cluster # 9720

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Schistosoma mansoni
cluster # 9720 cluster # 9720 Sequences # 11 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9720#0 length = 1599 sequences # 3
consensus_9720#1 length = 838 sequences # 3

consensus_9720#2 length = 778 sequences # 3
consensus_9720#3 length = 553 sequences # 1
consensus_9720#4 length = 299 sequences # 1

consensusID : consensus_9720#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1599
fasta sequence

                              [ACGTTAACTGAAACAATCAACAACCCTTTAATGTCAAACGACAATGGAAGCTGTTCTTCAGTTTTACTACATGTAAACGTGAATGACCTATCAAGTCTATGCGTGATACTACAAGTAAGATGTAGGTCCGCCTACGACGGGAAATAGAACTGGCCCATATTCCTAACTGCGGTGTCGCGGAATGAATGCGAAAGTTCCCATTCTAGATGACTTTCACGAAGTGCTAGTGACTTCATGAATAGGTTTACTACCCACCTATGTTTTGGTCTGGTTAAAATGCATCTGGTAATGTAGCTACTTAAAAAATAGTTATTTTACGCGAATAATTCGTAGTCTGAGAACGTTTGTAAATATTTACGATGTGTATCACAGGTCTAAGTATAATGTTAACAAATCCATGCACGCGTACAGCCAGTAAAGAAGCAGTTTTTCCTTGAGATATATTTTATTGTGCAGTTGTAGCATTCATGCAATCTTGATGTGACAGAACTTGCGCAGGGTTTAACGTTACTGGTTCCACTTTTTTAAATAGAAGATTCAGATGTATGATTTGAAAGTGGAGTGCCAGAGGCCTGTGTTTGTTCTGTCCCAGCAAACTTCAGTCTAATCTCTTGAGCAAGTCATTTAAAGGTTTAGATACCAACTCTCTCAGTAGTAGATCCTATAAGTTGATTAATTAGTGGAAAACTTTGTTTTGCTCTGGGGGATACTGTTGTCTCTTGTATTTTAAATTCCTATGCTATGTCTATTGAGTCATCCTGACCTAGTTGACAGATCATATTTCAGGTCGAAAATCTTTTCTTGGGGCCTTGTTCAGTGTGTTAGAATGACGAGTGACAGTCACGATGTTGTGACCGATAAAGCTTGAATTTTTTAATCAATTAAGTAAAGGCATCTTATCCACTATAAGTTNTCTGTTCAATCGTTCTTACTGTGAATCTCAACTTGTTTTGTTTTTACTGTTAGGACCTTCAATGAGTTCAGACAACGTTGTTACTTCTTCAGTACTCCCAGATTCATATTCACTAGCTCGAAGACACTTACAGTTGAGTCGAGCAAAGCTGAAAGCCACTAGTCGAGTGTCTGCGCTGCTGGCGGGTTTCGCTATGGTTGCAATCATTGAATTGCAGGTTGCCGTTGGTGAAAGTAAACCACCTGAAGGATTATTGTTTGCTTTCACGATTCTTTCATGTCTTCTCGTTGTCGTGCATATAATGGCTGTAATGATAAGTACTTGTATCTTGCCACATATTGACTCATACACGGTCCCTCAAGACTGTTATTTGATTGAGGAAGCACCGCACAACAGATTAAGAACATTTGTTGAAGTTGCATGGATTTGCAGTACTGTCGTTGGCATTATTNNTGTTTTAGCTGTGGGTACTNTAGCATTTTGGGTAAATTTTGTCTGTGAGTACTGTCTGCATACTGCACAATGTTTGATACGCCTGCTATTTCGCATTTCGCTATATTATCGGCCTACTCTACAGTGACGACTCGAATGATCTATATGTTGCCTGTCTTCTAAGTGATCAAGATTTGACAGATACGACACTGGGGATCNATCTTGACTTTANATCTGAACAGCTTGGTCATAAT]

[-] EMBL CD201398             [ACGTTAACTGAAACAATCAACAACCCTTTAATGTCAAACGACAATGGAAGCTGTTCTTCAGTTTTACTACATGTAAACGTGAATGACCTATCAAGTCTATGCGTGATACTACAAGTAAGATGTAGGTCCGCCTACGACGGGAAATAGAACTGGCCCATATTCCTAACTGCGGTGTCGCGGAATGAATGCGAAAGTTCCCATTCTAGATGACTTTCACGAAGTGCTAGTGACTTCATGAATAGGTTTACTACCCACCTATGTTTTGGTCTGGTTAAAATGCATCTGGTAATGTAGCTACTTAAAAAATAGTTATTTTACGCGAATAATTCGTAGTCTGAGAACGTTTGTAAATATTTACGATGTGTATCACAGGTCTAAGTATAATGTTAACAAATCCATGCACGCGTACAGCCAGTAAAGAAGCAGTTTTTCCTTGAGATATATTTTATTGTGCAGTTGTAGCATTCATGCAATCTTGATGTGACAGAACTTGCGCAGGGTTTAACGTTACTGGTTCCACTTTTTTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD178709             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATGCAATCTTGATGTGACAGAACTTGCGCAGGGTCTAACGTTACTGGTTCCACTTTTTTAAATAGAAGATTCAGATGTATGATTTGAAAGTGGAGTGCCAGAGGCCTGTGTTTGTTCTGTCCCAGCAAACTTCAGTCTAATCTCTTGAGCAAGTCATTTAAAGGTTTAGATACCAACTCTCTCAGTAGTAGATCCTATAAGTTGATTAATTAGTGGAAAACTTTGTTTTGCTCTGGGGGATACTGTTGTCTCTTGTATTTTAAATTCCTATGCTATGTCTATTGAGTCATCCTGACCTAGTTGACAGATCATATTTCAGGTCGAAAATCTTTTCTTGGGGCCTTGTTCAGTGTGTTAGAATGACGAGTGACAGTCACGATGTTGTGACCGATAAAGCTTGAATTTTTTAATCAATTAAGTAAAGGCATCTTATCCACTATAAGTTNTCTGTTCAATCGTTCTTACTGTGAATCTCAACTTGTTTTGTTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD079551             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGATCCTATAAGTTGATTAATTAGTGGAAAACTTTGTTTTGCTCTGGGGGATACTGTTGTCTCTTGTATTTTAAATTCCTATGCTATGTCTATTGAGTCATCCTGACCTAGTTGACAGATCATATTTCAGGTCGAAAATCTTTTCTTGGGGCCTTGTTCAGTGTGTTAGAATGACGAGTGACAGTCACGATGTTGTGACCGATAAAGCTTGAATTTTTTAATCAATTAAGTAAAGGCATCTTATCCACTATAAGTTTTCTGTTCAATCGTTCTTACTGTGAATCTCAACTTGTTTTGTTTTTACTGTTAGGACCTTCAATGAGTTCAGACAACGTTGTTACTTCTTCAGTACTCCCAGATTCATATTCACTAGCTCGAAGACACTTACAGTTGAGTCGAGCAAAGCTGAAAGCCACTAGTCGAGTGTCTGCGCTGCTGGCGGGTTTCGCTATGGTTGCAATCATTGAATTGCAGGTTGCCGTTGGTGAAAGTAAACCACCTGAAGGATTATTGTTTGCTTTCACGATTCTTTCATGTCTTCTCGTTGTCGTGCATATAATGGCTGTAATGATAAGTACTTGTATCTTGCCACATATTGACTCATACACGGTCCCTCAAGACTGTTATTTGATTGAGGAAGCACCGCACAACAGATTAAGAACATTTGTTGAAGTTGCATGGATTTGCAGTACTGTCGTTGGCATTATTNNTGTTTTAGCTGTGGGTACTNTAGCATTTTGGGTAAATTTTGTCTGTGAGTACTGTCTGCATACTGCACAATGTTTGATACGCCTGCTATTTCGCATTTCGCTATATTATCGGCCTACTCTACAGTGACGACTCGAATGATCTATATGTTGCCTGTCTTCTAAGTGATCAAGATTTGACAGATACGACACTGGGGATCNATCTTGACTTTANATCTGAACAGCTTGGTCATAAT]




>consensus_9720#0
ACGTTAACTGAAACAATCAACAACCCTTTAATGTCAAACGACAATGGAAGCTGTTCTTCA
GTTTTACTACATGTAAACGTGAATGACCTATCAAGTCTATGCGTGATACTACAAGTAAGA
TGTAGGTCCGCCTACGACGGGAAATAGAACTGGCCCATATTCCTAACTGCGGTGTCGCGG
AATGAATGCGAAAGTTCCCATTCTAGATGACTTTCACGAAGTGCTAGTGACTTCATGAAT
AGGTTTACTACCCACCTATGTTTTGGTCTGGTTAAAATGCATCTGGTAATGTAGCTACTT
AAAAAATAGTTATTTTACGCGAATAATTCGTAGTCTGAGAACGTTTGTAAATATTTACGA
TGTGTATCACAGGTCTAAGTATAATGTTAACAAATCCATGCACGCGTACAGCCAGTAAAG
AAGCAGTTTTTCCTTGAGATATATTTTATTGTGCAGTTGTAGCATTCATGCAATCTTGAT
GTGACAGAACTTGCGCAGGGTTTAACGTTACTGGTTCCACTTTTTTAAATAGAAGATTCA
GATGTATGATTTGAAAGTGGAGTGCCAGAGGCCTGTGTTTGTTCTGTCCCAGCAAACTTC
AGTCTAATCTCTTGAGCAAGTCATTTAAAGGTTTAGATACCAACTCTCTCAGTAGTAGAT
CCTATAAGTTGATTAATTAGTGGAAAACTTTGTTTTGCTCTGGGGGATACTGTTGTCTCT
TGTATTTTAAATTCCTATGCTATGTCTATTGAGTCATCCTGACCTAGTTGACAGATCATA
TTTCAGGTCGAAAATCTTTTCTTGGGGCCTTGTTCAGTGTGTTAGAATGACGAGTGACAG
TCACGATGTTGTGACCGATAAAGCTTGAATTTTTTAATCAATTAAGTAAAGGCATCTTAT
CCACTATAAGTTNTCTGTTCAATCGTTCTTACTGTGAATCTCAACTTGTTTTGTTTTTAC
TGTTAGGACCTTCAATGAGTTCAGACAACGTTGTTACTTCTTCAGTACTCCCAGATTCAT
ATTCACTAGCTCGAAGACACTTACAGTTGAGTCGAGCAAAGCTGAAAGCCACTAGTCGAG
TGTCTGCGCTGCTGGCGGGTTTCGCTATGGTTGCAATCATTGAATTGCAGGTTGCCGTTG
GTGAAAGTAAACCACCTGAAGGATTATTGTTTGCTTTCACGATTCTTTCATGTCTTCTCG
TTGTCGTGCATATAATGGCTGTAATGATAAGTACTTGTATCTTGCCACATATTGACTCAT
ACACGGTCCCTCAAGACTGTTATTTGATTGAGGAAGCACCGCACAACAGATTAAGAACAT
TTGTTGAAGTTGCATGGATTTGCAGTACTGTCGTTGGCATTATTNNTGTTTTAGCTGTGG
GTACTNTAGCATTTTGGGTAAATTTTGTCTGTGAGTACTGTCTGCATACTGCACAATGTT
TGATACGCCTGCTATTTCGCATTTCGCTATATTATCGGCCTACTCTACAGTGACGACTCG
AATGATCTATATGTTGCCTGTCTTCTAAGTGATCAAGATTTGACAGATACGACACTGGGG
ATCNATCTTGACTTTANATCTGAACAGCTTGGTCATAAT

consensusID : consensus_9720#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 838
fasta sequence

                              [GGCCTTTATTCGGCACGAGCGGTTTTACTCTTGTGATTTGTTGCATGGACCTTAATGAGTTCAGACAACGTTGTTACTTCTTCAGTACTCCCAGATTCATATTCACTTAGCTCGAAGACACTTACAGTTGAGTCGAGCAAAGCTGAAAGCCACTAGTCGAGTGTCTGCGCTGCTGGCGGGTTTCGCTATGGTTGCAATCATTGAATTGCAGGTTGCCGTTGGTGAAAGTAAACCA-CCTGAAGGATTATTGTTTGCTTTCACGATTCTTTCATGTCTTCTCGTTGTCGTGCATATAATGGCTGTAATGATAAGTACTTGTATCTTGCCACATATTGACTCATACACGGTCCCTCAAGACTGTTATTTGATTGAGGAAGCACCGCACAACAGATTAAGAACGTAAGATACCTGTTTTTGCAGTTATCCATTTCCCCTTATAGATTTGTTGAAGTTGCATGGATTTGCAGTACTGTCGTTGGCATTATTTTGTTTTTAGCTGTGGTAACTTTAGCATTTTGGGTTAAATTTTGGTCTGTGAGTAGCTTGTCTGCCATAGCTGCAACAATTGTTTTGATACCGGCCATGCTCATTTTCGTCATTTTCGCCATATTATTTTATCGTGCGCTTACTACCTACAAAGTTGAACGAGCTACGGAAATGATACGTAATATTGATATGCGCATGTCCTTTCTTAGAAGTGGAGTCCAGAAGATGTATGACGAAGATAACAGGAAACAACATGTGTGACATCGAATACTTTTTGAACCTTTTCTAATCTATTCTTGTATACACTGCCCTCTTGTGTTCCTAGTTAAATATGAATTAAAGAATATAGGTT]

[+] EMBL CD081206             [GGCCTTTATTCGGCACGAGCGGTTTTACTCTTGTGATTTGTTGCATGGACCTTAATGAGTTCAGACAACGTTGTTACTTCTTCAGTACTCCCAGATTCATATTCACTTAGCTCGAAGACACTTACAGTTGAGTCGAGCAAAGCTGAAAGCCACTAGTCGAGTGTCTGCGCTGCTGGCGGGTTTCGCTATGGTTGCAATCATTGAATTGCAGGTTGCCGTTGGTGAAAGTAAACCA CCTGAAGGATTATTGTTTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD119642             [                                                                                                                caAAGACACTTACAGTTGAGTCGAGCAAAGCTGAAAGCCACTATTCGAGTGTCTGCGCTGCTGGCGGGTTTCTCTATGGTTGCAATCATTGAATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD077070             [                                                                                                                                                                                                         TGAATTGCAGGTTGCCGTTGGTGAAAGTAAACCACCCTGAAGGATTATTGTTTGCTTTCACGATTCTTTCATGTCTTCTCGTTGTCGTGCATATAATGGCTGTAATGATAAGTACTTGTATCTTGCCACATATTGACTCATACACGGTCCCTCAAGACTGTTATTTGATTGAGGAAGCACCGCACAACAGATTAAGAACGTAAGATACCTGTTTTTGCAGTTATCCATTTCCCCTTATAGATTTGTTGAAGTTGCATGGATTTGCAGTACTGTCGTTGGCATTATTTTGTTTTTAGCTGTGGTAACTTTAGCATTTTGGGTTAAATTTTGGTCTGTGAGTAGCTTGTCTGCCATAGCTGCAACAATTGTTTTGATACCGGCCATGCTCATTTTCGTCATTTTCGCCATATTATTTTATCGTGCGCTTACTACCTACAAAGTTGAACGAGCTACGGAAATGATACGTAATATTGATATGCGCATGTCCTTTCTTAGAAGTGGAGTCCAGAAGATGTATGACGAAGATAACAGGAAACAACATGTGTGACATCGAATACTTTTTGAACCTTTTCTAATCTATTCTTGTATACACTGCCCTCTTGTGTTCCTAGTTAAATATGAATTAAAGAATATAGGTT]




>consensus_9720#1
GGCCTTTATTCGGCACGAGCGGTTTTACTCTTGTGATTTGTTGCATGGACCTTAATGAGT
TCAGACAACGTTGTTACTTCTTCAGTACTCCCAGATTCATATTCACTTAGCTCGAAGACA
CTTACAGTTGAGTCGAGCAAAGCTGAAAGCCACTAGTCGAGTGTCTGCGCTGCTGGCGGG
TTTCGCTATGGTTGCAATCATTGAATTGCAGGTTGCCGTTGGTGAAAGTAAACCACCTGA
AGGATTATTGTTTGCTTTCACGATTCTTTCATGTCTTCTCGTTGTCGTGCATATAATGGC
TGTAATGATAAGTACTTGTATCTTGCCACATATTGACTCATACACGGTCCCTCAAGACTG
TTATTTGATTGAGGAAGCACCGCACAACAGATTAAGAACGTAAGATACCTGTTTTTGCAG
TTATCCATTTCCCCTTATAGATTTGTTGAAGTTGCATGGATTTGCAGTACTGTCGTTGGC
ATTATTTTGTTTTTAGCTGTGGTAACTTTAGCATTTTGGGTTAAATTTTGGTCTGTGAGT
AGCTTGTCTGCCATAGCTGCAACAATTGTTTTGATACCGGCCATGCTCATTTTCGTCATT
TTCGCCATATTATTTTATCGTGCGCTTACTACCTACAAAGTTGAACGAGCTACGGAAATG
ATACGTAATATTGATATGCGCATGTCCTTTCTTAGAAGTGGAGTCCAGAAGATGTATGAC
GAAGATAACAGGAAACAACATGTGTGACATCGAATACTTTTTGAACCTTTTCTAATCTAT
TCTTGTATACACTGCCCTCTTGTGTTCCTAGTTAAATATGAATTAAAGAATATAGGTT

consensusID : consensus_9720#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 778
fasta sequence

                              [GCTCGTGACTCCCACTGTG-TTCTCT-CTTGGACCTTCAATGAGTTCAGACAACGTTGTTACTTCTTCAGTACTCCCAGATTCATATTCACTAGCTCGAAGACACTTACAGTTGAGTCGAGCAAAGCTGAAAGCCACTAGTCGAGTGTCTGCGCTGCTGGCGGGTTTCGCTATGGTTGCAATCATTGAATTGCAGGTTGCCGTTGGTGAAAGTAAACCACCTGAAGGATTATTGTTTGCTTTCACGATTCTTTCATGTCTTCTCGTTGTCGTGCATATAATGGCTGTAATGATAAGTACTTGTATCTTGCCACATATTGACTCATACACGGTCCCTCAAGACTGTTATTTGATTGAGGAAGCACCGCACAACAGATTAAGAACATTTGTTGAAGTTGCATGGATTTGCAGTACTGTCGTTGGCATTATTTTGTTTTTAGCTGTGGTAACTTTAGCATTTTGGGTTAAATTTTGGTCTGTGAGTAGCTTGTCTGCCATAGCTGCAACAATTGTTTTGATACCGGCCATGCTCATTTTCGTCATTTTCGCCATATTATTTTATCGTGCGCTTACTACCTACAAAGTTGAACGAGCTACGGAAATGATACGTAATATTGATATGCGCATGTCCTTTCTTAGAAGTGGAGTCCAGAAGATGTATGACGAAGATAACAGGAAACAACATGTGTGACATCGAATACTTTTTGAACCTTTTCTAAT-CTATTCTTGTATACACT-GCCCTCTTGTG-GTCCTAGTTAAATATGAANTAAAATATATAGGT]

[+] EMBL CD080165             [GCTCGTGACTCCCACTGTG TTCTCT CTTGGACCTTCAATGAGTTCAGACAACGTTGTTACTTCTTCAGTACTCCCAGATTCATATTCACTAGCTCGAAGACACTTACAGTTGAGTCGAGCAAAGCTGAAAGCCACTAGTCGAGTGTCTGCGCTGCTGGCGGGTTTCGCTATGGTTGCAATCATTGAATTGCAGGTTGCCGTTGGTGAAAGTAAACCACCTGAAGGATTATTGTTTGCTTTCACGATTCTTTCATGTCTTCTCGTTGTCGTGCATATAATGGCTGTAATGATAAGTACTTGTATCTTGCCACATATTGACTCATACACGGTCCCTCAAGACTGTTATTTGATTGAGGAAGCACCGCACAACAGATTAAGAACATTTGTTGAAGTTGCATGGATTTGCAGTACTGTCGTTGGCATTATTTTGTTTTTAGCTGTGGTAACTTTAGCATTTTGGGTTAAATTTTGGTCTGTGAGTAGCTTGTCTGCCATAGCTGCAACAATTGTTTTGATACCGGCCATGCTCATTTTCGTCATTTTCGCCATATTATTTTATCGTGCGCTTACTACCTACAAAGTTGAACGAGCTACGGAAATGATACGTAATATTGATATGCGCATGTCCTTTCTTAGAAGTGGAGTCCAGAAGATGTATGACGAAGATAACAGG AAC ACATGTGTGACATCGAATACTTTTTGAACCTTNTCTAAT CTATTCTTGTATACACTGGCCCTC TGTG GTCCTAGTTAAATATGAATTAAAATATATAGGT]
[-] EMBL CD075036             [            tctTGTGATTGTTTGCATGGACCTTCAATGAGTTCAGACAACGTTGTTACTTCTTCAGTACTCCCAGATTCATATTCACTAGCTCGAAGACACTTACAGTTGAGTCGAGCAAAGCTGAAAGCCACTAGTCGAGTGTCTGCGCTGCTGGCGGGTTTCGCTATGGTTGCAATCATTGAATTGCAGGTTGCCGTTGGTGAAAGTAAACCACCTGAAGGATTATTGTTTGCTTTCACGATTCTTTCATGTCTTCTCGTTGTCGTGCATATAATGGCTGTAATGATAAGTACTTGTATCTTGCCACATATTGACTCATACACGGTCCCTCAAGACTGTTATTTGATTGAGGAAGCACCGCACAACAGATTAAGAACATTTGTTGAAGTTGCATGGATTTGCAGTACTGTCGTTGGCATTATTTTGTTTTTAGCTGTGGTAACTTTAGCATTTTGGGTTAAATTTTGGTCTGTGAGTAGCTTGTCTGCCATAGCTGCAACAATTGTTTTGATACCGGCCATGCTCATTTTCGTCATTTTCGCCATATTATTTTATCGTGCGCTTACTACCTACAAAGTTGAACGAGCTACGGAAATGATACGTAATATTGATATGCGCATGTCCGTTCAAAGAAGTGGAGTCCAGAAGATGTATGACGAAGATAACAGGAAACAACATGTGTGACATCGAATACTTTTTGAACCTTTTCTAATGATA TCTTGTATACACT GCCCTCTTGTGTTTTCTCGTTAAAT GGGANAAAAATA       ]
[-] EMBL CD073818             [                                                                                                                                                         CTGCTGGCGGGTTTCGCTATGGTTGCAATCATTGAATTGCAGGTTGCCGTTGGTGAAAGTAAACCACCTGAAGGATTATTGTTTGCTTTCACGATTCTTTCATGTCTTCTCGTTGTCGTGCATATAATGGCTGTAATGATAAGTACTTGTATCTTGCCACATATTGACTCATACACGGTCCCTCAAGACTGTTATTTGATTGAGGAAGCCCCGCACAACAGATTAAGAACATTTGTTGAAGTTGCATGGATTTGCAGTACTGTCGTTGGCATTATTTTGTTTTTAGCTGTGGTAACTTTAGCATTTTGGGTTAAATTTTGGTCTGTGAGTAGCTTGTCTGCCATAGCTGCAACAATTGTTTTGATACCGGCCATGGTCATTTTTGTCATTTTCGCCATATTATTTTATCGTGCGCTTACTACCTACAAAGTTGAACGAGCTACGGAAATGATACGTAATATTGATATGGGCATGTCCTTTTTTAGAAGTGGAGTCCAGAAGATGTATGACGAAGATAACAGGAAACAACATGTGTGACATCGAATACTTTTTGAACCTTTTTTAAT CTATTTTTGTATACACT GCCCTCTTGTG GGCCTAGTTAAATATGAA TATAATAa      ]




>consensus_9720#2
GCTCGTGACTCCCACTGTGTTCTCTCTTGGACCTTCAATGAGTTCAGACAACGTTGTTAC
TTCTTCAGTACTCCCAGATTCATATTCACTAGCTCGAAGACACTTACAGTTGAGTCGAGC
AAAGCTGAAAGCCACTAGTCGAGTGTCTGCGCTGCTGGCGGGTTTCGCTATGGTTGCAAT
CATTGAATTGCAGGTTGCCGTTGGTGAAAGTAAACCACCTGAAGGATTATTGTTTGCTTT
CACGATTCTTTCATGTCTTCTCGTTGTCGTGCATATAATGGCTGTAATGATAAGTACTTG
TATCTTGCCACATATTGACTCATACACGGTCCCTCAAGACTGTTATTTGATTGAGGAAGC
ACCGCACAACAGATTAAGAACATTTGTTGAAGTTGCATGGATTTGCAGTACTGTCGTTGG
CATTATTTTGTTTTTAGCTGTGGTAACTTTAGCATTTTGGGTTAAATTTTGGTCTGTGAG
TAGCTTGTCTGCCATAGCTGCAACAATTGTTTTGATACCGGCCATGCTCATTTTCGTCAT
TTTCGCCATATTATTTTATCGTGCGCTTACTACCTACAAAGTTGAACGAGCTACGGAAAT
GATACGTAATATTGATATGCGCATGTCCTTTCTTAGAAGTGGAGTCCAGAAGATGTATGA
CGAAGATAACAGGAAACAACATGTGTGACATCGAATACTTTTTGAACCTTTTCTAATCTA
TTCTTGTATACACTGCCCTCTTGTGGTCCTAGTTAAATATGAANTAAAATATATAGGT

consensusID : consensus_9720#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 553
fasta sequence

                              [ATTGATTCAGGTTCCGTTGTGAAAGTAACCCCCTGAAGGGATATTGTTTGCTTTCACGATTCTTTCATGTCTTCTCGTTGTCGTGCATATAATGGCTGTAATGATAAGTACTTGTATCTTGCCACATATTGACTCATACACGGTCCCTCAAGACTGTTATTTGATTGAGGAAGCACCGCACAACAGATTAAGAACATTTGTTGAAGTTGCATGGATTTGCAGTACTGTCGTTGGCATTATTTTGTTTTTAGCTGTGCTTGTCTGCCATAGCTGCAACAATTGTTTTGATACCGGCCATGCTCATTTTCGTCATTTTCGCCATATTATTTTATCGTGCGCTTACTACCTACAAAGTTGAACGAGCTACGGAAATGATACGTAATATTGATATGCGCATGTCCTTTCTTAGAAGTGGACGGCCAGAAGATGTATGACGAAGATAACAGGAAACAACATGTGTGACATCGAATACTTTTTGAACCTTTTCTAATCTATTCTTGTATACACTGCCCTCTTGTGTTCCTAGTTAAATATGAATTAAATAATATAGGTT]

[-] EMBL AI740310             [ATTGATTCAGGTTCCGTTGTGAAAGTAACCCCCTGAAGGGATATTGTTTGCTTTCACGATTCTTTCATGTCTTCTCGTTGTCGTGCATATAATGGCTGTAATGATAAGTACTTGTATCTTGCCACATATTGACTCATACACGGTCCCTCAAGACTGTTATTTGATTGAGGAAGCACCGCACAACAGATTAAGAACATTTGTTGAAGTTGCATGGATTTGCAGTACTGTCGTTGGCATTATTTTGTTTTTAGCTGTGCTTGTCTGCCATAGCTGCAACAATTGTTTTGATACCGGCCATGCTCATTTTCGTCATTTTCGCCATATTATTTTATCGTGCGCTTACTACCTACAAAGTTGAACGAGCTACGGAAATGATACGTAATATTGATATGCGCATGTCCTTTCTTAGAAGTGGACGGCCAGAAGATGTATGACGAAGATAACAGGAAACAACATGTGTGACATCGAATACTTTTTGAACCTTTTCTAATCTATTCTTGTATACACTGCCCTCTTGTGTTCCTAGTTAAATATGAATTAAATAATATAGGTT]




>consensus_9720#3
ATTGATTCAGGTTCCGTTGTGAAAGTAACCCCCTGAAGGGATATTGTTTGCTTTCACGAT
TCTTTCATGTCTTCTCGTTGTCGTGCATATAATGGCTGTAATGATAAGTACTTGTATCTT
GCCACATATTGACTCATACACGGTCCCTCAAGACTGTTATTTGATTGAGGAAGCACCGCA
CAACAGATTAAGAACATTTGTTGAAGTTGCATGGATTTGCAGTACTGTCGTTGGCATTAT
TTTGTTTTTAGCTGTGCTTGTCTGCCATAGCTGCAACAATTGTTTTGATACCGGCCATGC
TCATTTTCGTCATTTTCGCCATATTATTTTATCGTGCGCTTACTACCTACAAAGTTGAAC
GAGCTACGGAAATGATACGTAATATTGATATGCGCATGTCCTTTCTTAGAAGTGGACGGC
CAGAAGATGTATGACGAAGATAACAGGAAACAACATGTGTGACATCGAATACTTTTTGAA
CCTTTTCTAATCTATTCTTGTATACACTGCCCTCTTGTGTTCCTAGTTAAATATGAATTA
AATAATATAGGTT

consensusID : consensus_9720#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 299
fasta sequence

                              [AGTTCAGACAACGTTGTTACTTCTTGAGTGCTCCCAGATTCATATTCACTAGCTCGAAGACACTTACAGTTGAGTCGAACAAAGCTGAAAGCCACTAGTCGAGTGTCTGCGCTGCTGGCGGGTTTCGCTTTGGGTGCCAACATTGGATTGCAAGGTAATTTAACACTGACTGGAAATAAACGAATTTAGGTGGCCGCTGGTGAAAGTAACCCACCTGAAGGATTATGGTTGGCTCTCACAATCCTTTCATGTCTCCTGGTGGTCGCGCATATAAGGCGCTGAATGATAAGTACTTGTAT]

[+] EMBL CD119670             [AGTTCAGACAACGTTGTTACTTCTTGAGTGCTCCCAGATTCATATTCACTAGCTCGAAGACACTTACAGTTGAGTCGAACAAAGCTGAAAGCCACTAGTCGAGTGTCTGCGCTGCTGGCGGGTTTCGCTTTGGGTGCCAACATTGGATTGCAAGGTAATTTAACACTGACTGGAAATAAACGAATTTAGGTGGCCGCTGGTGAAAGTAACCCACCTGAAGGATTATGGTTGGCTCTCACAATCCTTTCATGTCTCCTGGTGGTCGCGCATATAAGGCGCTGAATGATAAGTACTTGTAT]




>consensus_9720#4
AGTTCAGACAACGTTGTTACTTCTTGAGTGCTCCCAGATTCATATTCACTAGCTCGAAGA
CACTTACAGTTGAGTCGAACAAAGCTGAAAGCCACTAGTCGAGTGTCTGCGCTGCTGGCG
GGTTTCGCTTTGGGTGCCAACATTGGATTGCAAGGTAATTTAACACTGACTGGAAATAAA
CGAATTTAGGTGGCCGCTGGTGAAAGTAACCCACCTGAAGGATTATGGTTGGCTCTCACA
ATCCTTTCATGTCTCCTGGTGGTCGCGCATATAAGGCGCTGAATGATAAGTACTTGTAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9720#1      ------------------------------------------------------------
consensus_9720#3      ------------------------------------------------------------
consensus_9720#2      ------------------------------------------------------------
consensus_9720#0      ACGTTAACTGAAACAATCAACAACCCTTTAATGTCAAACGACAATGGAAGCTGTTCTTCA 60
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      ------------------------------------------------------------
consensus_9720#3      ------------------------------------------------------------
consensus_9720#2      ------------------------------------------------------------
consensus_9720#0      GTTTTACTACATGTAAACGTGAATGACCTATCAAGTCTATGCGTGATACTACAAGTAAGA 120
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      ------------------------------------------------------------
consensus_9720#3      ------------------------------------------------------------
consensus_9720#2      ------------------------------------------------------------
consensus_9720#0      TGTAGGTCCGCCTACGACGGGAAATAGAACTGGCCCATATTCCTAACTGCGGTGTCGCGG 180
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      ------------------------------------------------------------
consensus_9720#3      ------------------------------------------------------------
consensus_9720#2      ------------------------------------------------------------
consensus_9720#0      AATGAATGCGAAAGTTCCCATTCTAGATGACTTTCACGAAGTGCTAGTGACTTCATGAAT 240
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      ------------------------------------------------------------
consensus_9720#3      ------------------------------------------------------------
consensus_9720#2      ------------------------------------------------------------
consensus_9720#0      AGGTTTACTACCCACCTATGTTTTGGTCTGGTTAAAATGCATCTGGTAATGTAGCTACTT 300
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      ------------------------------------------------------------
consensus_9720#3      ------------------------------------------------------------
consensus_9720#2      ------------------------------------------------------------
consensus_9720#0      AAAAAATAGTTATTTTACGCGAATAATTCGTAGTCTGAGAACGTTTGTAAATATTTACGA 360
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      ------------------------------------------------------------
consensus_9720#3      ------------------------------------------------------------
consensus_9720#2      ------------------------------------------------------------
consensus_9720#0      TGTGTATCACAGGTCTAAGTATAATGTTAACAAATCCATGCACGCGTACAGCCAGTAAAG 420
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      ------------------------------------------------------------
consensus_9720#3      ------------------------------------------------------------
consensus_9720#2      ------------------------------------------------------------
consensus_9720#0      AAGCAGTTTTTCCTTGAGATATATTTTATTGTGCAGTTGTAGCATTCATGCAATCTTGAT 480
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      ------------------------------------------------------------
consensus_9720#3      ------------------------------------------------------------
consensus_9720#2      ------------------------------------------------------------
consensus_9720#0      GTGACAGAACTTGCGCAGGGTTTAACGTTACTGGTTCCACTTTTTTAAATAGAAGATTCA 540
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      ------------------------------------------------------------
consensus_9720#3      ------------------------------------------------------------
consensus_9720#2      ------------------------------------------------------------
consensus_9720#0      GATGTATGATTTGAAAGTGGAGTGCCAGAGGCCTGTGTTTGTTCTGTCCCAGCAAACTTC 600
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      ------------------------------------------------------------
consensus_9720#3      ------------------------------------------------------------
consensus_9720#2      ------------------------------------------------------------
consensus_9720#0      AGTCTAATCTCTTGAGCAAGTCATTTAAAGGTTTAGATACCAACTCTCTCAGTAGTAGAT 660
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      ------------------------------------------------------------
consensus_9720#3      ------------------------------------------------------------
consensus_9720#2      ------------------------------------------------------------
consensus_9720#0      CCTATAAGTTGATTAATTAGTGGAAAACTTTGTTTTGCTCTGGGGGATACTGTTGTCTCT 720
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      ------------------------------------------------------------
consensus_9720#3      ------------------------------------------------------------
consensus_9720#2      ------------------------------------------------------------
consensus_9720#0      TGTATTTTAAATTCCTATGCTATGTCTATTGAGTCATCCTGACCTAGTTGACAGATCATA 780
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      ------------------------------------------------------------
consensus_9720#3      ------------------------------------------------------------
consensus_9720#2      ------------------------------------------------------------
consensus_9720#0      TTTCAGGTCGAAAATCTTTTCTTGGGGCCTTGTTCAGTGTGTTAGAATGACGAGTGACAG 840
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      ------------------------------------------------------------
consensus_9720#3      ------------------------------------------------------------
consensus_9720#2      ------------------------------------------------------------
consensus_9720#0      TCACGATGTTGTGACCGATAAAGCTTGAATTTTTTAATCAATTAAGTAAAGGCATCTTAT 900
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      --------------------GGCCTTTATTCGGCACGAGCGGTTTTACTCTTGTGATTTG 40
consensus_9720#3      ------------------------------------------------------------
consensus_9720#2      -------------------------------------GCTCGTGACTCCCACTGTGTTCT 23
consensus_9720#0      CCACTATAAGTTNTCTGTTCAATCGTTCTTACTGTGAATCTCAACTTGTTTTGTTTTTAC 960
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      TTGCATGGACCTTAATGAGTTCAGACAACGTTGTTACTTCTTCAGTACTCCCAGATTCAT 100
consensus_9720#3      ------------------------------------------------------------
consensus_9720#2      CTCTTGGACCTTCAATGAGTTCAGACAACGTTGTTACTTCTTCAGTACTCCCAGATTCAT 83
consensus_9720#0      TGTTAGGACCTTCAATGAGTTCAGACAACGTTGTTACTTCTTCAGTACTCCCAGATTCAT 1020
consensus_9720#4      -----------------AGTTCAGACAACGTTGTTACTTCTTGAGTGCTCCCAGATTCAT 43
                                                                                  

consensus_9720#1      ATTCACTTAGCTCGAAGACACTTACAGTTGAGTCGAGCAAAGCTGAAAGCCACTAGTCGA 160
consensus_9720#3      ------------------------------------------------------------
consensus_9720#2      ATTCACT-AGCTCGAAGACACTTACAGTTGAGTCGAGCAAAGCTGAAAGCCACTAGTCGA 142
consensus_9720#0      ATTCACT-AGCTCGAAGACACTTACAGTTGAGTCGAGCAAAGCTGAAAGCCACTAGTCGA 1079
consensus_9720#4      ATTCACT-AGCTCGAAGACACTTACAGTTGAGTCGAACAAAGCTGAAAGCCACTAGTCGA 102
                                                                                  

consensus_9720#1      GTGTCTGCGCTGCTGGCGGGTTTCGCTATGGTTGCAATCATTGAATTGCA---------- 210
consensus_9720#3      ---------------------------------------ATTGATT--CA---------- 9
consensus_9720#2      GTGTCTGCGCTGCTGGCGGGTTTCGCTATGGTTGCAATCATTGAATTGCA---------- 192
consensus_9720#0      GTGTCTGCGCTGCTGGCGGGTTTCGCTATGGTTGCAATCATTGAATTGCA---------- 1129
consensus_9720#4      GTGTCTGCGCTGCTGGCGGGTTTCGCTTTGGGTGCCAACATTGGATTGCAAGGTAATTTA 162
                                                             ****  *  **          

consensus_9720#1      --------------------------GGTTGCCGTTGGTGAAAGTAAACCACCTGAAGGA 244
consensus_9720#3      --------------------------GGTT-CCGTTG-TGAAAGTAACCC-CCTGAAGGG 40
consensus_9720#2      --------------------------GGTTGCCGTTGGTGAAAGTAAACCACCTGAAGGA 226
consensus_9720#0      --------------------------GGTTGCCGTTGGTGAAAGTAAACCACCTGAAGGA 1163
consensus_9720#4      ACACTGACTGGAAATAAACGAATTTAGGTGGCCGCTGGTGAAAGTAACCCACCTGAAGGA 222
                                                ***  *** ** ********* ** ******** 

consensus_9720#1      TTATTGTTTGCTTTCACGATTCTTTCATGTCTTCTCGTTGTCGTGCATATAATGGCTGTA 304
consensus_9720#3      ATATTGTTTGCTTTCACGATTCTTTCATGTCTTCTCGTTGTCGTGCATATAATGGCTGTA 100
consensus_9720#2      TTATTGTTTGCTTTCACGATTCTTTCATGTCTTCTCGTTGTCGTGCATATAATGGCTGTA 286
consensus_9720#0      TTATTGTTTGCTTTCACGATTCTTTCATGTCTTCTCGTTGTCGTGCATATAATGGCTGTA 1223
consensus_9720#4      TTATGGTTGGCTCTCACAATCCTTTCATGTCTCCTGGTGGTCGCGCATATAAGGCGCTGA 282
                       *** *** *** **** ** *********** ** ** **** ******** *     *

consensus_9720#1      ATGATAAGTACTTGTATCTTGCCACATATTGACTCATACACGGTCCCTCAAGACTGTTAT 364
consensus_9720#3      ATGATAAGTACTTGTATCTTGCCACATATTGACTCATACACGGTCCCTCAAGACTGTTAT 160
consensus_9720#2      ATGATAAGTACTTGTATCTTGCCACATATTGACTCATACACGGTCCCTCAAGACTGTTAT 346
consensus_9720#0      ATGATAAGTACTTGTATCTTGCCACATATTGACTCATACACGGTCCCTCAAGACTGTTAT 1283
consensus_9720#4      ATGATAAGTACTTGTAT------------------------------------------- 299
                      *****************                                           

consensus_9720#1      TTGATTGAGGAAGCACCGCACAACAGATTAAGAACGTAAGATACCTGTTTTTGCAGTTAT 424
consensus_9720#3      TTGATTGAGGAAGCACCGCACAACAGATTAAGAAC------------------------- 195
consensus_9720#2      TTGATTGAGGAAGCACCGCACAACAGATTAAGAAC------------------------- 381
consensus_9720#0      TTGATTGAGGAAGCACCGCACAACAGATTAAGAAC------------------------- 1318
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      CCATTTCCCCTTATAGATTTGTTGAAGTTGCATGGATTTGCAGTACTGTCGTTGGCATTA 484
consensus_9720#3      ----------------ATTTGTTGAAGTTGCATGGATTTGCAGTACTGTCGTTGGCATTA 239
consensus_9720#2      ----------------ATTTGTTGAAGTTGCATGGATTTGCAGTACTGTCGTTGGCATTA 425
consensus_9720#0      ----------------ATTTGTTGAAGTTGCATGGATTTGCAGTACTGTCGTTGGCATTA 1362
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      TTTTGTTTTTAGCTGTGGTAACTTTAGCATTTTGGGTTAAATTTTGGTCTGTGAGTAGCT 544
consensus_9720#3      TTTTGTTTTTAGCTGTG-----------------------------------------CT 258
consensus_9720#2      TTTTGTTTTTAGCTGTGGTAACTTTAGCATTTTGGGTTAAATTTTGGTCTGTGAGTAGCT 485
consensus_9720#0      TTNNTGTTTTAGCTGTGGGTACTNTAGCATTT--------------------------TG 1396
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      TGTCTGCCATAGCTGCAACAATTGTTTTGATACCGGCCATGCTCATTTTCGTCATTTTCG 604
consensus_9720#3      TGTCTGCCATAGCTGCAACAATTGTTTTGATACCGGCCATGCTCATTTTCGTCATTTTCG 318
consensus_9720#2      TGTCTGCCATAGCTGCAACAATTGTTTTGATACCGGCCATGCTCATTTTCGTCATTTTCG 545
consensus_9720#0      GGTAAATTTTGTCTGTGAGTACTGTCTGCATACTGCACAATGTTTGATACGCCTGCTATT 1456
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      CCATATTATTTTATCGTGCGCTTACTACCTACAAAGTTGAA-CGAGCTACGGAAATGATA 663
consensus_9720#3      CCATATTATTTTATCGTGCGCTTACTACCTACAAAGTTGAA-CGAGCTACGGAAATGATA 377
consensus_9720#2      CCATATTATTTTATCGTGCGCTTACTACCTACAAAGTTGAA-CGAGCTACGGAAATGATA 604
consensus_9720#0      TCGCATTTCGCTATATTATCGGCCTACTCTACAGTGACGACTCGAATGATCTATATGTTG 1516
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      CGTAATATTGATATGCGCATGTCCTTTCTTAGAAGTGGA-GTCCAGAAGATGTATGACGA 722
consensus_9720#3      CGTAATATTGATATGCGCATGTCCTTTCTTAGAAGTGGACGGCCAGAAGATGTATGACGA 437
consensus_9720#2      CGTAATATTGATATGCGCATGTCCTTTCTTAGAAGTGGA-GTCCAGAAGATGTATGACGA 663
consensus_9720#0      CCTGTCTTCTAAGTGATCAAGA--TTTGACAGATACGAC---ACTGGGGATCNATCTTGA 1571
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      AGATAACAGGAAACAACATGTGTGACATCGAATACTTTTTGAACCTTTTCTAATCTATTC 782
consensus_9720#3      AGATAACAGGAAACAACATGTGTGACATCGAATACTTTTTGAACCTTTTCTAATCTATTC 497
consensus_9720#2      AGATAACAGGAAACAACATGTGTGACATCGAATACTTTTTGAACCTTTTCTAATCTATTC 723
consensus_9720#0      CTTTANATCTGAACAGCTTGGTCATAAT-------------------------------- 1599
consensus_9720#4      ------------------------------------------------------------
                                                                                  

consensus_9720#1      TTGTATACACTGCCCTCTTGTGTTCCTAGTTAAATATGAATTAAAGAATATAGGTT 838
consensus_9720#3      TTGTATACACTGCCCTCTTGTGTTCCTAGTTAAATATGAATTAAATAATATAGGTT 553
consensus_9720#2      TTGTATACACTGCCCTCTTGTGGTCCTAGTTAAATATGAANTAAAATATATAGGT- 778
consensus_9720#0      --------------------------------------------------------
consensus_9720#4      --------------------------------------------------------