These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9740#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 927 fasta sequence [GGCACGCCGAGA--CATTTGAAATTGAAGCTGCTGAACAGCATTATAAA--CATCTTATTCTAAG-CCTTTCAGCCTATAACTGGATGCATGCAATTCAAATCGACAAAAAGTCACAA-CTTTGTCAACAAGATCCATGTATTTGCTTAACAAATGCTCTCAATTCAATCAAAGATGCTGCTGAATTAGGAGCTACTTCTGACGAAAATATATCGGAGATTTCAACAAACGCTATTGCCCGGTCAATCTATTACGTGGAAACTTTGAGATCAAGCGGTCTATCGTCCTGTTCATCGTTCTCACAGTGTGTGAATGTAGTCAGTGAACTAGAAAAGGCAATAAAACATGAAGAAAAACTAGTATCAGAGTTCACTGAGTTGGATCGGATAGTTTATTCAGTAAAGGACACATACGGTCTGAAGTGGCCGGTTCATGATTGGTTTCAATCATCATGTGTCAGTGATTCAGATGAAGTTATCAAAAGCAACTTACTTGAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCAGTCGACAAACTAAATCAACGCCTTTCATTTATAAAGGAAGAGTTCAATGAGATGGACTTGAAATCGGAGCCGTTAAACGATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACTGTTTCATTATCTTTTTGTTCTTCTGAAACATCTACTAACGCTAGACAACCTACAATGATAGCATCACTGCGATTTCAGCTCAGTACATTACAAAAGGAAAAATTGTCTGATATTCGACAGATCGTAAAAATTCTAAGCCGTTATGATTCTATTCGACTCAATTTACTACGTTCCGATCAGATGTCGCTCAGTGAAACATGTACTACATCCCTCTGGA] [+] EMBL CD081169 [GGCACGCCGAGA CATTTGAAATTGAATCTGCTGAACAGCATTATAAACCCATCTTATTCTAAGNCCTTTCAGCCTATAACTGGATGCATGCAATTCAAATCGACAAAAAGTCACAANCTTTGTCAACAAGATCCATGTATTTGCTTAACAAATGCTCTCAATTCAATCAAAGATGCTGCTGAATTAGGAGCTACTTCTGACGAAAATATATCGGAGATTT AACAAACGCTATTGCCCGGTCAATCTATTACGTGGAAACTTTGAGATCAAGCGGTCTATCGTCCTGTTCATCGTTCTCACAGTGTGTGAATGTAGTCAGTGAACTAGAAAAGGCATTAAAACATGAAGAAAAACTAGTATCAGAGTTCACTGAGTTGGATCGGATAGTTTATTCAGTAAAGGACACATACGGTCTGAAGTGGCCGGTTCATGATTGGTTTCAATCATCATGTGTCAGTGATTCAGATGAAGTTATCAAAAGCAACTTACTTGAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCAGTCGACAAACTAAATCAACGCCTTTCATTTATAAAGGAAGAGTTCAATGAGATGGACTTGAAATCGGAGCCGTTAAACGATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACTGTTTCATTATCTTTTTGTTCTTCTGAAACATCTACTAA ] [+] EMBL CD082062 [ gttCGAGAACCATTTGAAATTGAAGCTGCTGAACAGCATT TTAA CATCTTATTCTAAG CCTTTCAGCCTATAACTGGATGCATGCAATTCAAATCGACAAAAAGTCCCAA CTTTGTCAACAAGATCCATGTATTTGCTTAACAAATGCTCTCAATTCAATCAAAGATGCTGCTGAATTAGGAGCTACTTCTGACGAAAATATATCGGAGATTTCAACAAACGCTATTGCCCGGTCAATCTATTACGTGGAAACTTTGAGATCAAGCGGTCTATCGTCCTGTTCATCGTTCTCACAGTGTGTGAATGTAGTCAGTGAACTAGAAAAGGCAATAAAACATGAAGAAAAACTAGTATCAGAGTTCACTGAGTTGGATCGGATAGTTTATTCAGTAAAGGACACATACGGTCTGAAGTGGCCGGTTCATGATTGGTTTCAATCATCATGTGTCAGTGATTCAGATGAAGTTATCAAAAGCAACTTACTTGAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCAGTCGACAAACTAAATCAACGCCTTTCATTTATAAAGGAAGAGTTCAATGAGATGGACTTGAAATCGGAGCCGTTAAACGATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTnc ] [+] EMBL CD083736 [ agGAGA CATTTGAAATTGAAGCTGCTGAACAGCATTATAAA CATCTTATTCTAAG CCTTTCAGCCTATAACTGGATGCATGCAATTCAAATCGACAAAAAGTCACAA CTTTGTCAACAAGATCCATGTATTTGCTTAACAAATGCTCTCAATTCAATCAAAGATGCTGCTGAATTAGGAGCTACTTCTGACGAAAATATATCGGAGATTTCAACAAACGCTATTGCCCGGTCAATCTATTACGTGGAAACTTTGAGATCAAGCGGTCTATCGTCCTGTTCATCGTTCTCACAGTGTGTGAATGTAGTCAGTGAACTAGAAAAGGCAATAAAACATGAAGAAAAACTAGTATCAGAGTTCACTGAGTTGGATCGGATAGTTTATTCAGTAAAGGACACATACGGTCTGAAGTGGCCGGTTCATGATTGGTTTCAATCATCATGTGTCAGTGATTCAGATGAAGTTATCAAAAGCAACTTACTTGAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCAGTCGACAAACTAAATCAACGCCTTTC ] [-] EMBL CD074990 [ GA CATTTGAAATTGAAGCTGCTGAACAGCATTATAAA CATCTTATTCTAAG CCTTTCAGCCTATAACTGGATGCATGCAATTCAAATCGACAAAAAGTCACAA CTTTGTCAACAAGATCCATGTATTTGCTTAACAAATGCTCTCAATTCAATCAAAGATGCTGCTGAATTAGGAGCTACTTCTGACGAAAATATATCGGAGATTTCAACAAACGCTATTGCCCGGTCAATCTATTACGTGGAAACTTTGAGATCAAGCGGTCTATCGTCCTGTTCATCGTTCTCACAGTGTGTGAATGTAGTCAGTGAACTAGAAAAGGCATTAAAACATGAAGAAAAACTAGTATCAGAGTTCACTGAGTTGGATCGGATAGTTTATTCAGTAAAGGACACATACGGTCTGAAGTGGCCGGTTCATGATTGGTTTCAATCATCATGTGTCAGTGATTCAGATGAAGTTATCAAAAGCAACTTACTTGAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCAGTCGACAAACTAAATCAACGCCTTTCATTTATAAAGGAAGAGTTCAATGAGATGGACTTGAAATCGGAGCCGTTAAACGATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAGACCACAATCTTGTCGCTTAACAGCACTTCTTACCTCACAGCAAACTGTTTCATTATC TTTTGTTCTTCTGAAACATC ] [-] EMBL CD075677 [ TGCAATTCAAATCGACAAAAAGTCACAA CTTGNTCAACAAGATCCATGTA TTGCTTAACAAATGCTCTCAATTCAATCAAAGATGCTGCTGAATTAGGAGCTACTTCTGACGAAAATATATCGGAGATTTCAACAAACGCTATTGCCCGGTCAATCTATTACGTGGAAACTTTGAGATCAAGCGGTCTATCGTCCTGTTCATCGTTCTCACAGTGTGTGAATGTAGTCAGTGAACTAGAAAAGGCAATAAAACATGAAGAAAAACTAGTATCAGAGTTCACTGAGTTGGATCGGATAGTTTATTCAGTAAAGGACACATACGGTCTGAAGTGGCCGGTTCATGATTGGTTTCAATCATCATGTGTCAGTGATTCAGATGAAGTTATCAAAAGCAACTTACTTGAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCAGTCGACAAACTAAATCAACGCCTTTCATTTATAAAGGAAGAGTTCAATGAGATGGACTTGAAATCGGAGCCGTTAAACGATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACTGTTTCATTATCTTTTTGTTCTTCTGAAACATCTACAAACGCTAGACAGCCg ] [+] EMBL CD180233 [ GTTTATTCAGTAAAGGACACATACGGTCTGAAGTGGCCGGTTCATGATTGGTTTCAATCATCATGTGTCAGTGATTCAGATGAAGTTATCAAAAGCAACTTACTTGAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCAGTCGACAAACTAAATCAACGCCTTTCATTTATAAAGGAAGAGTTCAATGAGATGGACTTGAAATCGGAGCCGTTAAACGATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACCGTTTCATTATCTTTTTGTTCTTCTGAAACATCTACTAACGCTAGACAACCTACAATGATAGCATCACTGCGATTTCAGCTCAGTACATTACAAAAGGAAAAATTGTCTGATATTCGACAGATCGTAAAAATTCTAAGCCGTTA ] [-] EMBL CD119253 [ TCAATCATCATGTGTCAGTGATTCAGATGAAGTTATCAAAAGCAACTTACTTGAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCAGTCGACAAACTAAATCAACGCCTTTCATTTATAAAGGAAGAGTTCAATGAGATGGACTTGAAATCGGAGCCGTTAAACGATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACTGTTTCATTATCTTTTTGTTCTTCTGAAACATCTACTAACGCTAGACAACCTACAATGATAGCATCACTGCGATTTCAGCTCAGTACATTACAAAAGGAAAAATTGTCTGATATTCGACAGATCGTAAAAATTCTAAGCCGTTATGATTCTATTCGACTCAATTTACTACG ] [-] EMBL CD119087 [ GAACTTGTTAAAAGCGATCTTACTTCTGCGGAGTTAGCGGTCGACAAACTAAATCAACGCCTTTCATTTATAAAGGAAGGGTTCAATGAGATGGACTTGAAATCGGAGCCGTTAAACGATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACTGTTTCATTATCTTTTTGTTCTTCTGAAACATCTACTAACGCTAGACAACCTACAATGATAGCATCACTGCGATTTCAGCTCAGTACATTACAAAAGGAAAAATTGTCTGATATTCGACAGATCGTAAAAATTCTAAGCCGTTATGATTCTATTCGACTCAATTTACTACG ] [-] EMBL CD180178 [ CAGTCGACAAACTAAATCAACGCCTTTCATTTATAAAGGAAGAGTTCAATGAGATGGACTTGAAATCGGAGCCGTTAAACGATGTTAGCTCTAATCGATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACTGTTTCATTATCTTTTTGTTCTTCTGAAACATCTACTAACGCTAGACAACCCACAATGATAGCATCA ] [-] EMBL CD157416 [ ATGTTAGCTCTAATCAATCATTATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACTGTTTCATTATCTTTTTGTTCTTCTGAAACATCTACTAACGCTAGACAACCTACAATGATAGCATCACTGCGATTTCAGCTCAGTACATTACAAAAGGAAAAATTGTCTGATATTCGACAGATCGTAAAAATTCTAAGCCGTTATGATTCTATTCGACTCAATTTACTACGTTCCGATCAGATGTCGCTCAGTGAAACATGTACTACATCCCTCTGGA] [-] EMBL CD157464 [ ATGTTAGCTCTAATCAATCATGATCACCAGTAGTAATTTCAAAAAGAGTTAATCGCAACCCACAATCTTGTCGCTTAACAGCACTTCCTACCTCACAGCCAACTGTTTCATTATCTTTTTGTTCTTCTGAAACATCTACTAACGCTAGACAACCTACAATGATAGCATCACTGCGATTTCAGCTCAGTACATTACAAAAGGAAAAATTGTCTGATATTCGACAGATCGTAAAAATTCTAAGCCGTTATGATTCTATTCGACTCAATTTACTACGTTCCGATCAGATGTCGCTCAGTGAAACATGTACTACATCCCTCTGGA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||