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Schistosoma mansoni
cluster # 9702 cluster # 9702       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9702#0 length = 1163 sequences # 3  
consensus_9702#1 length = 1110 sequences # 3  
consensus_9702#2 length = 633 sequences # 5  

consensusID : consensus_9702#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1163
fasta sequence
                              [GGAGCCAGTATTCGGCACGAGGTAATTGAACGTGTACGACCGAGATCAGATAATTTTGTGATTCCGTTAATAATTGAATTTCAACCAACCATTAGACGAATGAAACGAATTAGAGAATTATTAGAAAAGAATGGTACATTAGTAGTACCAAGTGAGAATCCTGATTGGCGGATACGATATACAAATTTAATGAATAGTTTTACAGAAAACAATGGAACACTCATTAAATTAGCTGAAAATGTTTTCGATGCTGGATTTACACGTCAAATTGATCATTTACTCGGGAGAAGACATATGCATTCACGTATCTATTTCGGCTATGAAAAACCGATTGCATCACCACAGAAATTTATTGACTAAAACGGAAACGAAACACCAAATATTTATATATAAAAATTCCATTACAGATCCCGATGAATATATCAATCGTATAATAATCCTTATCCAATAAGATATAAACAACTTTATTCTCATATACCTGTTTGCCTTTCACAATCTATTCACATTTTTTGTATAATCGACTACATCCTCTCCACTGTATCATGCTTATTCCTAATTGTTGTCGTGTATAAAATTAATCTAACTAAAAGAGAACAGCACTCAATTTACTTTATTTGCATAAAGAAAAAGACAGAATACTCCATAGCACTATCAAATCAAAAGCCTAGATAATGGCAGGGACTTTAATAATGATAAATAATACAAGACTGTAAAGAAAAAGAAATTTTTTAATTATTTAGATATATACTGCTTATATGTATATATCATCCTCCTGTTTATACATTGTACACACTTTATAGCANATGTGCATATTACTTATAAACTAGCAAGTAGTTTATTTCTTATACATAAAATTATTNTTTACATANCANNATACATCATACACACTCATTCCATAAACACATATATACAGATATAATTGAGTATGTATGTGAAAAAAAGACACAGGAAAAAGACATGTCTTTCGTTATTTCATTAAAATGAATTTTTTGTTCGGAAATATTTAANTCATCGAGAATTGCATCATATCATATCGNCTCCTATGATTATATATTATATACTATATCCCGGCCTATATCTCTTGGAGCATGTCCTTTTATCTAATGCTGATGGGTTCGATTTTAAATGATNAACTGCTGTANGTTTCTTATCGATTCGATAAC]

[+] EMBL CD081587             [GGAGCCAGTATTCGGCACGAGGTAATTGAACGTGTACGACCGAGATCAGATAATTTTGTGATTCCGTTAATAATTGAATTTCAACCAACCATTAGACGAATGAAACGAATTAGAGAATTATTAGAAAAGAATGGTACATTAGTAGTACCAAGTGAGAATCCTGATTGGCGGATACGATATACAAATTTAATGAATAGTTTTACAGAAAACAATGGAACACTCATTAAATTAGCTGAAAATGTTTTCGATGCTGGATTTACACGTCAAATTGATCATTTACTCGGGAGAAGACATATGCATTCACGTATCTATTTCGGCTATGAAAAACCGATTGCATCACCACAGAAATTTATTGACTAAAACGGAAACGAAACACCAAATATTTATATATAAAAATTCCATTACAGATCCCGATGAATATATCAATCGTATAATAATCCTTATCCAATAAGATATAAACAACTTTATTCTCATATACCTGTTTGCCTTTCACAATCTATTCACATTTTTTGTATAATCGACTACATCCTCTCCACTGTATCATGCTTATTCCTAATTGTTGTCGTGTATAAAATTAATCTAACTAAAAGAGAACAGCACTCAATTTACTTTATTTGCATAAAGAAAAAGACAGTATACTCCATAGCACTATCAAATCAAAAGCCTAGATAATGGCAGGGACTTTAATAATGATAAATAATACAAGACTGTAAAGAAAAAGAAATTTTTTAATTATTTAGATATATACTGCTTATATGTATATATCATCCTCCTGTTTATACATTGTACACACTTTATAGCANATGTGCATATTACTTATAAACTAGCAAGTAGTTTATTTCTTATACATAAAATTATTNTTTACATANCANNATACATCATACACACTCATTCCATAAACACATATATACAGATATAATTGAGTATGTATGTGAAAAAAAGACACAGGAAAAAGACATGTCTTTCGTTATTTCATTAAAATGAATTTTTTGTTCGGAAATATTTAANTCATCGAGAATTGCATCATATCATATCGNCTCCTATGATTATATATTATATACTATATCCCGGCCTATATCTCTTGGAGCATGTCCTTTTATCTAATGCTGATGGGTTCGATTTTAAATGATNAACTGCTGTANGTTTCTTATCGATTCGATAAC]
[-] EMBL CD072983             [                                                                                                                                                                        CGGATACGATATACAAATTTAATGAATAGTTTTACAGAAAACAATGGAACACTCATTAAATTAGCTGAAAATGTTTTCGATGCTGGATTTACACGTCAAATTGATCATTTACTCGGGAGAAGACATATGCATTCACGTATCTATTTCGGCTATGAAAAACCGATTGCATCACCACAGAAATTTATTGACTAAAACGGAAACGAAACACCAAATATTTATATATAAAAATTCCATTACAGATCCCGATGAATATATCAATCGTATAATAATCCTTATCCAATAAGATATAAACAACTTTATTTTCATATACCTGTTTGCCTTTCACAATCTATTCACATTTTTTGTATAATCGACTACATCCTCTCCACTGTATCATGCTTATTCCTAATTGTTGTCGTGTATAAAATTAATCTAACTAAAAGAGAACAGCACTCAATTTACTTTATTTGCATAAAGAAAAAGACAGAATACTCCATAGCACTATCAAATCAAAAGCCTAGATAATGGCAGGGACTTTAATAATGATAAATAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD195209             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTTTTTGTATAATCGACTACATCCTCTCCACTGTATCATGCTTATTCCTAATTGTTGTCGTGTATAAAATTAATCTAACTAAAAGAGAACAGCACTCAATTTACTTTATTTGCATAAAGAAAAAGACAGAATACTCCATAGCACTATCAAATCAAAAGCCTAGATAATGGCAGGGACTTTAATAATGATAAATAATACAAGACTGTAAAGAAAAAGAAATTTTTTAATTATTTAGATATATACTGCTTATATGTATATATCATCCTCCTGTTTATACATTGTACACACTTTATAGCAAATGTGCATATTACTTATAAACTAGCAAGTAGTTTATTTCTTATACATAAAATTATTTTTTACATAACAaataa                                                                                                                                                                                                                                                                                               ]


>consensus_9702#0 GGAGCCAGTATTCGGCACGAGGTAATTGAACGTGTACGACCGAGATCAGATAATTTTGTG ATTCCGTTAATAATTGAATTTCAACCAACCATTAGACGAATGAAACGAATTAGAGAATTA TTAGAAAAGAATGGTACATTAGTAGTACCAAGTGAGAATCCTGATTGGCGGATACGATAT ACAAATTTAATGAATAGTTTTACAGAAAACAATGGAACACTCATTAAATTAGCTGAAAAT GTTTTCGATGCTGGATTTACACGTCAAATTGATCATTTACTCGGGAGAAGACATATGCAT TCACGTATCTATTTCGGCTATGAAAAACCGATTGCATCACCACAGAAATTTATTGACTAA AACGGAAACGAAACACCAAATATTTATATATAAAAATTCCATTACAGATCCCGATGAATA TATCAATCGTATAATAATCCTTATCCAATAAGATATAAACAACTTTATTCTCATATACCT GTTTGCCTTTCACAATCTATTCACATTTTTTGTATAATCGACTACATCCTCTCCACTGTA TCATGCTTATTCCTAATTGTTGTCGTGTATAAAATTAATCTAACTAAAAGAGAACAGCAC TCAATTTACTTTATTTGCATAAAGAAAAAGACAGAATACTCCATAGCACTATCAAATCAA AAGCCTAGATAATGGCAGGGACTTTAATAATGATAAATAATACAAGACTGTAAAGAAAAA GAAATTTTTTAATTATTTAGATATATACTGCTTATATGTATATATCATCCTCCTGTTTAT ACATTGTACACACTTTATAGCANATGTGCATATTACTTATAAACTAGCAAGTAGTTTATT TCTTATACATAAAATTATTNTTTACATANCANNATACATCATACACACTCATTCCATAAA CACATATATACAGATATAATTGAGTATGTATGTGAAAAAAAGACACAGGAAAAAGACATG TCTTTCGTTATTTCATTAAAATGAATTTTTTGTTCGGAAATATTTAANTCATCGAGAATT GCATCATATCATATCGNCTCCTATGATTATATATTATATACTATATCCCGGCCTATATCT CTTGGAGCATGTCCTTTTATCTAATGCTGATGGGTTCGATTTTAAATGATNAACTGCTGT ANGTTTCTTATCGATTCGATAAC



consensusID : consensus_9702#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1110
fasta sequence
                              [TTATTTGCATAAAGAAAAAGACAGTATACTCCATAGCACTATCAAATCAAAAGCCTAGATAATGGCAGGGACTTTAATAATGATAAATAATACAAGCCTGTAAAGAAAAAGAAATTTTTTAATTATTTAGATATATACTGCTTATATGTATATATCATCCTCCTGTTTATACATTGTACACACTTTATAGCAAATGTGCATATTACTTATAAACTAGCAAGTAGTTTATTTCTTATACATAAAATTATTTTTTACATAACAAATAACATCATACACACTCATTCCATAAACACATATATACAGATATAATTGAGTATGTATGTGAAAAAAAGAACACAGGAAAAGACAATGTCTTTCGTTATTTCATTTAAATTGTATTTTTTGTTCGGAAATTATTTAATTCATCGGAGATATTGTCATCATCATCATCATCGTCATCACTATGATTATTATTATTATTATTACTATAATCACCGCCACTATCATCTTCTGTGTAGCATTGTTCCTTTTTTATCTTAATGTCTGTATGGTTTTCGGATTTTTTAAATTGATTTATACTGTCTGTTAGTTTTTTCTTTAATCGCATTTCGTATAAATCTTTTTCATTTTCTAACTGTTTGATTTTTTCCCATTTCATTCTAAATATGGTAGAAATTCCAAAAAAAAAACAATGAGATCAAAAAATATTGAATAACTAGTAGATGTTGAAAAGTTGTGAGTTCAAAGAAATTTCACTCATGAATCTGTTTATCTGAATAAGCAGACGAAAATAAGAAAAGAAAATAGTGGATTAATTTCGGAACCAATATAAATGATAAACTATTGACCTTTTCACGGTCAATCAATTATAAACAACCTTGGGCAGCATTTAATTTGTCAGACTAGATCAATANGTACAGAAAACAAATAGTATTAATGATGGTGAGAATTAAACACACATGGATACAATCGCGGAATAGTCAGTATGGAATAGAATTAATACTTGAAGGGAGATTAAAAAAAAGTGAATGTGTATATGATCTTGTGACCGATTTTGAACTACGTAGGCCTTCTAGCATAGAGCACGGACTATAGGTTGAATTTCAACCTGCGTGCCGAATTAATGGCTCG]

[-] EMBL CD075411             [TTATTTGCATAAAGAAAAAGACAGTATACTCCATAGCACTATCAAATCAAAAGCCTAGATAATGGCAGGGACTTTAATAATGATAAATAATACAAGCCTGTAAAGAAAAAGAAATTTTTTAATTATTTAGATATATACTGCTTATATGTATATATCATCCTCCTGTTTATACATTGTACACACTTTATAGCAAATGTGCATATTACTTATAAACTAGCAAGTAGTTTATTTCTTATACATAAAATTATTTTTTACATAACAAATAACATCATACACACTCATTCCATAAACACATATATACAGATATAATTGAGTATGTATGTGAAAAAAAGAACACAGGAAAAGACAATGTCTTTCGTTATTTCATTTAAATTGTATTTTTTGTTCGGAAATTATTTAATTCATCGGAGATATTGTCATCATCATCATCATCGTCATCACTATGATTATTATTATTATTATTACTATAATCACCGCCACTATCATCTTCTGTGTAGCATTGTTCCTTTTTTATCTTAATGTCTGTATGGTTTTCGGATTTTTTAAATTGATTTATACTGTCTGTTAGTTTTTTCTTTAATCGCATTTCGTATAAATCTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD075471             [                                                                                                                                                                                                                                                                                                                                                                                                                                                         TATGATTATTATTATTATTATTACTATAATCACCGCCACTATCATCTTCTGTGTAGCATTGTTCCTTTTTTATCTTAATGTCTGTATGGTTTTCGGATTTTTTAAATTGATTTATACTGGCTGTTAGTTTTTTCTTTAATCGCATTTCGTATAAATCTTTTTCATTTTCTAACTGTTTGATTTTTTCCCATTTCATTCTAAATATGGTAGAAATTCCAAAAAAAAAACAATGAGATCAAAAAATATTGAATAACTAGTAGATGTTGAAAAGTTGTGAGTTCAAAGAAATTTCACTCATGAATCTGTTTATCTGAATAAGCAGACGAAAATAAGAAAAGAAAATAGTGGATTAATTTCGGAACCAATATAAATGATAAACTATTGACCTTTTCACGGTCAATCAATTATAAACAACCTTGGGCAGCATTTAATTTGTCAGACTAGATCAATANGTACAGAAAACAAATAGT                                                                                                                                                                                                       ]
[-] EMBL CD081737             [                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATGATTATTATTATTATTATTACTATAATCACCGCCACTATCATCTTCTGTGTAGCATTGTTCCTTTTTTATCTTAATGTCTGTATGGTTTTCGGATTTTTTAAATTGATTTATACTGTCTGTTAGTTTTTTCTTTAATCGCATTTCGTATAAATCTTTTTCATTTTCTAACTGTTTGATTTTTTCCCATTTCATTCTAAATATGGTAGAAATTCCAAAAAAAAAACAATGAGATCAAAAAATATTGAATAACTAGTAGATGTTGAAAAGTTGTGAGTTCAAAGAAATTTCACTCATGAATCTGTTTATCTGAATAAGCAGACGAAAATAAGAAAAGAAAATAGTGGATTAATTTCGGAACCAATATAAATGATAAACTATTGACCTTTTCACGGTCAATCAATTATAAACAACCTTGGGCAGCATTTAATTTGTCAGACTAGATCAATAAGTACAGAAAACAAATAGTATTAATGATGGTGAGAATTAAACACACATGGATACAATCGCGGAATAGTCAGTATGGAATAGAATTAATACTTGAAGGGAGATTAAAAAAAAGTGAATGTGTATATGATCTTGTGACCGATTTTGAACTACGTAGGCCTTCTAGCATAGAGCACGGACTATAGGTTGAATTTCAACCTGCGTGCCGAATTAATGGCTCG]


>consensus_9702#1 TTATTTGCATAAAGAAAAAGACAGTATACTCCATAGCACTATCAAATCAAAAGCCTAGAT AATGGCAGGGACTTTAATAATGATAAATAATACAAGCCTGTAAAGAAAAAGAAATTTTTT AATTATTTAGATATATACTGCTTATATGTATATATCATCCTCCTGTTTATACATTGTACA CACTTTATAGCAAATGTGCATATTACTTATAAACTAGCAAGTAGTTTATTTCTTATACAT AAAATTATTTTTTACATAACAAATAACATCATACACACTCATTCCATAAACACATATATA CAGATATAATTGAGTATGTATGTGAAAAAAAGAACACAGGAAAAGACAATGTCTTTCGTT ATTTCATTTAAATTGTATTTTTTGTTCGGAAATTATTTAATTCATCGGAGATATTGTCAT CATCATCATCATCGTCATCACTATGATTATTATTATTATTATTACTATAATCACCGCCAC TATCATCTTCTGTGTAGCATTGTTCCTTTTTTATCTTAATGTCTGTATGGTTTTCGGATT TTTTAAATTGATTTATACTGTCTGTTAGTTTTTTCTTTAATCGCATTTCGTATAAATCTT TTTCATTTTCTAACTGTTTGATTTTTTCCCATTTCATTCTAAATATGGTAGAAATTCCAA AAAAAAAACAATGAGATCAAAAAATATTGAATAACTAGTAGATGTTGAAAAGTTGTGAGT TCAAAGAAATTTCACTCATGAATCTGTTTATCTGAATAAGCAGACGAAAATAAGAAAAGA AAATAGTGGATTAATTTCGGAACCAATATAAATGATAAACTATTGACCTTTTCACGGTCA ATCAATTATAAACAACCTTGGGCAGCATTTAATTTGTCAGACTAGATCAATANGTACAGA AAACAAATAGTATTAATGATGGTGAGAATTAAACACACATGGATACAATCGCGGAATAGT CAGTATGGAATAGAATTAATACTTGAAGGGAGATTAAAAAAAAGTGAATGTGTATATGAT CTTGTGACCGATTTTGAACTACGTAGGCCTTCTAGCATAGAGCACGGACTATAGGTTGAA TTTCAACCTGCGTGCCGAATTAATGGCTCG



consensusID : consensus_9702#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 633
fasta sequence
                              [TAACTTTAATATAAAACTTAACTTATTTTTTTTATAAAAAAAACTATAGTGTTTACATTTGTGTATTTTATTTCTTTGCTTGTTACTAAGTGCTATCTCCACNACACCCCCTTCCTGAAAAAAAAAAGAAAATCATATTTTGAAAGTAAACATTCATT-GTACAAATACGTGAATAACAATAATGTACGATCAAACTGAAGTGGAATTCCTTGTTAATTTAATTATTAGTACACAAAAATCAGAAAAATCATTTTCTCCTTATGAATATGACGATGATTTATTAAATACTACTTCACAATTTCCTACAGCATCTACAACACTCCCACCATCTGTACCATCTATAAAATCATTTTTAAATTATCGTCCCCGTCAAAAAATTCTTATTTGTGGATTACCA-GATGATATATCCCCTTGTTTAGACTATGCAATGATAGCGAAAACCT-GGAATGATT-GACTACTCATCTCTAATTATTGCCAG-TACTGATATTGAATGAATTAATTGTTAATTATTTTGGGAAAAATTAAAATTCATCTGGTCCATTGGGGATGAAACCCGAC-ATGAAGAAATGCTAATTGAACGTGTACGACCGAGATCAGATAATTNTGTGATTCCGTTAATAATTGAATTTCAAC]

[+] EMBL CD072689             [TAACTTTAATATAAAACTTAACTTATTTTTTTTATAAAAAAAACTATAGTGTTTACATTTGTGTATTTTATTTCTTTGCTTGTTACTAAGTGCTATCTCCACGACACCCCCTTCCTG AAAAAAAAAGAAAATCATATTTTGAAAGTAAACATTCATT GTACAAATACGTGAATAACAATGATGTACGATCAAACTGAAGTGGAATTCCTTGTTAATTTAATTATTAGTACACAAAAATCAGAAAAATCATTTTCTCCTTATGAATATGACGATGATTTATTAAATACTACTTCACAATTTCCTACAGCAT                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AI110891             [                      TTATTTTTTTTATAAAAAAAACTATAGTGTTTACATTTGTGTATTTTATTTCTTTGCTTGTTACTAAGTGCTATCTCCACNACACCCCCTTCCTGAAAAAAAAAAGAAAATCATATTTTGAAAGTAAACATTCATTGGTACAAATACGTGAATAACAATAATGTNCGATCAAACTGAAGTGGAATTCCTTGTTAATTTAATTATTAGTACACAAAAATCAGAAAAATCATTTTCTCCTTATGAATATGACNANGATTTATTAAATACTACTTCNCAATTTCCTACAGCNTCTACAACACTCCCACCATCTGTNCCATCTATAAAATCATTTTTAAATTATCGTCCCCGTCAAAAAATTCTTATTTGTGGATTACCANAATGATATATCCCCTTGTTTAGACTATGCAATGATAGCGAAAACCT GGAATGATT GACTACTCATCTCTAATTATTGCCAG TACTGATATTGAATGAATTAATTGTTAATTATTTTGGGAAAAATTAAAATTCATCTGGTCCATTGGGGATGAAACCCGAC                                                                            ]
[+] EMBL AI111042             [                      TTATTTTTTTTATAAAAAAAACTATAGTGTTTACATTTGTGTATTTTATTTCTTTGCTTGTTACTAAGTGCTATCTCCACNACACCCCCTTCCTGAAAAAAAAAAGAAAATCATATTTTGAAAGTAAACATTCATT GTACAAATACGTGAATAACAATAATGTACGATCAAACTGAAGTGGAATTCCTTGTTAATTTAATTATTAGTACACAAAAATCAGAAAAATCATTTTCTCCTTATGAATATGACNATGATTTATTAAATACTACTTCACAATTTCCTACAGCATCTACAACACTCCCACCATCTGTACCATCTATAAAATCATTTTTAAATTATCGTCCCCGTCAAAAAATTCTTATTTGTGGATTACCA GATGATATATCCCCTTGTTTAGACTATGCAATGATAGCGAAAACCTGGGAATGATTGGACTACTCATCTCTAATTATTGCCAGTTACT                                                                                                                                                        ]
[+] EMBL AI111031             [                      TTATTTTTTTTATAAAAAAAACTATAGTGTTTACATTTGTGTATTTTATTTCTTTGCTTGTTACTAAGTGCTATCTCCACNACACCCCCTTCCTGAAAAAAAAAAGAAAATCATATTTTGAAAGTAAACATTCATT GTACAAATACNTGAATAACAATAATGTACGATCAAACTGAAGTGGAATTCCTTGTTAATTTAATTATTAGTACACAAAAATCANAAAAATCATTTTCTCCTTATGAATATGACGATGATTTATTAAATACTACTTCACAATTTCCTACAGCATCTACAACACTCCCACCATCTGTACCATCTATAAAATCNTTTTTAAATTATCGTC                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD078514             [                                                                                                                                             GAAAGTAAACATTCATT GTACAAATACGTGAATAACAATAATGTACGATCAAACTGAAGTGGAATTCCTTGTTAATTTAATTATTAGTACACAAAAATCAGAAAAATCATTTTCTCCTTATGAATATGACGATGATTTATTAAATACTACTTCACAATTTCCTACAGCATCTACAACACTCCCACCATCTGTACCATCTATAAAATCATTTTTAAATTATCGTCCCCGTCAAAAAATTCTTATTTGTGGATTACCA GATGATATATCCCCTTGTTTAGACTATGCAATGATAGCG AAACCT GGAATGATT GACTACTCATCTCTAATTATTGCCAG TACTGATATTG ATGAATTAATTGTAAATTATTTT GGAAAAATTAAAATTCATCTTGTCAATT GGGATGAAA CAGACTATGAAGAAATGCTAATTGAACGTGTACGACCGAGATCAGATAATTNTGTGATTCCGTTAATAATTGAATTTCAAC]


>consensus_9702#2 TAACTTTAATATAAAACTTAACTTATTTTTTTTATAAAAAAAACTATAGTGTTTACATTT GTGTATTTTATTTCTTTGCTTGTTACTAAGTGCTATCTCCACNACACCCCCTTCCTGAAA AAAAAAAGAAAATCATATTTTGAAAGTAAACATTCATTGTACAAATACGTGAATAACAAT AATGTACGATCAAACTGAAGTGGAATTCCTTGTTAATTTAATTATTAGTACACAAAAATC AGAAAAATCATTTTCTCCTTATGAATATGACGATGATTTATTAAATACTACTTCACAATT TCCTACAGCATCTACAACACTCCCACCATCTGTACCATCTATAAAATCATTTTTAAATTA TCGTCCCCGTCAAAAAATTCTTATTTGTGGATTACCAGATGATATATCCCCTTGTTTAGA CTATGCAATGATAGCGAAAACCTGGAATGATTGACTACTCATCTCTAATTATTGCCAGTA CTGATATTGAATGAATTAATTGTTAATTATTTTGGGAAAAATTAAAATTCATCTGGTCCA TTGGGGATGAAACCCGACATGAAGAAATGCTAATTGAACGTGTACGACCGAGATCAGATA ATTNTGTGATTCCGTTAATAATTGAATTTCAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9702#0      GGAGCCAGTATTCGGCACGAGGTAATTGAACGTGTACGACCGAGATCAGATAATTTTGTG 60
consensus_9702#1      -------TTATTTG-CATAAAGAAAAAGACAGTATACTCCATAGCACTATCAAATCAAAA 52
consensus_9702#2      ------------------------------------------------------------
                                                                                  

consensus_9702#0      ATTCCGTTAATAATTGA-ATTTCAAC-----CAACCATTAGACGAATGAAACGAATTAGA 114
consensus_9702#1      GCCTAGATAATGGCAGGGACTTTAATAATGATAAATAATACAAGCCTGTAAAGAAAAAGA 112
consensus_9702#2      -------------------------------------TAACTTTAATATAAAACTTAACT 23
                                                             *      *  **      *  

consensus_9702#0      GAATTATTAGAAAAGAATG-GTACATTAGTAGTACCAAGTGAGAATCCTGATTGGCGGAT 173
consensus_9702#1      AATTTTTTAATTATTTAGATATATACTGCTTATATGTATATATCATCCTCCTGTTTATAC 172
consensus_9702#2      TATTTTTTTTATAAAAAAAACTATAGTGTTTACATTTGTGTATTTTATTTCTTTGCTTGT 83
                       * ** **    *   *    ** * *  *   *       *   *  *  *        

consensus_9702#0      -ACGATATACAAATT-TAATGAATAGTTTTACAGAAAACAATGGAACACTCATTAAATTA 231
consensus_9702#1      -ATTGTACACACTTTATAGCAAATGTGCATATTACTTATAAACTAGCAAGTAGTTTATTT 231
consensus_9702#2      TACTAAGTGCTATCTCCACNACACCCCCTTCCTGAAAAAAAAAAGAAAATCA---TATTT 140
                       *       *    *  *    *      *       * **      *   *    *** 

consensus_9702#0      GCTGAAAATGTTTTCGATGCTGGATTT-ACACGTCAAA-T--TGATCATTTACTCGGGAG 287
consensus_9702#1      CTTATACATAAAATTATTTTTTACATA-ACAAATAACA-TCATACACACTCATTCCATA- 288
consensus_9702#2      TGAAAGTAAACATTCATTGTACAAATACGTGAATAACAATAATGTACGATCAAACTGAAG 200
                             *     *   *       *       * * * *  *   *  * *  *   * 

consensus_9702#0      AAGACATATGCATTCACGTATCT-ATTTCGGCTATGAAAAACCGATTGCATCACCACAGA 346
consensus_9702#1      AACACATATATACAGATATAATTGAGTATGTATGTGAAAAAAAGAACACAGGAAAAGACA 348
consensus_9702#2      TGGAATTCCTTGTTAATTTAATT--ATTAGTACACAAAAATCAGA-------AAAATCAT 251
                         *  *        *  **  *   *  *      ****   **       *  *    

consensus_9702#0      AATTTATTGACTAAAACGGAAACGAAACACCAAATATTTATATATAAAA-ATTCCATTAC 405
consensus_9702#1      ATGTCTTTCGTTATTTCATTTAAATTGTATTTTTTGTTCGGAAATTATTTAATTCATCGG 408
consensus_9702#2      TTTCTCCTTATGAATATGACGATGATTTATTAAATACTACTTCACAATTTCCTACAGCAT 311
                             *    *        *      *     *  *     *  *     * **    

consensus_9702#0      AGATCCCG--ATGAATATATCAATCGT----ATAATAATCCTTA--TC--CAATAAGA-T 454
consensus_9702#1      AGATATTGTCATCATCATCATCATCGTCATCACTATGATTATTA--TTATTATTATTACT 466
consensus_9702#2      CTACAACACTCCCACCATCTGTACCATCTATAAAATCATTTTTAAATTATCGTCCCCGTC 371
                        *          *  **    * * *    *  ** **  ***  *             

consensus_9702#0      ATAAACAACTTTATTCTCATATACCTGTTTGCCTTTCACAATCTAT-TCACATTTTTTGT 513
consensus_9702#1      ATAATCACCGCCACTATCATCTTCTGTGTAGCATTGTTCCTTTTTTATCTTAATGTCTGT 526
consensus_9702#2      AAAAAATTCTTATTTGTGGATTACCAGATGATATATCCCCTTGTTT---AGACTATGCA- 427
                      * **    *     * *    * *    *    *    *  * * *     * * *    

consensus_9702#0      ATAATCGACTACATCCTCTCCACTGTATCATGCTTATTCCTAATTGTTGTCGTGTATAAA 573
consensus_9702#1      ATGGTTT-TCGGATTTTTTAAATTGATTTATACTGTCTGTTAGTTTTTTCTTTAATCGCA 585
consensus_9702#2      ATGATAG--CGAAAACCTGGAATGATTGACTACTCATCTCTAATTATTGCCAGTACTGAT 485
                      **  *       *        *        * **      ** ** **            

consensus_9702#0      ATTAATCTAACTAAAAGAGAACAGCACTCAATTTACTTTATTTGCATAAAGAAAAAGACA 633
consensus_9702#1      TTTCGTATAAATCTTTTTCATTTTCTAACTGTTTGATTTTTTCCCATT-----TCATTCT 640
consensus_9702#2      ATTGAATGAATTAATTGTTAATTATTTTGGGAAAAATTAAAATTCATC----------TG 535
                       **     ** *       *                **      ***             

consensus_9702#0      GAATACTCCATAGCACTATCAAATCAAAAGCCTAGATAATGGCAGGGACTTTAATAATGA 693
consensus_9702#1      AAATAT--GGTAGAAATTCCAAAAAAAAAACAATGAGATCAAAAAATATTGAATAACTAG 698
consensus_9702#2      GTCCATTGGGGATGAAACCCGACATGAAGA-AATGCTAATTGAACGTGTACGACCGAGAT 594
                          *      *  *    * *    **      *  *     *        *       

consensus_9702#0      TAAATA-ATACAAGACTGTAAAGAAAAAGAAATTTTTTAATTATTTAGATATATACTGCT 752
consensus_9702#1      TAGATG-TTGAAAAGTTGTGAGTTCAAAGAAATTTC--ACTCATGAATCTGTTTA-TCTG 754
consensus_9702#2      CAGATAATTNTGTGATTCCGTTAATAATTGAATTTC--AAC------------------- 633
                       * **   *       *        **   *****   *                     

consensus_9702#0      TATATGTATATATCATCCTCCTGTTTATACATTGTACACACTTTATAGCANATGTGCAT- 811
consensus_9702#1      AATAAGCAGACGAAAATAAGAAAAGAAAATAGTGGATTAATTTCGGAACCAATATAAATG 814
consensus_9702#2      ------------------------------------------------------------
                                                                                  

consensus_9702#0      ATTACTTATAAACTAGCAAGTAGTTTATTTCTTATACATAAAATTATTNTTTACATANCA 871
consensus_9702#1      ATAAACTATTGACCTTTTCACGGTCAATCAATTATAAACAA-------CCTTGGGCAGCA 867
consensus_9702#2      ------------------------------------------------------------
                                                                                  

consensus_9702#0      NNATACATCATACACACTCATTCCATAAACACATATATACAGATATAATTGAGTATGTAT 931
consensus_9702#1      TT-TAATTTGT-CAGACTAGATCAATANGTACAGAAA-ACAAATAGTATTAATGATG-GT 923
consensus_9702#2      ------------------------------------------------------------
                                                                                  

consensus_9702#0      GTGAAAAAAAGACACAGGAAAAAGACATGTCTTTCGTTATTTCATTAAAATGAATTTTTT 991
consensus_9702#1      GAGAATTAAACACACATGGATACAATCGCGGAATAGTCAGT---ATGGAATAGAATTAAT 980
consensus_9702#2      ------------------------------------------------------------
                                                                                  

consensus_9702#0      GTTCGGAAATATTTAANTCATCGAGAATTGCATCATATCATATCGNCTCCTATGATTATA 1051
consensus_9702#1      ACTTGAAGGGA----GATTAAAAAAAAGTGAATG----TGTATATGATCTTGTGACCG-- 1030
consensus_9702#2      ------------------------------------------------------------
                                                                                  

consensus_9702#0      TATTATATACTATATCCCGGCCTATATCTCTTGGAGCATGTCCTTTTATCTAATGCTGAT 1111
consensus_9702#1      -ATTTTGAACTACGT--AGGCCT-TCTAGCATAGAGCACGGACTATAGGTTGAATTTCA- 1085
consensus_9702#2      ------------------------------------------------------------
                                                                                  

consensus_9702#0      GGGTTCGATTTTAAATGATNAACTGCTGTANGTTTCTTATCGATTCGATAAC 1163
consensus_9702#1      ACCTGCGTGCCGAATTAATGGCTCG--------------------------- 1110
consensus_9702#2      ----------------------------------------------------
                                                                          




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)