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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9735#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 920 fasta sequence
[CGGCTCACGGAACTTGGCTCATCACTTATCAA--TTAGAATCAGAGGGTGGAACAGTATGCTCTTTTTCAATATGATCTCTCAGATCAAACGCACAAGAGAACATCTGATTACAA-ACGGAACATTGTGTAGTGTCTGCTGTGTCTAGGCAAGCTTGTGAAGCCTCATCAACATGACCAAGAATATGAGACATTAATTTTGTATTTGAGTAGAAAATTCGTTGACAAACCGCACATTTGAATCTGAAATCACCCTTTTCCTCCACGTAATCGGTGTTTCCATCTTGACGCCCAAAATAATACTCGTCAATTGGAATGTACTTAACTCCTTTACCATCTTTACCCGGCTTTTTAACTGATAAGCCCTTCAACGATT-GAACTATTTCAATGCTTCCTTCTGGACCAGAATTTATGATA-TT-GA-CTTCTGGTTCTGGAACATCTTCATCTACATCTGCAGCATTGCGAAAAACAATAGTAGGCGGTAAGAAAGTTCGTAGTGGCCGGACAGAACCATGGAGTTTTGCTCGTTCACCCTCAACAAAGCATTCTGAAATATGGACTGCAGGCCAGTCAGACCGAATAGGTTTTTCGGAATCTAAAAACTCATCAGGAATAGGAACATGAGCCTTAACTATGGCTACTTCACCCTCTTCAGAAATAGGAAATTCCCAATTATTTTGCTGCAGCGTATTATACACAGATATCGCTCCGGCATGTTGAAGTGCGTTTAAGGACTCCCCAGTTAGTAAACCATGCTCTCCTATCGTGACAGCCTCCTCTGTCACGCATACATTGCTACAAAGCGCAAGGCGACTGACTGCATCCAAAAATGTGCGGTATTCTTGTAGGCGTGTTTGATAAGCCTTTAGTTGTGCATCTGATAAAGATTCATCATCACAAATGAGTGATAATGTAGCANAACAT]
[+] EMBL CD065782 [CGGCTCACGGAACTTGGCTCATCACTTATCAA TTAGAATCAGAGGGTGGAACAGTATGCTCTTTTTCAATATGATCTCTCAGATCAAACGCACAAGAGAACATCTGATTACAA ACGGAACATTGTGTAGTGTCTGCTGTGTCTAGGCAAGCTTGTGAGGCCTCATCAACATGACCAAGAATATGAGACATTAATTTTGTATTTGAGTAGAAAATTCGTTGACAAACCGCACATTTGAATCTGAAATCACCCTTTTCCTCCACGTAATCGGTGTTTCCATCTTGACGCCCAAAATAATACTCGTCAATTGGAATGTACTTAACTCCTTTACCATCTTTACCCGGCTTTTTAACTGATAAGCCCTTCAACGATT GAACTATTTCAATGCTTCCTTCTGGACCAGAATTTATGATA TT GA CTTCTGGTTCTGGAACATCTTCATCTACATCTGCAGCATTGCGAAAAACAATAGT ]
[+] EMBL CD065741 [ acgTTATCAAAGTTAGAATCAGAGGGTGGAACAGTATGCTCTTTTTCAATATGATCTCTCAGATCAAACGCACAAGAGAACATCTGATTACAACACGGAACATTGTGTAGTGTCTGCTGTGTCTAGGCTAGCTTGTGAGGCCTCATCAACATGACCAAGAATATGAGACATGAATTTTGTATTTGAGTAGAAAATTCGTTGACAAACCGCACATATGAATCTGAAATCACCCTTTTCCTCCACGTAATCGGAGTTTCCATCTTGACGCCCAAAATAATACTCGTCAATTGGAATGTACTTAACTCCTTTAGCATCTGTACCCGGCTTTTTAACTGATAAGCCCTTCAACGATTGGAACTATTTCAATGCTTCCTTCTGGACCAGAATTTATGATA TT GA CTTCTGGTTCTGGAACATCTTCATCTACATCTGCAGCATTGCGAAAAACAATAGT ]
[+] EMBL CD128275 [ CTGC GTGTCTAGGCAAGCTTGTGAAGCCTCATCAACATGACCAAGAATATGAGACATTAATTTTGTATTTGAGTAGAAAATTCGTTGACAAACCGCACATTTGAATCTGAAATCACCCTTTTCCTCCACGTAATCGGTGTTTCCATCTTGACGCCCAAAATAAAACTCGTCAATTGGAATGTACTTAACTCCTTTACCATCTTTACCCGGCTTTTTAACTGATAAGCCCTTCAACGATT GAACTATTTCAATGCTTCCTTCTGGACCAGAATTTATGATA TT GA CTTCTGGTTCTGGAACATCTTCATCTACATCTGCAGCATTGCGAAAAACAATAGT ]
[-] EMBL CD065583 [ TGCTGTGTCTAGGCAAGCTTGTGAAGCCTCATCAACATGACCAAGAATATGAGACATTAATTTTGTACTTGAGTAGAAAATTCGTTGACAAACCGCACATTTGAATCTGAAATCACCCTTTTCCTCCACGTAATCGGTGTTTCCATCTTGACGCCCAAAATAATACTCGTCAATTGGAATGTACTTAACTCCTTTACCATCTTTACCCGGCTTTTTAACTGATAAGCCCTTCAACGATT GAACTATTTCAATGCTTCCTTCTGGACCAGAATTTATGATACTTCGAGCTTCTG ]
[-] EMBL CD128349 [ TGCTGTGTCTAGGCAAGCTTGTGAAGCCTCATCAACATGACCAAGAATATGAGACATTAATTTTGTATTTGAGTAGAAAATTCGTTGACAAACCGCACATTTGAATCTGAAATCACCCTTTTCCTCCACGTAATCGGTGTTTCCATCTTGACGCCCAAAATAATACTCGTCAATTGGAATGTACTTAACTCCTTTACCATCTTTACCCGGCTTTTTAACTGATAAGCCCTTCAACGATT GAACTATTTCAATGCTTCCTTCTGGACCAGAATTTATGATA TT GA CTTCTGGTTCTGGAACATCTTCATCTACATCTGCAGCATTGCGAAAAAC ATAGTA ]
[-] EMBL CD065556 [ TGCTGTGTCTAGGCAAGCTTGTGAAGCCTCATCAACATGACCAAGAATATGAGACATTAATTTTGTATTTGAGTAGAAAATTCGTTGACAAACCGCACATTTGAATCTGAAATCACCCTTTTCCTCCACGTAATCGGTGTTTCCATCTTGACGCCCAAAATAATACTCGTCAATTGGAATGTACTTAACTCCTTTACCATCTTTACCCGGCTTTTTAACTGATAAGCCCTTCAACGATT GAACTATTTCAATGCTTCCTTCTGGACCAGAATTTATGATA TT GA CTTCTGGTTCTGGAACATCTTCATCTACATCTGCAGCATTGCGAAAAAC ATAGTA ]
[+] EMBL CD128525 [ ctgGTGTCTAGGCAAGCTTGTGAAGCCTCATCAACATGACCAAGAATATGAGACATTAATTTTGTATTTGAGTAGAAAATTCGTTGACAAACCGCACATTTGAATCTGAAATCACCCTTTTCCTCCACGTAATCGGTGTTTCCATCTTGACGCCCAAAATAATACTCGTCAATTGGAATGTACTTAACTCCTTTACCATCTTTACCCGGCTTTTTAACTGATAAGCCCTTCAACGATT GAACTATTTCAATGCTTCCTTCTGGACCAGAATTTATGATA TT GA CTTCTGGTTCTGGAACATCTTCATCTACATCTGCAGCATTGCGAAAAACAATAGT ]
[+] EMBL CD190192 [ TTCGTTGACAAACCGCACATTTGAATCTGAAATCACCCTTTTCCTCCACGTAATCGGTGTTTCCATCTTGACGCCCAAAATAATACTCGTCAATTGAAATGTACTTAACTCCTTTACCATCTTTACCCGGCTTTTTAACTGATAAGCCCTTCAACGATT GAACTATTTCAATGCTTCCTTCTGGACCAGAATTTATGATA TT GA CTTCTGGTTCTGGAACATATTCATCTACATCTGCAGCATTGCGAAAAACAATAGTAAGCGGTAAGAAAG ]
[+] EMBL CD190136 [ TTCGTTGACAAACCGCACATTTGAATCTGAAATCACCCTTTTCCTCCACGTAATCGGTGTTTCCATCTTGACGCCCAAAATAATACTCGTCAATTGGAATGTACTTAACTCCTTTACCATCTTTACCCGGCTTTTTAACTGATAAGCCCTTCAACGATT GAACTATTTCAATGCTTCCTTCTGGACCAGAATTTATGATA TT GA CTTCTGGTTCTGGAACATCTTCATCTACATCTGCAGCATTGCGAAAAACAATAGTAGGCGGTAAGAAAG ]
[+] EMBL CD156137 [ GTTTCCATCTTGACGCCCAAAATAATACTCGTCAATTGGAATGTACTTAACTCCTTTACCATCTTTACCCGGCTTTTTAACTGATAAGCCCTTCAACGATT GAACTATTTCAATGCTTCCTTCTGGACCAGAATTTATGATA TT GA CTTCTGGTTCTGGAACATCTTCATCTACATCTGCAGCATTGCGAAAAACAATAGTAGGCGGTAAGAAAGTTCGTAGTGGCCGGACAGAACCATGGAGTTTTGCTCGTTCACCCTCAACAAAGCATTCTGAAATATGGACTGCAGGCCAGTCAGACCGAATAGGTTTTTCGGAATCTAAA ]
[+] EMBL CD202727 [ AATTTATGATA TT GA CTTCTGGTTCTGGAACATCTTCATCTACATCTGCAGCATTGCGAAAAACAATAGTAGGCGGTAAGAAAGTTCGTAGTGGCCGGACAGAACCATGGAGTTTTGCTCGTTCACCCTCAACAAAGCATTCTGAAATATGGACTGCAGGCCAGTCAGACCGAATAGGTTTTTCGGAATCTAAAAACTCATCAGGAATAGGAACATGAGCCTTAACTATGGCTACTTCACCCTCTTCAGAAATAGGAAATTCCCAATTATTTTGCTGCAGCGTATTATACACAGATATCGCTCCGGCATGTTGAAGTGCGTTTAAGGACTCCCCAGTTAGTAAACCATGCTCTCCTATCGTGACAGCCTCCTCTGTCACGCATACATTGCTACAAAGCGCAAGGCGACTGACTGCATCCAAAAATGTGCGGTATTCTTGTAGGCGTGTTTGATAAGCCTTTAGTTGTGCATCTGATAAAGATTCATCATCACAAATGAGTGATAATGTAGCANAACAT]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||