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Schistosoma mansoni
cluster # 9694 cluster # 9694       Sequences # 11       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9694#0 length = 1067 sequences # 5  
consensus_9694#1 length = 817 sequences # 3  
consensus_9694#2 length = 470 sequences # 1  
consensus_9694#3 length = 345 sequences # 1  
consensus_9694#4 length = 317 sequences # 1  

consensusID : consensus_9694#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1067
fasta sequence
                              [CGACTGCCTCAACTACTAGTCCCTCACATCCTGCTTCATGTATGCTTAAAGATGAGGATTCGAGTGCTAGCAAACAGTCTTCTAGTTTTTTTATGAGGCAAAACAAACGTCCTGCTCTTGAAGGTTTGTCTCCTTCTAGTCCACTGCCCCGTAAATGTCGTCATTCATCTGGAAGTGATTCTGTAGTCGGAGCTATTACAACGAGATCTAAATAAAAATTTATGAATGCCTTTTAAGCTTAAAGCCATATCCAATTTCGATGTGACAAAAGATGAACGCGATGGAAAGGTTCGCGATGTATGTGATCATGCTGTTTGGAGCCTTTCTTCATGTAAACCAGGTCATGGTATCGACCAATTGCTGAGTGAATCTACTGATACATTTTGGCAATCAGATGGCCCACAACCACATTGTGTTAATATCCAATTTCCCCGAAAAATGATTCTTTCAAAATTATGTTTATACACTGATTATAAAGTTGATGAAAGTTATACACCTAGTAGGTTGGCCATACGAGTTGGGAATACTATACACGATCTTATCGAACTTCTAGAGGTCGAACTACAGGAACCTACTGGGTGGTCAGTGATTCCACTAAACTGGCCTGATGGATCTCCGTTACGGACCTTCCTTTTACAGATTGCCATTTCAGCTAACCATCAGAATGGTCGCGACACACATCTGCGTGCCATCCGACTTCACAGTCCTGTGGAGTGTCGTGGCTTAGACACTTTAGCGCCTTTTGTGAGTCGCGAAGGTCGTGCTTTTATGACTATTCGTTAGTTTTTACTGTTTCTTCTATCGCTTACTTATAATTAAGTTATGTTGTCAACTGCACTTCAAATCATTTGTAATCATAGGTTATTAGTTATACCTAGTTACTTTGGTTAATTTTGTGGTTTCGGCTGTCATATTTGTGCACTTCACTGTATTGGTTTACAGTAGATTATTTGTTG-ATATCTTATATTTGATGAAGATTT-ACCACATTGGTTTAT-ACTA-TTAACCATTATGGTCAAGT-ATT-AATAATTTCTTCCACCTTTCATTTCTAAAAAAAAAAAAAATAAAAA]

[+] EMBL AI977161             [CGACTGCCTCAACTACTAGTCCCTCACATCCTGCTTCATGTATGCTTAAAGATGAGGATTCGAGTGCTAGCAAACAGTCTTCTAGTTTTTTTATGAGGCAAAACAAACGTCCTGCTCTTGAAGGTTTGTCTCCTTCTAGTCCACTGCCCCGTAAATGTCGTCATTCATCTGGAAGTGATTCTGTAGTCGGAGCTATTACAACGAGATCTAAATAAAAATTTATGAATGCCTTTTAAGCTTAAAGCCATATCCAATTTCGATGTGACAAAAGATGAACGCGATGGAAAGGTTCGCGATGTATGTGATCATGCTGTTTGGAGCCTTTCTTCATGTAAACCAGGTCATGGTATCGACCAATTGCTGAGTGAATCTACTGATACATTTTGGCAATCAGATGGCCCACAACCACATTGTGTTAATATCCAATTTCCCCGAAAAATGATTCTTTCAAAATTATGTTTATACACTGATTATAAAGTTGATGAAAGTTATACACCTAGTAGGTTGGCCATACGAGTTGGGAATACTATACACGATCTTATCGAACTTCTAGAGGTCGAACTACAAGAACCTACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD080052             [                                                                                                                                                                                                                                                                                     GCGATGGAAAGGTTCGCGATGTATGTGATCATGCTGTTTGGAGCCTTTCTTCATGTAAACCAGGTCATGGTATCGACCAATTGCTGAGTGAATCTACTGATACATTTTGGCAATCAGATGGCCCACAACCACATTGTGTTAATATCCAATTTCCCCGAAAAATGATTCTTTCAAAATTATGTTTATACACTGATTATAAAGTTGATGAAAGTTATACACCTAGTAGGTTGGCCATACGAGTTGGGAATACTATACACGATCTTATCGAACTTCTAGAGGTCGAACTACAGGAACCTACTGGGTGGTCAGTGATTCCACTAAACTGGCCTGATGGATCTCCGTTACGGACCTTCCTTTTACAGATTGCCATTTCAGCTAACCATCAGAATGGTCGCGACACACATCTGCGTGCCATCCGACTTCACAGTCCTGTGGAGTGTCGTGGCTTAAACACTTTAGCGCCTTTTGTGAGTCGCGAAGGTCGTGCTTTTATGACTATTCGTTAGTTTTTACTGTTTCTTCTATCGCTTACTTATAATTAAGTTATGTTGTCAACTGCACTTCAAATCATTTGTAATCATAGGTTATTAGTTATACCTAGTTACTTTGGTTAATTNTGTGGTTTCGGCTGTCATATTTGTGCACTTCACTGTATTGGTTTACAGTAGATTATTTGTTG ATATCTTATATTTGATGAAGATTT ACCACATTGGTTTAT ACTA TTAACCATTATGGTCAAGT ATT AATAATTc                                      ]
[+] EMBL CD097332             [                                                                                                                                                                                                                                                                                                                                                                                                                           TGTGTTAATATCCAATTTCCCCGAAAAATGATTCTTTCAAAATTATGTTTATACACTGATTATAAAGTTGATGAAAGTTATACACCTAGTAGGTTGGCCATACGAGTTGGGAATACTATACACGATCTTATCGAACTTCTAGAGGTCGAACTACAGGAACCTACTGGGTGGTCAGTGATTCCACTAAACTGGCCTGATGGATCTCCGTTACGGACCTTCCTTTTACAGATTGCCATTTCAGCTAACCATCAGAATGGTCGCGACACACATCTGCGTGCCATCCGACTTCACAGTCCTGTGGAGTGTCGTGGCTTAGACACTTTAGCGCCTTTTGTGAGTCGCGAAGGTCGTGCTTTTATGACTATTCGTTAGTTTTTACTGTTTCTTCTATCGCTTACTTATAATTAAGTTATGTTGTCAACTGCACTTCAAATCATTTGTAATCATAGGTTATTAGTTATACCTAGTTACTTTGGTTAATTTTGTGGTTTCGGCTGTCATATTTGTGC                                                                                                                                                         ]
[-] EMBL AI394836             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           aTACTGGGTGGTCATTGATTCCACTAAACTGGCATGATGGATCTCCGTTACGGACTTTCCTTTTACAGATTGCCATTTCAGCTAACCATCAGAATTGTCGGGACACACATCTGCGTGCCATCCGACTTCACAGTCCTGTGGAGTGTCGTGGCTTAGACACTTTAGCGCCTTTTGTGAGTCGCGAAGGTCGTGCTTTTATGACTATTCGTTAGTTTTTACTGTTTCTTCTATCGCTTACTTATAATTAAGTTATGTTGTCAACTGCACTTCAAATCATTTGTAATCATAGGTTATTAGTTATACCTAGTTACTTTGGTTAATTTTGTGGTTTCGGCTGTCATATTTGTGCACTTCACTGTATTGGTTTACAGTAGATTATTTGTTGAATATCTTATATTTGATGAAGATTTAACCACATTGGTTTATAACTATTTAACCATTATGGTCAAGTAATTAAATAATTTCTTCCACCTTTCATTTCTAAAAAAAAAAAAAATAAAAA]
[-] EMBL AI394999             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TAGCGCCTNTTGTGAGTCGCGAAGGTCGTGCTTTTATGACTATTCGTTAGTTTTTACTGTTTCTTCTATCGCTTACTTATAATTAAGTTATGTTGTCAACTGCACTTCAAATCATTTGTAATCATAGGTTATTAGTTATACCTAGTTACTTTGGTTAATTTTGTGGTTTCGGCTGTCATATTTGTGCACTTCACTGTATTGGTTTACAGTAGATTATTTGTTGAATATCTTATATTTGATGAAGATTTAACCACATTGGTTTATAACTATTTAACCATTATGGTCAAGTAATTAAATAATTTCTTCCAaaaa                            ]


>consensus_9694#0 CGACTGCCTCAACTACTAGTCCCTCACATCCTGCTTCATGTATGCTTAAAGATGAGGATT CGAGTGCTAGCAAACAGTCTTCTAGTTTTTTTATGAGGCAAAACAAACGTCCTGCTCTTG AAGGTTTGTCTCCTTCTAGTCCACTGCCCCGTAAATGTCGTCATTCATCTGGAAGTGATT CTGTAGTCGGAGCTATTACAACGAGATCTAAATAAAAATTTATGAATGCCTTTTAAGCTT AAAGCCATATCCAATTTCGATGTGACAAAAGATGAACGCGATGGAAAGGTTCGCGATGTA TGTGATCATGCTGTTTGGAGCCTTTCTTCATGTAAACCAGGTCATGGTATCGACCAATTG CTGAGTGAATCTACTGATACATTTTGGCAATCAGATGGCCCACAACCACATTGTGTTAAT ATCCAATTTCCCCGAAAAATGATTCTTTCAAAATTATGTTTATACACTGATTATAAAGTT GATGAAAGTTATACACCTAGTAGGTTGGCCATACGAGTTGGGAATACTATACACGATCTT ATCGAACTTCTAGAGGTCGAACTACAGGAACCTACTGGGTGGTCAGTGATTCCACTAAAC TGGCCTGATGGATCTCCGTTACGGACCTTCCTTTTACAGATTGCCATTTCAGCTAACCAT CAGAATGGTCGCGACACACATCTGCGTGCCATCCGACTTCACAGTCCTGTGGAGTGTCGT GGCTTAGACACTTTAGCGCCTTTTGTGAGTCGCGAAGGTCGTGCTTTTATGACTATTCGT TAGTTTTTACTGTTTCTTCTATCGCTTACTTATAATTAAGTTATGTTGTCAACTGCACTT CAAATCATTTGTAATCATAGGTTATTAGTTATACCTAGTTACTTTGGTTAATTTTGTGGT TTCGGCTGTCATATTTGTGCACTTCACTGTATTGGTTTACAGTAGATTATTTGTTGATAT CTTATATTTGATGAAGATTTACCACATTGGTTTATACTATTAACCATTATGGTCAAGTAT TAATAATTTCTTCCACCTTTCATTTCTAAAAAAAAAAAAAATAAAAA



consensusID : consensus_9694#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 817
fasta sequence
                              [CTCTGGTACGAGGGCTCCCTCAATGTCTACCAATCTCAATAATGATGTACTTACAGATGCATCTCAGTCATCAGTTTATGTGGCTCGACGATGGAGAAGATCTCTTTTATCAGCACTTTCTACAGTGTACAGCCATCGTCACGCTTATGTATTTATGCATCCTGTAACTGAAGATATAGCTCCCGGGTACAGTACTGTTGTTTATGAGCCAGTGGACTTAACGTCTCTTAGGCGCCGTATGGAATCCTCACTCAGTTACTTGATTAGTTCTCAGCAGCCTTCCGCTTTAAATCCATCTGTTTCTTCTTATCGAGTTATCATCGAGATCGCAAGGCGTTTCATTCGTGATCTTTTGCTAATGTTTATGAATGCAAGAATGTACAATAGTCAAAATCACGAAGTCCATCGAATGGCTGGGGAGATGTATCATGATGTCATTGGTGAACTTCAACCTCTTTGGTCTATTATGGCTGAGGACATTCCAGGATTCCCATCTTTGCCTTTCTTAAATTTACCTCCTCCACAGACTACGCGATCCTTACAGCAACCTACTTTAGTGTCGACTGCCTCAACTACTAGTCCCTCACATCCTGCTTCATGTATGCTTAAAGATGAGGATTCGAGTGCTAGCAAACAGTCTTCTAGTTNTTTTATGAGGC-AAACAAACGTNCTGCTCTTGAA-GTTNGTCTNCTTCTAGT-CACTGCCCCGT-AATGTCGTCA-TCATCTGG-AGTGA-TNTGTAGTC-GAGCTA-TAC-ACGAGA-CTAAAT-AAG-TATTGCG-TGTT-ATGGCA-TTTGTATCT-AAGTATTAAAG-TA-TGTAAAA-ATAATA]

[+] EMBL CD082257             [CTCTGGTACGAGGGCTCCCTCAATGTCTACCAATCTCAATAATGATGTACTTACAGATGCATCTCAGTCATCAGTTTATGTGGCTCGACGATGGAGAAGATCTCTTTTATCAGCACTTTCTACAGTGTACAGCCATCGTCACGCTTATGTATTTATGCATCCTGTAACTGAAGATATAGCTCCCGGGTACAGTACTGTTGTTTATGAGCCAGTGGACTTAACGTCTCTTAGGCGCCGTATGGAATCCTCACTCAGTTACTTGATTAGTTCTCAGCAGCCTTCCGCTTTAAATCCATCTGTTTCTTCTTATCGAGTTATCATCGAGATCGCAAGGCGTTTCATTCGTGATCTTTTGCTAATGTTTATGAATGCAAGAATGTACAATAGTCAAAATCACGAAGTCCATCGAATGGCTGGGGAGATGTATCATGATGTCATTGGTGAACTTCAACCTCTTTGGTCTATTATGGCTGAGGACATTCCAGGATTCCCATCTTTGCCTTTCTTAAATTTACCTCCTCCACAGACTACGCGATCCTTACAGCAACCTACTTTAGTGTCGACTGCCTCAACTACTAGTCCCTCACATCCTGCTTCATGTATGCTTAAAGATGAGGATTCGAGTGCTAGCAAACAGTCTTCTAGTTNTTTTATGAGGC AAACAAACGTNCTGCTCTTGAA GTTNGTCTNCTTCTAGT CACTGCCCCGT AATGTCGTCA TCATCTGG AGTGA TNTGTAGTC GAGCTA TAC ACGAGA CTAAAT AAG TATTGCG TGTT ATGGCA TTTGTATCT AAGTATTAAAG TA TGTAAAA ATA   ]
[+] EMBL CD064056             [                                                                                             GAGAAGATCTCTTTTATCAGCACTTTCTACAGTGTACAGCCATCGTCAAGCTTATGTATTTATGCATCCTGTAACTGAAGATATAGCTCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD075864             [                                                                                                                                                                                                                                                                           TTCTCAGCAGCCTTCCGCTTTAAATCCATCTGTTTCTTCTTATCGAGTTATCATCGAGATCGCAAGGCGTTTCATTCGTGATCTTTTGCTAATGTTTATGAATGCAAGAATGTACAATAGTCAAAATCACGAAGTCCATCGAATGGCTGGGGAGATGTATCATGATGTCATTGGTGAACTTCAACCTCTTTGGTCTATTATGGCTGAGGACATTCCAGGATTCCCATCTTTGCCTTTCTTAAATTTACCTCCTCCACAGACTACGCGATCCTTACAGCAACCTACTTTAGTGTCGACTGCCTCAACTACTAGTCCCTCACATCCTGCTTCATGTATGCTTAAAGATGAGGATTCGAGTGCTAGCAAACAGTCTTCTAGTTTTTTTATGAGGCAAAACAAACGTCCTGCTCTTGAAGGTTTGTCTCCTTCTAGTCCACTGCCCCGTAAATGTCGTCATTCATCTGGAAGTGATTCTGTAGTCGGAGCTATTACAACGAGATCTAAATAAAGTTATTGCGTTGTTAATGTCATTTTGTATCTAAAGTATTAAAGTTATTGTAAAATATAATA]


>consensus_9694#1 CTCTGGTACGAGGGCTCCCTCAATGTCTACCAATCTCAATAATGATGTACTTACAGATGC ATCTCAGTCATCAGTTTATGTGGCTCGACGATGGAGAAGATCTCTTTTATCAGCACTTTC TACAGTGTACAGCCATCGTCACGCTTATGTATTTATGCATCCTGTAACTGAAGATATAGC TCCCGGGTACAGTACTGTTGTTTATGAGCCAGTGGACTTAACGTCTCTTAGGCGCCGTAT GGAATCCTCACTCAGTTACTTGATTAGTTCTCAGCAGCCTTCCGCTTTAAATCCATCTGT TTCTTCTTATCGAGTTATCATCGAGATCGCAAGGCGTTTCATTCGTGATCTTTTGCTAAT GTTTATGAATGCAAGAATGTACAATAGTCAAAATCACGAAGTCCATCGAATGGCTGGGGA GATGTATCATGATGTCATTGGTGAACTTCAACCTCTTTGGTCTATTATGGCTGAGGACAT TCCAGGATTCCCATCTTTGCCTTTCTTAAATTTACCTCCTCCACAGACTACGCGATCCTT ACAGCAACCTACTTTAGTGTCGACTGCCTCAACTACTAGTCCCTCACATCCTGCTTCATG TATGCTTAAAGATGAGGATTCGAGTGCTAGCAAACAGTCTTCTAGTTNTTTTATGAGGCA AACAAACGTNCTGCTCTTGAAGTTNGTCTNCTTCTAGTCACTGCCCCGTAATGTCGTCAT CATCTGGAGTGATNTGTAGTCGAGCTATACACGAGACTAAATAAGTATTGCGTGTTATGG CATTTGTATCTAAGTATTAAAGTATGTAAAAATAATA



consensusID : consensus_9694#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 470
fasta sequence
                              [GCTTTTATGACTATTCGTTAGTTTTAACTGTTTCTTCAATCGCTTACTTATAATTAAGTTATGTTGTCAATTGCACTTCAAATCATTTGTAACCATAGGTTATTAGTTATACCTAGTTACTTTGGATAATTTTGTGGTTTCGGCTGTCATATTTGTGCACTTCACTGAATTGGTTTACAGTAGATTATTTGGTGAATATCTTATATTTGATGAAGATTTAACCACATTGGTTTATAACTATTTAACCATTATGGTCAAGTAATTAAATAATTTATTCCACCTTTCATTTTTAAAAGTTCAATTTTTTAATCTTGGTGTCATTTAACAGTATATGACAAATATCACCCAGCACTTTCACGCCGAAATTATTTCATATGTGCGTAGAATTAAGAGTATATTAATTTCATATACGAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA]

[-] EMBL AW017096             [GCTTTTATGACTATTCGTTAGTTTTAACTGTTTCTTCAATCGCTTACTTATAATTAAGTTATGTTGTCAATTGCACTTCAAATCATTTGTAACCATAGGTTATTAGTTATACCTAGTTACTTTGGATAATTTTGTGGTTTCGGCTGTCATATTTGTGCACTTCACTGAATTGGTTTACAGTAGATTATTTGGTGAATATCTTATATTTGATGAAGATTTAACCACATTGGTTTATAACTATTTAACCATTATGGTCAAGTAATTAAATAATTTATTCCACCTTTCATTTTTAAAAGTTCAATTTTTTAATCTTGGTGTCATTTAACAGTATATGACAAATATCACCCAGCACTTTCACGCCGAAATTATTTCATATGTGCGTAGAATTAAGAGTATATTAATTTCATATACGAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA]


>consensus_9694#2 GCTTTTATGACTATTCGTTAGTTTTAACTGTTTCTTCAATCGCTTACTTATAATTAAGTT ATGTTGTCAATTGCACTTCAAATCATTTGTAACCATAGGTTATTAGTTATACCTAGTTAC TTTGGATAATTTTGTGGTTTCGGCTGTCATATTTGTGCACTTCACTGAATTGGTTTACAG TAGATTATTTGGTGAATATCTTATATTTGATGAAGATTTAACCACATTGGTTTATAACTA TTTAACCATTATGGTCAAGTAATTAAATAATTTATTCCACCTTTCATTTTTAAAAGTTCA ATTTTTTAATCTTGGTGTCATTTAACAGTATATGACAAATATCACCCAGCACTTTCACGC CGAAATTATTTCATATGTGCGTAGAATTAAGAGTATATTAATTTCATATACGAAAAAAAA AAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA



consensusID : consensus_9694#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 345
fasta sequence
                              [CTACAGGAACTTACTGGGTGGTCAGTGATTCCACTAAACTGGCCTGATGGATCTCCGTTACGGACTTTCCTTTTACAGATTGCCATTTCAGCTAACCATCAGAATGGTCGCGACACACATCTGCGTGCCATCCGACTTCACAGTCCTGTGGAGTGTCGTGGCTTAGACACTTTAGCGCCTTTTGTGAGTCGCGAAGGTCGTGCTTTTATGACTATTCGTTAGTTTTTACTGTTTCTTCTATCGCTTACTTATAATTAAGTTATGTTGTCAACTGCACTTCAAATCATTTGTAATCATAGGTTATTAGTTATACCTAGTTACTTTGGTTAAAAAAAAAAAAAAAAA]

[-] EMBL AI395680             [CTACAGGAACTTACTGGGTGGTCAGTGATTCCACTAAACTGGCCTGATGGATCTCCGTTACGGACTTTCCTTTTACAGATTGCCATTTCAGCTAACCATCAGAATGGTCGCGACACACATCTGCGTGCCATCCGACTTCACAGTCCTGTGGAGTGTCGTGGCTTAGACACTTTAGCGCCTTTTGTGAGTCGCGAAGGTCGTGCTTTTATGACTATTCGTTAGTTTTTACTGTTTCTTCTATCGCTTACTTATAATTAAGTTATGTTGTCAACTGCACTTCAAATCATTTGTAATCATAGGTTATTAGTTATACCTAGTTACTTTGGTTAAAAAAAAAAAAAAAAA]


>consensus_9694#3 CTACAGGAACTTACTGGGTGGTCAGTGATTCCACTAAACTGGCCTGATGGATCTCCGTTA CGGACTTTCCTTTTACAGATTGCCATTTCAGCTAACCATCAGAATGGTCGCGACACACAT CTGCGTGCCATCCGACTTCACAGTCCTGTGGAGTGTCGTGGCTTAGACACTTTAGCGCCT TTTGTGAGTCGCGAAGGTCGTGCTTTTATGACTATTCGTTAGTTTTTACTGTTTCTTCTA TCGCTTACTTATAATTAAGTTATGTTGTCAACTGCACTTCAAATCATTTGTAATCATAGG TTATTAGTTATACCTAGTTACTTTGGTTAAAAAAAAAAAAAAAAA



consensusID : consensus_9694#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 317
fasta sequence
                              [TTTTTTTTTTTTTTTTGAAAGTTCCAAAACCTGTACAATGCATCAAAGAAAGATCAACTCATTAACTAATAAAAGACCCAGTTTCGTAGATGAAATTAATATACTCTTAATTCTACGCACATATGAGATAATTTCGGCGTGAAAGTGCTGGGTGATATTTGTCATATACTGTTAAATGAGACGAAGATTAAAAAATTGAACTTTTAGAAATGAAAGGTGGAAGAAATTATTTAATTACTTGACCATAATGGGTAAATAGTTATAAACCAATGTGGTTAAATCTTCATCAAATATAAGATATTCAACAAATAATCTAC]

[+] EMBL AI394969             [TTTTTTTTTTTTTTTTGAAAGTTCCAAAACCTGTACAATGCATCAAAGAAAGATCAACTCATTAACTAATAAAAGACCCAGTTTCGTAGATGAAATTAATATACTCTTAATTCTACGCACATATGAGATAATTTCGGCGTGAAAGTGCTGGGTGATATTTGTCATATACTGTTAAATGAGACGAAGATTAAAAAATTGAACTTTTAGAAATGAAAGGTGGAAGAAATTATTTAATTACTTGACCATAATGGGTAAATAGTTATAAACCAATGTGGTTAAATCTTCATCAAATATAAGATATTCAACAAATAATCTAC]


>consensus_9694#4 TTTTTTTTTTTTTTTTGAAAGTTCCAAAACCTGTACAATGCATCAAAGAAAGATCAACTC ATTAACTAATAAAAGACCCAGTTTCGTAGATGAAATTAATATACTCTTAATTCTACGCAC ATATGAGATAATTTCGGCGTGAAAGTGCTGGGTGATATTTGTCATATACTGTTAAATGAG ACGAAGATTAAAAAATTGAACTTTTAGAAATGAAAGGTGGAAGAAATTATTTAATTACTT GACCATAATGGGTAAATAGTTATAAACCAATGTGGTTAAATCTTCATCAAATATAAGATA TTCAACAAATAATCTAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9694#0      CGACTGCCTCAACTACTAGTCCCTCACATCCTGCTTCATGTATGCTTAAAGATGAGGATT 60
consensus_9694#3      ------------------------------------------------------------
consensus_9694#2      ------------------------------------------------------------
consensus_9694#4      ------------------------------------------------------------
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      CGAGTGCTAGCAAACAGTCTTCTAGTTTTTTTATGAGGCAAAACAAACGTCCTGCTCTTG 120
consensus_9694#3      ------------------------------------------------------------
consensus_9694#2      ------------------------------------------------------------
consensus_9694#4      ------------------------------------------------------------
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      AAGGTTTGTCTCCTTCTAGTCCACTGCCCCGTAAATGTCGTCATTCATCTGGAAGTGATT 180
consensus_9694#3      ------------------------------------------------------------
consensus_9694#2      ------------------------------------------------------------
consensus_9694#4      ------------------------------------------------------------
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      CTGTAGTCGGAGCTATTACAACGAGATCTAAATAAAAATTTATGAATGCCTTTTAAGCTT 240
consensus_9694#3      ------------------------------------------------------------
consensus_9694#2      ------------------------------------------------------------
consensus_9694#4      ------------------------------------------------------------
consensus_9694#1      --------------------------------------------------CTCTGGTACG 10
                                                                                  

consensus_9694#0      AAAGCCATATCCAATTTCGATGTGACAAAAGATGAACGCGATGGAAAGGTTCGCGATGTA 300
consensus_9694#3      ------------------------------------------------------------
consensus_9694#2      ------------------------------------------------------------
consensus_9694#4      ------------------------------------------------------------
consensus_9694#1      AGGGCTCCCTCAATGTCTACCAATCTCAATAATGATGTACTTACAGATGCATCTCAGTCA 70
                                                                                  

consensus_9694#0      TGTGATCATGCTGTTTGGAGCCTTTCTTCATGTAAACCAGGTCATGGTATCGACCAATTG 360
consensus_9694#3      ------------------------------------------------------------
consensus_9694#2      ------------------------------------------------------------
consensus_9694#4      ------------------------------------------------------------
consensus_9694#1      TCAGTTTATGTGGCTCGACGATGGAGAAGATCTCTTTTATCAGCACTTTCTACAGTGTAC 130
                                                                                  

consensus_9694#0      CTGAGTGAATCTACTGATACATTTTGGCAATCAGATGGCCCACAACCACATTGTGTTAAT 420
consensus_9694#3      ------------------------------------------------------------
consensus_9694#2      ------------------------------------------------------------
consensus_9694#4      ------------------------------------------------------------
consensus_9694#1      AGCCATCGTCACGCTTATGTATTTATGCATCCTGTAACTGAAGATATAGCTCCCGGGTAC 190
                                                                                  

consensus_9694#0      ATCCAATTTCCCCGAAAAATGATTCTTTCAAAATTATGTTTATACACTGATTATAAAGTT 480
consensus_9694#3      ------------------------------------------------------------
consensus_9694#2      ------------------------------------------------------------
consensus_9694#4      ------------------------------------------------------------
consensus_9694#1      AGTACTGTTGTTTATGAGCCAGTGGACTTAACGTCTCTTAGGCGCCGTATGGAATCCTCA 250
                                                                                  

consensus_9694#0      GATGAAAGTTATACACCTAGTAGGTTGGCCATACGAGTTGGGAATACTATACACGATCTT 540
consensus_9694#3      ------------------------------------------------------------
consensus_9694#2      ------GCTTTTATGACTATTCGTTAGTTTTAACTGTTTCTTCAATCGCTTACTTATAAT 54
consensus_9694#4      ------------------------------------------------------------
consensus_9694#1      CTCAGTTACTTGATTAGTTCTCAGCAGCCTTCCGCTTTAAATCCATCTGTTTCTTCTTAT 310
                                                                                  

consensus_9694#0      ATCGAACTTCTAGAGGTCGAACTACAGGAACCTACTGGGT---GGTCAGTGATTCCACTA 597
consensus_9694#3      ---------------------CTACAGGAACTTACTGGGT---GGTCAGTGATTCCACTA 36
consensus_9694#2      TAAGTTATGTTGTCAATTGCACTTCAAATCATTTGTAACCATAGGTTATTAGTTATACCT 114
consensus_9694#4      ---------------------TTTTTTTTTTTTTTTTGAA---AGTTCCAAAACCTGTAC 36
consensus_9694#1      CGAGTTATCATCGAGATCGCAAGGCGTTTCATTCGTGATCTTTTGCTAATGTTTATGAAT 370
                                                      *  *        *               

consensus_9694#0      A-ACTGGCCTG-ATGGATCTCCGTTACGGACCTTC---CTTTTACAGATTGCCATTTCAG 652
consensus_9694#3      A-ACTGGCCTG-ATGGATCTCCGTTACGGACTTTC---CTTTTACAGATTGCCATTTCAG 91
consensus_9694#2      A-GTTACTTTGGATAATTTTGTGGTTTCGGCTGTCATATTTGTGCACTTCACTGAATTGG 173
consensus_9694#4      A-ATGCATCAAAGAAAGATCAACTCATTAACTAATA-AAAGACCCAGTTTCGTAGATGAA 94
consensus_9694#1      GCAAGAATGTACAATAGTCAAAATCACGAAGTCCA----TCGAATGGCTGGGGAGAT-GT 425
                                                                      *       *   

consensus_9694#0      CTAACCATCAGAATGGTCGCGACACACATCTGCGTGCCATCCGACTTCACAGTCCTGTGG 712
consensus_9694#3      CTAACCATCAGAATGGTCGCGACACACATCTGCGTGCCATCCGACTTCACAGTCCTGTGG 151
consensus_9694#2      TTTAC-AGTAGATTATTTGGTGAATAT-CTTATATTTGATGAAGATTTA-ACCACATTGG 230
consensus_9694#4      ATTAATATACTCTTAATT-CTACGCACATATGAGATAATTTCGGCGTGAAAGTGC--TGG 151
consensus_9694#1      ATCATGATGTCATTGGTGAACTTCAACCTCTTTGGTCTATTATGGCTGAGGACATTCCAG 485
                       * *  *      *  *        *    *        *      * *          *

consensus_9694#0      AGTGTCGTGGCTTAGACACTTTAG-CGCCTTTTGTGAGTCGCGAAGGTCGTGCTTTTATG 771
consensus_9694#3      AGTGTCGTGGCTTAGACACTTTAG-CGCCTTTTGTGAGTCGCGAAGGTCGTGCTTTTATG 210
consensus_9694#2      TTTATAACTATTTAACCATTATGG-TCAAGTAATTAAATAATTTATTCCAC-CTTTCATT 288
consensus_9694#4      GTGATATTTG-TCATATACTGTTA-AATGAGACGAAGATTAAAAAATTGAA-CTTTTAGA 208
consensus_9694#1      GATTCCCATCTTTGCCTTTCTTAAATTTACCTCCTCCACAGACTACGCGATCCTTACAGC 545
                                 *         *                      *       ***  *  

consensus_9694#0      ACTATTCGTTAGTTTTTACTGTTTCTTCTATCGCTTACTTATAATTAAG---TTATGTTG 828
consensus_9694#3      ACTATTCGTTAGTTTTTACTGTTTCTTCTATCGCTTACTTATAATTAAG---TTATGTTG 267
consensus_9694#2      TTTAAAAGTTCAATTTT-TTAATCTTGGTGTCATTTAACAGTATATGAC---AAATATCA 344
consensus_9694#4      AATGAAAGGTGGAAGAAATTATTT----AATTACTTGACCATAATGGGT---AAATAGTT 261
consensus_9694#1      AACCTACTTTAGTGTCGACTGCCTCAACTACTAGTCCCTCACATCCTGCTTCATGTATGC 605
                               *         *              *       *            *    

consensus_9694#0      TCAA----CTGCACTTC-AAATCATTTGTAAT---CATAGGTTATTAGTTATACCTAGTT 880
consensus_9694#3      TCAA----CTGCACTTC-AAATCATTTGTAAT---CATAGGTTATTAGTTATACCTAGTT 319
consensus_9694#2      CCCAGCACTTTCACGCCGAAATTATTTCATATGTGCGTAGAATTAAGAGTATATTAATTT 404
consensus_9694#4      ATAA--ACCAATGTGGTTAAATCTTCATCAAA---TATAAGATATTCAACAAAT-AATCT 315
consensus_9694#1      TTAAAGATGAGGATTCGAGTGCTAGCAAACAGTCTTCTAGTTNTTTTATGAGGCAAACAA 665
                         *                          *      **           *     *   

consensus_9694#0      ACTTTGGTTAATTTTGTGGTTTCGGCTGTCATATTTGTGCACTTCACTGTATTGGTTTAC 940
consensus_9694#3      ACTTTGGTTAAAAAAAAAAAAAAAAA---------------------------------- 345
consensus_9694#2      CATATACGAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTAC 464
consensus_9694#4      AC---------------------------------------------------------- 317
consensus_9694#1      ACGTNCTGCTCTTGAAGTTNGTCTNCTTCTAGTCACTGCCCCGTAATGTCGTCATCATCT 725
                                                                                  

consensus_9694#0      AGTAGATTATTTGTTGATATCTTATATTTGATGAAGATTTACCACATTGGTTTATACTAT 1000
consensus_9694#3      ------------------------------------------------------------
consensus_9694#2      TGCGTA------------------------------------------------------ 470
consensus_9694#4      ------------------------------------------------------------
consensus_9694#1      GGAGTGATNTGTAGTCGAGCTATACACGAGACTAAATAAGTATTGCGTGTTATGGCATTT 785
                                                                                  

consensus_9694#0      TAACCATTATGGTCAAGTATTAATAATTTCTTCCACCTTTCATTTCTAAAAAAAAAAAAA 1060
consensus_9694#3      ------------------------------------------------------------
consensus_9694#2      ------------------------------------------------------------
consensus_9694#4      ------------------------------------------------------------
consensus_9694#1      GTATCTAAGTATTAAAGTATGTAAAAATAATA---------------------------- 817
                                                                                  

consensus_9694#0      ATAAAAA 1067
consensus_9694#3      -------
consensus_9694#2      -------
consensus_9694#4      -------
consensus_9694#1      -------
                             




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)