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Schistosoma mansoni
cluster # 9740 cluster # 9740       Sequences # 11       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9740#0 length = 927 sequences # 11  

consensusID : consensus_9740#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 927
fasta sequence
                              [GGCACGCCGAGA--CATTTGAAATTGAAGCTGCTGAACAGCATTATAAA--CATCTTATTCTAAG-CCTTTCAGCCTATAACTGGATGCATGCAATTCAAATCGACAAAAAGTCACAA-CTTTGTCAACAAGATCCATGTATTTGCTTAACAAATGCTCTCAATTCAATCAAAGATGCTGCTGAATTAGGAGCTACTTCTGACGAAAATATATCGGAGATTTCAACAAACGCTATTGCCCGGTCAATCTATTACGTGGAAACTTTGAGATCAAGCGGTCTATCGTCCTGTTCATCGTTCTCACAGTGTGTGAATGTAGTCAGTGAACTAGAAAAGGCAATAAAACATGAAGAAAAACTAGTATCAGAGTTCACTGAGTTGGATCGGATAGTTTATTCAGTAAAGGACACATACGGTCTGAAGTGGCCGGTTCATGATTGGTTTCAATCATCATGTGTCAGTGATTCAGATGAAGTTATCAAAAGCAACTTACTTGAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCAGTCGACAAACTAAATCAACGCCTTTCATTTATAAAGGAAGAGTTCAATGAGATGGACTTGAAATCGGAGCCGTTAAACGATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACTGTTTCATTATCTTTTTGTTCTTCTGAAACATCTACTAACGCTAGACAACCTACAATGATAGCATCACTGCGATTTCAGCTCAGTACATTACAAAAGGAAAAATTGTCTGATATTCGACAGATCGTAAAAATTCTAAGCCGTTATGATTCTATTCGACTCAATTTACTACGTTCCGATCAGATGTCGCTCAGTGAAACATGTACTACATCCCTCTGGA]

[+] EMBL CD081169             [GGCACGCCGAGA  CATTTGAAATTGAATCTGCTGAACAGCATTATAAACCCATCTTATTCTAAGNCCTTTCAGCCTATAACTGGATGCATGCAATTCAAATCGACAAAAAGTCACAANCTTTGTCAACAAGATCCATGTATTTGCTTAACAAATGCTCTCAATTCAATCAAAGATGCTGCTGAATTAGGAGCTACTTCTGACGAAAATATATCGGAGATTT AACAAACGCTATTGCCCGGTCAATCTATTACGTGGAAACTTTGAGATCAAGCGGTCTATCGTCCTGTTCATCGTTCTCACAGTGTGTGAATGTAGTCAGTGAACTAGAAAAGGCATTAAAACATGAAGAAAAACTAGTATCAGAGTTCACTGAGTTGGATCGGATAGTTTATTCAGTAAAGGACACATACGGTCTGAAGTGGCCGGTTCATGATTGGTTTCAATCATCATGTGTCAGTGATTCAGATGAAGTTATCAAAAGCAACTTACTTGAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCAGTCGACAAACTAAATCAACGCCTTTCATTTATAAAGGAAGAGTTCAATGAGATGGACTTGAAATCGGAGCCGTTAAACGATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACTGTTTCATTATCTTTTTGTTCTTCTGAAACATCTACTAA                                                                                                                                                                                   ]
[+] EMBL CD082062             [    gttCGAGAACCATTTGAAATTGAAGCTGCTGAACAGCATT TTAA  CATCTTATTCTAAG CCTTTCAGCCTATAACTGGATGCATGCAATTCAAATCGACAAAAAGTCCCAA CTTTGTCAACAAGATCCATGTATTTGCTTAACAAATGCTCTCAATTCAATCAAAGATGCTGCTGAATTAGGAGCTACTTCTGACGAAAATATATCGGAGATTTCAACAAACGCTATTGCCCGGTCAATCTATTACGTGGAAACTTTGAGATCAAGCGGTCTATCGTCCTGTTCATCGTTCTCACAGTGTGTGAATGTAGTCAGTGAACTAGAAAAGGCAATAAAACATGAAGAAAAACTAGTATCAGAGTTCACTGAGTTGGATCGGATAGTTTATTCAGTAAAGGACACATACGGTCTGAAGTGGCCGGTTCATGATTGGTTTCAATCATCATGTGTCAGTGATTCAGATGAAGTTATCAAAAGCAACTTACTTGAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCAGTCGACAAACTAAATCAACGCCTTTCATTTATAAAGGAAGAGTTCAATGAGATGGACTTGAAATCGGAGCCGTTAAACGATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTnc                                                                                                                                                                                                                                         ]
[+] EMBL CD083736             [      agGAGA  CATTTGAAATTGAAGCTGCTGAACAGCATTATAAA  CATCTTATTCTAAG CCTTTCAGCCTATAACTGGATGCATGCAATTCAAATCGACAAAAAGTCACAA CTTTGTCAACAAGATCCATGTATTTGCTTAACAAATGCTCTCAATTCAATCAAAGATGCTGCTGAATTAGGAGCTACTTCTGACGAAAATATATCGGAGATTTCAACAAACGCTATTGCCCGGTCAATCTATTACGTGGAAACTTTGAGATCAAGCGGTCTATCGTCCTGTTCATCGTTCTCACAGTGTGTGAATGTAGTCAGTGAACTAGAAAAGGCAATAAAACATGAAGAAAAACTAGTATCAGAGTTCACTGAGTTGGATCGGATAGTTTATTCAGTAAAGGACACATACGGTCTGAAGTGGCCGGTTCATGATTGGTTTCAATCATCATGTGTCAGTGATTCAGATGAAGTTATCAAAAGCAACTTACTTGAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCAGTCGACAAACTAAATCAACGCCTTTC                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD074990             [          GA  CATTTGAAATTGAAGCTGCTGAACAGCATTATAAA  CATCTTATTCTAAG CCTTTCAGCCTATAACTGGATGCATGCAATTCAAATCGACAAAAAGTCACAA CTTTGTCAACAAGATCCATGTATTTGCTTAACAAATGCTCTCAATTCAATCAAAGATGCTGCTGAATTAGGAGCTACTTCTGACGAAAATATATCGGAGATTTCAACAAACGCTATTGCCCGGTCAATCTATTACGTGGAAACTTTGAGATCAAGCGGTCTATCGTCCTGTTCATCGTTCTCACAGTGTGTGAATGTAGTCAGTGAACTAGAAAAGGCATTAAAACATGAAGAAAAACTAGTATCAGAGTTCACTGAGTTGGATCGGATAGTTTATTCAGTAAAGGACACATACGGTCTGAAGTGGCCGGTTCATGATTGGTTTCAATCATCATGTGTCAGTGATTCAGATGAAGTTATCAAAAGCAACTTACTTGAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCAGTCGACAAACTAAATCAACGCCTTTCATTTATAAAGGAAGAGTTCAATGAGATGGACTTGAAATCGGAGCCGTTAAACGATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAGACCACAATCTTGTCGCTTAACAGCACTTCTTACCTCACAGCAAACTGTTTCATTATC TTTTGTTCTTCTGAAACATC                                                                                                                                                                                         ]
[-] EMBL CD075677             [                                                                                          TGCAATTCAAATCGACAAAAAGTCACAA CTTGNTCAACAAGATCCATGTA TTGCTTAACAAATGCTCTCAATTCAATCAAAGATGCTGCTGAATTAGGAGCTACTTCTGACGAAAATATATCGGAGATTTCAACAAACGCTATTGCCCGGTCAATCTATTACGTGGAAACTTTGAGATCAAGCGGTCTATCGTCCTGTTCATCGTTCTCACAGTGTGTGAATGTAGTCAGTGAACTAGAAAAGGCAATAAAACATGAAGAAAAACTAGTATCAGAGTTCACTGAGTTGGATCGGATAGTTTATTCAGTAAAGGACACATACGGTCTGAAGTGGCCGGTTCATGATTGGTTTCAATCATCATGTGTCAGTGATTCAGATGAAGTTATCAAAAGCAACTTACTTGAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCAGTCGACAAACTAAATCAACGCCTTTCATTTATAAAGGAAGAGTTCAATGAGATGGACTTGAAATCGGAGCCGTTAAACGATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACTGTTTCATTATCTTTTTGTTCTTCTGAAACATCTACAAACGCTAGACAGCCg                                                                                                                                                                      ]
[+] EMBL CD180233             [                                                                                                                                                                                                                                                                                                                                                                                                     GTTTATTCAGTAAAGGACACATACGGTCTGAAGTGGCCGGTTCATGATTGGTTTCAATCATCATGTGTCAGTGATTCAGATGAAGTTATCAAAAGCAACTTACTTGAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCAGTCGACAAACTAAATCAACGCCTTTCATTTATAAAGGAAGAGTTCAATGAGATGGACTTGAAATCGGAGCCGTTAAACGATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACCGTTTCATTATCTTTTTGTTCTTCTGAAACATCTACTAACGCTAGACAACCTACAATGATAGCATCACTGCGATTTCAGCTCAGTACATTACAAAAGGAAAAATTGTCTGATATTCGACAGATCGTAAAAATTCTAAGCCGTTA                                                                          ]
[-] EMBL CD119253             [                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCAATCATCATGTGTCAGTGATTCAGATGAAGTTATCAAAAGCAACTTACTTGAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCAGTCGACAAACTAAATCAACGCCTTTCATTTATAAAGGAAGAGTTCAATGAGATGGACTTGAAATCGGAGCCGTTAAACGATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACTGTTTCATTATCTTTTTGTTCTTCTGAAACATCTACTAACGCTAGACAACCTACAATGATAGCATCACTGCGATTTCAGCTCAGTACATTACAAAAGGAAAAATTGTCTGATATTCGACAGATCGTAAAAATTCTAAGCCGTTATGATTCTATTCGACTCAATTTACTACG                                               ]
[-] EMBL CD119087             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCGGTCGACAAACTAAATCAACGCCTTTCATTTATAAAGGAAGGGTTCAATGAGATGGACTTGAAATCGGAGCCGTTAAACGATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACTGTTTCATTATCTTTTTGTTCTTCTGAAACATCTACTAACGCTAGACAACCTACAATGATAGCATCACTGCGATTTCAGCTCAGTACATTACAAAAGGAAAAATTGTCTGATATTCGACAGATCGTAAAAATTCTAAGCCGTTATGATTCTATTCGACTCAATTTACTACG                                               ]
[-] EMBL CD180178             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAGTCGACAAACTAAATCAACGCCTTTCATTTATAAAGGAAGAGTTCAATGAGATGGACTTGAAATCGGAGCCGTTAAACGATGTTAGCTCTAATCGATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACTGTTTCATTATCTTTTTGTTCTTCTGAAACATCTACTAACGCTAGACAACCCACAATGATAGCATCA                                                                                                                                                       ]
[-] EMBL CD157416             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACTGTTTCATTATCTTTTTGTTCTTCTGAAACATCTACTAACGCTAGACAACCTACAATGATAGCATCACTGCGATTTCAGCTCAGTACATTACAAAAGGAAAAATTGTCTGATATTCGACAGATCGTAAAAATTCTAAGCCGTTATGATTCTATTCGACTCAATTTACTACGTTCCGATCAGATGTCGCTCAGTGAAACATGTACTACATCCCTCTGGA]
[-] EMBL CD157464             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGTTAGCTCTAATCAATCATGATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACTGTTTCATTATCTTTTTGTTCTTCTGAAACATCTACTAACGCTAGACAACCTACAATGATAGCATCACTGCGATTTCAGCTCAGTACATTACAAAAGGAAAAATTGTCTGATATTCGACAGATCGTAAAAATTCTAAGCCGTTATGATTCTATTCGACTCAATTTACTACGTTCCGATCAGATGTCGCTCAGTGAAACATGTACTACATCCCTCTGGA]


>consensus_9740#0 GGCACGCCGAGACATTTGAAATTGAAGCTGCTGAACAGCATTATAAACATCTTATTCTAA GCCTTTCAGCCTATAACTGGATGCATGCAATTCAAATCGACAAAAAGTCACAACTTTGTC AACAAGATCCATGTATTTGCTTAACAAATGCTCTCAATTCAATCAAAGATGCTGCTGAAT TAGGAGCTACTTCTGACGAAAATATATCGGAGATTTCAACAAACGCTATTGCCCGGTCAA TCTATTACGTGGAAACTTTGAGATCAAGCGGTCTATCGTCCTGTTCATCGTTCTCACAGT GTGTGAATGTAGTCAGTGAACTAGAAAAGGCAATAAAACATGAAGAAAAACTAGTATCAG AGTTCACTGAGTTGGATCGGATAGTTTATTCAGTAAAGGACACATACGGTCTGAAGTGGC CGGTTCATGATTGGTTTCAATCATCATGTGTCAGTGATTCAGATGAAGTTATCAAAAGCA ACTTACTTGAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCAGTCGACAAACTAA ATCAACGCCTTTCATTTATAAAGGAAGAGTTCAATGAGATGGACTTGAAATCGGAGCCGT TAAACGATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATC GCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACTGTTTCATTAT CTTTTTGTTCTTCTGAAACATCTACTAACGCTAGACAACCTACAATGATAGCATCACTGC GATTTCAGCTCAGTACATTACAAAAGGAAAAATTGTCTGATATTCGACAGATCGTAAAAA TTCTAAGCCGTTATGATTCTATTCGACTCAATTTACTACGTTCCGATCAGATGTCGCTCA GTGAAACATGTACTACATCCCTCTGGA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)