These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9693#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1014 fasta sequence [TCATTCAAAAATCAACACTTATACTAAATACTACTATTGTTAATAAAATAGAGTTGGTTACTTCCTTGGAGTTATTTTTGCTCAAAAACAAATACTTTATTTCATTCCCATGTCTTTGTTTTGCTGAAACCTAATTGACTTGAAGTAGCATTATCATATTTCATCCGACCATCTATAATTTCTGGTCTTTTTTTTCTGTCACATTTTATATGACGATTGTAGGAGAGTGAGAGAAGAAGGGTGTTGTATTTCTTATCTTCATGGAATTATAGAAAATACGTTTTCTTTTATTTCTGGATCATTCATTAATATACTACTACTATTAATACTATGCCTTTTTTTCATGAAAACTTCCATTTTTTAGTTGAACATATTATGATGATGAAATCATACTTGGTCTTTTGCCAATTTCACGTTTGTCCTGTTCTTATTTCTTTCTTGGTTGTTTCGATTTTCCTACCTTCGTAGACCTTACATAACCATGGAAATGCT-TCGAAAGTAATCTGTTAAGTGAATTTTTTTTAGAAAAAGAATATATGTACACTTATTTCGTAGTGTATTTTTACTCTGCCTTCGCCCTTCTCTTTGCATTCATCTAAGTTGACTAAAATGAATTAACTGGAATGTTATTTCTCGTCTGTTTTCCTGATAAATCCGAAGCCTTTTTAGTTTACTTACTGACTTCTGTGTTGCTTTCAACATTATCCAACTGTAAGCATACGTACCTTGCAATAAACTACTGATTAG-TTGTTTGTTTTTCATCGGTTGTCTTTTTTAAAGATCCAATTTATTTAGGTATGCTGATGTGGACGATAGAAGTGAGCATCAAATTAATGCTCTATAATCTTTCTAAACATTATTCAAGACCTATGCACATCATATTAGAACAGCTGACTGACTAATGTATTTGTCATGTTCACCACCCAAAATACATATTTCCAATGTTTTTATTTTGATAAATCTCAGCATCAACTCAACGCCTGCTATTATTATTAGTAGTTATATGCCTTTTCA] [+] EMBL CD152981 [TCATTCAAAAATCAACACTTATACTAAATACTACTATTGTTAATAAAATAGAGTTGGTTACTTCCTTGGAGTTATTTTTGCTCAAAAACAAATACTTTATTTCATTCCCATGTCTTTGTTTTGCTGAAACCTAATTGACTTGAAGTAGCATTATCATATTTCATCCGACCATCTATAATTTCTGGTCTTTTTTTTCTGTCACATTTTATATGACGATTGTAGGAGAGTGAGAGAAGAAGGGTGTTGTATTTCTTATCTTCATGGAATTATAGAAAATACGTTTTCTTTTATTTCTGGATCATTCATTAATATACTACTACTATTAATACTATGCCTTTTTTTCATGAAAACTTCCATTTTTTAGTTGAACATATTATGATGATGAAATCATACTTGGTCTTTTGCCAATTTCACGTTTGTCCTGTTCTTATTTCTTTCTTGGTTGTTTCGATTTTCCTACCTTCGTAGACCTTACATAACCATGGAAATGCT TCGAAAGTAATCTGTTAAGTGAATTTTTTTTAGAAAAAGAATATATGTACACTTATTT ] [+] EMBL CD079269 [ GTTATTTTTGCTCAAAAACAAATACTTTATTTCATTCCCATGTCTTTGTTTTGCTGAAACCTAATTGACTTGAAGCAGCATTATCATATTTCATCCGACCATCTATAATTTCTGGTCTTTTTTTTCTGTCACATTTTATATGACGATTGTATGACAGTGAGAGAAGAAGGGTGTTGTATTTCTTATCTTCATGGAATTATAGAAAATACGTTTTCTTTTATTTCTGGATCATTCATTAATATACTACTACTATTAATACTATGCCTTTTTTTCATGAAAACTTCCATTTTTTAGCTGAACATATTATGATGATGAAATCATACTTGGTCTTTTGCCAATTTCACGTTTGACCTGGTCTTATTTCTTTCTTGTTTGTTTCGATTTTCCTACCTTCGTAGACCTTACATAACCATGGAAATGCT TAGAAAGTAATCTGTTAAGCGAATTATTTTTAGAACAAGAATATATGTACACTTATTTCGTGNAGTATTTTTACTCTGCCTTCGCCCTTCTCTCTGCATTCATCTAAGTTGACTAAAATGAATTAGCTGGAATGTTATTTCTCGTCTGATCTCCTGATAAATCCGAAGCCTTTATAGTTAACTTACTGACTTCCGTGNTGCTTTC ACATTATCCAACTGTAAGCATACGTACCTTGCANTAGACTACTGATTAGCTTG TTGTTCTTCnganaatg ] [+] EMBL AI067689 [ ATTCCCATGTCTTTGTTTTGCTGAAACCTAATTGACTTGAAGTAGCATTATCATATTTCATCCGACCATCTATAATTTCTGGTCTTTTTTTTCTGTCACATTTTATATGACGATTGTAGGAGAGTGAGAGAAGAAGGGTGTTGTATTTCTTATCTTCATGGAATTATAGAAAATACGTTTTCTTTTATTTCTGGATCATTCATTAATATACTACTACTATTAATACTATGCCTTTTTTTCATGAAAACTTCCATTTTTTAGTTGAACATATTATGATGATGAAATCATACTTGGTCTTTTGCCAATTTCACGTTTGTCCTGTTCATACTTCTTTCTTGTTTGTTTCGATTTTCCTACCTTCGTAGACCTTACATAACCATGGAAATGCT TCGAAAGTAATCTGT ] [+] EMBL CD149173 [ TGTTGTATTTCTTATCTTCATGGAATTATAGAAAATACGTTTTCTTTTATTTCTGGATCATTCATTAATATACTACTACTATTAATACTATGCCTTTTTTTCATGAAAACTTCCATTTTTTACTTGAACATATTATGATGATGAAATCATACTTGGTCTTTTGCCAATTTCACGTTTGACCTGTTCTTATTTCTTTCTTGGTTGTTTCGATTTTCCTACCTTCGTAGACCTTACATAACCATGGAAATGCT TCGAAAGTAATCTGTTAAGTGAATTTTTTTTAGAAAAAGAATATATGTACACT ] [+] EMBL CD149165 [ TGTTGTATTTCTTATCTTCATGGAATTATAGAAAATACGTTTTCTTTTATTTCTGGATCATTCATTAATATACTACTACTATTAATACTATGCCTTTTTTTCATGAAAACTTCCATTTTTTAGTTGAACATATTATGATGATGAAATCATACTTGGTCTTTTGCCAATTTCACGTTTGTCCTGTTCTTATTTCTTTCTTGCTTGTTTCGATTTTCCTACCTTCGTAGACCTTACATAACCATGGAAATGCTCTC AAAGTAATCTGTTAAGTGAAT ] [+] EMBL CD149340 [ TGTTGTATTTCTTATCTTCATGGAATTATGGAAAATACGTTTTCTTTTATTTCTGGATCATTCATTAATATACTACTACTATTAATACTATGCCTTTTTTTCATGAAAACTTCCATTTTTTAGTTGAACATATTATGATGATGAAATCATA ] [+] EMBL CD083056 [ CGATTTTCCTACCTTCGTAGACCTTACATAACCATGGAAATGCT TCGAAAGTAATCTGTTAAGTGAATTTTTTTTAGAAAAACAATATATGTACACTTATTTCGTAGTGTATTTTTACTCTGCCTTCGCCCTTCTCTTTGCATTCATCTAAGTTGACTAAAATGAATTAACTGGAATGTTATTTCTCGTCTGTTTTCCTGATAAATCCGAAGCCTTTTTAGTTTACTTACTGACTTCTGTGTTGCTTTCAACATTATCCAACTGTAAGCATACGTACCTTGCAATAAACTACTGATTAG TTGTTTGTTTTTCATCGGTTGTCTTTTTTAAAGATCCAATTTATTTAGGTATGCTGATGTGGACGATAGAAGTGAGCATCAAATTAATGCTCTATAATCTTTCTAAACATTATTCAAGACCTATGCACATCATATTAGAACAGCTGACTGACTAATGTATTTGTCATGTTCACCACCCAAAATACATATTTCCCATGTTTTTATTTTGATAAATCTCAGCATCAACTCAACGCCTGCTATTATTATTAGTAGT ] [-] EMBL CD153272 [ TTTCCTACCTTCGTAGACCTTACATAACCATGANAATGCT TCGAAAGTAATCTGTTAAGTGAATTTTTTTTAGAAAAAGAATATATGTACACTTATTTCGTAGTGTATTTTTACTCTGCCTTCGCCCTTCTCTTTGCATTCATCTAAGTTGACTAAAATGAATTAACTGGAATGTTATTTCTCGTCTGTTTTCCTGATAAATCCGAAGCCTTTTTAGTTTACTTACTGACTTCTGTGTTGCTTTCAACATTATCCAACTGTAAGCATACGTACCTTGCAATAAACTACTGATTAG TTGTTTGTTTTTCATCGGTTGTCTTTTTTAAAGATCCAATTTATTTAGGTATGCTGATGTGGACGATAGAAGTGAGCATCAAATTAATGCTCTATAATCTTTCTAAACATTATTCAAGACCTATGCACATCATATTAGAACAGCTGACTGACTAATGTATTTGTCATGTTCACCACCCAAAATACATATTTCCAATGTTTTTATTTTGATAAATCTCAGCATCAACTCAACGCCTGCTACTGTGTTTCGTTGTTATATGCCTTTTCA] [-] EMBL CD060991 [ ATATGTACACTTATTTCGTAGTGTATTTTTACTCTGCCTTCGCCCTTCTCTTTGCATTCATCTAAGTTGACTAAAATGAATTAACTGGAATGTTATTTCTCGTCTGTTTTCCTGATAAATCCGAAGCCTTTTTAGTTTACTTACTGACTTCTGTGTTGCTTTCAACATTATCCAACTGTAAGCATACGTACCTTGCAATAAACTACTGATTAG TTGTTTGTTTTTCATCGGTTGTCTTTTTTAAAGATGCAATTTATATAGGTATGCTGATGTGTCCGATAGAAGTGAGCATCGAACTAATGCTCTATAATCCTTCTAAACATTATTCAAGACCTATGCACATCATATTAGAACATCTGACTGTCTAATGTATTTGTCATGTTCACCACCCAAAATACATATTTCCAATGTTTTCATTTTGATAAATCTCAGCATCA ] [-] EMBL CD149388 [ ATATGTACACTTATTTCGTAGTGTATTTTTACTCTGCCTTCGCCCTTCTCTTTGCATTCATTTAAGTTGACTAAAATGAATTAACTGGAATGTTATTTCTCGTCTGTTTTCCTGATAAATCCGAAGCCTTTTTAGTTTACTTACTGACTTCTGTGTTGCTTTCAACATTATCCAACTGTAAGCATACGTACCTTGCAATAAACTACTGATTAG TTGTTTGTTTTTCATCGGTTGTCTTTTTTAAAGATCCAATTTATTTAGGTATGCTGATGTGGACGATAGAAGTGAGCATCAAATTAATGCTCTATAATCTTTCTAAACATTATTCAAGACCTATGCACATCATATTAGAACAGCTGACTGACTAATGTATTTGTCATGTTCACCACCCAAAATACATATTTCCAATGTTTTTAT ] [-] EMBL CD149281 [ CATCTAAGTTGACTAAAATGAATTAACTGGAATGTTATTTCTCGTCTGTTTTCCTGATAAATCCGAAGCCTTTTTAGTTTACTTACTGACTTCTGTGTTGCTTTCAACATTATCCAACTGTAAGCATACGTACCTTGCAATAAACTACTGATTAG TTGTTTGTTTTTCATCGGTTGTCTTTTTTAAAGATCCAATTTATTTAGGTATGCTGATGTGGACGATAGAAGTGAGCATCAAATTAATGCTCTATAATCTTTCTAAACATTATTCAAGACCTATGCACATCATATTAGAACAGCTGACTGACTAATGTATTTGTCATGTTCACCACCCAAAATACATATTTCCAATGTTTTTAT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||