cluster # 9704

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Schistosoma mansoni
cluster # 9704 cluster # 9704 Sequences # 11 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9704#0 length = 1113 sequences # 1
consensus_9704#1 length = 922 sequences # 3
consensus_9704#2 length = 510 sequences # 4

consensus_9704#3 length = 496 sequences # 1
consensus_9704#4 length = 485 sequences # 1
consensus_9704#5 length = 287 sequences # 1

consensusID : consensus_9704#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1113
fasta sequence

                              [AGGCCATTAATTCGGCACCAGGCGAGAGTGTTGTGTGACTCTTGCTTCGTTTTATCTCGCTACTGATACTCACTCTTCCTGAAACTTCGAAAGTGTCTCAATTCCTTGAATTCGGGATCTCATCCAGACCAATTTTTTGGCAACCACTTACCTGCTATTCCATTCCCACCCTTTCTTAAAGCGAACCATTTGACGCTCGAGTCATGGGCTTCTTCCACTTAGCAAACTGCCTGGCGTTGGCTACGGGTCCTCATTTGCTGGTATACAAGTCTACTGGAATACCAGATAATGATGCATTTTGGCCCTGTTTCAAAATTGCATGCGTGTACGCACTTACACAGATCTTGAAGTTTTTCCTGGTCACTTTAGCTCCTCATAACTATTTGTCTAAGGGAGATTCTGTGACATTTGATGTTTTCGGTATAGTACTAGAGATAATAGTAATCACTATGATTGTACGTGGATCACTTTGCAGAAGTGAGTTCAATGTAGTAGCATCCAGTGTAGGCTGGTCAATCGCTTCATTAGTAACCACAAGATATGTCCCAATTTGGGTTGGTACGCGTGGACTAGAATTCGACTGGAAATACTTGTGTTTGAGTTACGAAGCAAACTTGGATTTGATTGATACATTTGTAATGTCGTACTCTATTTGGCTATTATCACGTCGCTCAGGCCCTACGTGGAGCACTCTACTGGGCCTTCTCACCGTTATTGCGGGGCCAGCTAGAAGCATATTTTATGCATTATTGTCCCATAAAATTGAGAACATCTTTGTTACCCTCGCGATANAAACAATCATTTGTATTATCTTCGGAATTACAACTATGATNAATACGATCACAAGGCATACTGACCGAACTGAAGCACCNGAAATCGCAGGGATATTCACCATTATTCGCTTGGTATATCAGNTGACAACGGGACGATACATATGTGCGTACAAAAGTCGAGACTCAAAATCAGCTCATCAGTGTTTCTCAAAACGTAAAATGAAAGTTTGTTTCAAACGTTTGCTACAACAAAGTCTTCCCTGCGCAACTACATNAAGAAATGATATCTAGCGTATTATACGACTTGAAACAGAATGTGTTCAATGCTAGTTCTTAATAA]

[+] EMBL CD081785             [AGGCCATTAATTCGGCACCAGGCGAGAGTGTTGTGTGACTCTTGCTTCGTTTTATCTCGCTACTGATACTCACTCTTCCTGAAACTTCGAAAGTGTCTCAATTCCTTGAATTCGGGATCTCATCCAGACCAATTTTTTGGCAACCACTTACCTGCTATTCCATTCCCACCCTTTCTTAAAGCGAACCATTTGACGCTCGAGTCATGGGCTTCTTCCACTTAGCAAACTGCCTGGCGTTGGCTACGGGTCCTCATTTGCTGGTATACAAGTCTACTGGAATACCAGATAATGATGCATTTTGGCCCTGTTTCAAAATTGCATGCGTGTACGCACTTACACAGATCTTGAAGTTTTTCCTGGTCACTTTAGCTCCTCATAACTATTTGTCTAAGGGAGATTCTGTGACATTTGATGTTTTCGGTATAGTACTAGAGATAATAGTAATCACTATGATTGTACGTGGATCACTTTGCAGAAGTGAGTTCAATGTAGTAGCATCCAGTGTAGGCTGGTCAATCGCTTCATTAGTAACCACAAGATATGTCCCAATTTGGGTTGGTACGCGTGGACTAGAATTCGACTGGAAATACTTGTGTTTGAGTTACGAAGCAAACTTGGATTTGATTGATACATTTGTAATGTCGTACTCTATTTGGCTATTATCACGTCGCTCAGGCCCTACGTGGAGCACTCTACTGGGCCTTCTCACCGTTATTGCGGGGCCAGCTAGAAGCATATTTTATGCATTATTGTCCCATAAAATTGAGAACATCTTTGTTACCCTCGCGATANAAACAATCATTTGTATTATCTTCGGAATTACAACTATGATNAATACGATCACAAGGCATACTGACCGAACTGAAGCACCNGAAATCGCAGGGATATTCACCATTATTCGCTTGGTATATCAGNTGACAACGGGACGATACATATGTGCGTACAAAAGTCGAGACTCAAAATCAGCTCATCAGTGTTTCTCAAAACGTAAAATGAAAGTTTGTTTCAAACGTTTGCTACAACAAAGTCTTCCCTGCGCAACTACATNAAGAAATGATATCTAGCGTATTATACGACTTGAAACAGAATGTGTTCAATGCTAGTTCTTAATAA]




>consensus_9704#0
AGGCCATTAATTCGGCACCAGGCGAGAGTGTTGTGTGACTCTTGCTTCGTTTTATCTCGC
TACTGATACTCACTCTTCCTGAAACTTCGAAAGTGTCTCAATTCCTTGAATTCGGGATCT
CATCCAGACCAATTTTTTGGCAACCACTTACCTGCTATTCCATTCCCACCCTTTCTTAAA
GCGAACCATTTGACGCTCGAGTCATGGGCTTCTTCCACTTAGCAAACTGCCTGGCGTTGG
CTACGGGTCCTCATTTGCTGGTATACAAGTCTACTGGAATACCAGATAATGATGCATTTT
GGCCCTGTTTCAAAATTGCATGCGTGTACGCACTTACACAGATCTTGAAGTTTTTCCTGG
TCACTTTAGCTCCTCATAACTATTTGTCTAAGGGAGATTCTGTGACATTTGATGTTTTCG
GTATAGTACTAGAGATAATAGTAATCACTATGATTGTACGTGGATCACTTTGCAGAAGTG
AGTTCAATGTAGTAGCATCCAGTGTAGGCTGGTCAATCGCTTCATTAGTAACCACAAGAT
ATGTCCCAATTTGGGTTGGTACGCGTGGACTAGAATTCGACTGGAAATACTTGTGTTTGA
GTTACGAAGCAAACTTGGATTTGATTGATACATTTGTAATGTCGTACTCTATTTGGCTAT
TATCACGTCGCTCAGGCCCTACGTGGAGCACTCTACTGGGCCTTCTCACCGTTATTGCGG
GGCCAGCTAGAAGCATATTTTATGCATTATTGTCCCATAAAATTGAGAACATCTTTGTTA
CCCTCGCGATANAAACAATCATTTGTATTATCTTCGGAATTACAACTATGATNAATACGA
TCACAAGGCATACTGACCGAACTGAAGCACCNGAAATCGCAGGGATATTCACCATTATTC
GCTTGGTATATCAGNTGACAACGGGACGATACATATGTGCGTACAAAAGTCGAGACTCAA
AATCAGCTCATCAGTGTTTCTCAAAACGTAAAATGAAAGTTTGTTTCAAACGTTTGCTAC
AACAAAGTCTTCCCTGCGCAACTACATNAAGAAATGATATCTAGCGTATTATACGACTTG
AAACAGAATGTGTTCAATGCTAGTTCTTAATAA

consensusID : consensus_9704#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 922
fasta sequence

                              [TCTCCCCGTTATTGCGGGGCCAGCTAGAAGCATATTTTATGCATTATTGTCCCATAAAATTGAGAACATCTTTGTTACCCTCGCGATAAAACCAATCATTTGTATTATTTTCGGAATTCCAACTATGATAATACGATCCCAAAGGCATACTGCCCGAATTAAAGCACGGGAATCGCAAGGATTATTCCCCATTATTCGCTTGTTATATCAGTTGACAACGGGACGATACATATGTGGGTACAAAAGTCGAGACTCAAAATCCAGCTCATCAGTGTTTTTCAAAAACGTAAAATGAAAAGTTTGTTTCAAAACGTTTGTTTACAAACAAAGTTTTTCCATTGCGCACCCTACAATTAAGAAAATGATTATTCTAGCGTTATTTATACGTAC-T-TGAAAACAGAAAATGTGTTTCAAATGCTAGTTTCTTTAAAATAAATGCGATGTAATCCAAGGGTTTGGTTAACTGCTGTTAAATTAAATGCTCAAATGTATTTCATATGGCATAACTATAGCACAACATCCCAGTGATGATCAAGTGAATTTATCACCAGGTTAAGTAGCTGCATCAATAAGTTGGTTTATTTGAATTTTAGTGAGACAATTGCGAAACCGAGAAGTAGGTGAATAATTAGAAAGAAAGAACTAGGAATATGTTCATACAGAATCTGTTTATATACAACAAAGAAGCCAGGAAAATGTCCTCTAAATTAAACCATTTCTTAAATTAGACGATTTAAATTTATTACTATGTACAATAGTCTTCATTATTTCCTAATGTTTTATTATGGCTCATATTGACTCCGAAGATATCGGTTTTTGGTATGTTTTCCTTTGGATAGTACAGTGAGTGAAGCGCATTCAAATTAGCAGTATGATTGGCAATTTTACAAATGTATATGATGATCTGATCAAAAATTTCTAA]

[-] EMBL CD075516             [TCTCCCCGTTATTGCGGGGCCAGCTAGAAGCATATTTTATGCATTATTGTCCCATAAAATTGAGAACATCTTTGTTACCCTCGCGATAAAACCAATCATTTGTATTATTTTCGGAATTCCAACTATGATAATACGATCCCAAAGGCATACTGCCCGAATTAAAGCACGGGAATCGCAAGGATTATTCCCCATTATTCGCTTGTTATATCAGTTGACAACGGGACGATACATATGTGGGTACAAAAGTCGAGACTCAAAATCCAGCTCATCAGTGTTTTTCAAAAACGTAAAATGAAAAGTTTGTTTCAAAACGTTTGTTTACAAACAAAGTTTTTCCATTGCGCACCCTACAATTAAGAAAATGATTATTCTAGCGTTATTTATACGTAC T TGAAAACGGAAAATGTGTTTCAAATGCTAGTTTCTTTAAAATAAATGgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL BF936874             [                                                                                                                                                                                                                                                                                                                   AAAACGTTTGTTTACAAACAAAGTCTTTTCACTGCGCAACCTCCAATTAAGAAAATGATTATTCTAGCGTTATTTATACGTACTT TGAAAACAGAAAATGTGTTTCAAATGCTAGTTTCTTTAAAATTAATGCGATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD095348             [                                                                                                                                                                                                                                                                                                                                                                ATTAAGAAAATGATTATTCTAGCGTTATTTATACGTAC TCTGAAAACAGAAAATGTGTTTCAAATGCTAGTTTCTTTAAAATAAATGCGATGTAATCCAAGGGTTTGGTTAACTGCTGTTAAATTAAATGCTCAAATGTATTTCATATGGCATAACTATAGCACAACATCCCAGTGATGATCAAGTGAATTTATCACCAGGTTAAGTAGCTGCATCAATAAGTTGGTTTATTTGAATTTTAGTGAGACAATTGCGAAACCGAGAAGTAGGTGAATAATTAGAAAGAAAGAACTAGGAATATGTTCATACAGAATCTGTTTATATACAACAAAGAAGCCAGGAAAATGTCCTCTAAATTAAACCATTTCTTAAATTAGACGATTTAAATTTATTACTATGTACAATAGTCTTCATTATTTCCTAATGTTTTATTATGGCTCATATTGACTCCGAAGATATCGGTTTTTGGTATGTTTTCCTTTGGATAGTACAGTGAGTGAAGCGCATTCAAATTAGCAGTATGATTGGCAATTTTACAAATGTATATGATGATCTGATCAAAAATTTCTAA]




>consensus_9704#1
TCTCCCCGTTATTGCGGGGCCAGCTAGAAGCATATTTTATGCATTATTGTCCCATAAAAT
TGAGAACATCTTTGTTACCCTCGCGATAAAACCAATCATTTGTATTATTTTCGGAATTCC
AACTATGATAATACGATCCCAAAGGCATACTGCCCGAATTAAAGCACGGGAATCGCAAGG
ATTATTCCCCATTATTCGCTTGTTATATCAGTTGACAACGGGACGATACATATGTGGGTA
CAAAAGTCGAGACTCAAAATCCAGCTCATCAGTGTTTTTCAAAAACGTAAAATGAAAAGT
TTGTTTCAAAACGTTTGTTTACAAACAAAGTTTTTCCATTGCGCACCCTACAATTAAGAA
AATGATTATTCTAGCGTTATTTATACGTACTTGAAAACAGAAAATGTGTTTCAAATGCTA
GTTTCTTTAAAATAAATGCGATGTAATCCAAGGGTTTGGTTAACTGCTGTTAAATTAAAT
GCTCAAATGTATTTCATATGGCATAACTATAGCACAACATCCCAGTGATGATCAAGTGAA
TTTATCACCAGGTTAAGTAGCTGCATCAATAAGTTGGTTTATTTGAATTTTAGTGAGACA
ATTGCGAAACCGAGAAGTAGGTGAATAATTAGAAAGAAAGAACTAGGAATATGTTCATAC
AGAATCTGTTTATATACAACAAAGAAGCCAGGAAAATGTCCTCTAAATTAAACCATTTCT
TAAATTAGACGATTTAAATTTATTACTATGTACAATAGTCTTCATTATTTCCTAATGTTT
TATTATGGCTCATATTGACTCCGAAGATATCGGTTTTTGGTATGTTTTCCTTTGGATAGT
ACAGTGAGTGAAGCGCATTCAAATTAGCAGTATGATTGGCAATTTTACAAATGTATATGA
TGATCTGATCAAAAATTTCTAA

consensusID : consensus_9704#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 510
fasta sequence

                              [GCGTACAAAAGTCGAGACTCAAAATCCAGCTCATCAGTGTTTCTCAAAAACGTAAAATGAAAAGTTTGTTTCAAAACGTTTGTCTACAAACAAAGTCTTTCCACTGCGCAACAGGGACTGATAGATAGTGAGATATTTCCTTCTTCTTTTGATGATTGCCAGGTATTTGAGACATGAGTTCCTTCAAAGCGTTGATATTTCGCTTTTCCAAGCAGAGTTTAACTGCTTCATCTACC-ATATTTAACCGAATAACAATCTGTATAAGCTCTTCATCATCACTTATATATTTCAAGTAACTTTCAATAATG-TTTTTTGGGACATCTAATGAATTGAGATGAAGGATAAAACGGTCAGTTGGGATGGTAACCTCCATACGACGCGACAAAGATTTCTTATTTTAACATGATAAATTCCAGATCGTCCCAGTTTTGTGACTGAACAAGGGGCTCTATTAACAACCATCTAAACTGTTCGTCCGATATTTTGAACTTTTTCCCAAGAGTTTCAGCC]

[+] EMBL CD142603             [GCGTACAAAAGTCGAGACTCAAAATCCAGCTCATCAGTGTTTCTCAAAAACGTAAAATGAAAAGTTTGTTTCAAAACGTTTGTCTACAAACAAAGTCTTTCCACTGCGCAACAGGGACTGATAGATAGTGAGATATTTCCTTCTTCTTTTGATGATTGCTAGGTATTTGAGACATGAGTTCCTTCAAAGCGTTGATATTTCGCTTTACCAAGCAGAGTTTAACTGCTTCATCTACC ATATTTAACCGAATAACAATCCGTATAAGCTCTTCATCATCACTTATATATTTCAAGTAACTTTCAATAATGTTTTTTTGGGACACCTAATGAATTGAGA                                                                                                                                                                               ]
[+] EMBL CD142666             [GCGTACAAAAGTCGAGACTCAAAATCCAGCTCATCAGTGTTTCTCAAAAACGTAAAATGAAAAGTTTGTTTCAAAACGTTTGTCTACAAACAAAGTCTTTCCACTGCGCAACAGGGACTGATAGATAGTGAGATATTTCCTTCTTCTTTTGATGATTGCCAGGTATTTGAGACATGAGTTCCTTCANAGCGTTGATATTTCGCTTTTCC AGCAGAGTTTAACTGCTTCATCTACCNATA TTAACCGAATAACAATCTGTATAAGCTCTTCATCATCACTTATA                                                                                                                                                                                                                                   ]
[-] EMBL CD180383             [           TCGAGACTCAAAATCCAGCTCATCAGTGTTTCTCAAAAACGTAAAATGAAAAGTTTGTTTCAAAACGTTTGTCTACAAACAAAGTCTTTCCACTGCGCAACAGGGACTGATAGATAGTGAGATATTTCCTTCTTCTTTTGATGATTGCCAGGTATTTGAGACATGAGTTCCTTCAAAGCGTTGATATTTCGCTTTTCCAAGCAGAGTTTAACTGCTTCATCTACC ATATTTAACCGAATAACTATCTGTATAAGCTCTTCATCATCACTTATATATTTCAAGTAACTTTCAATAATG TTTTTTGGGACATCTAATGAATTGAGATGAAGGATAAAACGGTCAGTTGGGATGGTAACCTCCATACGACGCGACAAAGATTTCTTATTTTAACATGATA                                                                                                      ]
[-] EMBL CD138185             [                                                                                                                                                                                       TCAAAGCGTTGATATTTCGCTTTTCCAAGCAGAGTTTAACTGCTTCATCTACC ATATTTAACCGAATAACAATCTGTATAAGCTCTTCATCATCACTTATATATTTCAAGTAACTTTCAATAATG TTTTTTGGGACATCTAATGAATTGAGATGAAGGATAAAACGGTCAGTTGGGATGGTAACCTCCATACGACGCGACAAAGATTTCTT TTTTAACATGATAAATTCCAGATCGTCCCAGTTTTGTGACTGAACAAGGGGCTCTATTAACAACCATCTAAACTGTTCGTCCGATATTTTGAACTTTTTCCCAAGAGTTTCAGCC]




>consensus_9704#2
GCGTACAAAAGTCGAGACTCAAAATCCAGCTCATCAGTGTTTCTCAAAAACGTAAAATGA
AAAGTTTGTTTCAAAACGTTTGTCTACAAACAAAGTCTTTCCACTGCGCAACAGGGACTG
ATAGATAGTGAGATATTTCCTTCTTCTTTTGATGATTGCCAGGTATTTGAGACATGAGTT
CCTTCAAAGCGTTGATATTTCGCTTTTCCAAGCAGAGTTTAACTGCTTCATCTACCATAT
TTAACCGAATAACAATCTGTATAAGCTCTTCATCATCACTTATATATTTCAAGTAACTTT
CAATAATGTTTTTTGGGACATCTAATGAATTGAGATGAAGGATAAAACGGTCAGTTGGGA
TGGTAACCTCCATACGACGCGACAAAGATTTCTTATTTTAACATGATAAATTCCAGATCG
TCCCAGTTTTGTGACTGAACAAGGGGCTCTATTAACAACCATCTAAACTGTTCGTCCGAT
ATTTTGAACTTTTTCCCAAGAGTTTCAGCC

consensusID : consensus_9704#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 496
fasta sequence

                              [CGGCACGAGGGTTACAACGTACCGAGAGTGTTGTGTGACTCTTGCTTCGTTTTATCTCGCTACTGATACTCACTCTTCCTGAAACTTCGAAAGTGTCTCAATTCCTTGAATTCGGGATCTCATCCAGACCAATTTTTTGGCAACCACTTACCTGCTATTCCATTCCCACCCTTTCTTAAAGCGAACCATTTGACGCTCGAGTCATGGGCTTCTTCCACTTAGCAAACTGCCTGGCGTTGGCTACGGGTCCTCATTTGCTGGTATACAAGTCTACTGGAATACCAGATAATGATGCATTTTGGCCCTGTTTCAAAATTGCATGCGTGTACGCACTTACACAGATCTTGAAGTTTTTCCTGGTCACTTTAGCTCCTCATAACTATTTGTCTAAGGGAGATTCTGTGACATTTGATGTTTTCGGTATAGTACTAGAGATAATAGTAATCACTATGATTGTACGTGGATCACTTTGCAGAAGTGAGTTCAATGTAGTAGC]

[+] EMBL CD083795             [CGGCACGAGGGTTACAACGTACCGAGAGTGTTGTGTGACTCTTGCTTCGTTTTATCTCGCTACTGATACTCACTCTTCCTGAAACTTCGAAAGTGTCTCAATTCCTTGAATTCGGGATCTCATCCAGACCAATTTTTTGGCAACCACTTACCTGCTATTCCATTCCCACCCTTTCTTAAAGCGAACCATTTGACGCTCGAGTCATGGGCTTCTTCCACTTAGCAAACTGCCTGGCGTTGGCTACGGGTCCTCATTTGCTGGTATACAAGTCTACTGGAATACCAGATAATGATGCATTTTGGCCCTGTTTCAAAATTGCATGCGTGTACGCACTTACACAGATCTTGAAGTTTTTCCTGGTCACTTTAGCTCCTCATAACTATTTGTCTAAGGGAGATTCTGTGACATTTGATGTTTTCGGTATAGTACTAGAGATAATAGTAATCACTATGATTGTACGTGGATCACTTTGCAGAAGTGAGTTCAATGTAGTAGC]




>consensus_9704#3
CGGCACGAGGGTTACAACGTACCGAGAGTGTTGTGTGACTCTTGCTTCGTTTTATCTCGC
TACTGATACTCACTCTTCCTGAAACTTCGAAAGTGTCTCAATTCCTTGAATTCGGGATCT
CATCCAGACCAATTTTTTGGCAACCACTTACCTGCTATTCCATTCCCACCCTTTCTTAAA
GCGAACCATTTGACGCTCGAGTCATGGGCTTCTTCCACTTAGCAAACTGCCTGGCGTTGG
CTACGGGTCCTCATTTGCTGGTATACAAGTCTACTGGAATACCAGATAATGATGCATTTT
GGCCCTGTTTCAAAATTGCATGCGTGTACGCACTTACACAGATCTTGAAGTTTTTCCTGG
TCACTTTAGCTCCTCATAACTATTTGTCTAAGGGAGATTCTGTGACATTTGATGTTTTCG
GTATAGTACTAGAGATAATAGTAATCACTATGATTGTACGTGGATCACTTTGCAGAAGTG
AGTTCAATGTAGTAGC

consensusID : consensus_9704#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 485
fasta sequence

                              [AAATATCAACGCTTTGAAGGAACCCATGTCTCAAATACCTGGCAATCATCAAAAGAAGAAGGAAATATCTCACTATCTATCAGTCCCTGTAAGATATTTTGATTATTCTTATACCTAACGTCGTTGATTAAATTGTAGTAGGTACTGTCGCAAATATGTCACGTTGGATATTTCGATTATGATACTGTATCATAAGCGAAAAACATACGATCTGCACAGAGATAAGCTAGCTTACTTGTAAATCGGCATTATATAATTCGAGCAAGCAAGTAATTAGTCATTTAACAGTACTTAGAGCATGTGTTCTGGAAGCATCTGGTTAACTGGACGCTTCGTTATGTTGGTAGTCGTGAACTTCGGTCTTGAGGCAAGATATTACCTGTGTAACGGTAAAACTGACCATTATATTCTAATAATTTCGTCTATCGGATCGGGAATCTTTTAGTGTTAATCAAATATTGGGATTTCAAGGCTGATGATAAGAT]

[+] EMBL CD094730             [AAATATCAACGCTTTGAAGGAACCCATGTCTCAAATACCTGGCAATCATCAAAAGAAGAAGGAAATATCTCACTATCTATCAGTCCCTGTAAGATATTTTGATTATTCTTATACCTAACGTCGTTGATTAAATTGTAGTAGGTACTGTCGCAAATATGTCACGTTGGATATTTCGATTATGATACTGTATCATAAGCGAAAAACATACGATCTGCACAGAGATAAGCTAGCTTACTTGTAAATCGGCATTATATAATTCGAGCAAGCAAGTAATTAGTCATTTAACAGTACTTAGAGCATGTGTTCTGGAAGCATCTGGTTAACTGGACGCTTCGTTATGTTGGTAGTCGTGAACTTCGGTCTTGAGGCAAGATATTACCTGTGTAACGGTAAAACTGACCATTATATTCTAATAATTTCGTCTATCGGATCGGGAATCTTTTAGTGTTAATCAAATATTGGGATTTCAAGGCTGATGATAAGAT]




>consensus_9704#4
AAATATCAACGCTTTGAAGGAACCCATGTCTCAAATACCTGGCAATCATCAAAAGAAGAA
GGAAATATCTCACTATCTATCAGTCCCTGTAAGATATTTTGATTATTCTTATACCTAACG
TCGTTGATTAAATTGTAGTAGGTACTGTCGCAAATATGTCACGTTGGATATTTCGATTAT
GATACTGTATCATAAGCGAAAAACATACGATCTGCACAGAGATAAGCTAGCTTACTTGTA
AATCGGCATTATATAATTCGAGCAAGCAAGTAATTAGTCATTTAACAGTACTTAGAGCAT
GTGTTCTGGAAGCATCTGGTTAACTGGACGCTTCGTTATGTTGGTAGTCGTGAACTTCGG
TCTTGAGGCAAGATATTACCTGTGTAACGGTAAAACTGACCATTATATTCTAATAATTTC
GTCTATCGGATCGGGAATCTTTTAGTGTTAATCAAATATTGGGATTTCAAGGCTGATGAT
AAGAT

consensusID : consensus_9704#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 287
fasta sequence

                              [CACCGACACCAACACCAGACTCCCTATCACTCTCTACCACTGTCTCCTACAGCTGCCTCGACAAGTCTGATACCTCTTCGCCAGACTCAAAAACCACACATCCAATGCTGTACAAGCCCTGTAAGACAATGACATATTTCCTTCTTCTTTTGATGATTGCCAGGTATTTGATACATGAGTTTCTTCAAAGCGTTGATATTTCGCTTTTCCAAGCAGAGGTTAACTGCTTCATCTACCATATTTAACCGAATAACAATCTGTATAAGCTCTTCATCATCACTTATATA]

[+] EMBL CD142729             [CACCGACACCAACACCAGACTCCCTATCACTCTCTACCACTGTCTCCTACAGCTGCCTCGACAAGTCTGATACCTCTTCGCCAGACTCAAAAACCACACATCCAATGCTGTACAAGCCCTGTAAGACAATGACATATTTCCTTCTTCTTTTGATGATTGCCAGGTATTTGATACATGAGTTTCTTCAAAGCGTTGATATTTCGCTTTTCCAAGCAGAGGTTAACTGCTTCATCTACCATATTTAACCGAATAACAATCTGTATAAGCTCTTCATCATCACTTATATA]




>consensus_9704#5
CACCGACACCAACACCAGACTCCCTATCACTCTCTACCACTGTCTCCTACAGCTGCCTCG
ACAAGTCTGATACCTCTTCGCCAGACTCAAAAACCACACATCCAATGCTGTACAAGCCCT
GTAAGACAATGACATATTTCCTTCTTCTTTTGATGATTGCCAGGTATTTGATACATGAGT
TTCTTCAAAGCGTTGATATTTCGCTTTTCCAAGCAGAGGTTAACTGCTTCATCTACCATA
TTTAACCGAATAACAATCTGTATAAGCTCTTCATCATCACTTATATA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9704#0      AGGCCATTAATTCGGCACCAGGCGAGAGTGTTGTGTGACTCTTGCTTCGTTTTATCTCGC 60
consensus_9704#3      CGGCACGAGGGTTACAACGTACCGAGAGTGTTGTGTGACTCTTGCTTCGTTTTATCTCGC 60
consensus_9704#2      --------------------GCGTACAAAAGT-CGAGACTCAAAATCCAGCTC-ATCAGT 38
consensus_9704#5      -------------------CACCGACACCAACACCAGACTCCCTATCACTCTCTACCACT 41
consensus_9704#1      ---------------------------TCTCCCCGTTATTGCGGGGCCAGCTAGAAGCAT 33
consensus_9704#4      ---------------------------------AAATATCAACGCTTTGAAGGAACCCAT 27
                                                           *                      

consensus_9704#0      TACTGATACTCACTCTTCCTGAAACTTCGAAAGTGTCTCAATTCCTTGAATTCGGGATCT 120
consensus_9704#3      TACTGATACTCACTCTTCCTGAAACTTCGAAAGTGTCTCAATTCCTTGAATTCGGGATCT 120
consensus_9704#2      GTTTCTCAAAAACGTAAAATGAAAAGTTTGT----T-TCAAAACGTTTGTCTACAAACAA 93
consensus_9704#5      GTCTCCTACAGCTGCCT--CGACAAGTCTGA----TACCTCTTCGCCAGACT-CAAAAAC 94
consensus_9704#1      ATTTTATGCATTATTGTCCCATAAAATTGAGAACATCTTTGTTACCCTCGCGATAAAACC 93
consensus_9704#4      GTCTCAAATACCTGGCAATCATCAAAAGAAGAA-----GGAAATATCTCACTATCTATCA 82
                         *                   *                                *   

consensus_9704#0      CATCCAGACCAATTTTTTGGCAACCACTTACCTGCTATTCCATTCCCACCCTTTCTTAAA 180
consensus_9704#3      CATCCAGACCAATTTTTTGGCAACCACTTACCTGCTATTCCATTCCCACCCTTTCTTAAA 180
consensus_9704#2      AGTCT--TTCCACTGCGCAACAGGGACTGATAGATAGTGAGATATTTCCTTCTTCTTTTG 151
consensus_9704#5      CACAC--ATCCAATGCTGTACAAGCCCTGTAAGACAATGACATATTTCCTTCTTCTTTTG 152
consensus_9704#1      AATCATTTGTATTATTTTCGGAATTCCAACTATGATAATACGATCCCAAAGGCATACTGC 153
consensus_9704#4      GTCCCTGTAAGATATTTTGATTATTCTTA-TACCTAACGTCGTTGATTAAATTGTAGTAG 141
                                                                                  

consensus_9704#0      GCGAACCATTTGACGCTCGAGTCATGGGCTTCTTCCACTTAGCAAACTGCCTGGC--GTT 238
consensus_9704#3      GCGAACCATTTGACGCTCGAGTCATGGGCTTCTTCCACTTAGCAAACTGCCTGGC--GTT 238
consensus_9704#2      ATGA-TTGCCAGGTATTTGAGACATGAGTTCCTTCAAAGCGTTGA--TATTTCGC--TTT 206
consensus_9704#5      ATGA-TTGCCAGGTATTTGATACATGAGTTTCTTCAAAGCGTTGA--TATTTCGC--TTT 207
consensus_9704#1      CCGAATTAAAGCACGGGAATCGCAAGGATTATTCCCCATTATTCGCTTGTTATATCAGTT 213
consensus_9704#4      GTA--CTGTCGCAAATATGTCACGTTGGATATTTC-GATTATGATACTGTATCAT----- 193
                                            *      *  * *            *            

consensus_9704#0      GGCTACGGGTCCTCATTTGCTGGTATACAAGTCT----ACTGGAATACCAGATAAT-GAT 293
consensus_9704#3      GGCTACGGGTCCTCATTTGCTGGTATACAAGTCT----ACTGGAATACCAGATAAT-GAT 293
consensus_9704#2      TCCAAGCAGAGTTTAACTGCT--TCATCTACCAT----ATTTAA---CCGAATAAC-AAT 256
consensus_9704#5      TCCAAGCAGAGGTTAACTGCT--TCATCTACCAT----ATTTAA---CCGAATAAC-AAT 257
consensus_9704#1      GACAACGGGACGATACATATGTGGGTACAAAAGTCGAGACTCAAAATCCAGCTCATCAGT 273
consensus_9704#4      ---AAGCGAAAAACATACGATC-TGCACAGAGAT---AAGCTAG---CTTACTTGTAAAT 243
                          *         *            *     *    *        *    *      *

consensus_9704#0      GCATTTTGGCCCTGTTTCAAAA-TTGCATGCGTGTACGCACTTACACAGAT-CTTGAAGT 351
consensus_9704#3      GCATTTTGGCCCTGTTTCAAAA-TTGCATGCGTGTACGCACTTACACAGAT-CTTGAAGT 351
consensus_9704#2      CTGTATAAGCTCTTCATCATCACTTATATATTTCAAGTAACTTTCAATAATGTTTTTTGG 316
consensus_9704#5      CTGTATAAGCTCTTCATCATCACTTATATA------------------------------ 287
consensus_9704#1      GTTTTTCAAAAACGTAAAATGAAAAGTTTGTTTCAAAACGTTTGTTTACAAACAAAGTTT 333
consensus_9704#4      CGGCATTATATAATTCGAGCAA---GCAAGTAATTAGTCATTTAACAGTACTTAGAGCAT 300
                           *               *                                      

consensus_9704#0      TTTTCCTGGTCACTTTAGCTCCTCATAACTATTTGTCTAAGGGAGATTCTGTGACATTTG 411
consensus_9704#3      TTTTCCTGGTCACTTTAGCTCCTCATAACTATTTGTCTAAGGGAGATTCTGTGACATTTG 411
consensus_9704#2      GACATCTAATGAATTGAGATGAAGGATAAAACGGTCAGTTGGGATGGTAACCTCCATACG 376
consensus_9704#5      ------------------------------------------------------------
consensus_9704#1      TTCCATTGCGCACCCTACAATTAAGAAAATGATTATTCTAGCGTTATTTATACGTACTTG 393
consensus_9704#4      GTGTTCTGGAAGCATCTGGTTAACTGGACGCTTCGTTATGTTGGTAGTCGTGAACTTCGG 360
                                                                                  

consensus_9704#0      ATGTTTTCGGTATAGTACTAGAGATAATAGTAATCACTATGATTGTACGTGGATC----- 466
consensus_9704#3      ATGTTTTCGGTATAGTACTAGAGATAATAGTAATCACTATGATTGTACGTGGATC----- 466
consensus_9704#2      ACGCGACAAAGATTTCTTATTTTAACATGATAAATTCCA-GATCGTCCCAGTTTT----- 430
consensus_9704#5      ------------------------------------------------------------
consensus_9704#1      AAAACAGAAAATGTGTTTCAAATGCTAGTTTCTTTAAAATAAATGCGATGTAATCCAAGG 453
consensus_9704#4      TCTTGAGGCAAGATATTACCTGTGTAACGGTAAAACTGACCATTATATTCTAATAATTTC 420
                                                                                  

consensus_9704#0      ACTTTGCAGAAGTGAGTTCAATGTAGTAGCATCCAGTGTAGGCTGGTCAATCGCTTCATT 526
consensus_9704#3      ACTTTGCAGAAGTGAGTTCAATGTAGTAGC------------------------------ 496
consensus_9704#2      GTGACTGAACAAGGGGCTCTATTAACAACCATCTAAACTGTTCGTCCGATATTTTGAACT 490
consensus_9704#5      ------------------------------------------------------------
consensus_9704#1      GTTTGGTTAACTGCTGTTAAATTAAATGCTCAAATGTATTTCATATGGCATAACTATAGC 513
consensus_9704#4      GTCTATCGGATCGGGAATCTTTTAGTGTTAATCAAATATTGGGATTTCAAGGCTGATGAT 480
                                                                                  

consensus_9704#0      AGTAACCACAAGATATGTCCCAATTTGGGTTGGTACGCGTGGACTAGAATTCGACTGGAA 586
consensus_9704#3      ------------------------------------------------------------
consensus_9704#2      TTTTCCCAAGAGTTTCAGCC---------------------------------------- 510
consensus_9704#5      ------------------------------------------------------------
consensus_9704#1      ACAACATCCCAGTGATGATCAAGTGAATTTATCACCAGGTTAAGTAGCTGCATCAATAAG 573
consensus_9704#4      AAGAT------------------------------------------------------- 485
                                                                                  

consensus_9704#0      ATACTTGTGTTTGAGTTACGAAGCAAACTTGGATTTGATTGATACATTTGTAATGTCGTA 646
consensus_9704#3      ------------------------------------------------------------
consensus_9704#2      ------------------------------------------------------------
consensus_9704#5      ------------------------------------------------------------
consensus_9704#1      TTGGTTTATTTGAATTTTAGTGAGACAATTGCGAAACCGAGAAGTAGGTGAATAATTAGA 633
consensus_9704#4      ------------------------------------------------------------
                                                                                  

consensus_9704#0      CTCTATTTGGCTATTATCACGTCGCTCAGGCCCTACGTGGAGCACTCTACTGGGCCTTCT 706
consensus_9704#3      ------------------------------------------------------------
consensus_9704#2      ------------------------------------------------------------
consensus_9704#5      ------------------------------------------------------------
consensus_9704#1      AAGAAAGAACTAGGAATATGTTCATACAGAATCTGTTTATATACAACAAAGAAGCCAGGA 693
consensus_9704#4      ------------------------------------------------------------
                                                                                  

consensus_9704#0      CACCGTTATTGCGGGGCCAGCTAGAAGCATATTTTATGCATTATTGTCCCATAAAATTGA 766
consensus_9704#3      ------------------------------------------------------------
consensus_9704#2      ------------------------------------------------------------
consensus_9704#5      ------------------------------------------------------------
consensus_9704#1      AAATGTCCTCTAAATTAAACCATTTCTTAAATTAGACGATTTAAATTTATTACTATGTAC 753
consensus_9704#4      ------------------------------------------------------------
                                                                                  

consensus_9704#0      GAACATCTTTGTTACCCTCGCGATANAAACAATCATTTGTATTATCTTCGGAATTACAAC 826
consensus_9704#3      ------------------------------------------------------------
consensus_9704#2      ------------------------------------------------------------
consensus_9704#5      ------------------------------------------------------------
consensus_9704#1      AATAGTCTTCATTATTTCCTAATGTTTTATTATGGCTCATATTGACTCCGAAGATATCGG 813
consensus_9704#4      ------------------------------------------------------------
                                                                                  

consensus_9704#0      TATGATNAATACGATCACAAGGCATACTGACCGAACTGAAGCACCNGAAATCGCAGGGAT 886
consensus_9704#3      ------------------------------------------------------------
consensus_9704#2      ------------------------------------------------------------
consensus_9704#5      ------------------------------------------------------------
consensus_9704#1      TTTTTGGTATGTTTTCCTTTGGATAGTACAGTGAGTGAAGCGCATTCAAATTAGCAGTAT 873
consensus_9704#4      ------------------------------------------------------------
                                                                                  

consensus_9704#0      ATTCACCATTATTCGCTTGGTATATCAGNTGACAACGGGACGATACATATGTGCGTACAA 946
consensus_9704#3      ------------------------------------------------------------
consensus_9704#2      ------------------------------------------------------------
consensus_9704#5      ------------------------------------------------------------
consensus_9704#1      GATTGGCAATTTTACAAATGTATATGATGATCTGATCAAAAATTTCTAA----------- 922
consensus_9704#4      ------------------------------------------------------------
                                                                                  

consensus_9704#0      AAGTCGAGACTCAAAATCAGCTCATCAGTGTTTCTCAAAACGTAAAATGAAAGTTTGTTT 1006
consensus_9704#3      ------------------------------------------------------------
consensus_9704#2      ------------------------------------------------------------
consensus_9704#5      ------------------------------------------------------------
consensus_9704#1      ------------------------------------------------------------
consensus_9704#4      ------------------------------------------------------------
                                                                                  

consensus_9704#0      CAAACGTTTGCTACAACAAAGTCTTCCCTGCGCAACTACATNAAGAAATGATATCTAGCG 1066
consensus_9704#3      ------------------------------------------------------------
consensus_9704#2      ------------------------------------------------------------
consensus_9704#5      ------------------------------------------------------------
consensus_9704#1      ------------------------------------------------------------
consensus_9704#4      ------------------------------------------------------------
                                                                                  

consensus_9704#0      TATTATACGACTTGAAACAGAATGTGTTCAATGCTAGTTCTTAATAA 1113
consensus_9704#3      -----------------------------------------------
consensus_9704#2      -----------------------------------------------
consensus_9704#5      -----------------------------------------------
consensus_9704#1      -----------------------------------------------
consensus_9704#4      -----------------------------------------------