These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9734#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1008 fasta sequence [GAGGCCAGAATTCGGCACGGGCGTGTAGTACTTGAAAAAGCAACTGGTGTTGCTTTTATGCATGTTGAAGATTTAGCCGCTATATGGTGTGAATGGGCTGAAATGGAAATGCGTCATGATCAACCTGAAGCAGCACTTCGTTTATTAGGGAAAGCTACTACTGCACCATCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAAAAAGGTGTTGCATTATTTCGTTGGCCAAATGTTTACGATATATGGGCTACTTATTTATCTAAGTTTATTGAACGTTACGGTGGAAATAAATTAGAACGTGCTCGTGATTTATTTGAACAATGTTTAGAGAAATGTCCACCGAAATATGCTAAAGCGTTACATTTATTGTATGCTCGACTTGAAGAACAACATGGACTTGCGCGTCGTGCTATTCGTATATATGAACGAGCTACAGAAGCTGTTCTTCCAGAAGAAAGATTTGAAATGTTCAATATCTATATTCAACGTATTGCCGATCTTCATGGTGTTACGCATACACGTTCAGCTTATGAACAAGCAATAGAACGTTTACCTGAAGAACATTCGCGTAAAATGTGTTTAAGGTTTGCTGATCTTGAAAGAAAATTAGGTGAAATTGACCGAGCACGAGCTGTTTATGCCTATTGTGCACAATATGTGTGATCCTCGAACCGAAACACAATTTTGGCAAATATGGAAAGAATTTGAAGTAACCCATGGTAATGAAGATACTCTACGTGAAATGTTACGAATTCGACGTAGTGTTCAAGCAACTTATAATACACGTGTTAGTTTTGTTGCAAG] [+] EMBL CD079428 [GAGGCCAGAATTCGGCACGGGCGTGTAGTACTTGAAAAAGCAACTGGTGTTGCTTTTATGCATGTTGAAGATTTAGCCGCTATATGGTGTGAATGGGCTGAAATGGAAATGCGTCATGATCAACCTGAAGCAGCACTTCGTTTATTAGGGAAAGCTACTACTGCACCATCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAAAAAGGTGTTGCATTATTTCGTTGGCCAAATGTTTACGATATATGGGCTACTTATTTATCTAAGTTTATTGAACGTTACGGTGGAAATAAATTAGAACGTGCTCGTGATTTATTTGAACAATGTTTAGAGAAATGTCCACCGAAATATGCTAAAGCGTTACATTTATTGTATGCTCGACTTGAAGAACAACATGGACTTGCGCGTCGTGCTATTCGTATATATGAACGAGCTACAGAAGCTGTTCTTCCAGAAGAAAGATTTGAAATGTTCAATATCTATATTCAACGTATTGCCGATCTTCATGGTGTTACGCATAC ] [+] EMBL CD120459 [ ACTACTGCACCATCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAAAAAGGTGTTGCATTATTTCGTTGGCCAAAT ] [+] EMBL CD120149 [ ACTACTGCACCATCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGAAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATACGAAAAAGGTGTTGCATTATTTCGTTGGCCAAAT ] [+] EMBL CD120044 [ ACTACTGCACCCTCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAAAAAGGTGTTGCATTATTTCGTTGGCCAAAT ] [+] EMBL CD120101 [ ACTACTGCACCATCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAATAAGGTGTTGCATTATTTCGTTGGCCAAAT ] [+] EMBL CD120496 [ ACTACTGCACCATCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAAAAAGGTGTTGCATTATTTCGTTGGCCAAAT ] [-] EMBL CD120102 [ CTACTGCACCATCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAAAAAGGTGTTGCATTATTTCGTTGGCCAAATG ] [-] EMBL CD120443 [ CTACTGCACCATCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAATCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAAAAAGGTGTTGCATTATTTCGTTGGCCAAATG ] [-] EMBL CD120056 [ CTACTGCACCATCACGTAAAGTCGATTATTATGATCGTTCCGAACCTGTTCAAGCACGACTTCATAAACCTTTGCGTCTTTGGTCGTTGTACACAGATTTAGAAGAAAGTTTTGGTACATTTGAAACAACAAAGGCTGCCTATGATCGAATGATTGATTTACGTATAGCAACTCCTCAAATTATTATGAATTATGCTTTATTCCTGGAAGAGTTAAATTATTTTGAAGATGCTTTTAAAGCATATGAAAAAGGTGTTGCATTATTTCGTTGGCCAAATG ] [-] EMBL BG930741 [ TCGTGCTATTCGTATATATGAACGAGCTACAGAAGCTGCTCTTCCAGAAGAAAGATTTGAAATGTTCAATATCTATATTCAACGTATTGCCGATCTTCATGGTGTTACGCATACACGTTCAGCTTATGAACAAGCAATAGAACGTTTACCTGAAGAACATTCGCGTAAAATGTGTTTAAGGTTTGCTGATCTTGAAAGAAAATTAGGTGAAATTGAC ] [+] EMBL CD127045 [ TCAACGTATTGCCGATCTTCATGGTGTTACGCATACACGTTCAGCTTATGAACAAGCAATAGAACGTTTACCTGAAGAACATTCGCGTAAAATGTGTTTAAGGTTTGCTGATCTTGAAAGAAAATTAGGTGAAATTGATCGAGCACGAGCTGTTTATGCCTATTGTGCACAATATGTGTGATCCTCGAACCGAAACACAATTTTGGCAAATATGGAAAGAATTTGAAGTAACCCATGGTAATGAAGATACTCTACGTGAAATGTTACGAATTCGACGTAGTGTTCAAGCAACTTATAATACACGTGTTAGTTTTGTTGCAAG] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||