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Schistosoma mansoni
cluster # 9734 cluster # 9734       Sequences # 11       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9734#0 length = 1008 sequences # 11  

consensusID : consensus_9734#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1008
fasta sequence
                              [GAGGCCAGAATTCGGCACGGGCGTGTAGTACTTGAAAAAGCAACTGGTGTTGCTTTTATGCATGTTGAAGATTTAGCCGCTATATGGTGTGAATGGGCTGAAATGGAAATGCGTCATGATCAACCTGAAGCAGCACTTCGTTTATTAGGGAAAGCTACTACTGCACCATCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAAAAAGGTGTTGCATTATTTCGTTGGCCAAATGTTTACGATATATGGGCTACTTATTTATCTAAGTTTATTGAACGTTACGGTGGAAATAAATTAGAACGTGCTCGTGATTTATTTGAACAATGTTTAGAGAAATGTCCACCGAAATATGCTAAAGCGTTACATTTATTGTATGCTCGACTTGAAGAACAACATGGACTTGCGCGTCGTGCTATTCGTATATATGAACGAGCTACAGAAGCTGTTCTTCCAGAAGAAAGATTTGAAATGTTCAATATCTATATTCAACGTATTGCCGATCTTCATGGTGTTACGCATACACGTTCAGCTTATGAACAAGCAATAGAACGTTTACCTGAAGAACATTCGCGTAAAATGTGTTTAAGGTTTGCTGATCTTGAAAGAAAATTAGGTGAAATTGACCGAGCACGAGCTGTTTATGCCTATTGTGCACAATATGTGTGATCCTCGAACCGAAACACAATTTTGGCAAATATGGAAAGAATTTGAAGTAACCCATGGTAATGAAGATACTCTACGTGAAATGTTACGAATTCGACGTAGTGTTCAAGCAACTTATAATACACGTGTTAGTTTTGTTGCAAG]

[+] EMBL CD079428             [GAGGCCAGAATTCGGCACGGGCGTGTAGTACTTGAAAAAGCAACTGGTGTTGCTTTTATGCATGTTGAAGATTTAGCCGCTATATGGTGTGAATGGGCTGAAATGGAAATGCGTCATGATCAACCTGAAGCAGCACTTCGTTTATTAGGGAAAGCTACTACTGCACCATCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAAAAAGGTGTTGCATTATTTCGTTGGCCAAATGTTTACGATATATGGGCTACTTATTTATCTAAGTTTATTGAACGTTACGGTGGAAATAAATTAGAACGTGCTCGTGATTTATTTGAACAATGTTTAGAGAAATGTCCACCGAAATATGCTAAAGCGTTACATTTATTGTATGCTCGACTTGAAGAACAACATGGACTTGCGCGTCGTGCTATTCGTATATATGAACGAGCTACAGAAGCTGTTCTTCCAGAAGAAAGATTTGAAATGTTCAATATCTATATTCAACGTATTGCCGATCTTCATGGTGTTACGCATAC                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD120459             [                                                                                                                                                            ACTACTGCACCATCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAAAAAGGTGTTGCATTATTTCGTTGGCCAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD120149             [                                                                                                                                                            ACTACTGCACCATCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGAAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATACGAAAAAGGTGTTGCATTATTTCGTTGGCCAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD120044             [                                                                                                                                                            ACTACTGCACCCTCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAAAAAGGTGTTGCATTATTTCGTTGGCCAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD120101             [                                                                                                                                                            ACTACTGCACCATCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAATAAGGTGTTGCATTATTTCGTTGGCCAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD120496             [                                                                                                                                                            ACTACTGCACCATCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAAAAAGGTGTTGCATTATTTCGTTGGCCAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD120102             [                                                                                                                                                             CTACTGCACCATCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAAAAAGGTGTTGCATTATTTCGTTGGCCAAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD120443             [                                                                                                                                                             CTACTGCACCATCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAAAAAGGTGTTGCATTATTTCGTTGGCCAAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD120056             [                                                                                                                                                             CTACTGCACCATCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAACCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAAAAAGGTGTTGCATTATTTCGTTGGCCAAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL BG930741             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCGTGCTATTCGTATATATGAACGAGCTACAGAAGCTGCTCTTCCAGAAGAAAGATTTGAAATGTTCAATATCTATATTCAACGTATTGCCGATCTTCATGGTGTTACGCATACACGTTCAGCTTATGAACAAGCAATAGAACGTTTACCTGAAGAACATTCGCGTAAAATGTGTTTAAGGTTTGCTGATCTTGAAAGAAAATTAGGTGAAATTGAC                                                                                                                                                                                       ]
[+] EMBL CD127045             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCAACGTATTGCCGATCTTCATGGTGTTACGCATACACGTTCAGCTTATGAACAAGCAATAGAACGTTTACCTGAAGAACATTCGCGTAAAATGTGTTTAAGGTTTGCTGATCTTGAAAGAAAATTAGGTGAAATTGATCGAGCACGAGCTGTTTATGCCTATTGTGCACAATATGTGTGATCCTCGAACCGAAACACAATTTTGGCAAATATGGAAAGAATTTGAAGTAACCCATGGTAATGAAGATACTCTACGTGAAATGTTACGAATTCGACGTAGTGTTCAAGCAACTTATAATACACGTGTTAGTTTTGTTGCAAG]


>consensus_9734#0 GAGGCCAGAATTCGGCACGGGCGTGTAGTACTTGAAAAAGCAACTGGTGTTGCTTTTATG CATGTTGAAGATTTAGCCGCTATATGGTGTGAATGGGCTGAAATGGAAATGCGTCATGAT CAACCTGAAGCAGCACTTCGTTTATTAGGGAAAGCTACTACTGCACCATCACGTAAAGTC GATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGG TCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTAT GATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTC CTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAAAAAGGTGTTGCATTA TTTCGTTGGCCAAATGTTTACGATATATGGGCTACTTATTTATCTAAGTTTATTGAACGT TACGGTGGAAATAAATTAGAACGTGCTCGTGATTTATTTGAACAATGTTTAGAGAAATGT CCACCGAAATATGCTAAAGCGTTACATTTATTGTATGCTCGACTTGAAGAACAACATGGA CTTGCGCGTCGTGCTATTCGTATATATGAACGAGCTACAGAAGCTGTTCTTCCAGAAGAA AGATTTGAAATGTTCAATATCTATATTCAACGTATTGCCGATCTTCATGGTGTTACGCAT ACACGTTCAGCTTATGAACAAGCAATAGAACGTTTACCTGAAGAACATTCGCGTAAAATG TGTTTAAGGTTTGCTGATCTTGAAAGAAAATTAGGTGAAATTGACCGAGCACGAGCTGTT TATGCCTATTGTGCACAATATGTGTGATCCTCGAACCGAAACACAATTTTGGCAAATATG GAAAGAATTTGAAGTAACCCATGGTAATGAAGATACTCTACGTGAAATGTTACGAATTCG ACGTAGTGTTCAAGCAACTTATAATACACGTGTTAGTTTTGTTGCAAG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)