| These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs : 
 consensusID : consensus_9690#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 629 fasta sequence 
                              [AACTGACGTAACAAGTATGGAATGCATTCTGGAATCTGGAATGCTCAGGATTGGCAACGTTCACTAGATTGGAGATTCGTGATGACGGTATGACGCAAATATATGGAGAAGACCAACACGGATGTATGGACGATCTTATTCCAGTCAATTCTAATTCTGAATTTCACGTTTCCCATCACAAGAAATCAATCTCTGTTAGGTGGTCTGTTCAGCTAGACGTTGGTGCTGCACGGTCGAATTGTAAGTTTCCATTTTCCAATGTGACAGTCTGATTCCAGTTAGAACTCAGTTGTCAGTTCAACCTGCACATCAAATCCTGTTTTTCTATTGAATCATAAATACACCTCTGCTTTTCAGATCAAGTCGCTGTTACAACGAACGACCAGGTTACTATTGTGAGAGCATGTGAATTTGAATTGAGGAAGTGAAATCAATACTTCAGATTGATGAACATTTCTTCATTCAATCTCATTCAATGCTCAACGGAAGGAACACATGCTCAAACAATCACATCCATAATCGCACTCAACAATTATAGATAGATTTATTGAGGTAACTGATACGTTTCCTACTGCAGTCAGGAAGATTTTTGTGGGACAAATGTATCAAATGAATCAATTTCTGCTCAA]
[+] EMBL CD067901             [AACTGACGTAACAAGTATGGAATGCATTCTGGAATCTGGAATGCTCAGGATTGGCAACGTTCACTAGATTGGAGATTCGTGATGACGGTATGACGCAAATATATGGAGAAGACCAACACGGATGTATGGACGATCTTATTCCAGTCAATTCTAATTCTGAATTTCACGTTTCCCATCACAAGAAATCAATCTCTGTTAGGTGGTCTGTTCAGCTAGACGTTGGTGCTGCACGGTCGAATTGTAAGTTTCCATTTTCCAATGTGACAGTCTGATTCCAGTTAGAACTCAGTTGTCAGTTCAACCTGCACATCAAATCCTGTTTTTCTATTGAATCATAAATACACCTCTGCTTTTCAGATCAAGTCGCTGTTACAACGAACGACCAGGTTACTATTGTGAGAGCATGTGAATTTGAATTGAGGAAGTGAAATCAATACTTCAGATTGATGAACATTTCTTCATTCAATCTCATTCAATGCTCAACGGAAGGAACACATGCTCAAACAATCACATCCATAATCGCACTCAACAATTATAGATAGATTTATTGAGGTAACTGATACGTTTCCTACTGCAGTCAGGAAGATTTTTGTGGGACAAATGTATCAAATGAATCAATTTCTGCTCAA]
[-] EMBL CD163809             [                                                                                                                           cgactGACGATCTTATTCCAGTCAATTCTAATTCTGAATTTCACGTTTCCCATCACAAGAAATCAATCTCTGTTAGGTGGTCTGTTCAGCTAGACGTTGGTGCTGCACGGTCGAATTGTAAGTTTCCATTTTCCAATGTGACAGTCTGATTCCAGTTAGAACTCAGTTGTCAGTTCAACCTGCACATCAAATCCTGTTTTTCTATTGAATCATAAATACACTTCTGCTTTTCAGATCAAGTCGCTGTTACAACGAACGACCAGGTTACTATTGTGAGAGCATGTGAATTTGAATTGAGGAAGTGAAATCAATACTTCAGATTGATGAACATTTCTTCATTCAATCCCATTCAATGCTCAACGGAAGGAACACATGCTCAAACAATCACATCTATAATCGCTCTCAACAATTATAGATAGATTTATTGAGGTAACTGATACGTTT                                                              ]
consensusID : consensus_9690#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 547 fasta sequence 
                              [GCACTTCAGTATGATGAAGATTTCTTCATTCAATCTCGTTCACTTCTTAACGGTGTATTGAAGGAACATATGCTTGAAGAATCATATCCGTAATCGCACTCAACAATTATAGATATATTTAACGAGGTAACTGTTACGTTTCCTACTGCAATCAGGAAGTGTTTTGTAGGATAAATGTTTCAAATGATCAAATGTCTGATAATGACGATGCTTATATTTGAGATTCATTAGTTGCTAATGAAGTCGTTAGTGAATTTGAGAAAAATATTTCATATGAATGAA-ATAGTGGTGAAATACGTGATGTTGCTCGTTTCCACAATGCTTATGATTGCAGAGCAAGCCTTGGTCAATATGAAGCACAAGTTCTCAATCTGTTCAAATCTAACGATAGTTCTGATGGTTCCAATTCAAACTTTATTTATACTCACAATCCATCTACTGCTAATCAATGTGAGAAACACGTTTCAAA-CGAGTCGCATCCTGATCACATTTCACATGTTATTGTAGCAGATGTTTGGTGCTTGTCATGCA-TATATATGTCACATAG]
[+] EMBL CD192518             [GCACTTCAGTATGATGAAGATTTCTTCATTCAATCTCGTTCACTTCTTAACGGTGTATTGAAGGAACATATGCTTGAAGAATCATATCCGTAATCGCACTCAACAATTATAGATATATTTAACGAGGTAACTGTTACGTTTCCTACTGCAATCAGGAAGTGTTTTGTAGGATAAATGTTTCAAATGATCAAATGTCTGATAATGACGATGCTTATATTTGAGATTCATTAGTTGCTAATGAAGTCGTTAGTGAATTTGAGAAAAATATTTCATATGAATGAA ATAGTGG                                                                                                                                                                                                                                                                    ]
[-] EMBL CD166627             [                                                                                                                ATATATTTAACGAGGTAACTGTTACGTTTCCTACTGCAATCAGGAAGTGTTTTGTAGGATAAATGTTTCAAATGATCAAATGTCTGATAATGACGATGCTTATATTTGAGATTCATTAGTTGCTAATGAAGTCGTTAGTGAATTTGAGAAAAATATTTCATATGAATGAA ATAGTGGTGAAATACGTGATGTTGCACGTTTCCACAATGCTTATGATTGCAGAGCAAGCCTTGGTCAATATGAAGCACAAGTTCTCAATCTGTTCAAATCTAACGATAGTTCTGATGGTTCCAATTCAAACTTTATTTATACTCACAATCCATCTACTGCTAATCAATGTGAGAAACATGTTTCAAAGCGAGTCGCATCCTGATCACATTTCACATGTTATTGTAGCAGATGTTTGGTGCTTGTCATGCA TATATATGTCACATAG]
[+] EMBL CD166790             [                                                                                                              aacTATATTTAACGAGGTAACTGTTACGTTTCCTACTGCAATCAGGAAGTGTCTCGTAGGATAAATGTTTCAAATGATCAAATGTCTGATAATGACGATGCTTATATTTGAGATTCATTAGTTGCTAATGAAGTCGTTAGTGAATTTGAGAAAAATATTTCATATGAATGAACATAGTGGTGAAATACGTGATGTTGCTCGTTTCCACAATGCTTATGATTGCAGAGCAAGCCTTGGTCAATATGAAGCACAAGTTCTCAATCTGTTCAAATCTAACGATAGTTCTGATGGTTCCAATTCAAACTTTATTTATACTCACAATCCATCTACTGCTAATCAATGTGAGAAACACGTTTCAAA CGAGTCGCATCCTGATCACATTTCACATGTTATTGTAGCAGATGTTTGGTGC TGTCATGCATTATATAT         ]
[+] EMBL CD064329             [                                                                                                                                                                                                                                                                                                 ttgcgATACGTGATGTTGCTCGTTTCCACAATGCTTATGATTGCAGAGCAAGCCTTGGTCAATATGAAGCACAAGTTCTCAATCTGTTCAAATCTAACGATAGTTCTGATGGTTCCAATTCAAACTTTATTTATACTCACAATCCATCTACTGCTAATCAATGTGAGAAACACGTTTCACA CGAGTCGCATCCTGATCACATTTCA                                                      ]
consensusID : consensus_9690#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 470 fasta sequence 
                              [CATGGCTCCCGNGCCGCCATGGTCGGCCGCGGGAAATTCGATTTTGAGGCACACACGAGACAACGGAAGGAACACATGCTCAAACAATCACATCCATAATCGCACTCAACAATTATAGATAGATTTATTGAGGTAACTGATACGTTTCCTACTGCAGTCAGGAAGATTTTTGTGGGACAAATGTATCAAATGAATCAATTTCTGCTCGACTTTGTGATGATGATGTTGATGATATTTGAGATTCATTAGTTGCTAATGAAGTCCTTAGTGAATTGAAGAAAGATATTTCATGTGAAGTAAATTGTGGTGAAATACGTGATGTTGCTCGTTTTCACAATGCTTATGATTGCAGAACAAACCTTGGTCAATATGAAGCACAAGTTCTCAATCTGTTCAAATCTAACGATAGTTCTGAAGGTTCCCAATTCACACTTTATTTATACTCACAATCCATCTACTGCTAATCAATG]
[+] EMBL CD164519             [CATGGCTCCCGNGCCGCCATGGTCGGCCGCGGGAAATTCGATTTTGAGGCACACACGAGACAACGGAAGGAACACATGCTCAAACAATCACATCCATAATCGCACTCAACAATTATAGATAGATTTATTGAGGTAACTGATACGTTTCCTACTGCAGTCAGGAAGATTTTTGTGGGACAAATGTATCAAATGAATCAATTTCTGCTCGACTTTGTGATGATGATGTTGATGATATTTGAGATTCATTAGTTGCTAATGAAGTCCTTAGTGAATTGAAGAAAGATATTTCATGTGAAGTAAATTGTGGTGAAATACGTGATGTTGCTCGTTTTCACAATGCTTATGATTGCAGAACAAACCTTGGTCAATATGAAGCACAAGTTCTCAATCTGTTCAAATCTAACGATAGTTCTGAAGGTTCCCAATTCACACTTTATTTATACTCACAATCCATCTACTGCTAATCAATG]
consensusID : consensus_9690#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 462 fasta sequence 
                              [CGACCTCGGTACCCGATGCTTATATTTGAGAATCATTAGTTGCTAATGAAGTCGTTAGTGAATTTGAGAAAAATATTTCATATGAATGAAATAGTGGTGAAATACGTGATGTTGCTCGTTTCCAAAATGCTTATGATTGCAGAGCAAGCCTTGGTCAATATGAAGCACAAGTTCTCAATCCGTTCAAATCTAACGATAGTTCTGATGGTTCCAATTCAAACTTTATTTATACTCACAATCCATCTACTGCTAATCAATGTGAGAAACATGTTTCAGACGAGTCGCATCCTGATCACATTTCACATGTTATTGTAGCAGATGTTTGGTGCTGTCATGCATTATATATGTCACATAGATACTCCTCTGAATGCTCGAATGAATGAACTGACGTAACAAGTATGGAATGCATTCTGGAATCTGGAATGTTCAGGATTGACAACGTTCACATAGTGGGAAAATTCA]
[+] EMBL CD168226             [CGACCTCGGTACCCGATGCTTATATTTGAGAATCATTAGTTGCTAATGAAGTCGTTAGTGAATTTGAGAAAAATATTTCATATGAATGAAATAGTGGTGAAATACGTGATGTTGCTCGTTTCCAAAATGCTTATGATTGCAGAGCAAGCCTTGGTCAATATGAAGCACAAGTTCTCAATCCGTTCAAATCTAACGATAGTTCTGATGGTTCCAATTCAAACTTTATTTATACTCACAATCCATCTACTGCTAATCAATGTGAGAAACATGTTTCAG                                                                                                                                                                                          ]
[+] EMBL CD188388             [                                                                                                                                                                                                                        CAAACTTTATTTATACTCACAATCCATCTACTGCTAATCAATGTGAGAAACATGTTTCAAACGAGTCGCATCCTGATCACATTTCACATGTTATTGTAGCAGATGTTTGGTGCTGTCATGCATTATATATGTCACATAGATACTCCTCTGAATGCTCGAATGAATGAACTGACGTAACAAGTATGGAATGCATTCTGGAATCTGGAATGTTCAGGATTGACAACGTTCACATAGTGGGAAAATTCA]
consensusID : consensus_9690#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 329 fasta sequence 
                              [TGGTTGGATTGAATGAACATGAACTATGCTCGAGATGACACACAGTATGTGATTTATGATAATTCCGTGTATTTTGCATATTTGTGTCTACAGGGTCGAATTGTAAGTTTCCATTTTCCAATGTGACAGTCTGATTCCAGTTAGAACTCAGTTGTCAGTTCAACCTGCACATCAAATCCTGTTTTTCTATTGAATCATAAATACACTTCTGCTTTTCAGATCAAGTCGCTGTTACAACGAACGACCAGGTTACTATTGTGAGAGCATGTGAATTTGAATTGAGGAAGTGAAATCAATACTTCAGATTGATGAACATTTCTTCATTCAAT]
[-] EMBL CD061449             [TGGTTGGATTGAATGAACATGAACTATGCTCGAGATGACACACAGTATGTGATTTATGATAATTCCGTGTATTTTGCATATTTGTGTCTACAGGGTCGAATTGTAAGTTTCCATTTTCCAATGTGACAGTCTGATTCCAGTTAGAACTCAGTTGTCAGTTCAACCTGCACATCAAATCCTGTTTTTCTATTGAATCATAAATACACTTCTGCTTTTCAGATCAAGTCGCTGTTACAACGAACGACCAGGTTACTATTGTGAGAGCATGTGAATTTGAATTGAGGAAGTGAAATCAATACTTCAGATTGATGAACATTTCTTCATTCAAT]
[-] EMBL CD061445             [TGGTTGGATTGAATGAACATGAACTATGCTCGAGATGACACACAGTATGTGATTTATGATAATTCCGTGTATTTTGCATATTTGTGTCTACAGGGTCGAATTGTAAGTTTCCATTTTCCAATGTGACAGTCTGATTCCAGTTAGAACTCAGTTGTCAGTTCAACCTGCACATCAAATCCTGTTTTTCTATTGAATCATAAATACACTTCTGCTTTTCAGATCAAGTCGCTGTTACAACGAACGACCAGGTTACTATTGTGAGAGCATGTGAATTTGAATTGAGGAAGTGAAATCAATACTTCAGATTGATGAACATTTCTTCATTCAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9690#1      --------GCACTTCAGTATGATGAAGATTTCTTCATTCAATCTCGTTCACTTCTTAACG 52
consensus_9690#3      ------------------------------------------------------------
consensus_9690#2      CATGGCTCCCGNGCCGCCATGGTCGGCCGCGGGAAATTCGATTTTG--AGGCACACACGA 58
consensus_9690#0      ------------------------------------------------------------
consensus_9690#4      ------------------------------------------------------------
                                                                                  
consensus_9690#1      GTGTATTGAAGGAACATATGCTTGAAGAATCATATCCGTAATCGCACTCAACAATTATAG 112
consensus_9690#3      ------------------------------------------------------------
consensus_9690#2      GACAACGGAAGGAACACATGCTCAAACAATCACATCCATAATCGCACTCAACAATTATAG 118
consensus_9690#0      -------AACTGACGTAACAAGTATGGAATGCATTCTGGAATCTGGAATGCTCAGGATTG 53
consensus_9690#4      ------------------------------------------------------------
                                                                                  
consensus_9690#1      ATATATTTAACGAGGTAACTGTTACGTTTCCTACTGCAATCAGGAAGTGTTTTGTAGGAT 172
consensus_9690#3      ------------------------------------------------------------
consensus_9690#2      ATAGATTTATTGAGGTAACTGATACGTTTCCTACTGCAGTCAGGAAGATTTTTGTGGGAC 178
consensus_9690#0      GCAACGTTCACTAGATTGGAGATTCGTGATGACGGTATGACGCAAATATATGGAGAAGAC 113
consensus_9690#4      ------------------------------------------------------------
                                                                                  
consensus_9690#1      AAATGTTTCAAATGATCAAATGTCT------------GATAATGACGATGCTTATATTTG 220
consensus_9690#3      -----------------CGACCTC-------------GGTACC--CGATGCTTATATTTG 28
consensus_9690#2      AAATGTATCAAATGAATCAATTTCTGCTCGACTTTGTGATGATGATGTTGATGATATTTG 238
consensus_9690#0      CAACACGGATGTATGGACGATCTTATTCC-AGTCAATTCTAATTCTGAATTTCACGTTTC 172
consensus_9690#4      -----------------TGGTTGGATTG--AATGAACATGAACTATG--CTCGAGATGAC 39
                                                                    *      *  *   
consensus_9690#1      AGATTCATTAGTTGCTAATGA-AGTCGTTAGTGAATTTGAGAAAAATATTTCATATGAAT 279
consensus_9690#3      AGAATCATTAGTTGCTAATGA-AGTCGTTAGTGAATTTGAGAAAAATATTTCATATGAAT 87
consensus_9690#2      AGATTCATTAGTTGCTAATGA-AGTCCTTAGTGAATTGAAGAAAGATATTTCATGTGAAG 297
consensus_9690#0      CCA-TCACAAGAAATCAATCTCTGTTAGGTGGTCTGTTCAGCTAGACGTTG-GTG-CTGC 229
consensus_9690#4      ACA-CAGTATGTGATTTATGATAATTCCGTG---TATTTTGC---ATATTT-GTGTCTAC 91
                        *       *      **     *     *     *   *    *  **   *      
consensus_9690#1      GAAATAGTGGTGAAATACGTGATGTTGCTCGTTTCCACAATGCTTATGATTGCAGAGCAA 339
consensus_9690#3      GAAATAGTGGTGAAATACGTGATGTTGCTCGTTTCCAAAATGCTTATGATTGCAGAGCAA 147
consensus_9690#2      TAAATTGTGGTGAAATACGTGATGTTGCTCGTTTTCACAATGCTTATGATTGCAGAACAA 357
consensus_9690#0      ACGGTCGAATTGTAAGTTTCCATTTTCCAATGTGACAGTCTGATTCCAGTTAGAACTCAG 289
consensus_9690#4      AGGGTCGAATTGTAAGTTTCCATTTTCCAATGTGACAGTCTGATTCCAGTTAGAACTCAG 151
                          * *   ** **      ** ** *    *  **   ** **    **  *   ** 
consensus_9690#1      GCCTTGGT-CAATATGAAGCACAAGTTCT--CAATCTGTTCAAATCTAACGATAGTTCTG 396
consensus_9690#3      GCCTTGGT-CAATATGAAGCACAAGTTCT--CAATCCGTTCAAATCTAACGATAGTTCTG 204
consensus_9690#2      ACCTTGGT-CAATATGAAGCACAAGTTCT--CAATCTGTTCAAATCTAACGATAGTTCTG 414
consensus_9690#0      TTGTCAGTTCAACCTGCACATCAAATCCTGTTTTTCTATTGAATCATAAATACACCTCTG 349
consensus_9690#4      TTGTCAGTTCAACCTGCACATCAAATCCTGTTTTTCTATTGAATCATAAATACACTTCTG 211
                         *  ** ***  ** *   *** * **     **  ** **   ***  * *  ****
consensus_9690#1      ATGGTTCC-AATTCAAACTTTATTTATACTCACAATCCATCTACTGCTAATCAATGTGAG 455
consensus_9690#3      ATGGTTCC-AATTCAAACTTTATTTATACTCACAATCCATCTACTGCTAATCAATGTGAG 263
consensus_9690#2      AAGGTTCCCAATTCACACTTTATTTATACTCACAATCCATCTACTGCTAATCAATG---- 470
consensus_9690#0      CT--TTTCAGATCAAGTCGCTGTTACAACGAACGACCAGGTTACTATTGTGAGAGCATGT 407
consensus_9690#4      CT--TTTCAGATCAAGTCGCTGTTACAACGAACGACCAGGTTACTATTGTGAGAGCATGT 269
                          ** *  **  *  *  * **   **  ** * *    ****  *     *      
consensus_9690#1      AAACACGTTTCAAACGAGTCGCATCCTGATCACATTTCACATGTTATTGTAGCAGATGTT 515
consensus_9690#3      AAACATGTTTCAGACGAGTCGCATCCTGATCACATTTCACATGTTATTGTAGCAGATGTT 323
consensus_9690#2      ------------------------------------------------------------
consensus_9690#0      GAATTTGAATTGAGGAAGTGAAATCAATACTTCAGATTGATGAACATTTCTTCATTCAAT 467
consensus_9690#4      GAATTTGAATTGAGGAAGTGAAATCAATACTTCAGATTGATGAACATTTCTTCATTCAAT 329
                                                                                  
consensus_9690#1      TGGTGCTTGTCATGCAT-ATATATGTCACATAG--------------------------- 547
consensus_9690#3      TGGTGCT-GTCATGCATTATATATGTCACATAGATACTCCTCTGAATGCTCGAATGAATG 382
consensus_9690#2      ------------------------------------------------------------
consensus_9690#0      CTCATTCAATGCTCAACGGAAGGAACACATGCTCAAACAATCACATCCATAATCGCACTC 527
consensus_9690#4      ------------------------------------------------------------
                                                                                  
consensus_9690#1      ------------------------------------------------------------
consensus_9690#3      AACTGACGTAACAAGTATGGAATGCATTCTGGAATCTGGAATGTTCAGGATTGACAACGT 442
consensus_9690#2      ------------------------------------------------------------
consensus_9690#0      AACAATTATAGATAGATTTATTGAGGTAACTGATACGTTTCCTACTGCAGTCAGGAAGAT 587
consensus_9690#4      ------------------------------------------------------------
                                                                                  
consensus_9690#1      ------------------------------------------
consensus_9690#3      TCACATAGTGGGAAAATTCA---------------------- 462
consensus_9690#2      ------------------------------------------
consensus_9690#0      TTTTGTGGGACAAATGTATCAAATGAATCAATTTCTGCTCAA 629
consensus_9690#4      ------------------------------------------
                                                                
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||