTGTCATATTTCTTTTTCTCCTGTTCTTTTTTTTTAATTTTCCTTTTCTTCTTTTCATATAGAGGATACTCTTTTTTTATTTTCTTCTTTGGAGACAAGGTCTTGCTCTGTGGCCCATGCTGAAGCACAGTGGCGTG]

[+] EMBL CD111672             [TTCATGTGAAGGACGGGGTTTCTACCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGTCACTGCGCCAGGCCCCAAATTCTTAAATCAGGAACACAGTGGCAAGTAATGGCATTAACAAGTCATTAATGTTAGTATATTTGTCTTAAATCTTAGTGATCTGGTTCTAATTTGTTAATAGATTTATTTGTCATATTTCTTTTTCTCCTGTTCTTTTTTTTTAATTTTCCTTTTCTTCTTTTCATATAGAGGATACTCTTTTTTTATTTTCTTCTTTGGAGACAAGGTCTTGCTCTGTGGCCCATGCTGAAGCACAGTGGCGTG]




>consensus_9679#5
TTCATGTGAAGGACGGGGTTTCTACCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTC
AGGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGTCACTGCGC
CAGGCCCCAAATTCTTAAATCAGGAACACAGTGGCAAGTAATGGCATTAACAAGTCATTA
ATGTTAGTATATTTGTCTTAAATCTTAGTGATCTGGTTCTAATTTGTTAATAGATTTATT
TGTCATATTTCTTTTTCTCCTGTTCTTTTTTTTTAATTTTCCTTTTCTTCTTTTCATATA
GAGGATACTCTTTTTTTATTTTCTTCTTTGGAGACAAGGTCTTGCTCTGTGGCCCATGCT
GAAGCACAGTGGCGTG

consensusID : consensus_9679#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 348
fasta sequence

                              [CCATACCCCATGCAGGAGGAGGACTGTGTTGGCTCCCACCACAGGGTGTGTTCTGTGGTAGGATTTCACTCTGACACCCAGGCTGAAGTGCAGTGGCAGGGTTGCCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACCTGTGGTCAGGGGTTGGAAACCAGCCTGGCCAACATGGCGAAACCTCGCCTTTACTAAAAATACAAAAAAAAATTAGCTGGGCGTGGTGGCCCATGCGTGTAATCCATGCTTCTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCAAGATCGCGCC]

[-] EMBL CD122185             [CCATACCCCATGCAGGAGGAGGACTGTGTTGGCTCCCACCACAGGGTGTGTTCTGTGGTAGGATTTCACTCTGACACCCAGGCTGAAGTGCAGTGGCAGGGTTGCCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACCTGTGGTCAGGGGTTGGAAACCAGCCTGGCCAACATGGCGAAACCTCGCCTTTACTAAAAATACAAAAAAAAATTAGCTGGGCGTGGTGGCCCATGCGTGTAATCCATGCTTCTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCAAGATCGCGCC]




>consensus_9679#6
CCATACCCCATGCAGGAGGAGGACTGTGTTGGCTCCCACCACAGGGTGTGTTCTGTGGTA
GGATTTCACTCTGACACCCAGGCTGAAGTGCAGTGGCAGGGTTGCCGGGCACGGTGGCTC
ACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACCTGTGGTCAGGGGT
TGGAAACCAGCCTGGCCAACATGGCGAAACCTCGCCTTTACTAAAAATACAAAAAAAAAT
TAGCTGGGCGTGGTGGCCCATGCGTGTAATCCATGCTTCTTGGGAGGCTGAGGCAGGAGA
ATCGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCAAGATCGCGCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9679#2      ------------------------------------------------------------
consensus_9679#3      ------------------------------------------------------------
consensus_9679#1      ----ACTAAATGGGGCCCTTCTTTGTACGCCCTCCTCTCCCTTAAACACATACATAATGT 56
consensus_9679#4      ------TGAGTGTGGAC------TGCGGAAAACCCCTGGACAAAGGAGAAAGCAAAACAA 48
consensus_9679#0      --AATCTCAACGCTAAA-------GAAACATTTCCTTAGCATCCAGTAGCCATACTGAAT 51
consensus_9679#6      CCATACCCCATGCAGGA-------GGAGGACTGTGTTGGCTCCCACCA--CAGGGTGTGT 51
consensus_9679#5      ------------------------------------------------------------
                                                                                  

consensus_9679#2      ------------------------------------------------------------
consensus_9679#3      ------------------------------------------------------------
consensus_9679#1      CCTACCAGTGACTTAGAGGCTGGAAAGAGATAGCATACCATAGTATAAAAACTGGGCAGC 116
consensus_9679#4      GGGGTGAATGACTCAGGGACAGGAGAGAAATTAAATAA---AACCTAAGTAACAGGTGAC 105
consensus_9679#0      CCGGAAGCGTGCTCTAAATATTAGTATAAACAAATTAGATTTTCCTCTCAAACATGAAGC 111
consensus_9679#6      TCTGTGGTAGGATTTCACTCTGA---CACCCAGGCTGAAGT----------GCA-GTGGC 97
consensus_9679#5      -------------------------TTCATGTGAAGGACGGGGTTTCTACCATGTTGGTC 35
                                                                                  

consensus_9679#2      ------------------------------------------------------------
consensus_9679#3      ------------------------------------------------------------
consensus_9679#1      AGG----CCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGG 172
consensus_9679#4      AA-----CTGGGTGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGG 160
consensus_9679#0      AGGGG-GCCGGGCGCGGTGGTTCACGCCTGTAATCCCAGCACTTTGGAAGGCCGAGAGGG 170
consensus_9679#6      AGGGTTGCCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGG 157
consensus_9679#5      AGGCTGGTCTCGAACTCCTGACCTCA--GGTGATCCGCCCGCCTCAGCCTCCCAAAGTGC 93
                                                                                  

consensus_9679#2      GTGGATCAC-TGAG---GTCAGGAGTTCGAGACCA-------CAACCTGGTGAAACCCTG 49
consensus_9679#3      --GTGTCACCTGAG---GTCAGGAGTTCGAGACCA-------CAACCTGGTGAAACCCTG 48
consensus_9679#1      GCGGATCCC--AAG---GTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCG 227
consensus_9679#4      GCGGATCAC--GAG---GTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCG 215
consensus_9679#0      GCGGATCAC--GAG---GTCAAGAGATTGAGACCATCCTGGCTAACACAGTGAAACCCCG 225
consensus_9679#6      GCGGATCACCTGTG---GTCAGGGGTTGGAAACCAGCCTGGCCAACATGGCGAAACCTCG 214
consensus_9679#5      TGGGATTACAGGAGTGAGTCACTGCGCCAGGCCCCAAATTCTTAAATCA--GGAACACAG 151
                        *  *  *    *   ****           **         **      * ***   *

consensus_9679#2      TCTCTAGTAAAAATAAAAAAAAAA-TTAGCTGGGCGTGGTGGCGGGCACCTGTAGTCCTA 108
consensus_9679#3      TCTCTAGTAAAAATAAAAAAAAAA-TTAGCTGGGCGTGGTGGCGGGCACCTGTAGTCCCA 107
consensus_9679#1      TCTCTACTAAAAATACAAAAAA---TTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCA 284
consensus_9679#4      TCTCTACTAAAAATACAAAAAA---TTAGCCGGGCGTGGTGGCGGGCACCTGTAGTCCCA 272
consensus_9679#0      TCTCTACTAAAAATACAAAAAA---TTAGCCGGGCGTGGTGGCAGGTGCCTGTAGTCCCA 282
consensus_9679#6      CCTTTACTAAAAATACAAAAAAAAATTAGCTGGGCGTGGTGGCCCATGCGTGTAATCCAT 274
consensus_9679#5      TGGCAAGTAATGGCATTAACAA---GTCATTAATGTTAGTA-TATTTGTCTTAAATCTTA 207
                           * ***    *  ** **    *         * **          *  * **   

consensus_9679#2      GCTACTTGGGAGGCTGAGGCAAGAGAACGGCGTGAACCCGGGAGGTGGGGCTAGCAGTGA 168
consensus_9679#3      GCTACTTGGGAGGCTGAGGCAAGAGAACGGCGTGAACCCGGGAGGTGGGGCTAGCAGTGA 167
consensus_9679#1      GCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGA 344
consensus_9679#4      GCTACTCTGGAGGCTGAGGCAGGAGAAAGGTGTGAACCCGGAAGGTGGGGCTTGCAGTGA 332
consensus_9679#0      GCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGA 342
consensus_9679#6      GCTTCTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAGTGA 334
consensus_9679#5      GTGATCT----GGTTCTAATTTGTTAATAG-ATTTATTTGTCATATTTCTTTTTCTCCTG 262
                      *          ** *       *  **  *  *  *   *  *        *  *     

consensus_9679#2      GCCGAGATCA-CGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGATTCTGTCTCAAAAA 227
consensus_9679#3      GCCGAGATCA-CGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGATTCTGTCTCAAAAA 226
consensus_9679#1      GCCGAGATCC-CGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAA 403
consensus_9679#4      GCCGAGATTTGCGCCACTGCATTCCAGCCTGGGCGACAGAGCGAGACTCCATCTC----- 387
consensus_9679#0      TCCGAGATGG-TGCCACTGCATCCCAGCCTGGGAGACAGAGCGAGACTCCGTCTCAAAAC 401
consensus_9679#6      GCCAAGATCG-CGCC--------------------------------------------- 348
consensus_9679#5      TTCTTTTTTTTTAATTTTCCTTTTCTTCTTTTCATATAGAGGATACTCTTTTTTTATTTT 322
                        *    *                                                    

consensus_9679#2      AAAAAAAAC--CAAAAAACAAAAACTTAGCCGGCAGTTAACGTGCGTAAAGAAGGTTACT 285
consensus_9679#3      AAAAAAAAAAACAAAAAACAAAAATTTAGCCGGGGGTTAACG-GGGTAAGGAAGGT-ATT 284
consensus_9679#1      AAAAAAAAAAAAAAAAAAAAAAAAANCTGGGCAGCAAGCAGGGATCAAGACACCAACCCT 463
consensus_9679#4      ------------------------------------------------------------
consensus_9679#0      AAACAAACAAAGAAACAAACAAACAAACCAAAAAACCCATGAAGCAGGGGTATGTTATTA 461
consensus_9679#6      ------------------------------------------------------------
consensus_9679#5      CTTCTTTGGAGACAAGGTCTTGCTCTGTGGCCCATGCTGAAGCACAGTGGCGTG------ 376
                                                                                  

consensus_9679#2      TCCAGATTATTCCCATCCATCGGTGGATTCTCTCCCATATGCAGTTTAATACCCGGGTGT 345
consensus_9679#3      TCCAAAT-ATTCCCATCCAT-GGGGGATTCTCTCCAATATGCAGTTTAATAACCG--TGT 340
consensus_9679#1      GTGCTTA----------------------------------------------------- 470
consensus_9679#4      ------------------------------------------------------------
consensus_9679#0      ATTTAAGGGAATATACTTATCAAAAAGGGAATGTATCTATGAAAATATACAATGTATCAG 521
consensus_9679#6      ------------------------------------------------------------
consensus_9679#5      ------------------------------------------------------------
                                                                                  

consensus_9679#2      GGAAATGGGCATATTGGGGCAATGTTAACCGATTTCGGTGCTATGATTCAGGTCT 400
consensus_9679#3      GGAAAAGGGATTATTGGGGCAATGTTTACGGATTTCTGTGCTATGAATCAAGTCT 395
consensus_9679#1      -------------------------------------------------------
consensus_9679#4      -------------------------------------------------------
consensus_9679#0      GCA---------------------------------------------------- 524
consensus_9679#6      -------------------------------------------------------
consensus_9679#5      -------------------------------------------------------