Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 9721 cluster # 9721       Sequences # 11       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9721#0 length = 720 sequences # 11  

consensusID : consensus_9721#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 720
fasta sequence
                              [CAGATACATACAGACCTTTTCAACCAAATGTGATGGAACGGATTTATCGTCAGGAATTGCTGGCCTCTGGATTTTCACATCGCCGATGTCTAGCTCTTGAATTGAATCAGTATTTAGAGCAATGGCTTTGGCCACATTTTGAACCAGATACTAGCAGCCGTGCCCATGTTTTATCAATATGTGCAATGGTTAATGAAAAAGCCCGTGGTCGTGTTCCAATATGGCCGACTTTTGTAGTCATAGCGGATAAATTTAGTGGGCTTATTCAACGAGTACTGCATATTCTACTTGATGAATCCCCACAGATACTGACGGTTAACCCACTACTCACTGAGATCAATACAAGGTCTAAAGATGATGATAATGATGGGAAAGACAAAAACCAAACGTCCGACGAGTCGTCGAATCCAGTACAACAGAAAAAATGTATTCTGGAGCATATAGTTCTTATCATTTTCTTATCACATTGTTTTACAAATTTGGCTGAAGTTGGTGTATTACGACGTAGTCTTCGTGAATTATATAGCCTAGCCATTTGGCAAGATCATCTTCAGCCGACTCGTTTAAGTCTTGA-ACTAAAATCACATCCACGATATGCTCGCTTATTAAAAAAATTACAAAAATATCGTGATACAAAAGTTTCCCCTACTGAACGAGATAATATGGTATTTCAGCATTCATTTATTCCACGAATTTTGGATGTGTTT-TTAACTCTGTTGA]

[+] EMBL CD121428             [CAGATACATACAGACCTTTTCAACCAAATGTGATGGAACGGATTTATCGTCAGGAATTGCTGGCCTCTGGATTTTCACATCGCCGATGTCTAGCTCTTGAATTGAATCAGTATTTAGAGCAATGGCTTTGGCCACATTTTGAACCAGATACTAGCAGCCGTGCCCATGTTTTATCAATATGTGCAATGGTTAATGAAAAAGCCCGTGGTCGTGTTCCAATATGGCCGACTTTTGTAGTCATAGCGGATAAATTTAGTGGGCTTATTCAACGAGTACTGCATATTCTACTTGATGAATCCCCACAGATACTGACGGTTAACCCACTACTCACTGAGATCAATACAAGGTCTAAAGATGATGATAATGATGGGAAAGACAAAAAACAAACGTCCGACGAGTCGTCGAATCCAGTACAACAGAAAAAATGTATTCTGGAGCATATAGTTCTTATCATTTTCTTATCACATTGTTTTACAAATTTGGCTGAAG                                                                                                                                                                                                                                         ]
[+] EMBL CD121433             [CAGATACATACAGACCTTTTCAACCAAATGTGATGGAACGGATTTATCGTCAGGAATTGCTGGCCTCTGGATTTTCACATCGCCGATGTCTAGCTCTTGAATTGAATCAGTATTTAGAGCAATGGCTTTGGCCACATTTTGAACCAGATACTAGCAGCCGTGCCCATGTTTTATCAATATGTGCAATGGTTAATGAAAAAGCCCGTGGTCGTGTTCCAATATGGCCGACTTTTGTAGTCATAGCGGATAAATTTAGTGGGCTTATTCAACGAGTACTGCATATTCTACTTGATGAATCCCCACAGATACTGACGGTTAACCCACTACTCACTGAGGTCAATACAAGGTCTAAAGATGATGATTATGATGGGAAAGACAAAAACCAAACGTCCGACGAGT                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD121484             [CAGATGCATACAGACCTTTTCAACCAAATGTGATGGAACGGATTTATCGTCAGGAATTGCTGGCCTCTGGATTTTCACATCGCCGATGTCTAGCTCTTGAATTGAATCAGTATTTAGAGCAATGGCTTTGGCCACATTTTGAACCAGATACTAGCAGCCGTGCCCATGTTTTATCAATATGTGCAATGGTTAATGAAAAAGCCCGTGGTCGTGTTCCAATATGGCCGACTTTTGTAGTCATAGCGGATAAATTTAGTGGGCTTATTCAACGAGTACTGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD121448             [                                                                                                                                                                                                                                                   CGGATAAATTTAGTGGGCTTATTCAACGAGTACTGCATATTCTACTTGATGAATCCCCACAGATACTGACGGTTAACCCACTACTCACTGAGATCAATACAAGGTCTAAAGATGATGATAATGATGGGAAAGACAAAAACCAAACGTCCGACGAGTCGTCGAATCCAGTACAACAGAAAAAATGTATTCTGGAGCATATAGTTCTTATCATTTTCTTATCACATTGTTTTACAAATTTGGCTGAAGTTGGTGTATTACGACGTAGTCTTCGTGAATTATATAGCCTAGCCATTTGGCAAGATCATCTTCAGCCGACTCGTTTAAGTCTTGACACTAAAATCACATCCGCGATATGCTCGCTTATTAAAAAAATTACAAAAATATCGTGATACAAAAGTTTCCCCTACTGAACGAGATAATATGGTATTTCAGCATTCATTTATTCCACGAATTTTGGATGTGTTT TTAACTCTGTTGA]
[-] EMBL CD121457             [                                                                                                                                                                                                                                                     aATAAATTTAGTGGGCTTATTCAACGAGTACTGCATATTCTACTTGATGAATCCCCACAGATACTGACGGTTAACCCACTACTCACTGAGATCAATACAAGGTCTAAAGATGATGATAATGATGGGAAAGACAAAAACCAAACGTCCGACGAGTCGTCGAATCCAGTACAACAGAAAAAATGTATTCTGGAGCATATAGTTCTTATCATTTTCTTATCACATTGTTTTACAAATTTGGCTGAAGTTGGTGTATTACGACGTAGTCTTCGTGAATTATATAGCCTAGCCATTTGGCAAGATCATCTTCAGCCGACTCGTTTAAGTCTTGA ACTAAAATCACATCCACGATATGCTCGCTTATTAAAAAAATTACAAAAATATCGTGATACAAAAGTTTCCCCTACTGAACGAGATAATATGGTATTTCAGCATTCATTTATTCCACGAATTTTGGATGTGTTT TTAACTCTGTTGA]
[-] EMBL CD121485             [                                                                                                                                                                                                                                                                               AGTACTGCATATTCTACTTGATGAATCCCCACAGATACTGACGGTTAACCCACTACTCACTGAGATCAATACAAGGTCTAAAGATGATGATAATGATGGGAAAGACAAAAACCAAACGTCCGACGAGTCGTCGAATCCAGTACAACAGAAAAAATGTATTCTGGAGCATATAGTTCTTATCATTTTCTTATCACATTGTTTTGCAAATTTGGCTGAAGTTGGTGTATTACGACGTAGTCTTCGTGAATTATATAGCCTAGCCATTTGGCAAGATCATCTTCAGTCGACTCGTTTAAGTCTTGA ACTAAAATCACATCCACGATATGCTCGCTTATTAAAAAAATTACAAAAATATCGTGATACAAAAGTTTCCCCTACTGAACGAGATAATATGGTGTTTCAGCATTCATTTATTCCACGAATTTTGGATGTGTTTCTTAACTCTGTTGA]
[-] EMBL CD121480             [                                                                                                                                                                                                                                                                                   CTGCATATTCTACTTGATGAATCCCCACAGATACTGACGGTTAACCCACTACTCACTGAGATCAATACAAGGTCTAAAGATGATGATAATGATGGGAAAGACTAAAACCGAACGTCCGACGAGTCGTCGAATCCAGTACAACAGAAAAAATGTATTCTGGAGCATATAGTTCTTATCATTTTCTTATCACATTGTTTTACAAATTTGGCTGAAGATGGTGTATTACGACGTAGTCTTCGTGAATTATATAGCCTAGCCATTTGGCAAGATCATCTTCAGCCGACTCGTTTAAGTCTTGA ACTAAAATCACATCCACGATATGCTCGCTTATTAAAAAAATTACAAAAATATCGTGATACAAAAGTTTCCCCTACTGAACGAGATAATATGGTATTTCAGCATTCATTTATTCCACGAATTTTGGATGTGTTT TTAACTCTGTTGA]
[-] EMBL CD121463             [                                                                                                                                                                                                                                                                                            CTACTTGATGAATCCCCGCAGATATTGACGGTTAACCCACTACTCACTGAGATCAATACAAGGTCTAAAGATGATGATAATGATGGGAAAGACAAAAACCAAACGTCCGACGAGTCGTCGAATCCAGTACAACAGAAAAAATGTATTCTGGAGCATATAGTTCTTATCATTTTCTTATCACATTGTTTTACAAATTTGGCTGAAATTGGTGTATTACGACGTAGTCTTCGTGAATTATATAGCCTAGCCATTTGGCAAGATCATCTTCAGCCGACTCGTTTAAGTCTTGA ACTAAAATCACATCCACGATATGCTCGCTTATTAAAAAAATTACAAAAATATCGTGATACAAAAGTTTCCCCTACTGAACGAGATAATATGGTGTTTCAGCATTCATTTATTCCACGAATTTTGGATGTGTTT TTAACTCTGTTGA]
[-] EMBL CD121486             [                                                                                                                                                                                                                                                                                                              CAGATACTGACGGTTAACCCACTACTCACTGAGATCAATACAAGGTCTAAAGATGATGATAATGATGGGAAAGACAAAAACCAAACGTCCGACGAGTCGTCGAATCCAGTACAACAGAAAAAATGTATTCTGGAGCATATAGTTCTTATCATTTTCTTATCACATTGTTTTACAAATTTGGCTGAAGTTGGTGTATTACGACGTAGTCTTCGTGAATTATATAGCCTAGCCATTTGGCAAGATCATCTTCAGCCGACTCGTTTAAGTCTTGA ACTAAAACCACATCCACGATATGCTCGCTTATTAAAAAAATTACAAAAATATCGTGATACAAAAGTTTCCCCTACTGAACGAGATAATATGGTATTTCAGCATTCATTTATTCCACGAATTTTGGATGTGTTT TTAACTCTGTTGA]
[-] EMBL CD121469             [                                                                                                                                                                                                                                                                                                                 ATATTGACGGTTAACCCACTACTCACTGAGATCAATACAAGGTCTAAAGATGATGATAATGATGGGAAAGACAAAAACCAAACGTCCGACGAGTCGTCGAATCCAGTACAACAGAAAAAATGTATTCTGGAGCATATAGTTCTTATCATTTTCTTATCACATTGTTTTACAAATTTGGCTGAAGTTGGTGTATTACGACGTAGTCTTCGTGAATTATATAGCCTAGCCATTTGGCAAGATCATCTTCAACCGACTCGTTTAAGTCTTGA ACTAAAATCACATCCACGATATGCTCGCTTATTAAAAAAATTACAAAAATATCGTGATACAAAAGTTTCCCCTACTGAACGAGATAATATGGTATTTCAGCATTCATTTATTCCACGAATTTTGGATGTGTTT TTAACTCTGTTGA]
[-] EMBL CD121443             [                                                                                                                                                                                                                                                                                                                                                       AAGGTCTAAAGATGATGATAATGATGGGAAAGACAAAAACCAAACGTCCGACGAGTCGTCGAATCCAGTACAACAGAAAAAATGTATTCTGGAGCATATAGTTCTTATCAGTTTCTGATCACATTGTTTCACAAATTTGGCTGAAGTTGGTGTATTACGACGTAGTCTTCGTGAATTATATAGCCTAGCCATTTGGCAAGATCATCTTCAGCCGACTCGTTTAAGTCTTGA ACTAAAATCACATCCACGATATGCTCGCTTATTAAAAAAATTACAAAAATATCGTGATACAAAAGTTTCCCCTACTGAACGAGATAATATGGTATTTCAGCATTCATTTATTCCACGAATTTTGGATGTGTTT TTAACTCTGTTGA]


>consensus_9721#0 CAGATACATACAGACCTTTTCAACCAAATGTGATGGAACGGATTTATCGTCAGGAATTGC TGGCCTCTGGATTTTCACATCGCCGATGTCTAGCTCTTGAATTGAATCAGTATTTAGAGC AATGGCTTTGGCCACATTTTGAACCAGATACTAGCAGCCGTGCCCATGTTTTATCAATAT GTGCAATGGTTAATGAAAAAGCCCGTGGTCGTGTTCCAATATGGCCGACTTTTGTAGTCA TAGCGGATAAATTTAGTGGGCTTATTCAACGAGTACTGCATATTCTACTTGATGAATCCC CACAGATACTGACGGTTAACCCACTACTCACTGAGATCAATACAAGGTCTAAAGATGATG ATAATGATGGGAAAGACAAAAACCAAACGTCCGACGAGTCGTCGAATCCAGTACAACAGA AAAAATGTATTCTGGAGCATATAGTTCTTATCATTTTCTTATCACATTGTTTTACAAATT TGGCTGAAGTTGGTGTATTACGACGTAGTCTTCGTGAATTATATAGCCTAGCCATTTGGC AAGATCATCTTCAGCCGACTCGTTTAAGTCTTGAACTAAAATCACATCCACGATATGCTC GCTTATTAAAAAAATTACAAAAATATCGTGATACAAAAGTTTCCCCTACTGAACGAGATA ATATGGTATTTCAGCATTCATTTATTCCACGAATTTTGGATGTGTTTTTAACTCTGTTGA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)