These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9710#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1176 fasta sequence [CATCTACTATGATTTTATCGTCAAAGTAGTCTTTTTTTGTAGATGATTTTACTTTTATAGTCACTTTTTAAACAGAAATCAATAAATATCCAGTCTTTCTTTTTTTTTCATCAAAATTTCTATTTTTCCTTATTTTTGCTATTATACCAACCCTTGAGGAGACATGTCGTCTTTTCGGCGCCATTTATCTTTATTTTGATTTAAACGAAGTTGATTTACTACACTTTACTCTTTTTCCGTGCATATTTAAAATTCGCGCAAAAACCTGAAAAGAAGGATGATTTTCACAAAAGGAGATTTGTTGTACAATGAAAATTTACTATTGTTTACACAATTAATTATGGGCATTAACCTAACGTTTCTGTCCTCTTTATGTTGTCTACTTCGTTACACGGATTACGCGGTTATCTGGATAAATAACTGACGATAAGTATGAACGGAACAACAAGAATAATGGAAAGCCATCCGTTAAATTGTTGTTCACTTATCTATATCATCATATTATTATTATTATTTCTGCTTTTTTTCCCGTCATAGATCTTCAGAACATATATAAGAATATATTACAATTTCATGTATCATCATTTATTTATGGAGATTTGATTAGGAATAAATGATTCATTTAATAATGATGTCTTTGATGATTATCTGTCACAGATCATACGTAATGGGTTTCCTTAAATCTTCCTACTTTTTTTTACTTCATTGCTTGTTAACTGCATTGAGTTTTCCCTATTTCTCACACACACACATTGGAGTAAATGCCAATCAGCTAAATAATGAAATATCTTTCTCCCTAACGTCATTATTTTTCATTATGGCTGTATATCATAGTCTTATTATAATCTGTATAGTTTTGGATCCACACTAAATCTCTATAGAATGTCGTTTCACTGAATTTATTTGTGTACATCATCTACTTATTTCCGCTTATTCTGATTGTCTGCTTTTGCGTATAACAC-ACTACAAAATCATTAATCGAATCCCAATCAGCTTTCCTCGCTTTTTATTTTGGTATGTGTTTTTCGCCACCTCTTTTTTATTCGTTTTTCCAAAGATCTTTTCTCATCGCTTTAATTGAAATTATTATTATCACTACCATTATTGTGTTCATTTACATTTACGTCGACATTTTCTATCTCTTTGAACTTAAGATTTGCGTGTCTAGTTATTTTT] [-] EMBL CD136776 [CATCTACTATGATTTTATCGTCAAAGTAGTCTTTTTTTGTAGATGATTTTACTTTTATAGTCACTTTTTAAACAGAAATCAATAAATATCCAGTCTTTCTTTTTTTTTCATCAAAATTTCTATTTTTCCTTATTTTTGCTATTATACCAACCCTTGAGGAGACATGTCGTCTTTTCGGCGCCATTTATCTTTATTTTGATTTAAACGAAGTTGATTTACTACACTTTACTCTTTTTCCGTGCATATTTAAAATTCGCGCAAAAACCTGAAAAGAAGGATGATTTTCACAAAAGGAGATTTGTTGTACAATGAAAATTTACTATTGTTTACACAATTAATTATGGGCATTAACCTAACGTTTC ] [+] EMBL CD083476 [ gcacgaggCAAAAGGAGATTTGTTGTACAATGAAAATTTACTATTGTTTACACAATTAATTATGGGCATTAACCTAACGTTTCTGTCCTCTTTATGTTGTCTACTTCGTTACACGGATTACGCGGTTATCTGGATAAATAACTGACGATAAGTATGAACGGAACAACAAGAATAATGGAAAGCCATCCGTTAAATTGTTGTTCACTTATCTATATCATCATATTATTATTATTATTTCTGCTTTTTTTCCCGTCATAGATCTTCAGAACATATATAAGAATATATTACAATTTCATGTATCATCATTTATTTATGGAGATTTGATTAGGAATAAATGATTCATTTAATAATGATGTCTTTGATGATTATCTGTCACAGATCATACGTAATGGGTTTCCTTAAATCTTCCTACTTTTTTTTACTTCATTGCTTGTTAACTGCATTGAGTTTTCCCTATTTCTCACACACACACATTGGAGTAAATGCCAATCAGCTTAATTATGAAATAT ] [+] EMBL CD201964 [ ATTGTTGTTCACTTATCTATATCATCATATTATTATTATTATTTCTGCTTTTTTTCCCGTCATAGATCTTCAGAACATATATAAGAATATATTACAATTTCATGTATCATCATTTATTTGTGGAGATTCGATTAGGAATAAATGATTCATTTAATAATGATGTCTTTGATGATTATCTGTCACAGATCATACGTAATGGGTTTCCTTAAATCTTCCTACTTTTTTTTACTTCATTGCTTGTTAACTGCATTGAGTTTTCCCTATTTCTCACACACGCACATTGGAGTAAATGCCAATCAGCTAAATAATGAAATATCTTTCTCCCTAACGCCATTATTTTTCATTATGGCTGTATATCATAGTCTTATTATAATCTGTATAGTTTTGGATCCACACTAAATCTCTATAGAATGTCGTTTCACTGAATTTATTTGTGTACATCATCTACTTATTTCCGCTTATTCTGATTGTCTGCTTTTGCGTATAACAC ACTACAAAATCATTAATCGAATCCCAATCAGCTTTCCTCGCTTTTTATTTTGGTATGTGTTTTCCG CACCTCTTTTTTATTCGTTTTTCCAAAGATCTTTTCTCATCGCTTTAATTGAAA TATTATTATCACTACCATTATGGTGTTCATTTACATTTACGTCGACATTTTCTATCTCTTTGAACTTAAGATTGGCGTG CTAGTTATTTT ] [-] EMBL CD202050 [ TTGTTGTTCACTTATCTATATCATCATATTATTATTATTATTTCTGCTTTTTTTCCCGTCATAGATCTTCAGAACATACATAAGAATATATTACAATTTCATGTATCATCATTTATTTATGGAGACTTGATTAGGAATAAATGATTCATTTAATAATGATGTCTTTGATGATTATCTGTCACAGATCATACGTAATGGGTTTCCTTAAATCTTCCTAC TTTTTTACTTCATTGCTTGTTAACTGCATTGAGTTTTCCCTATTTCTCACACACACACATTGGAGTAAATGCCAATCAGCTAAATAATGAAATATCTTTCTCCCTAACGTCATTATTTTTCATTATGGCTGTATATCATAGTCTTATTATAATCTGTATAGTTTTGGATCCACACTAAATCTCTATAGAATGTCGTTTCACTGAATTTATTTG GAACATCATCTAATTATTTCCGCTTATTCTGATTGTCTGCTTTTGCGTAT ACACTACTACAAAATCATTAATCGA ] [-] EMBL CD201894 [ ATGAAATATCTTTCTCCCTAACGTCATTATTTTTCATTATGGCTGTATATCATAGTCTTATTATAATCTGTATAGTTTTGGATCCACACTAAATCTCTATAGAATGTCGTTTCACTGAATTTATTTGTGTACATCATCTACTTATTTCCGCTTATTCTGATTGTCTGCTTTTGCGTGTAACAC ACTACAAAATCATTAATCGAATCCCAATCAGCTTTCCTCGCTTTTTATTTTGGTATGTGTTTTTCGCCACCTCTTTTTTATTCGTTTTTCCAAAGATCTTTTCTCATCGCTTTAATTGAAATTATTATTATCACTACCATTATTGTGTTCATTTACATTTACGTCGACATTTTCTATCTCTTTGAACTTAAGATTTGCGTGTCTAGTTATTTTT] [-] EMBL CD201940 [ ATGAAATATCTTTCTCCCTAACGTCATTATTTTTCATTATGGCTGTATATCATAGTCTTATTATAATCTGTATAGTTTTGGATCCACACTAAATCTCTATAGAATGTCGTTTCACTGAATTTATTTGTGTACATCATCTACTTATTTCCGCTTATTCTGATTGTCTGCTTTTGCGTATAACAC ACTACACCATCATT ] [+] EMBL CD202048 [ aaaGGATCCACACTAAATCTCTATAGAATGTCGTTTCACTGAATTTATTTGTGTACATCATCTACTTATTTCCGCTTATTCTGATTGTCTGCTTTTGCGTATAACAC ACTACAAAATCATTAATCGAATCCCAATCAGCTTTCCTCGCTTTTTATTTTGGTATGTGTTTTTCGCCACCTCTTTTTTATTCGTTTTTCCAAAGATCTTTTCTCATCGCTTTAATTGAAATTATTATTATCACTACCATTATTGTGTTCATTTACATTTACGTCGACATTTTCTATCTCTTTGAACTTAAGATTTGCGTGTCTAGTTATTTT ] [+] EMBL CD202035 [ aGGATCCACACTAAATCTCTATAGAATGTCGTTTCACTGAATTTATTTGTGTACATCATCTACTTATTTCCGCTTATTCTGATTGTCTGCTTTTGCGTATAACAC ACTACAAAATCATTAATCGAATCCCAATCAGCTTTCCTCGCTTTTTATTTTGGTATGTGTTTTTCGCCACCTCTTTTTTATTCGTTTTTCCAAAGATCTTTTCTCATCGCTTTAATTGAAATTATTATTATCACTACCATTATTGTGTTCATTTACATTTACGTCGACATTTTCTATCTCTTTGAACTTAAGATTTGCGTGTCTAGTTATTTT ] [+] EMBL CD202046 [ aaaGGATCCACACTAAATCTCTATAGAATGTCGTTTCACTGAATTTATTTGTGTACATCATCTACTTATTTCCGCTTATTCTGATTGTCTGCTTTTGCGTATAACAC ACTACAAAATCATTAATCGAATCCCAATCTGCTTTCCTCGCTTTTTATTTTGGTATGTGTTTTTCGCCACCTCTTTTTTATTCGTTTTTCCAAAGATCTTTTCTCATCGCTTTAATTGAAATTATTATTATCACTACCATTATTGTGTTCATTTACATTTACGTCGACATTTTCTATCTCTTTGAACTTAAGATTTGCGTGTCTAGTTATTTT ] [+] EMBL CD202028 [ ACTAAATCTCTATAGAATGTCGTTTCACTGAATTTATTTGTGTACATCATCTACTTATTTCCGCTTATTCTGATTGTCTGCTTTTGCGTATAACAC ACTACAAAATCATTAATCGAATCCCAATCAGCTTTCCTCGCTTTTTATTTTGGTATGTGTTTTTCGCCACCTCTTTTTTATTCGTTTTTCCAAAGATCTTTTCTCATCGCTTTAATTGAAATTATTATTATCACTGCCATTATTGTGTTCATTTACATTTACGTCGACATTTTCTATCTCTTTGAACTTAAGATTTGCGTGTCTAGTTATTTT ] [-] EMBL CD072091 [ TGATTGTCTGCTTTTGCGTATAACAC GCTACAAAATCATTAATCGAATCCCAATCAGCTTTCCTCGCTTTTTATTTTGGTATGTGTTTTTCGACACCTCTTTTCTATTCGTTTTTCCAAAGATCTTTTCTCATCGCTTTAATTGAAGTTATTATTATCACTAGCAATAAAGTGTTCATTCACATGTA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||